AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0873880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0873880 MtrunA17_Chr6g0454761 97.143 455 13 0 1 455 491 945 0.0 905
Msa0873880 MtrunA17_Chr6g0454761 79.470 453 86 2 6 455 9 457 0.0 736
Msa0873880 MtrunA17_Chr6g0455341 58.120 468 178 9 1 455 1 463 0.0 526
Msa0873880 MtrunA17_Chr6g0455361 59.817 438 167 7 21 455 29 460 0.0 519
Msa0873880 MtrunA17_Chr6g0455351 51.293 464 174 9 3 455 6 428 4.69e-151 436
Msa0873880 MtrunA17_Chr7g0219331 46.320 462 229 11 6 454 98 553 9.96e-141 414
Msa0873880 MtrunA17_Chr7g0219301 46.004 463 232 11 1 451 1 457 1.64e-135 411
Msa0873880 MtrunA17_Chr7g0219301 43.969 257 136 5 202 454 631 883 5.72e-60 210
Msa0873880 MtrunA17_Chr7g0219301 45.361 97 52 1 22 118 533 628 2.67e-22 100
Msa0873880 MtrunA17_Chr7g0219291 43.478 460 246 8 6 452 357 815 1.16e-113 353
Msa0873880 MtrunA17_Chr7g0219291 37.676 284 163 7 167 439 35 315 2.71e-48 177
Msa0873880 MtrunA17_Chr6g0454741 90.341 176 17 0 72 247 20 195 1.07e-112 331
Msa0873880 MtrunA17_Chr6g0454741 70.149 67 14 2 364 430 177 237 6.87e-22 94.4
Msa0873880 MtrunA17_Chr7g0219241 41.631 466 251 9 6 452 10 473 2.19e-112 339
Msa0873880 MtrunA17_Chr7g0219181 40.254 472 256 11 6 454 9 477 3.19e-107 326
Msa0873880 MtrunA17_Chr7g0219121 39.368 475 263 10 2 452 4 477 1.09e-105 322
Msa0873880 MtrunA17_Chr2g0323511 33.696 460 276 7 19 455 32 485 1.55e-76 247
Msa0873880 MtrunA17_Chr7g0219101 33.262 469 244 9 6 452 9 430 2.05e-75 242
Msa0873880 MtrunA17_Chr2g0323471 33.110 447 273 8 22 452 41 477 3.05e-69 228
Msa0873880 MtrunA17_Chr8g0339641 34.273 461 271 11 21 455 21 475 1.45e-66 221
Msa0873880 MtrunA17_Chr3g0087901 31.659 458 285 10 19 455 17 467 3.05e-65 217
Msa0873880 MtrunA17_Chr2g0323501 31.106 479 294 12 1 455 12 478 1.97e-64 215
Msa0873880 MtrunA17_Chr2g0323481 32.045 440 262 12 39 455 39 464 3.10e-63 211
Msa0873880 MtrunA17_Chr2g0323421 31.034 464 274 13 19 455 68 512 2.72e-62 210
Msa0873880 MtrunA17_Chr3g0124341 31.106 479 291 13 2 453 7 473 6.94e-60 203
Msa0873880 MtrunA17_Chr7g0219211 38.828 273 156 5 6 268 10 281 1.14e-56 191
Msa0873880 MtrunA17_Chr7g0219351 42.986 221 115 5 72 284 14 231 6.97e-55 182
Msa0873880 MtrunA17_Chr3g0083761 30.608 477 283 15 7 455 8 464 8.10e-51 179
Msa0873880 MtrunA17_Chr7g0219881 30.913 482 273 15 1 448 1 456 4.22e-49 174
Msa0873880 MtrunA17_Chr7g0219191 45.685 197 103 3 16 208 9 205 2.51e-48 165
Msa0873880 MtrunA17_Chr7g0219341 48.344 151 76 2 305 454 3 152 4.11e-44 151
Msa0873880 MtrunA17_Chr7g0219251 46.988 166 85 2 6 168 8 173 1.57e-41 145
Msa0873880 MtrunA17_Chr7g0219221 41.401 157 91 1 297 452 2 158 2.29e-34 126
Msa0873880 MtrunA17_Chr7g0219311 42.568 148 83 2 291 437 1 147 2.20e-33 123
Msa0873880 MtrunA17_Chr7g0219201 39.062 192 112 3 266 452 11 202 4.51e-33 124
Msa0873880 MtrunA17_Chr3g0092011 31.317 281 169 10 4 270 2 272 5.78e-32 123
Msa0873880 MtrunA17_Chr2g0323441 40.764 157 83 4 21 168 20 175 3.88e-24 99.0
Msa0873880 MtrunA17_Chr8g0374641 24.638 414 250 17 60 445 56 435 1.90e-19 90.5
Msa0873880 MtrunA17_Chr8g0359251 27.523 327 184 13 140 455 147 431 3.42e-19 89.7
Msa0873880 MtrunA17_Chr4g0053111 26.367 311 200 11 140 445 152 438 3.53e-19 89.7
Msa0873880 MtrunA17_Chr4g0053091 25.113 442 256 14 31 445 32 425 2.27e-18 87.0
Msa0873880 MtrunA17_Chr3g0132001 25.079 315 206 10 140 449 144 433 9.72e-18 85.1
Msa0873880 MtrunA17_Chr2g0334001 21.934 424 281 14 42 448 39 429 2.19e-17 84.0
Msa0873880 MtrunA17_Chr4g0053081 23.112 437 250 16 50 445 45 436 3.72e-17 83.6
Msa0873880 MtrunA17_Chr3g0087221 26.047 430 269 19 38 445 36 438 4.66e-17 83.2
Msa0873880 MtrunA17_Chr4g0072041 23.632 457 290 16 31 452 28 460 1.12e-16 82.0
Msa0873880 MtrunA17_Chr4g0053061 24.190 401 251 16 29 407 60 429 1.13e-16 82.0
Msa0873880 MtrunA17_Chr7g0224131 25.686 401 247 15 23 404 21 389 1.76e-16 81.3
Msa0873880 MtrunA17_Chr3g0092001 33.913 115 73 2 341 455 9 120 2.28e-16 75.1
Msa0873880 MtrunA17_Chr7g0253541 20.964 477 327 15 7 455 6 460 7.72e-16 79.7
Msa0873880 MtrunA17_Chr8g0374911 23.691 401 253 16 29 407 53 422 7.76e-16 79.7
Msa0873880 MtrunA17_Chr4g0010381 25.786 318 199 14 140 445 138 430 5.65e-15 76.6
Msa0873880 MtrunA17_Chr2g0311401 21.807 321 210 9 143 448 5 299 1.97e-14 73.9
Msa0873880 MtrunA17_Chr7g0252731 27.106 273 145 10 143 405 151 379 2.10e-14 75.1
Msa0873880 MtrunA17_Chr4g0010311 25.000 276 181 8 140 407 138 395 1.29e-13 72.4
Msa0873880 MtrunA17_Chr2g0323491 45.714 70 38 0 386 455 11 80 1.95e-13 65.9
Msa0873880 MtrunA17_Chr3g0134071 23.810 420 253 15 55 444 62 444 5.22e-13 70.9
Msa0873880 MtrunA17_Chr5g0408911 24.824 427 266 19 20 428 35 424 5.91e-13 70.5
Msa0873880 MtrunA17_Chr8g0376901 23.676 321 199 9 139 444 131 420 1.39e-12 69.3
Msa0873880 MtrunA17_Chr7g0253531 22.222 477 320 16 9 455 5 460 3.33e-12 68.2
Msa0873880 MtrunA17_Chr3g0113181 25.182 413 263 20 58 441 61 456 4.34e-12 67.8
Msa0873880 MtrunA17_Chr3g0134091 24.460 417 271 18 42 441 47 436 6.20e-12 67.4
Msa0873880 MtrunA17_Chr4g0054081 22.792 351 235 12 122 452 122 456 8.71e-12 67.0
Msa0873880 MtrunA17_Chr8g0353901 25.121 207 140 8 248 445 22 222 6.59e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0873880 AT5G39090.1 36.842 456 249 10 14 453 16 448 7.16e-94 291
Msa0873880 AT5G39050.1 38.608 474 259 13 1 453 6 468 5.44e-93 289
Msa0873880 AT3G29635.1 37.472 443 252 10 23 453 26 455 1.39e-92 288
Msa0873880 AT5G39080.1 33.833 467 280 12 1 448 1 457 1.86e-87 275
Msa0873880 AT3G29670.1 36.092 435 264 7 24 454 27 451 4.45e-87 273
Msa0873880 AT3G29680.1 36.054 441 270 7 17 453 16 448 1.70e-86 272
Msa0873880 AT5G61160.1 34.279 458 275 12 6 450 4 448 1.98e-83 264
Msa0873880 AT3G29590.1 34.430 456 255 13 19 453 17 449 6.25e-80 255
Msa0873880 AT1G03940.1 30.983 468 271 14 16 453 20 465 1.22e-57 197
Msa0873880 AT1G03495.1 31.498 327 194 11 22 331 26 339 8.98e-34 130
Msa0873880 AT3G29690.1 36.196 163 94 3 293 454 27 180 1.02e-25 103
Msa0873880 AT3G29720.1 34.211 190 104 7 100 282 26 201 1.02e-20 90.9
Msa0873880 AT5G57840.1 23.235 340 229 10 127 452 117 438 2.52e-18 87.4
Msa0873880 AT2G19070.1 22.902 441 287 18 39 452 37 451 3.14e-17 84.3
Msa0873880 AT5G07850.1 25.060 419 273 15 42 444 49 442 7.79e-16 80.1
Msa0873880 AT3G48720.1 21.831 426 279 14 39 448 41 428 1.22e-14 76.3
Msa0873880 AT5G41040.2 22.857 315 216 9 141 450 148 440 1.94e-14 75.5
Msa0873880 AT5G41040.1 22.857 315 216 9 141 450 164 456 2.57e-14 75.1
Msa0873880 AT5G38130.1 25.163 306 194 10 140 437 165 443 1.08e-12 70.1
Msa0873880 AT3G50270.1 29.448 163 107 5 248 404 237 397 1.15e-11 67.0

Find 88 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTAATGCAAATTATTT+TGG 0.083055 6_1:-9504408 Msa0873880:CDS
CCAAAATAATTTGCATTAAT+TGG 0.091109 6_1:+9504408 None:intergenic
CACAAAGATTTGAACATAAA+AGG 0.188006 6_1:+9505018 None:intergenic
TCAAAAGGGTGGTTGAATTT+TGG 0.191612 6_1:-9504708 Msa0873880:CDS
AAAGGTACCTTGTTGGATTT+TGG 0.196421 6_1:+9504468 None:intergenic
GAAGTAACATCAACTTTCTT+AGG 0.241380 6_1:+9504144 None:intergenic
ATTTGATTCAGCTACAATTA+AGG 0.243376 6_1:+9505052 None:intergenic
GGAAACAATTAATACAATAA+AGG 0.263896 6_1:-9504652 Msa0873880:CDS
ATCTTGAGGTAAGGACAAAA+AGG 0.294994 6_1:+9504791 None:intergenic
CCCTATAGGGTCTCTTATAA+TGG 0.299424 6_1:+9504746 None:intergenic
TTTGATTCAGCTACAATTAA+GGG 0.310052 6_1:+9505053 None:intergenic
TGTTGTGTCAAAATTAGTTT+TGG 0.315208 6_1:-9504379 Msa0873880:CDS
AGTTACTTGTGCTTATTTGT+TGG 0.323900 6_1:-9504514 Msa0873880:CDS
TGTTGAAGGGTTTGGAGAAT+TGG 0.328116 6_1:-9504269 Msa0873880:CDS
TCAAGGGAGTGTTTGAGATT+TGG 0.333149 6_1:+9505173 None:intergenic
GTGTTGAAGGGTTTGGAAAA+TGG 0.338259 6_1:-9504294 Msa0873880:CDS
TAAATCTCATTTATCCCTAT+AGG 0.339393 6_1:+9504732 None:intergenic
CACTTTCTTTGACACACTTT+GGG 0.343151 6_1:-9505276 Msa0873880:CDS
TAATCGAAGCTTGAAGGTTT+GGG 0.348105 6_1:-9504673 Msa0873880:CDS
ATAATCGAAGCTTGAAGGTT+TGG 0.353389 6_1:-9504674 Msa0873880:CDS
ACACACCATGCAGCTGTTGA+TGG 0.380958 6_1:-9504879 Msa0873880:CDS
CAACTTTGTTCATGAAAGCT+TGG 0.385589 6_1:-9504848 Msa0873880:CDS
CTAGGGACATAGTTGATGAT+AGG 0.385902 6_1:+9505086 None:intergenic
GTGTTTGAGATTTGGAAGAA+TGG 0.387150 6_1:+9505181 None:intergenic
GGCTTTGAACAAACAACAAA+TGG 0.391256 6_1:-9504052 Msa0873880:CDS
TGTGGATTGTAGGCCACGTT+TGG 0.395299 6_1:-9504436 Msa0873880:CDS
CCATTATAAGAGACCCTATA+GGG 0.397065 6_1:-9504746 Msa0873880:CDS
CATGTGAAATCTCCAAAGTT+GGG 0.400447 6_1:+9504970 None:intergenic
TCATGTGAAATCTCCAAAGT+TGG 0.401690 6_1:+9504969 None:intergenic
TCACTTTCTTTGACACACTT+TGG 0.401849 6_1:-9505277 Msa0873880:CDS
AACCACTTCCTCCTTCTTGT+TGG 0.407332 6_1:-9505140 Msa0873880:CDS
ACAATACTTGATCCCAACTT+TGG 0.412297 6_1:-9504982 Msa0873880:CDS
AAATCTCATTTATCCCTATA+GGG 0.418843 6_1:+9504733 None:intergenic
TAAATGAGATTTATTCAAAA+GGG 0.420073 6_1:-9504722 Msa0873880:CDS
GTTACTTCTATTGACAAAAC+AGG 0.421948 6_1:-9504129 Msa0873880:CDS
ATCTAACACCTTTCTTTGAT+AGG 0.425067 6_1:-9504770 Msa0873880:CDS
AACAAATAATCGAAGCTTGA+AGG 0.430495 6_1:-9504679 Msa0873880:CDS
GAAACAATTAATACAATAAA+GGG 0.431068 6_1:-9504651 Msa0873880:CDS
AAAGTGAAGGGAAAAGTAGT+TGG 0.438716 6_1:+9505293 None:intergenic
ATAAATGAGATTTATTCAAA+AGG 0.440088 6_1:-9504723 Msa0873880:CDS
AATGATGGTGGAATTGAGAT+TGG 0.442831 6_1:-9504078 Msa0873880:CDS
AAATGGTGTGTTGAAGGGTT+TGG 0.446123 6_1:-9504277 Msa0873880:CDS
AAGTGATGTGTTGAAGGGTT+TGG 0.446481 6_1:-9504301 Msa0873880:CDS
TAGAAGAACAAACGTTCAAC+TGG 0.451960 6_1:+9505242 None:intergenic
AGTGGTTGAGTGTAAGTTCA+AGG 0.453955 6_1:+9505156 None:intergenic
AAGTGAAGGGAAAAGTAGTT+GGG 0.454010 6_1:+9505294 None:intergenic
CCAATACAAAATCCATGGTT+AGG 0.454240 6_1:+9504909 None:intergenic
AAATAATTTGCATTAATTGG+TGG 0.462390 6_1:+9504411 None:intergenic
TCCATTATAAGAGACCCTAT+AGG 0.464997 6_1:-9504747 Msa0873880:CDS
CTACAATGAGTGAGACAGAT+AGG 0.476438 6_1:-9504230 Msa0873880:CDS
AGGGATAAGTGATGTGTTGA+AGG 0.478909 6_1:-9504307 Msa0873880:CDS
TTTGGAAAATGGTGTGTTGA+AGG 0.486429 6_1:-9504283 Msa0873880:CDS
TTTCTATTGCCGGGTCACCT+AGG 0.512616 6_1:-9504203 Msa0873880:CDS
ATGAGATTTATTCAAAAGGG+TGG 0.512779 6_1:-9504719 Msa0873880:CDS
TGGTGGAATTGAGATTGGTT+TGG 0.524781 6_1:-9504073 Msa0873880:CDS
GGATTTGATAGTGCTCTTGA+AGG 0.525011 6_1:-9504327 Msa0873880:CDS
AAGAAAGGTGTTAGATCTTG+AGG 0.528202 6_1:+9504777 None:intergenic
TTGGAAAATGGTGTGTTGAA+GGG 0.530378 6_1:-9504282 Msa0873880:CDS
TAGGGACATAGTTGATGATA+GGG 0.535295 6_1:+9505087 None:intergenic
TCGGAGAATAAGAATAATGA+TGG 0.536773 6_1:-9504093 Msa0873880:CDS
ATAATGGACCTATCAAAGAA+AGG 0.539512 6_1:+9504762 None:intergenic
GAGAATAAGAATAATGATGG+TGG 0.545768 6_1:-9504090 Msa0873880:CDS
GATTTGATAGTGCTCTTGAA+GGG 0.554807 6_1:-9504326 Msa0873880:CDS
TACCAACAAGAAGGAGGAAG+TGG 0.558114 6_1:+9505138 None:intergenic
AGGTGTTAGATCTTGAGGTA+AGG 0.574815 6_1:+9504782 None:intergenic
TTCTTGTTGGTAACATCACA+TGG 0.577548 6_1:-9505127 Msa0873880:CDS
AAGAACAAACGTTCAACTGG+TGG 0.580223 6_1:+9505245 None:intergenic
TTTGAACAAACAACAAATGG+AGG 0.581239 6_1:-9504049 Msa0873880:CDS
GTGGTTGAGTGTAAGTTCAA+GGG 0.582354 6_1:+9505157 None:intergenic
AAACTATAAACGTCAAACCT+AGG 0.585494 6_1:+9504186 None:intergenic
AGTGAAGGGAAAAGTAGTTG+GGG 0.590094 6_1:+9505295 None:intergenic
TTATACCAATACAAAATCCA+TGG 0.591024 6_1:+9504904 None:intergenic
AACGTCAAACCTAGGTGACC+CGG 0.598814 6_1:+9504194 None:intergenic
GAAGGGAAAAGTAGTTGGGG+GGG 0.598975 6_1:+9505298 None:intergenic
AAGTGTGTCAAAGAAAGTGA+AGG 0.603639 6_1:+9505280 None:intergenic
ATTAAGGGAATAGAATCACT+AGG 0.605868 6_1:+9505068 None:intergenic
AGTGTGTCAAAGAAAGTGAA+GGG 0.609596 6_1:+9505281 None:intergenic
GGGATAAGTGATGTGTTGAA+GGG 0.612234 6_1:-9504306 Msa0873880:CDS
ATGTGATGTTACCAACAAGA+AGG 0.622511 6_1:+9505129 None:intergenic
ATAAAGGGTGAAGCAATCAA+AGG 0.633498 6_1:-9504636 Msa0873880:CDS
TGATGTTACCAACAAGAAGG+AGG 0.651029 6_1:+9505132 None:intergenic
TTAAGGGAATAGAATCACTA+GGG 0.654848 6_1:+9505069 None:intergenic
TGAAGGGAAAAGTAGTTGGG+GGG 0.663109 6_1:+9505297 None:intergenic
TTAATTGGTGGATCCAAACG+TGG 0.667330 6_1:+9504423 None:intergenic
ATAGGGTGTGGTGAATCTTG+TGG 0.670242 6_1:+9505104 None:intergenic
GTGAAGGGAAAAGTAGTTGG+GGG 0.672274 6_1:+9505296 None:intergenic
ACATAGTTGATGATAGGGTG+TGG 0.685311 6_1:+9505092 None:intergenic
TGACCAACCAAAATCCAACA+AGG 0.709340 6_1:-9504475 Msa0873880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATGAGATTTATTCAAA+AGG - chr6_1:9504638-9504657 Msa0873880:CDS 15.0%
!! TAAATGAGATTTATTCAAAA+GGG - chr6_1:9504639-9504658 Msa0873880:CDS 15.0%
!! GAAACAATTAATACAATAAA+GGG - chr6_1:9504710-9504729 Msa0873880:CDS 15.0%
!! ATAAATGAGATTTATTCAAA+AGG - chr6_1:9504638-9504657 Msa0873880:CDS 15.0%
!! TAAATGAGATTTATTCAAAA+GGG - chr6_1:9504639-9504658 Msa0873880:CDS 15.0%
!! GAAACAATTAATACAATAAA+GGG - chr6_1:9504710-9504729 Msa0873880:CDS 15.0%
!! AATGGAATCAAAGAAAAAAT+TGG + chr6_1:9504165-9504184 None:intergenic 20.0%
!! GGAAACAATTAATACAATAA+AGG - chr6_1:9504709-9504728 Msa0873880:CDS 20.0%
!!! CTTGTTATTTTTTTCAATCT+TGG + chr6_1:9504804-9504823 None:intergenic 20.0%
!! CAAGATTGAAAAAAATAACA+AGG - chr6_1:9504802-9504821 Msa0873880:CDS 20.0%
!!! AAATAATTTGCATTAATTGG+TGG + chr6_1:9504953-9504972 None:intergenic 20.0%
!!! CCAAAATAATTTGCATTAAT+TGG + chr6_1:9504956-9504975 None:intergenic 20.0%
!!! CCAATTAATGCAAATTATTT+TGG - chr6_1:9504953-9504972 Msa0873880:CDS 20.0%
!!! ATCATCTTTAAAAAATTCCT+CGG + chr6_1:9505014-9505033 None:intergenic 20.0%
!!! TTTATAGTTTTGATTTTGGA+TGG - chr6_1:9505188-9505207 Msa0873880:CDS 20.0%
!!! TTATAGTTTTGATTTTGGAT+GGG - chr6_1:9505189-9505208 Msa0873880:CDS 20.0%
!! AATGGAATCAAAGAAAAAAT+TGG + chr6_1:9504165-9504184 None:intergenic 20.0%
!! GGAAACAATTAATACAATAA+AGG - chr6_1:9504709-9504728 Msa0873880:CDS 20.0%
!!! CTTGTTATTTTTTTCAATCT+TGG + chr6_1:9504804-9504823 None:intergenic 20.0%
!! CAAGATTGAAAAAAATAACA+AGG - chr6_1:9504802-9504821 Msa0873880:CDS 20.0%
!!! AAATAATTTGCATTAATTGG+TGG + chr6_1:9504953-9504972 None:intergenic 20.0%
!!! CCAAAATAATTTGCATTAAT+TGG + chr6_1:9504956-9504975 None:intergenic 20.0%
!!! CCAATTAATGCAAATTATTT+TGG - chr6_1:9504953-9504972 Msa0873880:CDS 20.0%
!!! ATCATCTTTAAAAAATTCCT+CGG + chr6_1:9505014-9505033 None:intergenic 20.0%
!!! TTTATAGTTTTGATTTTGGA+TGG - chr6_1:9505188-9505207 Msa0873880:CDS 20.0%
!!! TTATAGTTTTGATTTTGGAT+GGG - chr6_1:9505189-9505208 Msa0873880:CDS 20.0%
! GAAAAAATTGGTAGACAAAT+TGG + chr6_1:9504153-9504172 None:intergenic 25.0%
! TTTGATTCAGCTACAATTAA+GGG + chr6_1:9504311-9504330 None:intergenic 25.0%
! ATTTGATTCAGCTACAATTA+AGG + chr6_1:9504312-9504331 None:intergenic 25.0%
! CACAAAGATTTGAACATAAA+AGG + chr6_1:9504346-9504365 None:intergenic 25.0%
! TTATACCAATACAAAATCCA+TGG + chr6_1:9504460-9504479 None:intergenic 25.0%
!!! AAAAGGGTGTATTTTTTTCA+AGG + chr6_1:9504556-9504575 None:intergenic 25.0%
! AAATCTCATTTATCCCTATA+GGG + chr6_1:9504631-9504650 None:intergenic 25.0%
! TAAATCTCATTTATCCCTAT+AGG + chr6_1:9504632-9504651 None:intergenic 25.0%
!!! TATTTTTCAATTGTCACCTT+TGG - chr6_1:9504748-9504767 Msa0873880:CDS 25.0%
!! TTAAGCTTTTGAATATCCAA+AGG + chr6_1:9504767-9504786 None:intergenic 25.0%
!!! AAAAATAAAAGGTACCTTGT+TGG + chr6_1:9504903-9504922 None:intergenic 25.0%
! CAATCCACACTAAAAATAAA+AGG + chr6_1:9504914-9504933 None:intergenic 25.0%
!!! TTATTTTTAGTGTGGATTGT+AGG - chr6_1:9504915-9504934 Msa0873880:CDS 25.0%
!!! TGTTGTGTCAAAATTAGTTT+TGG - chr6_1:9504982-9505001 Msa0873880:CDS 25.0%
!!! GTTGTGTCAAAATTAGTTTT+GGG - chr6_1:9504983-9505002 Msa0873880:CDS 25.0%
!!! GAGGAATTTTTTAAAGATGA+TGG - chr6_1:9505013-9505032 Msa0873880:CDS 25.0%
!!! GACGTTTATAGTTTTGATTT+TGG - chr6_1:9505184-9505203 Msa0873880:CDS 25.0%
!!! TATAGTTTTGATTTTGGATG+GGG - chr6_1:9505190-9505209 Msa0873880:CDS 25.0%
! GAAAAAATTGGTAGACAAAT+TGG + chr6_1:9504153-9504172 None:intergenic 25.0%
! TTTGATTCAGCTACAATTAA+GGG + chr6_1:9504311-9504330 None:intergenic 25.0%
! ATTTGATTCAGCTACAATTA+AGG + chr6_1:9504312-9504331 None:intergenic 25.0%
! CACAAAGATTTGAACATAAA+AGG + chr6_1:9504346-9504365 None:intergenic 25.0%
! TTATACCAATACAAAATCCA+TGG + chr6_1:9504460-9504479 None:intergenic 25.0%
!!! AAAAGGGTGTATTTTTTTCA+AGG + chr6_1:9504556-9504575 None:intergenic 25.0%
! AAATCTCATTTATCCCTATA+GGG + chr6_1:9504631-9504650 None:intergenic 25.0%
! TAAATCTCATTTATCCCTAT+AGG + chr6_1:9504632-9504651 None:intergenic 25.0%
!!! TATTTTTCAATTGTCACCTT+TGG - chr6_1:9504748-9504767 Msa0873880:CDS 25.0%
!! TTAAGCTTTTGAATATCCAA+AGG + chr6_1:9504767-9504786 None:intergenic 25.0%
!!! AAAAATAAAAGGTACCTTGT+TGG + chr6_1:9504903-9504922 None:intergenic 25.0%
! CAATCCACACTAAAAATAAA+AGG + chr6_1:9504914-9504933 None:intergenic 25.0%
!!! TTATTTTTAGTGTGGATTGT+AGG - chr6_1:9504915-9504934 Msa0873880:CDS 25.0%
!!! TGTTGTGTCAAAATTAGTTT+TGG - chr6_1:9504982-9505001 Msa0873880:CDS 25.0%
!!! GTTGTGTCAAAATTAGTTTT+GGG - chr6_1:9504983-9505002 Msa0873880:CDS 25.0%
!!! GAGGAATTTTTTAAAGATGA+TGG - chr6_1:9505013-9505032 Msa0873880:CDS 25.0%
!!! GACGTTTATAGTTTTGATTT+TGG - chr6_1:9505184-9505203 Msa0873880:CDS 25.0%
!!! TATAGTTTTGATTTTGGATG+GGG - chr6_1:9505190-9505209 Msa0873880:CDS 25.0%
TTAAGGGAATAGAATCACTA+GGG + chr6_1:9504295-9504314 None:intergenic 30.0%
ATTAAGGGAATAGAATCACT+AGG + chr6_1:9504296-9504315 None:intergenic 30.0%
ATCTAACACCTTTCTTTGAT+AGG - chr6_1:9504591-9504610 Msa0873880:CDS 30.0%
!! ATAATGGACCTATCAAAGAA+AGG + chr6_1:9504602-9504621 None:intergenic 30.0%
ATGAGATTTATTCAAAAGGG+TGG - chr6_1:9504642-9504661 Msa0873880:CDS 30.0%
AACAAATAATCGAAGCTTGA+AGG - chr6_1:9504682-9504701 Msa0873880:CDS 30.0%
AGTTACTTGTGCTTATTTGT+TGG - chr6_1:9504847-9504866 Msa0873880:CDS 30.0%
!!! GGTACCTTTTATTTTTAGTG+TGG - chr6_1:9504907-9504926 Msa0873880:CDS 30.0%
! GATAGGATATTTTCTATTGC+CGG - chr6_1:9505148-9505167 Msa0873880:CDS 30.0%
! ATAGGATATTTTCTATTGCC+GGG - chr6_1:9505149-9505168 Msa0873880:CDS 30.0%
AAACTATAAACGTCAAACCT+AGG + chr6_1:9505178-9505197 None:intergenic 30.0%
GAAGTAACATCAACTTTCTT+AGG + chr6_1:9505220-9505239 None:intergenic 30.0%
GTTACTTCTATTGACAAAAC+AGG - chr6_1:9505232-9505251 Msa0873880:CDS 30.0%
TCGGAGAATAAGAATAATGA+TGG - chr6_1:9505268-9505287 Msa0873880:CDS 30.0%
GAGAATAAGAATAATGATGG+TGG - chr6_1:9505271-9505290 Msa0873880:CDS 30.0%
TTTGAACAAACAACAAATGG+AGG - chr6_1:9505312-9505331 Msa0873880:CDS 30.0%
! TTTGCTCAACTTTTTGTTCA+AGG - chr6_1:9505337-9505356 Msa0873880:CDS 30.0%
TTAAGGGAATAGAATCACTA+GGG + chr6_1:9504295-9504314 None:intergenic 30.0%
ATTAAGGGAATAGAATCACT+AGG + chr6_1:9504296-9504315 None:intergenic 30.0%
ATCTAACACCTTTCTTTGAT+AGG - chr6_1:9504591-9504610 Msa0873880:CDS 30.0%
!! ATAATGGACCTATCAAAGAA+AGG + chr6_1:9504602-9504621 None:intergenic 30.0%
ATGAGATTTATTCAAAAGGG+TGG - chr6_1:9504642-9504661 Msa0873880:CDS 30.0%
AACAAATAATCGAAGCTTGA+AGG - chr6_1:9504682-9504701 Msa0873880:CDS 30.0%
AGTTACTTGTGCTTATTTGT+TGG - chr6_1:9504847-9504866 Msa0873880:CDS 30.0%
!!! GGTACCTTTTATTTTTAGTG+TGG - chr6_1:9504907-9504926 Msa0873880:CDS 30.0%
! GATAGGATATTTTCTATTGC+CGG - chr6_1:9505148-9505167 Msa0873880:CDS 30.0%
! ATAGGATATTTTCTATTGCC+GGG - chr6_1:9505149-9505168 Msa0873880:CDS 30.0%
AAACTATAAACGTCAAACCT+AGG + chr6_1:9505178-9505197 None:intergenic 30.0%
GAAGTAACATCAACTTTCTT+AGG + chr6_1:9505220-9505239 None:intergenic 30.0%
GTTACTTCTATTGACAAAAC+AGG - chr6_1:9505232-9505251 Msa0873880:CDS 30.0%
TCGGAGAATAAGAATAATGA+TGG - chr6_1:9505268-9505287 Msa0873880:CDS 30.0%
GAGAATAAGAATAATGATGG+TGG - chr6_1:9505271-9505290 Msa0873880:CDS 30.0%
TTTGAACAAACAACAAATGG+AGG - chr6_1:9505312-9505331 Msa0873880:CDS 30.0%
! TTTGCTCAACTTTTTGTTCA+AGG - chr6_1:9505337-9505356 Msa0873880:CDS 30.0%
AAGTGAAGGGAAAAGTAGTT+GGG + chr6_1:9504070-9504089 None:intergenic 35.0%
AAAGTGAAGGGAAAAGTAGT+TGG + chr6_1:9504071-9504090 None:intergenic 35.0%
AGTGTGTCAAAGAAAGTGAA+GGG + chr6_1:9504083-9504102 None:intergenic 35.0%
AAGTGTGTCAAAGAAAGTGA+AGG + chr6_1:9504084-9504103 None:intergenic 35.0%
TCACTTTCTTTGACACACTT+TGG - chr6_1:9504084-9504103 Msa0873880:CDS 35.0%
CACTTTCTTTGACACACTTT+GGG - chr6_1:9504085-9504104 Msa0873880:CDS 35.0%
TAGAAGAACAAACGTTCAAC+TGG + chr6_1:9504122-9504141 None:intergenic 35.0%
! GTGTTTGAGATTTGGAAGAA+TGG + chr6_1:9504183-9504202 None:intergenic 35.0%
ATGTGATGTTACCAACAAGA+AGG + chr6_1:9504235-9504254 None:intergenic 35.0%
!! TTCTTGTTGGTAACATCACA+TGG - chr6_1:9504234-9504253 Msa0873880:CDS 35.0%
!! TAGGGACATAGTTGATGATA+GGG + chr6_1:9504277-9504296 None:intergenic 35.0%
ACAATACTTGATCCCAACTT+TGG - chr6_1:9504379-9504398 Msa0873880:CDS 35.0%
CATGTGAAATCTCCAAAGTT+GGG + chr6_1:9504394-9504413 None:intergenic 35.0%
TCATGTGAAATCTCCAAAGT+TGG + chr6_1:9504395-9504414 None:intergenic 35.0%
CCAATACAAAATCCATGGTT+AGG + chr6_1:9504455-9504474 None:intergenic 35.0%
! CCTAACCATGGATTTTGTAT+TGG - chr6_1:9504452-9504471 Msa0873880:CDS 35.0%
CAACTTTGTTCATGAAAGCT+TGG - chr6_1:9504513-9504532 Msa0873880:CDS 35.0%
!!! GGGTGTATTTTTTTCAAGGT+TGG + chr6_1:9504552-9504571 None:intergenic 35.0%
TCTTGAGGTAAGGACAAAAA+GGG + chr6_1:9504572-9504591 None:intergenic 35.0%
ATCTTGAGGTAAGGACAAAA+AGG + chr6_1:9504573-9504592 None:intergenic 35.0%
!! AAGAAAGGTGTTAGATCTTG+AGG + chr6_1:9504587-9504606 None:intergenic 35.0%
TCCATTATAAGAGACCCTAT+AGG - chr6_1:9504614-9504633 Msa0873880:CDS 35.0%
CCATTATAAGAGACCCTATA+GGG - chr6_1:9504615-9504634 Msa0873880:CDS 35.0%
! TCAAAAGGGTGGTTGAATTT+TGG - chr6_1:9504653-9504672 Msa0873880:CDS 35.0%
ATAATCGAAGCTTGAAGGTT+TGG - chr6_1:9504687-9504706 Msa0873880:CDS 35.0%
TAATCGAAGCTTGAAGGTTT+GGG - chr6_1:9504688-9504707 Msa0873880:CDS 35.0%
ATAAAGGGTGAAGCAATCAA+AGG - chr6_1:9504725-9504744 Msa0873880:CDS 35.0%
!!! AAAGGTACCTTGTTGGATTT+TGG + chr6_1:9504896-9504915 None:intergenic 35.0%
!! GATTTGATAGTGCTCTTGAA+GGG - chr6_1:9505035-9505054 Msa0873880:CDS 35.0%
TTTGGAAAATGGTGTGTTGA+AGG - chr6_1:9505078-9505097 Msa0873880:CDS 35.0%
TTGGAAAATGGTGTGTTGAA+GGG - chr6_1:9505079-9505098 Msa0873880:CDS 35.0%
!! AACAGGAGCTTTTTCTCTTT+CGG - chr6_1:9505249-9505268 Msa0873880:CDS 35.0%
!! AATGATGGTGGAATTGAGAT+TGG - chr6_1:9505283-9505302 Msa0873880:CDS 35.0%
!! GGCTTTGAACAAACAACAAA+TGG - chr6_1:9505309-9505328 Msa0873880:CDS 35.0%
AAGTGAAGGGAAAAGTAGTT+GGG + chr6_1:9504070-9504089 None:intergenic 35.0%
AAAGTGAAGGGAAAAGTAGT+TGG + chr6_1:9504071-9504090 None:intergenic 35.0%
AGTGTGTCAAAGAAAGTGAA+GGG + chr6_1:9504083-9504102 None:intergenic 35.0%
AAGTGTGTCAAAGAAAGTGA+AGG + chr6_1:9504084-9504103 None:intergenic 35.0%
TCACTTTCTTTGACACACTT+TGG - chr6_1:9504084-9504103 Msa0873880:CDS 35.0%
CACTTTCTTTGACACACTTT+GGG - chr6_1:9504085-9504104 Msa0873880:CDS 35.0%
TAGAAGAACAAACGTTCAAC+TGG + chr6_1:9504122-9504141 None:intergenic 35.0%
! GTGTTTGAGATTTGGAAGAA+TGG + chr6_1:9504183-9504202 None:intergenic 35.0%
ATGTGATGTTACCAACAAGA+AGG + chr6_1:9504235-9504254 None:intergenic 35.0%
!! TTCTTGTTGGTAACATCACA+TGG - chr6_1:9504234-9504253 Msa0873880:CDS 35.0%
!! TAGGGACATAGTTGATGATA+GGG + chr6_1:9504277-9504296 None:intergenic 35.0%
ACAATACTTGATCCCAACTT+TGG - chr6_1:9504379-9504398 Msa0873880:CDS 35.0%
CATGTGAAATCTCCAAAGTT+GGG + chr6_1:9504394-9504413 None:intergenic 35.0%
TCATGTGAAATCTCCAAAGT+TGG + chr6_1:9504395-9504414 None:intergenic 35.0%
CCAATACAAAATCCATGGTT+AGG + chr6_1:9504455-9504474 None:intergenic 35.0%
! CCTAACCATGGATTTTGTAT+TGG - chr6_1:9504452-9504471 Msa0873880:CDS 35.0%
CAACTTTGTTCATGAAAGCT+TGG - chr6_1:9504513-9504532 Msa0873880:CDS 35.0%
!!! GGGTGTATTTTTTTCAAGGT+TGG + chr6_1:9504552-9504571 None:intergenic 35.0%
TCTTGAGGTAAGGACAAAAA+GGG + chr6_1:9504572-9504591 None:intergenic 35.0%
ATCTTGAGGTAAGGACAAAA+AGG + chr6_1:9504573-9504592 None:intergenic 35.0%
!! AAGAAAGGTGTTAGATCTTG+AGG + chr6_1:9504587-9504606 None:intergenic 35.0%
TCCATTATAAGAGACCCTAT+AGG - chr6_1:9504614-9504633 Msa0873880:CDS 35.0%
CCATTATAAGAGACCCTATA+GGG - chr6_1:9504615-9504634 Msa0873880:CDS 35.0%
! TCAAAAGGGTGGTTGAATTT+TGG - chr6_1:9504653-9504672 Msa0873880:CDS 35.0%
ATAATCGAAGCTTGAAGGTT+TGG - chr6_1:9504687-9504706 Msa0873880:CDS 35.0%
TAATCGAAGCTTGAAGGTTT+GGG - chr6_1:9504688-9504707 Msa0873880:CDS 35.0%
ATAAAGGGTGAAGCAATCAA+AGG - chr6_1:9504725-9504744 Msa0873880:CDS 35.0%
!!! AAAGGTACCTTGTTGGATTT+TGG + chr6_1:9504896-9504915 None:intergenic 35.0%
!! GATTTGATAGTGCTCTTGAA+GGG - chr6_1:9505035-9505054 Msa0873880:CDS 35.0%
TTTGGAAAATGGTGTGTTGA+AGG - chr6_1:9505078-9505097 Msa0873880:CDS 35.0%
TTGGAAAATGGTGTGTTGAA+GGG - chr6_1:9505079-9505098 Msa0873880:CDS 35.0%
!! AACAGGAGCTTTTTCTCTTT+CGG - chr6_1:9505249-9505268 Msa0873880:CDS 35.0%
!! AATGATGGTGGAATTGAGAT+TGG - chr6_1:9505283-9505302 Msa0873880:CDS 35.0%
!! GGCTTTGAACAAACAACAAA+TGG - chr6_1:9505309-9505328 Msa0873880:CDS 35.0%
AGTGAAGGGAAAAGTAGTTG+GGG + chr6_1:9504069-9504088 None:intergenic 40.0%
AAGAACAAACGTTCAACTGG+TGG + chr6_1:9504119-9504138 None:intergenic 40.0%
!! TCAAGGGAGTGTTTGAGATT+TGG + chr6_1:9504191-9504210 None:intergenic 40.0%
GTGGTTGAGTGTAAGTTCAA+GGG + chr6_1:9504207-9504226 None:intergenic 40.0%
AGTGGTTGAGTGTAAGTTCA+AGG + chr6_1:9504208-9504227 None:intergenic 40.0%
TGATGTTACCAACAAGAAGG+AGG + chr6_1:9504232-9504251 None:intergenic 40.0%
!! ACATAGTTGATGATAGGGTG+TGG + chr6_1:9504272-9504291 None:intergenic 40.0%
!! CTAGGGACATAGTTGATGAT+AGG + chr6_1:9504278-9504297 None:intergenic 40.0%
! GTCACTCTTTTTCCTAACCA+TGG - chr6_1:9504440-9504459 Msa0873880:CDS 40.0%
! ATTTTCCATCAACAGCTGCA+TGG + chr6_1:9504490-9504509 None:intergenic 40.0%
AGGTGTTAGATCTTGAGGTA+AGG + chr6_1:9504582-9504601 None:intergenic 40.0%
CCCTATAGGGTCTCTTATAA+TGG + chr6_1:9504618-9504637 None:intergenic 40.0%
! AAAGGGTGGTTGAATTTTGG+TGG - chr6_1:9504656-9504675 Msa0873880:CDS 40.0%
TGACCAACCAAAATCCAACA+AGG - chr6_1:9504886-9504905 Msa0873880:CDS 40.0%
!! GTACCTTGTTGGATTTTGGT+TGG + chr6_1:9504892-9504911 None:intergenic 40.0%
! TTAATTGGTGGATCCAAACG+TGG + chr6_1:9504941-9504960 None:intergenic 40.0%
!!! ATTAGTTTTGGGTGAAACCG+AGG - chr6_1:9504994-9505013 Msa0873880:CDS 40.0%
!! GGATTTGATAGTGCTCTTGA+AGG - chr6_1:9505034-9505053 Msa0873880:CDS 40.0%
AGGGATAAGTGATGTGTTGA+AGG - chr6_1:9505054-9505073 Msa0873880:CDS 40.0%
GGGATAAGTGATGTGTTGAA+GGG - chr6_1:9505055-9505074 Msa0873880:CDS 40.0%
AAGTGATGTGTTGAAGGGTT+TGG - chr6_1:9505060-9505079 Msa0873880:CDS 40.0%
GTGTTGAAGGGTTTGGAAAA+TGG - chr6_1:9505067-9505086 Msa0873880:CDS 40.0%
AAATGGTGTGTTGAAGGGTT+TGG - chr6_1:9505084-9505103 Msa0873880:CDS 40.0%
TGTTGAAGGGTTTGGAGAAT+TGG - chr6_1:9505092-9505111 Msa0873880:CDS 40.0%
CTACAATGAGTGAGACAGAT+AGG - chr6_1:9505131-9505150 Msa0873880:CDS 40.0%
! TGGTGGAATTGAGATTGGTT+TGG - chr6_1:9505288-9505307 Msa0873880:CDS 40.0%
AGTGAAGGGAAAAGTAGTTG+GGG + chr6_1:9504069-9504088 None:intergenic 40.0%
AAGAACAAACGTTCAACTGG+TGG + chr6_1:9504119-9504138 None:intergenic 40.0%
!! TCAAGGGAGTGTTTGAGATT+TGG + chr6_1:9504191-9504210 None:intergenic 40.0%
GTGGTTGAGTGTAAGTTCAA+GGG + chr6_1:9504207-9504226 None:intergenic 40.0%
AGTGGTTGAGTGTAAGTTCA+AGG + chr6_1:9504208-9504227 None:intergenic 40.0%
TGATGTTACCAACAAGAAGG+AGG + chr6_1:9504232-9504251 None:intergenic 40.0%
!! ACATAGTTGATGATAGGGTG+TGG + chr6_1:9504272-9504291 None:intergenic 40.0%
!! CTAGGGACATAGTTGATGAT+AGG + chr6_1:9504278-9504297 None:intergenic 40.0%
! GTCACTCTTTTTCCTAACCA+TGG - chr6_1:9504440-9504459 Msa0873880:CDS 40.0%
! ATTTTCCATCAACAGCTGCA+TGG + chr6_1:9504490-9504509 None:intergenic 40.0%
AGGTGTTAGATCTTGAGGTA+AGG + chr6_1:9504582-9504601 None:intergenic 40.0%
CCCTATAGGGTCTCTTATAA+TGG + chr6_1:9504618-9504637 None:intergenic 40.0%
! AAAGGGTGGTTGAATTTTGG+TGG - chr6_1:9504656-9504675 Msa0873880:CDS 40.0%
TGACCAACCAAAATCCAACA+AGG - chr6_1:9504886-9504905 Msa0873880:CDS 40.0%
!! GTACCTTGTTGGATTTTGGT+TGG + chr6_1:9504892-9504911 None:intergenic 40.0%
! TTAATTGGTGGATCCAAACG+TGG + chr6_1:9504941-9504960 None:intergenic 40.0%
!!! ATTAGTTTTGGGTGAAACCG+AGG - chr6_1:9504994-9505013 Msa0873880:CDS 40.0%
!! GGATTTGATAGTGCTCTTGA+AGG - chr6_1:9505034-9505053 Msa0873880:CDS 40.0%
AGGGATAAGTGATGTGTTGA+AGG - chr6_1:9505054-9505073 Msa0873880:CDS 40.0%
GGGATAAGTGATGTGTTGAA+GGG - chr6_1:9505055-9505074 Msa0873880:CDS 40.0%
AAGTGATGTGTTGAAGGGTT+TGG - chr6_1:9505060-9505079 Msa0873880:CDS 40.0%
GTGTTGAAGGGTTTGGAAAA+TGG - chr6_1:9505067-9505086 Msa0873880:CDS 40.0%
AAATGGTGTGTTGAAGGGTT+TGG - chr6_1:9505084-9505103 Msa0873880:CDS 40.0%
TGTTGAAGGGTTTGGAGAAT+TGG - chr6_1:9505092-9505111 Msa0873880:CDS 40.0%
CTACAATGAGTGAGACAGAT+AGG - chr6_1:9505131-9505150 Msa0873880:CDS 40.0%
! TGGTGGAATTGAGATTGGTT+TGG - chr6_1:9505288-9505307 Msa0873880:CDS 40.0%
TGAAGGGAAAAGTAGTTGGG+GGG + chr6_1:9504067-9504086 None:intergenic 45.0%
GTGAAGGGAAAAGTAGTTGG+GGG + chr6_1:9504068-9504087 None:intergenic 45.0%
AACCACTTCCTCCTTCTTGT+TGG - chr6_1:9504221-9504240 Msa0873880:CDS 45.0%
TACCAACAAGAAGGAGGAAG+TGG + chr6_1:9504226-9504245 None:intergenic 45.0%
ATAGGGTGTGGTGAATCTTG+TGG + chr6_1:9504260-9504279 None:intergenic 45.0%
TGAAGGGAAAAGTAGTTGGG+GGG + chr6_1:9504067-9504086 None:intergenic 45.0%
GTGAAGGGAAAAGTAGTTGG+GGG + chr6_1:9504068-9504087 None:intergenic 45.0%
AACCACTTCCTCCTTCTTGT+TGG - chr6_1:9504221-9504240 Msa0873880:CDS 45.0%
TACCAACAAGAAGGAGGAAG+TGG + chr6_1:9504226-9504245 None:intergenic 45.0%
ATAGGGTGTGGTGAATCTTG+TGG + chr6_1:9504260-9504279 None:intergenic 45.0%
GAAGGGAAAAGTAGTTGGGG+GGG + chr6_1:9504066-9504085 None:intergenic 50.0%
ACACACCATGCAGCTGTTGA+TGG - chr6_1:9504482-9504501 Msa0873880:CDS 50.0%
! TGTGGATTGTAGGCCACGTT+TGG - chr6_1:9504925-9504944 Msa0873880:CDS 50.0%
TTTCTATTGCCGGGTCACCT+AGG - chr6_1:9505158-9505177 Msa0873880:CDS 50.0%
AACGTCAAACCTAGGTGACC+CGG + chr6_1:9505170-9505189 None:intergenic 50.0%
GAAGGGAAAAGTAGTTGGGG+GGG + chr6_1:9504066-9504085 None:intergenic 50.0%
ACACACCATGCAGCTGTTGA+TGG - chr6_1:9504482-9504501 Msa0873880:CDS 50.0%
! TGTGGATTGTAGGCCACGTT+TGG - chr6_1:9504925-9504944 Msa0873880:CDS 50.0%
TTTCTATTGCCGGGTCACCT+AGG - chr6_1:9505158-9505177 Msa0873880:CDS 50.0%
AACGTCAAACCTAGGTGACC+CGG + chr6_1:9505170-9505189 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 9504008 9505375 9504008 ID=Msa0873880;Name=Msa0873880
chr6_1 mRNA 9504008 9505375 9504008 ID=Msa0873880-mRNA-1;Parent=Msa0873880;Name=Msa0873880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|455
chr6_1 exon 9504008 9505375 9504008 ID=Msa0873880-mRNA-1:exon:2910;Parent=Msa0873880-mRNA-1
chr6_1 CDS 9504008 9505375 9504008 ID=Msa0873880-mRNA-1:cds;Parent=Msa0873880-mRNA-1
Gene Sequence

>Msa0873880

ATGGCACAATCTCACAAAGTTCATCAAGTTTTTTCAATATCAGCAAAAAATGAAACCCCCCCAACTACTTTTCCCTTCACTTTCTTTGACACACTTTGGGTAAGATTTCCACCAGTTGAACGTTTGTTCTTCTATGAACACACCAATTTGTCTACCAATTTTTTCTTTGATTCCATTCTTCCAAATCTCAAACACTCCCTTGAACTTACACTCAACCACTTCCTCCTTCTTGTTGGTAACATCACATGGCCACAAGATTCACCACACCCTATCATCAACTATGTCCCTAGTGATTCTATTCCCTTAATTGTAGCTGAATCAAATGAAAATTTCAACCTTTTATGTTCAAATCTTTGTGAAGTTGAAAAAAAACAATACTTGATCCCAACTTTGGAGATTTCACATGAAAAAGCATCAATTATTTCACTACAAGTCACTCTTTTTCCTAACCATGGATTTTGTATTGGTATAACTACACACCATGCAGCTGTTGATGGAAAATCTTCAACTTTGTTCATGAAAGCTTGGTCTTATTTTTGTTCCAACCTTGAAAAAAATACACCCTTTTTGTCCTTACCTCAAGATCTAACACCTTTCTTTGATAGGTCCATTATAAGAGACCCTATAGGGATAAATGAGATTTATTCAAAAGGGTGGTTGAATTTTGGTGGAGAAACAAATAATCGAAGCTTGAAGGTTTGGGAAACAATTAATACAATAAAGGGTGAAGCAATCAAAGGTATTTTTCAATTGTCACCTTTGGATATTCAAAAGCTTAAGAAACATGCACAATCCAAGATTGAAAAAAATAACAAGGTTATTAAGCTTTCAACTTTTTCAGTTACTTGTGCTTATTTGTTGGCATGTGCGATCAAAGTTGACCAACCAAAATCCAACAAGGTACCTTTTATTTTTAGTGTGGATTGTAGGCCACGTTTGGATCCACCAATTAATGCAAATTATTTTGGAAATTGTGTTGTGTCAAAATTAGTTTTGGGTGAAACCGAGGAATTTTTTAAAGATGATGGATTTGATAGTGCTCTTGAAGGGATAAGTGATGTGTTGAAGGGTTTGGAAAATGGTGTGTTGAAGGGTTTGGAGAATTGGATGTCAATAATGCAATCTACAATGAGTGAGACAGATAGGATATTTTCTATTGCCGGGTCACCTAGGTTTGACGTTTATAGTTTTGATTTTGGATGGGGTAAACCTAAGAAAGTTGATGTTACTTCTATTGACAAAACAGGAGCTTTTTCTCTTTCGGAGAATAAGAATAATGATGGTGGAATTGAGATTGGTTTGGCTTTGAACAAACAACAAATGGAGGTTTTTGCTCAACTTTTTGTTCAAGGACTTGAATCCTTGTAA

Protein sequence

>Msa0873880

MAQSHKVHQVFSISAKNETPPTTFPFTFFDTLWVRFPPVERLFFYEHTNLSTNFFFDSILPNLKHSLELTLNHFLLLVGNITWPQDSPHPIINYVPSDSIPLIVAESNENFNLLCSNLCEVEKKQYLIPTLEISHEKASIISLQVTLFPNHGFCIGITTHHAAVDGKSSTLFMKAWSYFCSNLEKNTPFLSLPQDLTPFFDRSIIRDPIGINEIYSKGWLNFGGETNNRSLKVWETINTIKGEAIKGIFQLSPLDIQKLKKHAQSKIEKNNKVIKLSTFSVTCAYLLACAIKVDQPKSNKVPFIFSVDCRPRLDPPINANYFGNCVVSKLVLGETEEFFKDDGFDSALEGISDVLKGLENGVLKGLENWMSIMQSTMSETDRIFSIAGSPRFDVYSFDFGWGKPKKVDVTSIDKTGAFSLSENKNNDGGIEIGLALNKQQMEVFAQLFVQGLESL*