Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060750 | XP_024627041.1 | 97.535 | 852 | 20 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1746 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060750 | sp|Q9FJD6|RBOHH_ARATH | 59.435 | 885 | 314 | 12 | 8 | 852 | 7 | 886 | 0.0 | 1084 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060750 | A0A396GYA9 | 97.535 | 852 | 20 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1746 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa1060750 | 0.812981 | 3.224246e-51 | -8.615850e-47 |
| Msa0011040 | Msa1060750 | 0.809233 | 2.094079e-50 | -8.615850e-47 |
| Msa0025570 | Msa1060750 | 0.817701 | 2.876745e-52 | -8.615850e-47 |
| Msa0048380 | Msa1060750 | 0.818498 | 1.900013e-52 | -8.615850e-47 |
| Msa0072180 | Msa1060750 | 0.808727 | 2.686368e-50 | -8.615850e-47 |
| Msa0073110 | Msa1060750 | 0.815032 | 1.137902e-51 | -8.615850e-47 |
| Msa0604220 | Msa1060750 | 0.801467 | 8.882869e-49 | -8.615850e-47 |
| Msa0682160 | Msa1060750 | 0.805329 | 1.406909e-49 | -8.615850e-47 |
| Msa0694320 | Msa1060750 | 0.816575 | 5.152953e-52 | -8.615850e-47 |
| Msa0701430 | Msa1060750 | 0.806657 | 7.396634e-50 | -8.615850e-47 |
| Msa0707330 | Msa1060750 | 0.807820 | 4.194129e-50 | -8.615850e-47 |
| Msa0719600 | Msa1060750 | 0.814049 | 1.877320e-51 | -8.615850e-47 |
| Msa0829990 | Msa1060750 | 0.811912 | 5.520727e-51 | -8.615850e-47 |
| Msa0831310 | Msa1060750 | 0.804785 | 1.828148e-49 | -8.615850e-47 |
| Msa0841090 | Msa1060750 | 0.801927 | 7.146444e-49 | -8.615850e-47 |
| Msa0163690 | Msa1060750 | 0.803745 | 3.011004e-49 | -8.615850e-47 |
| Msa0369990 | Msa1060750 | 0.820701 | 5.968200e-53 | -8.615850e-47 |
| Msa0405200 | Msa1060750 | 0.821321 | 4.295995e-53 | -8.615850e-47 |
| Msa0417400 | Msa1060750 | 0.803606 | 3.217161e-49 | -8.615850e-47 |
| Msa1001120 | Msa1060750 | 0.800407 | 1.462533e-48 | -8.615850e-47 |
| Msa1021870 | Msa1060750 | 0.905568 | 3.742750e-80 | -8.615850e-47 |
| Msa1035050 | Msa1060750 | 0.800266 | 1.561900e-48 | -8.615850e-47 |
| Msa1041250 | Msa1060750 | 0.815129 | 1.082885e-51 | -8.615850e-47 |
| Msa1060750 | Msa1062060 | 0.809961 | 1.460859e-50 | -8.615850e-47 |
| Msa1060750 | Msa1075090 | 0.804487 | 2.109832e-49 | -8.615850e-47 |
| Msa1060750 | Msa1082080 | 0.802549 | 5.322665e-49 | -8.615850e-47 |
| Msa1060750 | Msa1106030 | 0.889405 | 2.495194e-73 | -8.615850e-47 |
| Msa1060750 | Msa1107220 | 0.823562 | 1.295386e-53 | -8.615850e-47 |
| Msa1060750 | Msa1107250 | 0.812240 | 4.684179e-51 | -8.615850e-47 |
| Msa1060750 | Msa1108560 | 0.821875 | 3.199062e-53 | -8.615850e-47 |
| Msa1060750 | Msa1123730 | 0.812692 | 3.729948e-51 | -8.615850e-47 |
| Msa1060750 | Msa1136690 | 0.803310 | 3.705313e-49 | -8.615850e-47 |
| Msa1060750 | Msa1147010 | 0.803813 | 2.914018e-49 | -8.615850e-47 |
| Msa1060750 | Msa1149270 | 0.933661 | 1.335660e-95 | -8.615850e-47 |
| Msa1060750 | Msa1150740 | 0.802109 | 6.556500e-49 | -8.615850e-47 |
| Msa1060750 | Msa1150760 | 0.809743 | 1.626982e-50 | -8.615850e-47 |
| Msa1060750 | Msa1169870 | 0.814033 | 1.893106e-51 | -8.615850e-47 |
| Msa1060750 | Msa1202110 | 0.806541 | 7.824712e-50 | -8.615850e-47 |
| Msa1060750 | Msa1202800 | 0.802439 | 5.606380e-49 | -8.615850e-47 |
| Msa1060750 | Msa1221270 | 0.818748 | 1.667029e-52 | -8.615850e-47 |
| Msa1060750 | Msa1223990 | 0.813165 | 2.938311e-51 | -8.615850e-47 |
| Msa1060750 | Msa1254870 | 0.807266 | 5.497623e-50 | -8.615850e-47 |
| Msa1060750 | Msa1263110 | 0.800138 | 1.658685e-48 | -8.615850e-47 |
| Msa1060750 | Msa1265240 | 0.804172 | 2.454507e-49 | -8.615850e-47 |
| Msa1060750 | Msa1284020 | 0.816479 | 5.413522e-52 | -8.615850e-47 |
| Msa1060750 | Msa1322500 | 0.803083 | 4.129216e-49 | -8.615850e-47 |
| Msa1060750 | Msa1328430 | 0.807538 | 4.813601e-50 | -8.615850e-47 |
| Msa1060750 | Msa1366480 | 0.815506 | 8.927031e-52 | -8.615850e-47 |
| Msa1060750 | Msa1407810 | 0.821739 | 3.439880e-53 | -8.615850e-47 |
| Msa1060750 | Msa1419320 | 0.807096 | 5.973918e-50 | -8.615850e-47 |
| Msa1060750 | Msa1433360 | 0.824742 | 6.843408e-54 | -8.615850e-47 |
| Msa1060750 | Msa1437780 | 0.824018 | 1.013076e-53 | -8.615850e-47 |
| Msa0269710 | Msa1060750 | 0.800801 | 1.215095e-48 | -8.615850e-47 |
| Msa0275730 | Msa1060750 | 0.805582 | 1.245215e-49 | -8.615850e-47 |
| Msa0324810 | Msa1060750 | 0.802551 | 5.317601e-49 | -8.615850e-47 |
| Msa0345050 | Msa1060750 | 0.821592 | 3.719222e-53 | -8.615850e-47 |
| Msa0345890 | Msa1060750 | 0.812269 | 4.614683e-51 | -8.615850e-47 |
| Msa0345980 | Msa1060750 | 0.812248 | 4.665519e-51 | -8.615850e-47 |
| Msa0354600 | Msa1060750 | 0.805607 | 1.230065e-49 | -8.615850e-47 |
| Msa0488580 | Msa1060750 | 0.802987 | 4.322105e-49 | -8.615850e-47 |
| Msa0490100 | Msa1060750 | 0.801190 | 1.012043e-48 | -8.615850e-47 |
| Msa0497680 | Msa1060750 | 0.812617 | 3.874304e-51 | -8.615850e-47 |
| Msa0540640 | Msa1060750 | 0.815345 | 9.693189e-52 | -8.615850e-47 |
| Msa0556270 | Msa1060750 | 0.811168 | 8.011501e-51 | -8.615850e-47 |
| Msa0565180 | Msa1060750 | 0.803811 | 2.917099e-49 | -8.615850e-47 |
| Msa0567330 | Msa1060750 | 0.823822 | 1.126296e-53 | -8.615850e-47 |
| Msa0567570 | Msa1060750 | 0.806296 | 8.813267e-50 | -8.615850e-47 |
| Msa0576320 | Msa1060750 | 0.809723 | 1.643096e-50 | -8.615850e-47 |
| Msa0581350 | Msa1060750 | 0.812561 | 3.984117e-51 | -8.615850e-47 |
| Msa0873880 | Msa1060750 | 0.815025 | 1.142159e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060750 | MtrunA17_Chr7g0238371 | 97.535 | 852 | 20 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1746 |
| Msa1060750 | MtrunA17_Chr1g0192121 | 51.222 | 859 | 371 | 13 | 17 | 852 | 52 | 885 | 0.0 | 892 |
| Msa1060750 | MtrunA17_Chr7g0272591 | 53.739 | 789 | 342 | 11 | 69 | 852 | 125 | 895 | 0.0 | 877 |
| Msa1060750 | MtrunA17_Chr8g0387591 | 52.375 | 800 | 350 | 9 | 68 | 852 | 161 | 944 | 0.0 | 874 |
| Msa1060750 | MtrunA17_Chr2g0301511 | 51.673 | 807 | 352 | 11 | 66 | 852 | 143 | 931 | 0.0 | 833 |
| Msa1060750 | MtrunA17_Chr3g0131401 | 50.752 | 798 | 354 | 13 | 72 | 852 | 148 | 923 | 0.0 | 824 |
| Msa1060750 | MtrunA17_Chr8g0385411 | 48.557 | 797 | 377 | 12 | 69 | 852 | 122 | 898 | 0.0 | 801 |
| Msa1060750 | MtrunA17_Chr3g0131381 | 47.001 | 817 | 380 | 16 | 69 | 852 | 121 | 917 | 0.0 | 729 |
| Msa1060750 | MtrunA17_Chr3g0131361 | 44.226 | 814 | 403 | 15 | 69 | 852 | 118 | 910 | 0.0 | 710 |
| Msa1060750 | MtrunA17_Chr4g0061441 | 44.361 | 798 | 393 | 11 | 64 | 852 | 75 | 830 | 0.0 | 696 |
| Msa1060750 | MtrunA17_Chr2g0291481 | 26.122 | 245 | 145 | 5 | 470 | 711 | 293 | 504 | 7.27e-20 | 95.1 |
| Msa1060750 | MtrunA17_Chr1g0202731 | 26.126 | 222 | 119 | 7 | 470 | 688 | 272 | 451 | 9.99e-15 | 78.6 |
| Msa1060750 | MtrunA17_Chr4g0058571 | 27.397 | 219 | 120 | 8 | 470 | 685 | 280 | 462 | 7.66e-14 | 75.5 |
| Msa1060750 | MtrunA17_Chr1g0202741 | 25.225 | 222 | 121 | 7 | 470 | 688 | 267 | 446 | 1.58e-13 | 74.7 |
| Msa1060750 | MtrunA17_Chr8g0349071 | 24.091 | 220 | 123 | 6 | 470 | 686 | 37 | 215 | 1.25e-11 | 66.6 |
| Msa1060750 | MtrunA17_Chr8g0348531 | 25.862 | 174 | 97 | 4 | 515 | 686 | 316 | 459 | 1.98e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060750 | AT5G60010.1 | 59.435 | 885 | 314 | 12 | 8 | 852 | 7 | 886 | 0.0 | 1084 |
| Msa1060750 | AT3G45810.1 | 57.393 | 913 | 324 | 9 | 2 | 852 | 3 | 912 | 0.0 | 1051 |
| Msa1060750 | AT1G64060.1 | 52.015 | 794 | 356 | 7 | 68 | 852 | 167 | 944 | 0.0 | 868 |
| Msa1060750 | AT5G51060.1 | 51.324 | 793 | 362 | 11 | 68 | 852 | 129 | 905 | 0.0 | 849 |
| Msa1060750 | AT5G47910.1 | 52.190 | 799 | 333 | 13 | 69 | 852 | 157 | 921 | 0.0 | 848 |
| Msa1060750 | AT1G09090.2 | 48.985 | 788 | 375 | 9 | 71 | 852 | 77 | 843 | 0.0 | 819 |
| Msa1060750 | AT1G19230.2 | 50.556 | 809 | 360 | 11 | 68 | 852 | 160 | 952 | 0.0 | 817 |
| Msa1060750 | AT4G25090.1 | 48.947 | 807 | 360 | 13 | 65 | 852 | 76 | 849 | 0.0 | 813 |
| Msa1060750 | AT1G19230.1 | 50.372 | 806 | 340 | 12 | 68 | 852 | 160 | 926 | 0.0 | 809 |
| Msa1060750 | AT4G25090.2 | 48.817 | 803 | 355 | 14 | 65 | 852 | 76 | 837 | 0.0 | 806 |
| Msa1060750 | AT5G07390.1 | 48.689 | 801 | 373 | 15 | 68 | 852 | 124 | 902 | 0.0 | 795 |
| Msa1060750 | AT4G11230.1 | 46.964 | 807 | 385 | 11 | 68 | 852 | 156 | 941 | 0.0 | 745 |
| Msa1060750 | AT5G07390.2 | 46.718 | 777 | 326 | 18 | 68 | 819 | 124 | 837 | 0.0 | 709 |
| Msa1060750 | AT1G09090.1 | 47.253 | 546 | 277 | 6 | 71 | 610 | 77 | 617 | 0.0 | 549 |
| Msa1060750 | AT5G50160.2 | 27.948 | 229 | 125 | 8 | 470 | 695 | 84 | 275 | 6.21e-21 | 98.2 |
| Msa1060750 | AT5G50160.1 | 27.948 | 229 | 125 | 8 | 470 | 695 | 263 | 454 | 2.71e-20 | 97.1 |
| Msa1060750 | AT5G49740.1 | 25.628 | 398 | 224 | 17 | 305 | 690 | 148 | 485 | 5.26e-20 | 95.9 |
| Msa1060750 | AT5G49740.3 | 26.593 | 361 | 198 | 16 | 337 | 690 | 185 | 485 | 1.40e-19 | 94.4 |
| Msa1060750 | AT5G49740.2 | 29.464 | 224 | 122 | 7 | 470 | 688 | 291 | 483 | 2.76e-19 | 92.8 |
| Msa1060750 | AT5G49730.1 | 28.194 | 227 | 125 | 7 | 470 | 690 | 282 | 476 | 1.67e-18 | 91.3 |
| Msa1060750 | AT5G49730.2 | 28.444 | 225 | 123 | 7 | 470 | 688 | 282 | 474 | 2.78e-18 | 89.7 |
| Msa1060750 | AT5G23990.1 | 29.362 | 235 | 118 | 7 | 457 | 688 | 206 | 395 | 1.41e-16 | 84.7 |
| Msa1060750 | AT5G23990.3 | 29.362 | 235 | 118 | 7 | 457 | 688 | 116 | 305 | 2.20e-16 | 84.0 |
| Msa1060750 | AT5G23990.2 | 29.279 | 222 | 111 | 6 | 470 | 688 | 259 | 437 | 5.36e-16 | 83.2 |
| Msa1060750 | AT5G23980.1 | 28.511 | 235 | 120 | 7 | 457 | 688 | 248 | 437 | 2.57e-15 | 80.9 |
| Msa1060750 | AT1G23020.2 | 26.818 | 220 | 117 | 8 | 470 | 686 | 300 | 478 | 5.92e-14 | 76.6 |
| Msa1060750 | AT1G23020.1 | 26.818 | 220 | 117 | 8 | 470 | 686 | 299 | 477 | 6.50e-14 | 76.3 |
| Msa1060750 | AT1G23020.5 | 26.818 | 220 | 117 | 8 | 470 | 686 | 299 | 477 | 6.50e-14 | 76.3 |
| Msa1060750 | AT1G23020.4 | 26.818 | 220 | 117 | 8 | 470 | 686 | 276 | 454 | 8.40e-14 | 75.9 |
| Msa1060750 | AT1G23020.3 | 26.818 | 220 | 117 | 8 | 470 | 686 | 276 | 454 | 8.40e-14 | 75.9 |
| Msa1060750 | AT1G23020.6 | 26.818 | 220 | 117 | 8 | 470 | 686 | 277 | 455 | 8.49e-14 | 75.9 |
| Msa1060750 | AT1G23020.7 | 26.818 | 220 | 117 | 8 | 470 | 686 | 273 | 451 | 9.05e-14 | 75.9 |
| Msa1060750 | AT1G01580.2 | 23.636 | 220 | 124 | 6 | 470 | 686 | 364 | 542 | 2.06e-13 | 74.7 |
| Msa1060750 | AT1G01580.1 | 23.636 | 220 | 124 | 6 | 470 | 686 | 286 | 464 | 2.78e-13 | 74.3 |
| Msa1060750 | AT1G01590.1 | 22.174 | 230 | 117 | 5 | 470 | 686 | 277 | 457 | 3.54e-12 | 70.9 |
Find 157 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGAAAAGTACCAAGTTTA+TGG | 0.129557 | 7_2:-49406169 | None:intergenic |
| TGCTCATCATTTGCTTATTC+TGG | 0.138321 | 7_2:+49406692 | Msa1060750:CDS |
| TGCTCATTGGTCTAGGAATT+GGG | 0.210810 | 7_2:+49407954 | Msa1060750:CDS |
| TTGCTCATTGGTCTAGGAAT+TGG | 0.238803 | 7_2:+49407953 | Msa1060750:CDS |
| ATGCTATCAAAAGATAAATT+TGG | 0.248228 | 7_2:+49404737 | Msa1060750:CDS |
| TGATCTTTACTCTTATAAAA+TGG | 0.257468 | 7_2:-49406923 | None:intergenic |
| AAATATGGATTATCGTTCTT+TGG | 0.257898 | 7_2:+49406142 | Msa1060750:CDS |
| GGCAGCTTGAAACTCTATTA+AGG | 0.266634 | 7_2:+49405974 | Msa1060750:CDS |
| CAAGAGGGCTTAAGGGTTTA+CGG | 0.270824 | 7_2:+49404630 | Msa1060750:CDS |
| ATTGCAGTTGGCGTAGTTAT+AGG | 0.279898 | 7_2:+49406396 | Msa1060750:CDS |
| AATAATATTAATATCAATAA+TGG | 0.289955 | 7_2:+49404575 | Msa1060750:CDS |
| GGTCCTTTGATGAGGATCTT+TGG | 0.299865 | 7_2:-49407887 | None:intergenic |
| ATGCTGCTCTTTCCTTGTAT+TGG | 0.302260 | 7_2:-49406203 | None:intergenic |
| ATCGAACTCCTATTAGAAAA+TGG | 0.302574 | 7_2:+49406079 | Msa1060750:CDS |
| TCACCGCGTGAACGTCATTA+AGG | 0.303134 | 7_2:+49406943 | Msa1060750:CDS |
| CCCCTTGGGATTGCACTTTG+AGG | 0.309571 | 7_2:-49407720 | None:intergenic |
| GAATTACTTTGAATCAAGTT+AGG | 0.312333 | 7_2:+49404962 | Msa1060750:CDS |
| TAATGTGGAAGTTCCTAAAA+AGG | 0.317728 | 7_2:+49404466 | Msa1060750:CDS |
| AGGAATATATGTGCAGAAAA+TGG | 0.319306 | 7_2:+49404940 | Msa1060750:CDS |
| TTTCTTGATAGAACGGTTAC+AGG | 0.326365 | 7_2:+49404653 | Msa1060750:CDS |
| TGCAAGACCAAACTGGAAAA+AGG | 0.326699 | 7_2:+49408894 | Msa1060750:CDS |
| ACCTTCGCCGTTGCATCATT+TGG | 0.328818 | 7_2:+49406647 | Msa1060750:CDS |
| TGGCCGGATTCAATTCCTTT+TGG | 0.336050 | 7_2:+49406667 | Msa1060750:CDS |
| TGTGTTCTTGTACCAAGTTT+TGG | 0.346518 | 7_2:-49406024 | None:intergenic |
| TTTACGCAACATGCAGTTGA+TGG | 0.348553 | 7_2:+49404713 | Msa1060750:CDS |
| GAGGACTTGCCATCTTCATT+TGG | 0.350150 | 7_2:-49408015 | None:intergenic |
| TCCTCATAAGGCTTCCCCTT+GGG | 0.355206 | 7_2:-49407734 | None:intergenic |
| TTCATAAAGAGAACTTCTAA+TGG | 0.356851 | 7_2:+49409681 | Msa1060750:CDS |
| AGGTGCTGCAAGAGGGCTTA+AGG | 0.358329 | 7_2:+49404622 | Msa1060750:CDS |
| GTCGGACAAGAAACTATTCT+TGG | 0.361255 | 7_2:-49406459 | None:intergenic |
| GTACAGATGAATCATCAAAA+TGG | 0.362238 | 7_2:+49404417 | Msa1060750:CDS |
| ACAAGTCCTCCTGGTATAAC+TGG | 0.377307 | 7_2:+49406549 | Msa1060750:CDS |
| CATTCAAAACTAGATATATC+TGG | 0.379978 | 7_2:-49407140 | None:intergenic |
| TGAAACTCTATTAAGGGAAA+TGG | 0.381478 | 7_2:+49405981 | Msa1060750:CDS |
| GAAAGTATCCATGTATGATT+AGG | 0.382017 | 7_2:-49406725 | None:intergenic |
| CTCTAGTTTCCATCCTCATA+AGG | 0.396143 | 7_2:-49407746 | None:intergenic |
| ATATAAGAACCTTAGGAGAT+TGG | 0.397795 | 7_2:+49407311 | Msa1060750:CDS |
| TCTTTCAAAATACTTATCAT+TGG | 0.399500 | 7_2:-49407983 | None:intergenic |
| GTAGTTCCACTAGTGCTCTA+TGG | 0.400959 | 7_2:+49406884 | Msa1060750:CDS |
| TAATTATGCTTCTTTGATCA+TGG | 0.411093 | 7_2:+49405826 | Msa1060750:CDS |
| TTCTCCATCACCTCTGCACC+TGG | 0.412455 | 7_2:+49407268 | Msa1060750:CDS |
| GGTGCTGCAAGAGGGCTTAA+GGG | 0.416339 | 7_2:+49404623 | Msa1060750:CDS |
| GCTTTGTGCTGGTGCTCCAT+AGG | 0.424489 | 7_2:-49407909 | None:intergenic |
| AGTGTTCATATAAGAACCTT+AGG | 0.429591 | 7_2:+49407304 | Msa1060750:CDS |
| GTGTTCTTCTACACATTGTA+AGG | 0.432326 | 7_2:-49406302 | None:intergenic |
| TTTCTAATATAGATAATTTG+AGG | 0.439401 | 7_2:+49404537 | Msa1060750:CDS |
| GGGAGCAAGCTTCATTTGAA+TGG | 0.445173 | 7_2:+49408509 | Msa1060750:CDS |
| TATGATGTACTCTTGCTCAT+TGG | 0.447007 | 7_2:+49407941 | Msa1060750:CDS |
| GTACTCTTGCTCATTGGTCT+AGG | 0.449393 | 7_2:+49407947 | Msa1060750:CDS |
| TGGAAGCAAAATGCGAAGAA+TGG | 0.455353 | 7_2:+49404595 | Msa1060750:CDS |
| GTTATCCGAAGAGGAGGTTA+AGG | 0.455792 | 7_2:+49405465 | Msa1060750:CDS |
| AGAGCAGCATATGAAGTAAT+GGG | 0.455926 | 7_2:+49406216 | Msa1060750:CDS |
| AGGCTGCTTATAATCAAAAC+CGG | 0.457705 | 7_2:-49406508 | None:intergenic |
| GAAAGCGGGTAGATGTGTTT+AGG | 0.458595 | 7_2:-49409655 | None:intergenic |
| TCTATATATCCATTATGATC+TGG | 0.460686 | 7_2:-49405860 | None:intergenic |
| TTCTATTTCTCACAAAGGAT+TGG | 0.462234 | 7_2:+49406745 | Msa1060750:CDS |
| CAGAATTTGTAAATGAAAAG+TGG | 0.463230 | 7_2:+49406115 | Msa1060750:CDS |
| AGTGCTTCTGCGAATAGATT+GGG | 0.463469 | 7_2:+49405782 | Msa1060750:CDS |
| TTGATGTAGTTTCAGAAAGC+CGG | 0.466256 | 7_2:+49408763 | Msa1060750:CDS |
| AAGTTTATGTTGTCATCAAA+AGG | 0.476309 | 7_2:-49406363 | None:intergenic |
| GATAAATTTGGACAATGCGT+TGG | 0.476888 | 7_2:+49404749 | Msa1060750:CDS |
| CACCTCCTTAACCTCCTCTT+CGG | 0.478322 | 7_2:-49405470 | None:intergenic |
| ATCTCCAGGTGCAGAGGTGA+TGG | 0.483230 | 7_2:-49407272 | None:intergenic |
| GCAGCTTGAAACTCTATTAA+GGG | 0.484143 | 7_2:+49405975 | Msa1060750:CDS |
| ACCCTTGTTACAAGTCCTCC+TGG | 0.485099 | 7_2:+49406540 | Msa1060750:CDS |
| GAGCTTGATCCAGATCATAA+TGG | 0.486770 | 7_2:+49405851 | Msa1060750:CDS |
| TTGGAAGTTTCTCCAATACA+AGG | 0.490350 | 7_2:+49406191 | Msa1060750:CDS |
| CTTTGTGCTGGTGCTCCATA+GGG | 0.490877 | 7_2:-49407908 | None:intergenic |
| ACACACGAAAGTTCTCGAAT+AGG | 0.491276 | 7_2:+49408937 | Msa1060750:CDS |
| ATCCTCATCAAAGGACCCTA+TGG | 0.491725 | 7_2:+49407893 | Msa1060750:CDS |
| AATTACTTTGAATCAAGTTA+GGG | 0.492462 | 7_2:+49404963 | Msa1060750:CDS |
| ATATAGATAATTTGAGGAGC+AGG | 0.495697 | 7_2:+49404543 | Msa1060750:CDS |
| ATCCTCATAAGGCTTCCCCT+TGG | 0.495748 | 7_2:-49407735 | None:intergenic |
| GAGTGCTTCTGCGAATAGAT+TGG | 0.496450 | 7_2:+49405781 | Msa1060750:CDS |
| AAGAGCAGCATATGAAGTAA+TGG | 0.497578 | 7_2:+49406215 | Msa1060750:CDS |
| ATACTTGAATCCTTGTGGCC+TGG | 0.497823 | 7_2:-49407087 | None:intergenic |
| TCTTTGGTTAACCATAAACT+TGG | 0.499848 | 7_2:+49406158 | Msa1060750:CDS |
| AAAATGCGAAGAATGGAATC+AGG | 0.504037 | 7_2:+49404602 | Msa1060750:CDS |
| CACTTATTGCCATGATTCAG+AGG | 0.509830 | 7_2:+49408718 | Msa1060750:CDS |
| TCCCAAGGGGAAGCCTTATG+AGG | 0.513021 | 7_2:+49407733 | Msa1060750:CDS |
| GGTGCAGAGGTGATGGAGAA+AGG | 0.518382 | 7_2:-49407265 | None:intergenic |
| ATGTTGCAGCCTCTGAATCA+TGG | 0.518777 | 7_2:-49408727 | None:intergenic |
| GTAACAAGGGTCAAGTAACT+AGG | 0.520469 | 7_2:-49406528 | None:intergenic |
| TATCTTGAACCAAATGAAGA+TGG | 0.520669 | 7_2:+49408006 | Msa1060750:CDS |
| TGATGTAGTTTCAGAAAGCC+GGG | 0.521880 | 7_2:+49408764 | Msa1060750:CDS |
| CTTTGATACTTGAATCCTTG+TGG | 0.521989 | 7_2:-49407092 | None:intergenic |
| CATGTTGAATTTGAGAGTCT+CGG | 0.523605 | 7_2:-49406268 | None:intergenic |
| CTATTTGACTAGTGTCTATG+AGG | 0.523871 | 7_2:+49408677 | Msa1060750:CDS |
| TTTATGGCGATACTTGGATC+CGG | 0.524679 | 7_2:+49406489 | Msa1060750:CDS |
| ATACCAAAAGGAATTGAATC+CGG | 0.527977 | 7_2:-49406670 | None:intergenic |
| TTCTGTAGTCCAATCTCCTA+AGG | 0.529329 | 7_2:-49407320 | None:intergenic |
| TTTCATAAGATCATTGCAGT+TGG | 0.531490 | 7_2:+49406384 | Msa1060750:CDS |
| TTGTTGTCACTTACGTGTTG+AGG | 0.532610 | 7_2:-49408034 | None:intergenic |
| AAGATACATGCACTCCTACA+TGG | 0.533572 | 7_2:-49406428 | None:intergenic |
| AGATCATAATGGATATATAG+AGG | 0.536287 | 7_2:+49405862 | Msa1060750:CDS |
| TCGCCGTTGCATCATTTGGC+CGG | 0.536324 | 7_2:+49406651 | Msa1060750:CDS |
| CATTGAGATCGTTCCTAATG+TGG | 0.536666 | 7_2:+49404451 | Msa1060750:CDS |
| ATGAGGCACTTGCAAGGAGA+AGG | 0.538462 | 7_2:+49404920 | Msa1060750:CDS |
| GCTTCATTTGAATGGTTCAA+AGG | 0.539793 | 7_2:+49408517 | Msa1060750:CDS |
| GCTCATTGGTCTAGGAATTG+GGG | 0.541341 | 7_2:+49407955 | Msa1060750:CDS |
| CTCCATAGGGTCCTTTGATG+AGG | 0.543105 | 7_2:-49407895 | None:intergenic |
| TAATGCTTATAGCTTTGTGC+TGG | 0.545684 | 7_2:-49407920 | None:intergenic |
| TTTACGGTTTCTTGATAGAA+CGG | 0.547318 | 7_2:+49404646 | Msa1060750:CDS |
| CTCTTTATGAAACTGAAAGC+GGG | 0.547870 | 7_2:-49409669 | None:intergenic |
| CAAAATACTTATCATTGGTG+TGG | 0.549167 | 7_2:-49407978 | None:intergenic |
| GAAATGGTTAGTGCAGAAGA+TGG | 0.552101 | 7_2:+49405997 | Msa1060750:CDS |
| GGATGAAGAAAATGAAAGCA+AGG | 0.553874 | 7_2:+49404487 | Msa1060750:CDS |
| AAGGGGAAGCCTTATGAGGA+TGG | 0.557678 | 7_2:+49407737 | Msa1060750:CDS |
| CAAATGATGAGCATACCAAA+AGG | 0.558680 | 7_2:-49406682 | None:intergenic |
| TTCAATGTTTGTGTAAGAGT+AGG | 0.563679 | 7_2:-49409611 | None:intergenic |
| TCAATACCATAGAGCACTAG+TGG | 0.564934 | 7_2:-49406890 | None:intergenic |
| GCCAAATGATGCAACGGCGA+AGG | 0.566068 | 7_2:-49406648 | None:intergenic |
| AACCTCAAAGTGCAATCCCA+AGG | 0.570159 | 7_2:+49407718 | Msa1060750:CDS |
| CAGGTAAAGAAGCTGATGCA+TGG | 0.571525 | 7_2:+49404672 | Msa1060750:CDS |
| GAAGATGGAAAACCAAAACT+TGG | 0.574672 | 7_2:+49406012 | Msa1060750:CDS |
| TACCAGGAGGACTTGTAACA+AGG | 0.575725 | 7_2:-49406542 | None:intergenic |
| TTGACTAGTGTCTATGAGGA+AGG | 0.577395 | 7_2:+49408681 | Msa1060750:CDS |
| CATAACAGGAAAGGTCTGAG+AGG | 0.581602 | 7_2:+49408413 | Msa1060750:intron |
| AACTATATGAGGCACTTGCA+AGG | 0.582128 | 7_2:+49404914 | Msa1060750:CDS |
| AGCTCCGACGAAGATAGAAA+AGG | 0.582277 | 7_2:+49408454 | Msa1060750:CDS |
| TATATACTCCTAATCATACA+TGG | 0.582900 | 7_2:+49406717 | Msa1060750:CDS |
| AGGTGTGACAAGAATGGAGA+TGG | 0.584789 | 7_2:+49405439 | Msa1060750:intron |
| AGGTATGGGAGCAGATTCAA+AGG | 0.586035 | 7_2:+49404879 | Msa1060750:intron |
| CAAGGATTCAAGTATCAAAG+TGG | 0.587965 | 7_2:+49407095 | Msa1060750:CDS |
| ACACTCAAGTAATCATCTCC+AGG | 0.593039 | 7_2:-49407286 | None:intergenic |
| ATAGGAACTTTAATCCATGT+AGG | 0.594439 | 7_2:+49406414 | Msa1060750:CDS |
| ACTTAGAAACATATTTGCAA+AGG | 0.597998 | 7_2:+49407342 | Msa1060750:CDS |
| ATAACAGGAAAGGTCTGAGA+GGG | 0.601480 | 7_2:+49408414 | Msa1060750:intron |
| TGAATGGTTCAAAGGTGTCA+TGG | 0.602687 | 7_2:+49408525 | Msa1060750:CDS |
| ATGGAATCAGGTGCTGCAAG+AGG | 0.602851 | 7_2:+49404614 | Msa1060750:CDS |
| TCTCTTTATGAAACTGAAAG+CGG | 0.605994 | 7_2:-49409670 | None:intergenic |
| GTCGGAGCTATTGCTACTGA+AGG | 0.606452 | 7_2:-49408440 | None:intergenic |
| TTCTAGCACTATACATGACC+AGG | 0.607954 | 7_2:+49407069 | Msa1060750:CDS |
| TGGTAGGTTATCCGAAGAGG+AGG | 0.608791 | 7_2:+49405459 | Msa1060750:CDS |
| ACCTCAAAGTGCAATCCCAA+GGG | 0.609156 | 7_2:+49407719 | Msa1060750:CDS |
| CGAGACTCTCAAATTCAACA+TGG | 0.610306 | 7_2:+49406269 | Msa1060750:CDS |
| TATCCAAAGATCCTCATCAA+AGG | 0.614918 | 7_2:+49407884 | Msa1060750:CDS |
| GTGACAAGAATGGAGATGGT+AGG | 0.616832 | 7_2:+49405443 | Msa1060750:CDS |
| ATGAAAATTCCAGTTATACC+AGG | 0.623236 | 7_2:-49406558 | None:intergenic |
| GTAATCATCTCCAGGTGCAG+AGG | 0.624032 | 7_2:-49407278 | None:intergenic |
| TGGAATCAGGTGCTGCAAGA+GGG | 0.624765 | 7_2:+49404615 | Msa1060750:CDS |
| ACCAGGAGGACTTGTAACAA+GGG | 0.625491 | 7_2:-49406541 | None:intergenic |
| TTTCAGGCAATAATATACAC+AGG | 0.626612 | 7_2:+49407041 | Msa1060750:intron |
| AATCCGGCCAAATGATGCAA+CGG | 0.630870 | 7_2:-49406654 | None:intergenic |
| CTATACATGACCAGGCCACA+AGG | 0.631046 | 7_2:+49407077 | Msa1060750:CDS |
| ATACTTTCTATTTCTCACAA+AGG | 0.632880 | 7_2:+49406740 | Msa1060750:CDS |
| TTAGGCTAAACTCTTGACAA+AGG | 0.636508 | 7_2:-49409637 | None:intergenic |
| AGAGCACTAGTGGAACTACA+AGG | 0.645965 | 7_2:-49406880 | None:intergenic |
| ATCCGAAGAGGAGGTTAAGG+AGG | 0.650542 | 7_2:+49405468 | Msa1060750:CDS |
| ATAGGAGTTCGATACTTGCA+CGG | 0.651363 | 7_2:-49406069 | None:intergenic |
| AGATGGTAGGTTATCCGAAG+AGG | 0.659477 | 7_2:+49405456 | Msa1060750:CDS |
| AAAGGATTGGCATAAGAAGA+CGG | 0.663961 | 7_2:+49406758 | Msa1060750:CDS |
| AGAACACTTACAAAGTTACG+AGG | 0.706746 | 7_2:+49406318 | Msa1060750:CDS |
| GTATTGACAATTCAAAACCA+AGG | 0.707286 | 7_2:+49407784 | Msa1060750:CDS |
| ATACCTTAATGACGTTCACG+CGG | 0.717609 | 7_2:-49406946 | None:intergenic |
| AAAATTCCAGTTATACCAGG+AGG | 0.721195 | 7_2:-49406555 | None:intergenic |
| CCTCAAAGTGCAATCCCAAG+GGG | 0.727531 | 7_2:+49407720 | Msa1060750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAAAACTTTGTTAATTT+TGG | - | chr7_2:49408337-49408356 | None:intergenic | 10.0% |
| !!! | TATTACTTTTAATTACAAAT+CGG | + | chr7_2:49409025-49409044 | Msa1060750:intron | 10.0% |
| !! | TTTCTAATATAGATAATTTG+AGG | + | chr7_2:49404537-49404556 | Msa1060750:CDS | 15.0% |
| !! | AACTAAAATCATTAAAAACA+AGG | - | chr7_2:49404810-49404829 | None:intergenic | 15.0% |
| !! | TTAGAGAGAATAATTTAAAT+CGG | - | chr7_2:49406843-49406862 | None:intergenic | 15.0% |
| !!! | TGAATATGTTTTTAGAATTA+CGG | + | chr7_2:49407610-49407629 | Msa1060750:intron | 15.0% |
| !! | TATTATTCTCAAATTATTAC+CGG | + | chr7_2:49408135-49408154 | Msa1060750:intron | 15.0% |
| !! | AAACTAAGTTAATCTAAATT+AGG | + | chr7_2:49408311-49408330 | Msa1060750:intron | 15.0% |
| !!! | AAGTTTTATATACTTTTTGT+AGG | + | chr7_2:49408346-49408365 | Msa1060750:intron | 15.0% |
| !! | CAAAAAAAAAAAAAATGAAC+AGG | - | chr7_2:49409291-49409310 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTTTTTTTGTCA+AGG | + | chr7_2:49409294-49409313 | Msa1060750:intron | 15.0% |
| !!! | AGAAATTCACATTTTTTTTA+AGG | + | chr7_2:49409329-49409348 | Msa1060750:intron | 15.0% |
| !!! | TTGATTTTTAGTAAAATCAT+CGG | - | chr7_2:49409468-49409487 | None:intergenic | 15.0% |
| !! | ATGCTATCAAAAGATAAATT+TGG | + | chr7_2:49404737-49404756 | Msa1060750:CDS | 20.0% |
| !! | TTGAAAACAATGTTGTATAT+AGG | + | chr7_2:49404859-49404878 | Msa1060750:intron | 20.0% |
| !! | AATTACTTTGAATCAAGTTA+GGG | + | chr7_2:49404963-49404982 | Msa1060750:CDS | 20.0% |
| !! | TCAAGAAAAAAACTTTAGAT+AGG | + | chr7_2:49405229-49405248 | Msa1060750:intron | 20.0% |
| !! | AAAAAGTTGAATGAGTAAAA+GGG | - | chr7_2:49405320-49405339 | None:intergenic | 20.0% |
| !! | ATGAATGATTTCATATTAAG+TGG | + | chr7_2:49405387-49405406 | Msa1060750:intron | 20.0% |
| !! | AAATGTCGTTACAATTTAAT+CGG | - | chr7_2:49405904-49405923 | None:intergenic | 20.0% |
| !! | ATGAAAAGTGGAAAAAAATA+TGG | + | chr7_2:49406127-49406146 | Msa1060750:CDS | 20.0% |
| !! | TGATCTTTACTCTTATAAAA+TGG | - | chr7_2:49406926-49406945 | None:intergenic | 20.0% |
| !! | TAATATAAAATTTCCCGTTT+CGG | - | chr7_2:49407010-49407029 | None:intergenic | 20.0% |
| !! | TATTACTAGTTGAAAATTTC+AGG | + | chr7_2:49407025-49407044 | Msa1060750:intron | 20.0% |
| !! | ATAAGTACATCATAACATTA+TGG | - | chr7_2:49407838-49407857 | None:intergenic | 20.0% |
| !! | TCTTTCAAAATACTTATCAT+TGG | - | chr7_2:49407986-49408005 | None:intergenic | 20.0% |
| !!! | TGAAAGAGCATATTTTTATT+GGG | + | chr7_2:49408480-49408499 | Msa1060750:CDS | 20.0% |
| !!! | ATATTTTTATTGGGTAACAA+GGG | + | chr7_2:49408489-49408508 | Msa1060750:CDS | 20.0% |
| !! | TATGATAAAAGCTTAATCTT+TGG | - | chr7_2:49408840-49408859 | None:intergenic | 20.0% |
| !!! | ACATTTTCTTAAATCACTTA+GGG | - | chr7_2:49408998-49409017 | None:intergenic | 20.0% |
| !!! | AACATTTTCTTAAATCACTT+AGG | - | chr7_2:49408999-49409018 | None:intergenic | 20.0% |
| !!! | CAAATTTTGTATCTTTGTTA+TGG | + | chr7_2:49409099-49409118 | Msa1060750:intron | 20.0% |
| !!! | TTTGTTATGGTTTTAAATTC+TGG | + | chr7_2:49409112-49409131 | Msa1060750:intron | 20.0% |
| !!! | TGATTTTCAAAGATTTGAAT+AGG | - | chr7_2:49409428-49409447 | None:intergenic | 20.0% |
| !!! | TTTATATGAGAAGATGTTTT+TGG | - | chr7_2:49409493-49409512 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGAGTCTATTTG+AGG | + | chr7_2:49409508-49409527 | Msa1060750:intron | 20.0% |
| !! | TCATTTTCTTCATCCTTTTT+AGG | - | chr7_2:49404482-49404501 | None:intergenic | 25.0% |
| ! | AACAATGTTGTATATAGGTA+TGG | + | chr7_2:49404864-49404883 | Msa1060750:intron | 25.0% |
| ! | ACAATGTTGTATATAGGTAT+GGG | + | chr7_2:49404865-49404884 | Msa1060750:intron | 25.0% |
| ! | GAATTACTTTGAATCAAGTT+AGG | + | chr7_2:49404962-49404981 | Msa1060750:CDS | 25.0% |
| ! | TAAAGTTATTAACAAGCGAA+AGG | - | chr7_2:49405086-49405105 | None:intergenic | 25.0% |
| !! | GCTTGTTAATAACTTTAGAT+AGG | + | chr7_2:49405089-49405108 | Msa1060750:intron | 25.0% |
| ! | GAAAAAGTTGAATGAGTAAA+AGG | - | chr7_2:49405321-49405340 | None:intergenic | 25.0% |
| ! | TTCATTTAACATGCAAAAGA+AGG | - | chr7_2:49405372-49405391 | None:intergenic | 25.0% |
| !!! | TCTAACTGTTTTTGTGTAAA+AGG | + | chr7_2:49405748-49405767 | Msa1060750:intron | 25.0% |
| ! | TAATTATGCTTCTTTGATCA+TGG | + | chr7_2:49405826-49405845 | Msa1060750:CDS | 25.0% |
| ! | TCTATATATCCATTATGATC+TGG | - | chr7_2:49405863-49405882 | None:intergenic | 25.0% |
| !!! | AGATCATAATGGATATATAG+AGG | + | chr7_2:49405862-49405881 | Msa1060750:CDS | 25.0% |
| !! | TTTGTGATCCATTTTCTAAT+AGG | - | chr7_2:49406090-49406109 | None:intergenic | 25.0% |
| !! | CTTTTCATTTACAAATTCTG+CGG | - | chr7_2:49406115-49406134 | None:intergenic | 25.0% |
| ! | CAGAATTTGTAAATGAAAAG+TGG | + | chr7_2:49406115-49406134 | Msa1060750:CDS | 25.0% |
| !! | AAATATGGATTATCGTTCTT+TGG | + | chr7_2:49406142-49406161 | Msa1060750:CDS | 25.0% |
| ! | AAGTTTATGTTGTCATCAAA+AGG | - | chr7_2:49406366-49406385 | None:intergenic | 25.0% |
| !!! | AAGTATCGCCATAAATTTTT+CGG | - | chr7_2:49406484-49406503 | None:intergenic | 25.0% |
| !!! | AATTTTCATGGTCTTGATTA+TGG | + | chr7_2:49406572-49406591 | Msa1060750:CDS | 25.0% |
| ! | TATATACTCCTAATCATACA+TGG | + | chr7_2:49406717-49406736 | Msa1060750:CDS | 25.0% |
| !! | ATACTTTCTATTTCTCACAA+AGG | + | chr7_2:49406740-49406759 | Msa1060750:CDS | 25.0% |
| !!! | AATTTTTATTTACGCCGAAA+CGG | + | chr7_2:49406993-49407012 | Msa1060750:intron | 25.0% |
| ! | CATTCAAAACTAGATATATC+TGG | - | chr7_2:49407143-49407162 | None:intergenic | 25.0% |
| !!! | CAGATATATCTAGTTTTGAA+TGG | + | chr7_2:49407141-49407160 | Msa1060750:CDS | 25.0% |
| ! | AATGGTAATTATGATCTACT+TGG | + | chr7_2:49407159-49407178 | Msa1060750:intron | 25.0% |
| !!! | CTGCAAAATTACTTTTACTT+AGG | + | chr7_2:49407212-49407231 | Msa1060750:intron | 25.0% |
| !!! | TCGAATTTACTCTTTTTTAC+AGG | + | chr7_2:49407239-49407258 | Msa1060750:intron | 25.0% |
| ! | ACTTAGAAACATATTTGCAA+AGG | + | chr7_2:49407342-49407361 | Msa1060750:CDS | 25.0% |
| !! | CAACAACTATCATATTTCTA+AGG | - | chr7_2:49407649-49407668 | None:intergenic | 25.0% |
| !! | ACTAATTCCTTAGATACTTT+TGG | - | chr7_2:49408218-49408237 | None:intergenic | 25.0% |
| ! | ATTCTTAGAGTTAACATAAC+AGG | + | chr7_2:49408399-49408418 | Msa1060750:intron | 25.0% |
| ! | CAATAAAAATATGCTCTTTC+AGG | - | chr7_2:49408481-49408500 | None:intergenic | 25.0% |
| !!! | CTGAAAGAGCATATTTTTAT+TGG | + | chr7_2:49408479-49408498 | Msa1060750:CDS | 25.0% |
| !!! | CATATTTTTATTGGGTAACA+AGG | + | chr7_2:49408488-49408507 | Msa1060750:CDS | 25.0% |
| ! | AGGTAAAAAAGCAAAAAGTT+TGG | - | chr7_2:49408590-49408609 | None:intergenic | 25.0% |
| !! | TCTAAAATTGTGTTACATTG+AGG | - | chr7_2:49408610-49408629 | None:intergenic | 25.0% |
| ! | GAACTAAATCAAAATATACC+CGG | - | chr7_2:49408785-49408804 | None:intergenic | 25.0% |
| ! | CATTTGAAAACAGAAAATGA+CGG | - | chr7_2:49409062-49409081 | None:intergenic | 25.0% |
| !! | TCTGTTTTCAAATGTTTGTA+TGG | + | chr7_2:49409068-49409087 | Msa1060750:intron | 25.0% |
| ! | CGCTGAAAATCTTTATATTA+CGG | + | chr7_2:49409147-49409166 | Msa1060750:intron | 25.0% |
| ! | CTTTATATTACGGAAAAATG+TGG | + | chr7_2:49409157-49409176 | Msa1060750:intron | 25.0% |
| !!! | TTTTTTAAGGTGAATAAGTG+AGG | + | chr7_2:49409342-49409361 | Msa1060750:intron | 25.0% |
| GTACAGATGAATCATCAAAA+TGG | + | chr7_2:49404417-49404436 | Msa1060750:CDS | 30.0% | |
| !! | TTTTTAGGAACTTCCACATT+AGG | - | chr7_2:49404467-49404486 | None:intergenic | 30.0% |
| TAATGTGGAAGTTCCTAAAA+AGG | + | chr7_2:49404466-49404485 | Msa1060750:CDS | 30.0% | |
| ATATAGATAATTTGAGGAGC+AGG | + | chr7_2:49404543-49404562 | Msa1060750:CDS | 30.0% | |
| TTTACGGTTTCTTGATAGAA+CGG | + | chr7_2:49404646-49404665 | Msa1060750:CDS | 30.0% | |
| AGGAATATATGTGCAGAAAA+TGG | + | chr7_2:49404940-49404959 | Msa1060750:CDS | 30.0% | |
| !!! | TGAATCAAGTTAGGGTTTTT+TGG | + | chr7_2:49404971-49404990 | Msa1060750:CDS | 30.0% |
| !!! | GAATCAAGTTAGGGTTTTTT+GGG | + | chr7_2:49404972-49404991 | Msa1060750:CDS | 30.0% |
| AACTTTAGATAGGCAAATGT+TGG | + | chr7_2:49405239-49405258 | Msa1060750:intron | 30.0% | |
| ! | TTACTATTTTCTCCTTCATC+CGG | + | chr7_2:49405281-49405300 | Msa1060750:intron | 30.0% |
| !! | AATGAGCTAAAGTCATTTTC+AGG | + | chr7_2:49405419-49405438 | Msa1060750:intron | 30.0% |
| TGCTTCATAGGAAACAAAAT+AGG | - | chr7_2:49405526-49405545 | None:intergenic | 30.0% | |
| CAATAAATATTGTCGAGTGT+TGG | + | chr7_2:49405689-49405708 | Msa1060750:intron | 30.0% | |
| TGAAACTCTATTAAGGGAAA+TGG | + | chr7_2:49405981-49406000 | Msa1060750:CDS | 30.0% | |
| ATCGAACTCCTATTAGAAAA+TGG | + | chr7_2:49406079-49406098 | Msa1060750:CDS | 30.0% | |
| TCTTTGGTTAACCATAAACT+TGG | + | chr7_2:49406158-49406177 | Msa1060750:CDS | 30.0% | |
| !! | AACGAAAAGTACCAAGTTTA+TGG | - | chr7_2:49406172-49406191 | None:intergenic | 30.0% |
| ! | TAAACTTGGTACTTTTCGTT+TGG | + | chr7_2:49406172-49406191 | Msa1060750:CDS | 30.0% |
| TTTCATAAGATCATTGCAGT+TGG | + | chr7_2:49406384-49406403 | Msa1060750:CDS | 30.0% | |
| ATAGGAACTTTAATCCATGT+AGG | + | chr7_2:49406414-49406433 | Msa1060750:CDS | 30.0% | |
| GAAAAATTTATGGCGATACT+TGG | + | chr7_2:49406483-49406502 | Msa1060750:CDS | 30.0% | |
| ATGAAAATTCCAGTTATACC+AGG | - | chr7_2:49406561-49406580 | None:intergenic | 30.0% | |
| ! | TGGTATAACTGGAATTTTCA+TGG | + | chr7_2:49406560-49406579 | Msa1060750:CDS | 30.0% |
| ! | TATGGCTTTTACTTTCACTT+TGG | + | chr7_2:49406590-49406609 | Msa1060750:CDS | 30.0% |
| ATACCAAAAGGAATTGAATC+CGG | - | chr7_2:49406673-49406692 | None:intergenic | 30.0% | |
| !! | GAAAGTATCCATGTATGATT+AGG | - | chr7_2:49406728-49406747 | None:intergenic | 30.0% |
| ! | TTCTATTTCTCACAAAGGAT+TGG | + | chr7_2:49406745-49406764 | Msa1060750:CDS | 30.0% |
| !! | ATTTTTATTTACGCCGAAAC+GGG | + | chr7_2:49406994-49407013 | Msa1060750:intron | 30.0% |
| TTTCAGGCAATAATATACAC+AGG | + | chr7_2:49407041-49407060 | Msa1060750:intron | 30.0% | |
| AGTGTTCATATAAGAACCTT+AGG | + | chr7_2:49407304-49407323 | Msa1060750:CDS | 30.0% | |
| ATATAAGAACCTTAGGAGAT+TGG | + | chr7_2:49407311-49407330 | Msa1060750:CDS | 30.0% | |
| GACTAACTGATTATGAAGTA+TGG | - | chr7_2:49407569-49407588 | None:intergenic | 30.0% | |
| ACTTCATAATCAGTTAGTCA+AGG | + | chr7_2:49407570-49407589 | Msa1060750:intron | 30.0% | |
| AGTCAAGGTTTATCAGAAAT+AGG | + | chr7_2:49407585-49407604 | Msa1060750:intron | 30.0% | |
| GTCAAGGTTTATCAGAAATA+GGG | + | chr7_2:49407586-49407605 | Msa1060750:intron | 30.0% | |
| TTACTAAGACTTAAACATGC+AGG | + | chr7_2:49407689-49407708 | Msa1060750:intron | 30.0% | |
| ! | GTATTGACAATTCAAAACCA+AGG | + | chr7_2:49407784-49407803 | Msa1060750:CDS | 30.0% |
| ! | TCAAGAGTTTTTATTCACCT+TGG | - | chr7_2:49407804-49407823 | None:intergenic | 30.0% |
| CAAAATACTTATCATTGGTG+TGG | - | chr7_2:49407981-49408000 | None:intergenic | 30.0% | |
| TATCTTGAACCAAATGAAGA+TGG | + | chr7_2:49408006-49408025 | Msa1060750:CDS | 30.0% | |
| !! | ATCTAAAGTGTTGGTCAAAT+CGG | - | chr7_2:49408061-49408080 | None:intergenic | 30.0% |
| !! | ATCTTCTCCAAAAGTATCTA+AGG | + | chr7_2:49408208-49408227 | Msa1060750:intron | 30.0% |
| ! | TTTTTAGATGCTCTCTCATT+AGG | + | chr7_2:49408246-49408265 | Msa1060750:intron | 30.0% |
| ! | TCATTTACGGTTTGTTTATG+TGG | - | chr7_2:49408274-49408293 | None:intergenic | 30.0% |
| GATCTTTCGTTCTTCATTTA+CGG | - | chr7_2:49408287-49408306 | None:intergenic | 30.0% | |
| TAGAGTTAACATAACAGGAA+AGG | + | chr7_2:49408404-49408423 | Msa1060750:intron | 30.0% | |
| AATGTGTTCTTATCTGCATA+TGG | - | chr7_2:49408873-49408892 | None:intergenic | 30.0% | |
| ! | CCTCAATATTAAGGATTTTG+AGG | - | chr7_2:49409224-49409243 | None:intergenic | 30.0% |
| CCTCAAAATCCTTAATATTG+AGG | + | chr7_2:49409221-49409240 | Msa1060750:intron | 30.0% | |
| AAATTGTGGCCTCAATATTA+AGG | - | chr7_2:49409233-49409252 | None:intergenic | 30.0% | |
| !!! | ACAATCATGGTTTTAAGTTG+CGG | - | chr7_2:49409266-49409285 | None:intergenic | 30.0% |
| AAATGAACAGGAAACAATCA+TGG | - | chr7_2:49409279-49409298 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTGTCAAGGATCC+TGG | + | chr7_2:49409301-49409320 | Msa1060750:intron | 30.0% |
| GATTTGAATAGGAAACAATC+TGG | - | chr7_2:49409417-49409436 | None:intergenic | 30.0% | |
| !! | TCTTGCTATTTACTTGATTC+AGG | + | chr7_2:49409569-49409588 | Msa1060750:intron | 30.0% |
| TTCAATGTTTGTGTAAGAGT+AGG | - | chr7_2:49409614-49409633 | None:intergenic | 30.0% | |
| TCTCTTTATGAAACTGAAAG+CGG | - | chr7_2:49409673-49409692 | None:intergenic | 30.0% | |
| GGATGAAGAAAATGAAAGCA+AGG | + | chr7_2:49404487-49404506 | Msa1060750:CDS | 35.0% | |
| AAAATGCGAAGAATGGAATC+AGG | + | chr7_2:49404602-49404621 | Msa1060750:CDS | 35.0% | |
| TTTCTTGATAGAACGGTTAC+AGG | + | chr7_2:49404653-49404672 | Msa1060750:CDS | 35.0% | |
| GATAAATTTGGACAATGCGT+TGG | + | chr7_2:49404749-49404768 | Msa1060750:CDS | 35.0% | |
| ! | CAGATTCAAAGGATTTTGCT+GGG | + | chr7_2:49404890-49404909 | Msa1060750:CDS | 35.0% |
| ! | AGATTCAAAGGATTTTGCTG+GGG | + | chr7_2:49404891-49404910 | Msa1060750:CDS | 35.0% |
| CAAGTGTTCTTTGACATGTA+AGG | + | chr7_2:49405030-49405049 | Msa1060750:intron | 35.0% | |
| CTAAATTAGCCCATTCAAAC+TGG | - | chr7_2:49405204-49405223 | None:intergenic | 35.0% | |
| ! | TACTATTTTCTCCTTCATCC+GGG | + | chr7_2:49405282-49405301 | Msa1060750:intron | 35.0% |
| !!! | ATTTTCAGGTGTGACAAGAA+TGG | + | chr7_2:49405433-49405452 | Msa1060750:intron | 35.0% |
| ACCATCATGTGTCAGATATT+TGG | + | chr7_2:49405657-49405676 | Msa1060750:intron | 35.0% | |
| TCCAAATATCTGACACATGA+TGG | - | chr7_2:49405661-49405680 | None:intergenic | 35.0% | |
| ACATCTCTTGAAAACAGATG+TGG | + | chr7_2:49405953-49405972 | Msa1060750:intron | 35.0% | |
| GCAGCTTGAAACTCTATTAA+GGG | + | chr7_2:49405975-49405994 | Msa1060750:CDS | 35.0% | |
| GAAGATGGAAAACCAAAACT+TGG | + | chr7_2:49406012-49406031 | Msa1060750:CDS | 35.0% | |
| ! | TGTGTTCTTGTACCAAGTTT+TGG | - | chr7_2:49406027-49406046 | None:intergenic | 35.0% |
| TTGGAAGTTTCTCCAATACA+AGG | + | chr7_2:49406191-49406210 | Msa1060750:CDS | 35.0% | |
| AAGAGCAGCATATGAAGTAA+TGG | + | chr7_2:49406215-49406234 | Msa1060750:CDS | 35.0% | |
| AGAGCAGCATATGAAGTAAT+GGG | + | chr7_2:49406216-49406235 | Msa1060750:CDS | 35.0% | |
| ! | ATCATGTCTCTGTTTTGCAA+AGG | + | chr7_2:49406239-49406258 | Msa1060750:CDS | 35.0% |
| ! | TCATGTCTCTGTTTTGCAAA+GGG | + | chr7_2:49406240-49406259 | Msa1060750:CDS | 35.0% |
| CATGTTGAATTTGAGAGTCT+CGG | - | chr7_2:49406271-49406290 | None:intergenic | 35.0% | |
| GTGTTCTTCTACACATTGTA+AGG | - | chr7_2:49406305-49406324 | None:intergenic | 35.0% | |
| AGAACACTTACAAAGTTACG+AGG | + | chr7_2:49406318-49406337 | Msa1060750:CDS | 35.0% | |
| TTGTCCGACCGAAAAATTTA+TGG | + | chr7_2:49406473-49406492 | Msa1060750:CDS | 35.0% | |
| !! | ATCGCCATAAATTTTTCGGT+CGG | - | chr7_2:49406480-49406499 | None:intergenic | 35.0% |
| AGGCTGCTTATAATCAAAAC+CGG | - | chr7_2:49406511-49406530 | None:intergenic | 35.0% | |
| AAAATTCCAGTTATACCAGG+AGG | - | chr7_2:49406558-49406577 | None:intergenic | 35.0% | |
| CAAATGATGAGCATACCAAA+AGG | - | chr7_2:49406685-49406704 | None:intergenic | 35.0% | |
| TGCTCATCATTTGCTTATTC+TGG | + | chr7_2:49406692-49406711 | Msa1060750:CDS | 35.0% | |
| ! | AAAGGATTGGCATAAGAAGA+CGG | + | chr7_2:49406758-49406777 | Msa1060750:CDS | 35.0% |
| ATTCTCTCTAAATGCAGACT+TGG | + | chr7_2:49406852-49406871 | Msa1060750:intron | 35.0% | |
| CTTTGATACTTGAATCCTTG+TGG | - | chr7_2:49407095-49407114 | None:intergenic | 35.0% | |
| CAAGGATTCAAGTATCAAAG+TGG | + | chr7_2:49407095-49407114 | Msa1060750:CDS | 35.0% | |
| TTCAGCGTAATTACAAGTGT+CGG | + | chr7_2:49407492-49407511 | Msa1060750:intron | 35.0% | |
| !! | TAATGCTTATAGCTTTGTGC+TGG | - | chr7_2:49407923-49407942 | None:intergenic | 35.0% |
| TATGATGTACTCTTGCTCAT+TGG | + | chr7_2:49407941-49407960 | Msa1060750:CDS | 35.0% | |
| TGACCAACACTTTAGATTGA+AGG | + | chr7_2:49408064-49408083 | Msa1060750:intron | 35.0% | |
| GCTTCATTTGAATGGTTCAA+AGG | + | chr7_2:49408517-49408536 | Msa1060750:CDS | 35.0% | |
| TTAACATGTTTCAACGATGC+AGG | + | chr7_2:49408635-49408654 | Msa1060750:intron | 35.0% | |
| TAACATGTTTCAACGATGCA+GGG | + | chr7_2:49408636-49408655 | Msa1060750:intron | 35.0% | |
| CTATTTGACTAGTGTCTATG+AGG | + | chr7_2:49408677-49408696 | Msa1060750:CDS | 35.0% | |
| TTGATGTAGTTTCAGAAAGC+CGG | + | chr7_2:49408763-49408782 | Msa1060750:CDS | 35.0% | |
| !!! | ATGGTTTTAAATTCTGGCCA+CGG | + | chr7_2:49409118-49409137 | Msa1060750:intron | 35.0% |
| ! | GCGGATTGTAATTGAAATTG+TGG | - | chr7_2:49409247-49409266 | None:intergenic | 35.0% |
| !! | AATGTGAATTTCTAGCTACC+AGG | - | chr7_2:49409322-49409341 | None:intergenic | 35.0% |
| GAATAGGAAACAATCTGGTA+GGG | - | chr7_2:49409412-49409431 | None:intergenic | 35.0% | |
| TGAATAGGAAACAATCTGGT+AGG | - | chr7_2:49409413-49409432 | None:intergenic | 35.0% | |
| ! | GATTCAGGTGTATTTTACTG+TGG | + | chr7_2:49409584-49409603 | Msa1060750:intron | 35.0% |
| TTAGGCTAAACTCTTGACAA+AGG | - | chr7_2:49409640-49409659 | None:intergenic | 35.0% | |
| CTCTTTATGAAACTGAAAGC+GGG | - | chr7_2:49409672-49409691 | None:intergenic | 35.0% | |
| CATTGAGATCGTTCCTAATG+TGG | + | chr7_2:49404451-49404470 | Msa1060750:CDS | 40.0% | |
| TGGAAGCAAAATGCGAAGAA+TGG | + | chr7_2:49404595-49404614 | Msa1060750:CDS | 40.0% | |
| TTTACGCAACATGCAGTTGA+TGG | + | chr7_2:49404713-49404732 | Msa1060750:CDS | 40.0% | |
| ! | GCAGATTCAAAGGATTTTGC+TGG | + | chr7_2:49404889-49404908 | Msa1060750:CDS | 40.0% |
| ! | TTTTGCTGGGGAACTATATG+AGG | + | chr7_2:49404903-49404922 | Msa1060750:CDS | 40.0% |
| ! | AACTATATGAGGCACTTGCA+AGG | + | chr7_2:49404914-49404933 | Msa1060750:CDS | 40.0% |
| !!! | TCAAGTTAGGGTTTTTTGGG+AGG | + | chr7_2:49404975-49404994 | Msa1060750:CDS | 40.0% |
| TTAGATAGGCAAAACCTGCT+TGG | + | chr7_2:49405103-49405122 | Msa1060750:intron | 40.0% | |
| TAGATAGGCAAAACCTGCTT+GGG | + | chr7_2:49405104-49405123 | Msa1060750:intron | 40.0% | |
| GAATCGAAACTGAGACCTTA+AGG | - | chr7_2:49405172-49405191 | None:intergenic | 40.0% | |
| ! | ACTATTTTCTCCTTCATCCG+GGG | + | chr7_2:49405283-49405302 | Msa1060750:intron | 40.0% |
| !! | TATGAAGCACTGACTCAGAA+CGG | + | chr7_2:49405537-49405556 | Msa1060750:intron | 40.0% |
| AGTGCTTCTGCGAATAGATT+GGG | + | chr7_2:49405782-49405801 | Msa1060750:CDS | 40.0% | |
| GAGCTTGATCCAGATCATAA+TGG | + | chr7_2:49405851-49405870 | Msa1060750:CDS | 40.0% | |
| GGCAGCTTGAAACTCTATTA+AGG | + | chr7_2:49405974-49405993 | Msa1060750:CDS | 40.0% | |
| GAAATGGTTAGTGCAGAAGA+TGG | + | chr7_2:49405997-49406016 | Msa1060750:CDS | 40.0% | |
| ATAGGAGTTCGATACTTGCA+CGG | - | chr7_2:49406072-49406091 | None:intergenic | 40.0% | |
| ATGCTGCTCTTTCCTTGTAT+TGG | - | chr7_2:49406206-49406225 | None:intergenic | 40.0% | |
| CGAGACTCTCAAATTCAACA+TGG | + | chr7_2:49406269-49406288 | Msa1060750:CDS | 40.0% | |
| ATTGCAGTTGGCGTAGTTAT+AGG | + | chr7_2:49406396-49406415 | Msa1060750:CDS | 40.0% | |
| AAGATACATGCACTCCTACA+TGG | - | chr7_2:49406431-49406450 | None:intergenic | 40.0% | |
| GTCGGACAAGAAACTATTCT+TGG | - | chr7_2:49406462-49406481 | None:intergenic | 40.0% | |
| TTTATGGCGATACTTGGATC+CGG | + | chr7_2:49406489-49406508 | Msa1060750:CDS | 40.0% | |
| GTAACAAGGGTCAAGTAACT+AGG | - | chr7_2:49406531-49406550 | None:intergenic | 40.0% | |
| CGGAATCTGTACTGAAATCT+TGG | - | chr7_2:49406823-49406842 | None:intergenic | 40.0% | |
| ! | TCAATACCATAGAGCACTAG+TGG | - | chr7_2:49406893-49406912 | None:intergenic | 40.0% |
| ATACCTTAATGACGTTCACG+CGG | - | chr7_2:49406949-49406968 | None:intergenic | 40.0% | |
| TTCTAGCACTATACATGACC+AGG | + | chr7_2:49407069-49407088 | Msa1060750:CDS | 40.0% | |
| ACACTCAAGTAATCATCTCC+AGG | - | chr7_2:49407289-49407308 | None:intergenic | 40.0% | |
| TTCTGTAGTCCAATCTCCTA+AGG | - | chr7_2:49407323-49407342 | None:intergenic | 40.0% | |
| GTTCAGTTAGCTATGAAGCA+CGG | + | chr7_2:49407402-49407421 | Msa1060750:intron | 40.0% | |
| !! | GTAATTACAAGTGTCGGTGT+CGG | + | chr7_2:49407498-49407517 | Msa1060750:intron | 40.0% |
| ! | CTCTAGTTTCCATCCTCATA+AGG | - | chr7_2:49407749-49407768 | None:intergenic | 40.0% |
| ! | TTGCTCATTGGTCTAGGAAT+TGG | + | chr7_2:49407953-49407972 | Msa1060750:CDS | 40.0% |
| ! | TGCTCATTGGTCTAGGAATT+GGG | + | chr7_2:49407954-49407973 | Msa1060750:CDS | 40.0% |
| ! | TTGTTGTCACTTACGTGTTG+AGG | - | chr7_2:49408037-49408056 | None:intergenic | 40.0% |
| ! | AGGCCTTCAATCTAAAGTGT+TGG | - | chr7_2:49408070-49408089 | None:intergenic | 40.0% |
| CTTTAGATTGAAGGCCTGTA+TGG | + | chr7_2:49408073-49408092 | Msa1060750:intron | 40.0% | |
| CAACACTGACATATAGACAC+CGG | - | chr7_2:49408157-49408176 | None:intergenic | 40.0% | |
| GGTGTCTATATGTCAGTGTT+GGG | + | chr7_2:49408156-49408175 | Msa1060750:intron | 40.0% | |
| ATAACAGGAAAGGTCTGAGA+GGG | + | chr7_2:49408414-49408433 | Msa1060750:intron | 40.0% | |
| ! | AGGACCTTTTCTATCTTCGT+CGG | - | chr7_2:49408461-49408480 | None:intergenic | 40.0% |
| !! | TGAATGGTTCAAAGGTGTCA+TGG | + | chr7_2:49408525-49408544 | Msa1060750:CDS | 40.0% |
| TTGACTAGTGTCTATGAGGA+AGG | + | chr7_2:49408681-49408700 | Msa1060750:CDS | 40.0% | |
| CACTTATTGCCATGATTCAG+AGG | + | chr7_2:49408718-49408737 | Msa1060750:CDS | 40.0% | |
| AGGCTGCAACATGCTAAAAA+TGG | + | chr7_2:49408738-49408757 | Msa1060750:CDS | 40.0% | |
| TGATGTAGTTTCAGAAAGCC+GGG | + | chr7_2:49408764-49408783 | Msa1060750:CDS | 40.0% | |
| ! | CACATTTTGCAAGACCAAAC+TGG | + | chr7_2:49408887-49408906 | Msa1060750:CDS | 40.0% |
| TGCAAGACCAAACTGGAAAA+AGG | + | chr7_2:49408894-49408913 | Msa1060750:CDS | 40.0% | |
| ! | GAGAAGACCTTTTTCCAGTT+TGG | - | chr7_2:49408904-49408923 | None:intergenic | 40.0% |
| ACACACGAAAGTTCTCGAAT+AGG | + | chr7_2:49408937-49408956 | Msa1060750:CDS | 40.0% | |
| GACAATGCACGATATATGCA+GGG | - | chr7_2:49409390-49409409 | None:intergenic | 40.0% | |
| CAAGAGGGCTTAAGGGTTTA+CGG | + | chr7_2:49404630-49404649 | Msa1060750:CDS | 45.0% | |
| CAGGTAAAGAAGCTGATGCA+TGG | + | chr7_2:49404672-49404691 | Msa1060750:CDS | 45.0% | |
| AGGTATGGGAGCAGATTCAA+AGG | + | chr7_2:49404879-49404898 | Msa1060750:intron | 45.0% | |
| TCGAAACTGAGACCTTAAGG+AGG | - | chr7_2:49405169-49405188 | None:intergenic | 45.0% | |
| GTCTCAGTTTCGATTCTACC+CGG | + | chr7_2:49405176-49405195 | Msa1060750:intron | 45.0% | |
| !! | GCTCAACTGGTTTGAGCTAA+AGG | - | chr7_2:49405347-49405366 | None:intergenic | 45.0% |
| GCAAAAGAAGGTAGCTCAAC+TGG | - | chr7_2:49405360-49405379 | None:intergenic | 45.0% | |
| AGGTGTGACAAGAATGGAGA+TGG | + | chr7_2:49405439-49405458 | Msa1060750:intron | 45.0% | |
| GTGACAAGAATGGAGATGGT+AGG | + | chr7_2:49405443-49405462 | Msa1060750:CDS | 45.0% | |
| AGATGGTAGGTTATCCGAAG+AGG | + | chr7_2:49405456-49405475 | Msa1060750:CDS | 45.0% | |
| GTTATCCGAAGAGGAGGTTA+AGG | + | chr7_2:49405465-49405484 | Msa1060750:CDS | 45.0% | |
| ! | GTTCTGAGTCAGTGCTTCAT+AGG | - | chr7_2:49405538-49405557 | None:intergenic | 45.0% |
| TGCAAGTGTCAATGTCGTGT+TGG | + | chr7_2:49405619-49405638 | Msa1060750:intron | 45.0% | |
| GAGTGCTTCTGCGAATAGAT+TGG | + | chr7_2:49405781-49405800 | Msa1060750:CDS | 45.0% | |
| ACCAGGAGGACTTGTAACAA+GGG | - | chr7_2:49406544-49406563 | None:intergenic | 45.0% | |
| TACCAGGAGGACTTGTAACA+AGG | - | chr7_2:49406545-49406564 | None:intergenic | 45.0% | |
| ACAAGTCCTCCTGGTATAAC+TGG | + | chr7_2:49406549-49406568 | Msa1060750:CDS | 45.0% | |
| AATCCGGCCAAATGATGCAA+CGG | - | chr7_2:49406657-49406676 | None:intergenic | 45.0% | |
| ! | TGGCCGGATTCAATTCCTTT+TGG | + | chr7_2:49406667-49406686 | Msa1060750:CDS | 45.0% |
| ! | AGAGCACTAGTGGAACTACA+AGG | - | chr7_2:49406883-49406902 | None:intergenic | 45.0% |
| GTAGTTCCACTAGTGCTCTA+TGG | + | chr7_2:49406884-49406903 | Msa1060750:CDS | 45.0% | |
| ATACTTGAATCCTTGTGGCC+TGG | - | chr7_2:49407090-49407109 | None:intergenic | 45.0% | |
| TTAGCTATGAAGCACGGACA+AGG | + | chr7_2:49407408-49407427 | Msa1060750:intron | 45.0% | |
| TGTCGATGTGTTAGTGTCTG+TGG | - | chr7_2:49407444-49407463 | None:intergenic | 45.0% | |
| AGTATGGACACTCCTCAGAT+AGG | - | chr7_2:49407553-49407572 | None:intergenic | 45.0% | |
| AACCTCAAAGTGCAATCCCA+AGG | + | chr7_2:49407718-49407737 | Msa1060750:CDS | 45.0% | |
| ACCTCAAAGTGCAATCCCAA+GGG | + | chr7_2:49407719-49407738 | Msa1060750:CDS | 45.0% | |
| ! | GTACTCTTGCTCATTGGTCT+AGG | + | chr7_2:49407947-49407966 | Msa1060750:CDS | 45.0% |
| ! | GCTCATTGGTCTAGGAATTG+GGG | + | chr7_2:49407955-49407974 | Msa1060750:CDS | 45.0% |
| GAGGACTTGCCATCTTCATT+TGG | - | chr7_2:49408018-49408037 | None:intergenic | 45.0% | |
| TAGATTGAAGGCCTGTATGG+CGG | + | chr7_2:49408076-49408095 | Msa1060750:intron | 45.0% | |
| CGGCACGATACTAACATATG+CGG | + | chr7_2:49408096-49408115 | Msa1060750:intron | 45.0% | |
| CGGTGTCTATATGTCAGTGT+TGG | + | chr7_2:49408155-49408174 | Msa1060750:intron | 45.0% | |
| CATAACAGGAAAGGTCTGAG+AGG | + | chr7_2:49408413-49408432 | Msa1060750:intron | 45.0% | |
| AGCTCCGACGAAGATAGAAA+AGG | + | chr7_2:49408454-49408473 | Msa1060750:CDS | 45.0% | |
| GGGAGCAAGCTTCATTTGAA+TGG | + | chr7_2:49408509-49408528 | Msa1060750:CDS | 45.0% | |
| ATGTTGCAGCCTCTGAATCA+TGG | - | chr7_2:49408730-49408749 | None:intergenic | 45.0% | |
| ! | GATTTTCAGCGTAACAACCG+TGG | - | chr7_2:49409138-49409157 | None:intergenic | 45.0% |
| GGACGATGCAGTTGAAATTG+TGG | + | chr7_2:49409178-49409197 | Msa1060750:intron | 45.0% | |
| TTGTGGTTGCGATGCCATTA+CGG | + | chr7_2:49409195-49409214 | Msa1060750:intron | 45.0% | |
| !!! | GGATTTTGAGGTGTCCGTAA+TGG | - | chr7_2:49409212-49409231 | None:intergenic | 45.0% |
| ! | AGGTGAATAAGTGAGGTGTC+TGG | + | chr7_2:49409349-49409368 | Msa1060750:intron | 45.0% |
| ! | GGTGAATAAGTGAGGTGTCT+GGG | + | chr7_2:49409350-49409369 | Msa1060750:intron | 45.0% |
| CACGATATATGCAGGGTTCA+GGG | - | chr7_2:49409383-49409402 | None:intergenic | 45.0% | |
| GGACAATGCACGATATATGC+AGG | - | chr7_2:49409391-49409410 | None:intergenic | 45.0% | |
| GAAAGCGGGTAGATGTGTTT+AGG | - | chr7_2:49409658-49409677 | None:intergenic | 45.0% | |
| !! | AATAATATTAATATCAATAA+TGG | + | chr7_2:49404575-49404594 | Msa1060750:CDS | 5.0% |
| ! | ATGGAATCAGGTGCTGCAAG+AGG | + | chr7_2:49404614-49404633 | Msa1060750:CDS | 50.0% |
| ! | TGGAATCAGGTGCTGCAAGA+GGG | + | chr7_2:49404615-49404634 | Msa1060750:CDS | 50.0% |
| ! | ATGAGGCACTTGCAAGGAGA+AGG | + | chr7_2:49404920-49404939 | Msa1060750:CDS | 50.0% |
| TAGGCAAAACCTGCTTGGGT+TGG | + | chr7_2:49405108-49405127 | Msa1060750:intron | 50.0% | |
| !! | TTGGCCTGGTGGTATTGACT+TGG | + | chr7_2:49405127-49405146 | Msa1060750:intron | 50.0% |
| !! | TGGCCTGGTGGTATTGACTT+GGG | + | chr7_2:49405128-49405147 | Msa1060750:intron | 50.0% |
| !! | GTGGTATTGACTTGGGACCT+GGG | + | chr7_2:49405135-49405154 | Msa1060750:intron | 50.0% |
| !! | TATTGACTTGGGACCTGGGA+GGG | + | chr7_2:49405139-49405158 | Msa1060750:intron | 50.0% |
| ! | TACCCGGTGCCAGTTTGAAT+GGG | + | chr7_2:49405192-49405211 | Msa1060750:intron | 50.0% |
| TAGCCCATTCAAACTGGCAC+CGG | - | chr7_2:49405198-49405217 | None:intergenic | 50.0% | |
| TGGTAGGTTATCCGAAGAGG+AGG | + | chr7_2:49405459-49405478 | Msa1060750:CDS | 50.0% | |
| ATCCGAAGAGGAGGTTAAGG+AGG | + | chr7_2:49405468-49405487 | Msa1060750:CDS | 50.0% | |
| CACCTCCTTAACCTCCTCTT+CGG | - | chr7_2:49405473-49405492 | None:intergenic | 50.0% | |
| ACCCTTGTTACAAGTCCTCC+TGG | + | chr7_2:49406540-49406559 | Msa1060750:CDS | 50.0% | |
| ACCTTCGCCGTTGCATCATT+TGG | + | chr7_2:49406647-49406666 | Msa1060750:CDS | 50.0% | |
| TCACCGCGTGAACGTCATTA+AGG | + | chr7_2:49406943-49406962 | Msa1060750:CDS | 50.0% | |
| CTATACATGACCAGGCCACA+AGG | + | chr7_2:49407077-49407096 | Msa1060750:CDS | 50.0% | |
| GTAATCATCTCCAGGTGCAG+AGG | - | chr7_2:49407281-49407300 | None:intergenic | 50.0% | |
| GTGTTAGTGTCTGTGGTGTC+CGG | - | chr7_2:49407437-49407456 | None:intergenic | 50.0% | |
| AGATAGGCATGTCCTGGTGT+CGG | - | chr7_2:49407537-49407556 | None:intergenic | 50.0% | |
| CCTCAAAGTGCAATCCCAAG+GGG | + | chr7_2:49407720-49407739 | Msa1060750:CDS | 50.0% | |
| TCCTCATAAGGCTTCCCCTT+GGG | - | chr7_2:49407737-49407756 | None:intergenic | 50.0% | |
| ATCCTCATAAGGCTTCCCCT+TGG | - | chr7_2:49407738-49407757 | None:intergenic | 50.0% | |
| ! | AAGGGGAAGCCTTATGAGGA+TGG | + | chr7_2:49407737-49407756 | Msa1060750:CDS | 50.0% |
| ! | CTTTGTGCTGGTGCTCCATA+GGG | - | chr7_2:49407911-49407930 | None:intergenic | 50.0% |
| TTAGTATCGTGCCGCCATAC+AGG | - | chr7_2:49408090-49408109 | None:intergenic | 50.0% | |
| GTCGGAGCTATTGCTACTGA+AGG | - | chr7_2:49408443-49408462 | None:intergenic | 50.0% | |
| GCACGATATATGCAGGGTTC+AGG | - | chr7_2:49409384-49409403 | None:intergenic | 50.0% | |
| ! | AGGTGCTGCAAGAGGGCTTA+AGG | + | chr7_2:49404622-49404641 | Msa1060750:CDS | 55.0% |
| ! | GGTGCTGCAAGAGGGCTTAA+GGG | + | chr7_2:49404623-49404642 | Msa1060750:CDS | 55.0% |
| !! | AAAACCTGCTTGGGTTGGCC+TGG | + | chr7_2:49405113-49405132 | Msa1060750:intron | 55.0% |
| GGTCCCAAGTCAATACCACC+AGG | - | chr7_2:49405134-49405153 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGACTTGGGACC+TGG | + | chr7_2:49405134-49405153 | Msa1060750:intron | 55.0% |
| !! | GTATTGACTTGGGACCTGGG+AGG | + | chr7_2:49405138-49405157 | Msa1060750:intron | 55.0% |
| ! | CTACCCGGTGCCAGTTTGAA+TGG | + | chr7_2:49405191-49405210 | Msa1060750:intron | 55.0% |
| AGCCCATTCAAACTGGCACC+GGG | - | chr7_2:49405197-49405216 | None:intergenic | 55.0% | |
| AAAGGGACAGAGCTCAACCC+CGG | - | chr7_2:49405303-49405322 | None:intergenic | 55.0% | |
| GCCAAATGATGCAACGGCGA+AGG | - | chr7_2:49406651-49406670 | None:intergenic | 55.0% | |
| TCGCCGTTGCATCATTTGGC+CGG | + | chr7_2:49406651-49406670 | Msa1060750:CDS | 55.0% | |
| !! | GGTGCAGAGGTGATGGAGAA+AGG | - | chr7_2:49407268-49407287 | None:intergenic | 55.0% |
| TTCTCCATCACCTCTGCACC+TGG | + | chr7_2:49407268-49407287 | Msa1060750:CDS | 55.0% | |
| ATCTCCAGGTGCAGAGGTGA+TGG | - | chr7_2:49407275-49407294 | None:intergenic | 55.0% | |
| TGAAGCACGGACAAGGACAC+CGG | + | chr7_2:49407415-49407434 | Msa1060750:intron | 55.0% | |
| CACCAGGACATGCCTATCTG+AGG | + | chr7_2:49407538-49407557 | Msa1060750:intron | 55.0% | |
| CTCCTCAGATAGGCATGTCC+TGG | - | chr7_2:49407543-49407562 | None:intergenic | 55.0% | |
| CCCCTTGGGATTGCACTTTG+AGG | - | chr7_2:49407723-49407742 | None:intergenic | 55.0% | |
| ! | TCCCAAGGGGAAGCCTTATG+AGG | + | chr7_2:49407733-49407752 | Msa1060750:CDS | 55.0% |
| ! | GCTTTGTGCTGGTGCTCCAT+AGG | - | chr7_2:49407912-49407931 | None:intergenic | 55.0% |
| !! | TTAAGGAGGAGCACCCTCCC+AGG | - | chr7_2:49405155-49405174 | None:intergenic | 60.0% |
| !! | TGGGAGGGTGCTCCTCCTTA+AGG | + | chr7_2:49405154-49405173 | Msa1060750:intron | 60.0% |
| CAGAGCTCAACCCCGGATGA+AGG | - | chr7_2:49405296-49405315 | None:intergenic | 60.0% | |
| CACGACACATGTCCGACACC+AGG | + | chr7_2:49407522-49407541 | Msa1060750:intron | 60.0% | |
| !! | ACCTGCTTGGGTTGGCCTGG+TGG | + | chr7_2:49405116-49405135 | Msa1060750:intron | 65.0% |
| ACCACCAGGCCAACCCAAGC+AGG | - | chr7_2:49405120-49405139 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 49404398 | 49409700 | 49404398 | ID=Msa1060750;Name=Msa1060750 |
| chr7_2 | mRNA | 49404398 | 49409700 | 49404398 | ID=Msa1060750-mRNA-1;Parent=Msa1060750;Name=Msa1060750-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|14|0|852 |
| chr7_2 | exon | 49404398 | 49404770 | 49404398 | ID=Msa1060750-mRNA-1:exon:8871;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49404881 | 49405046 | 49404881 | ID=Msa1060750-mRNA-1:exon:8872;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49405441 | 49405489 | 49405441 | ID=Msa1060750-mRNA-1:exon:8873;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49405770 | 49405883 | 49405770 | ID=Msa1060750-mRNA-1:exon:8874;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49405970 | 49406779 | 49405970 | ID=Msa1060750-mRNA-1:exon:8875;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49406869 | 49406964 | 49406869 | ID=Msa1060750-mRNA-1:exon:8876;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49407047 | 49407162 | 49407047 | ID=Msa1060750-mRNA-1:exon:8877;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49407261 | 49407363 | 49407261 | ID=Msa1060750-mRNA-1:exon:8878;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49407711 | 49407805 | 49407711 | ID=Msa1060750-mRNA-1:exon:8879;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49407877 | 49408042 | 49407877 | ID=Msa1060750-mRNA-1:exon:8880;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49408421 | 49408573 | 49408421 | ID=Msa1060750-mRNA-1:exon:8881;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49408657 | 49408785 | 49408657 | ID=Msa1060750-mRNA-1:exon:8882;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49408880 | 49408958 | 49408880 | ID=Msa1060750-mRNA-1:exon:8883;Parent=Msa1060750-mRNA-1 |
| chr7_2 | exon | 49409591 | 49409700 | 49409591 | ID=Msa1060750-mRNA-1:exon:8884;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49404398 | 49404770 | 49404398 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49404881 | 49405046 | 49404881 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49405441 | 49405489 | 49405441 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49405770 | 49405883 | 49405770 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49405970 | 49406779 | 49405970 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49406869 | 49406964 | 49406869 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49407047 | 49407162 | 49407047 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49407261 | 49407363 | 49407261 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49407711 | 49407805 | 49407711 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49407877 | 49408042 | 49407877 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49408421 | 49408573 | 49408421 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49408657 | 49408785 | 49408657 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49408880 | 49408958 | 49408880 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| chr7_2 | CDS | 49409591 | 49409700 | 49409591 | ID=Msa1060750-mRNA-1:cds;Parent=Msa1060750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
