Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149270 | XP_024627041.1 | 97.183 | 852 | 23 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1742 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149270 | sp|Q9FJD6|RBOHH_ARATH | 59.322 | 885 | 315 | 12 | 8 | 852 | 7 | 886 | 0.0 | 1083 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149270 | A0A396GYA9 | 97.183 | 852 | 23 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1742 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa1149270 | 0.802398 | 5.716538e-49 | -8.615850e-47 |
| Msa0011040 | Msa1149270 | 0.800350 | 1.501910e-48 | -8.615850e-47 |
| Msa0025570 | Msa1149270 | 0.823472 | 1.360023e-53 | -8.615850e-47 |
| Msa0048380 | Msa1149270 | 0.800956 | 1.129896e-48 | -8.615850e-47 |
| Msa0072180 | Msa1149270 | 0.803382 | 3.580521e-49 | -8.615850e-47 |
| Msa0073110 | Msa1149270 | 0.820005 | 8.620490e-53 | -8.615850e-47 |
| Msa0095910 | Msa1149270 | 0.801038 | 1.087252e-48 | -8.615850e-47 |
| Msa0120450 | Msa1149270 | 0.802208 | 6.257489e-49 | -8.615850e-47 |
| Msa0643230 | Msa1149270 | 0.824892 | 6.309728e-54 | -8.615850e-47 |
| Msa0657340 | Msa1149270 | 0.803102 | 4.091005e-49 | -8.615850e-47 |
| Msa0660650 | Msa1149270 | 0.812215 | 4.741752e-51 | -8.615850e-47 |
| Msa0682110 | Msa1149270 | 0.815983 | 6.988711e-52 | -8.615850e-47 |
| Msa0682160 | Msa1149270 | 0.831353 | 1.751710e-55 | -8.615850e-47 |
| Msa0694320 | Msa1149270 | 0.810802 | 9.616180e-51 | -8.615850e-47 |
| Msa0733560 | Msa1149270 | 0.805201 | 1.496794e-49 | -8.615850e-47 |
| Msa0829990 | Msa1149270 | 0.814336 | 1.623048e-51 | -8.615850e-47 |
| Msa0148670 | Msa1149270 | 0.800280 | 1.551839e-48 | -8.615850e-47 |
| Msa0163690 | Msa1149270 | 0.814571 | 1.439520e-51 | -8.615850e-47 |
| Msa0369990 | Msa1149270 | 0.808687 | 2.740020e-50 | -8.615850e-47 |
| Msa0386910 | Msa1149270 | 0.818517 | 1.880704e-52 | -8.615850e-47 |
| Msa0393100 | Msa1149270 | 0.804690 | 1.913803e-49 | -8.615850e-47 |
| Msa0405200 | Msa1149270 | 0.816015 | 6.876576e-52 | -8.615850e-47 |
| Msa0405210 | Msa1149270 | 0.807644 | 4.569657e-50 | -8.615850e-47 |
| Msa0427560 | Msa1149270 | 0.810735 | 9.944289e-51 | -8.615850e-47 |
| Msa0460600 | Msa1149270 | 0.801406 | 9.142977e-49 | -8.615850e-47 |
| Msa0991010 | Msa1149270 | 0.805924 | 1.055241e-49 | -8.615850e-47 |
| Msa1001120 | Msa1149270 | 0.802891 | 4.524312e-49 | -8.615850e-47 |
| Msa1021870 | Msa1149270 | 0.907892 | 3.100599e-81 | -8.615850e-47 |
| Msa1029860 | Msa1149270 | 0.808282 | 3.344408e-50 | -8.615850e-47 |
| Msa1030320 | Msa1149270 | 0.800502 | 1.398318e-48 | -8.615850e-47 |
| Msa1035050 | Msa1149270 | 0.804610 | 1.989327e-49 | -8.615850e-47 |
| Msa1041250 | Msa1149270 | 0.808660 | 2.777057e-50 | -8.615850e-47 |
| Msa1060750 | Msa1149270 | 0.933661 | 1.335660e-95 | -8.615850e-47 |
| Msa1062060 | Msa1149270 | 0.806028 | 1.003614e-49 | -8.615850e-47 |
| Msa1103450 | Msa1149270 | 0.801652 | 8.140163e-49 | -8.615850e-47 |
| Msa1106030 | Msa1149270 | 0.949976 | 4.254644e-108 | -8.615850e-47 |
| Msa0257760 | Msa1149270 | 0.821534 | 3.835688e-53 | -8.615850e-47 |
| Msa0275730 | Msa1149270 | 0.811650 | 6.297159e-51 | -8.615850e-47 |
| Msa0306790 | Msa1149270 | 0.809051 | 2.290328e-50 | -8.615850e-47 |
| Msa0345050 | Msa1149270 | 0.821309 | 4.325118e-53 | -8.615850e-47 |
| Msa0345890 | Msa1149270 | 0.813090 | 3.052679e-51 | -8.615850e-47 |
| Msa0345980 | Msa1149270 | 0.809799 | 1.582962e-50 | -8.615850e-47 |
| Msa0354600 | Msa1149270 | 0.829460 | 5.083952e-55 | -8.615850e-47 |
| Msa1107220 | Msa1149270 | 0.814525 | 1.473525e-51 | -8.615850e-47 |
| Msa1108560 | Msa1149270 | 0.801751 | 7.765632e-49 | -8.615850e-47 |
| Msa1120580 | Msa1149270 | 0.808050 | 3.745739e-50 | -8.615850e-47 |
| Msa1120960 | Msa1149270 | 0.801064 | 1.073764e-48 | -8.615850e-47 |
| Msa1123730 | Msa1149270 | 0.806346 | 8.602848e-50 | -8.615850e-47 |
| Msa1136690 | Msa1149270 | 0.802664 | 5.040254e-49 | -8.615850e-47 |
| Msa1147010 | Msa1149270 | 0.812770 | 3.587153e-51 | -8.615850e-47 |
| Msa1149270 | Msa1157210 | 0.806586 | 7.655146e-50 | -8.615850e-47 |
| Msa1149270 | Msa1169870 | 0.811692 | 6.165387e-51 | -8.615850e-47 |
| Msa1149270 | Msa1202110 | 0.807588 | 4.697061e-50 | -8.615850e-47 |
| Msa1149270 | Msa1202800 | 0.805040 | 1.617668e-49 | -8.615850e-47 |
| Msa1149270 | Msa1221220 | 0.815862 | 7.436711e-52 | -8.615850e-47 |
| Msa1149270 | Msa1223990 | 0.819143 | 1.355703e-52 | -8.615850e-47 |
| Msa1149270 | Msa1254870 | 0.809126 | 2.207643e-50 | -8.615850e-47 |
| Msa1149270 | Msa1263110 | 0.801633 | 8.211729e-49 | -8.615850e-47 |
| Msa1149270 | Msa1265240 | 0.816842 | 4.488262e-52 | -8.615850e-47 |
| Msa1149270 | Msa1284020 | 0.800645 | 1.307928e-48 | -8.615850e-47 |
| Msa1149270 | Msa1297850 | 0.807382 | 5.194267e-50 | -8.615850e-47 |
| Msa1149270 | Msa1307530 | 0.804875 | 1.750596e-49 | -8.615850e-47 |
| Msa1149270 | Msa1328430 | 0.809333 | 1.993224e-50 | -8.615850e-47 |
| Msa1149270 | Msa1366480 | 0.804443 | 2.154894e-49 | -8.615850e-47 |
| Msa1149270 | Msa1368420 | 0.817136 | 3.855700e-52 | -8.615850e-47 |
| Msa1149270 | Msa1383220 | 0.815139 | 1.077493e-51 | -8.615850e-47 |
| Msa1149270 | Msa1398140 | 0.809776 | 1.601028e-50 | -8.615850e-47 |
| Msa1149270 | Msa1407810 | 0.811805 | 5.824733e-51 | -8.615850e-47 |
| Msa1149270 | Msa1433360 | 0.816244 | 6.112411e-52 | -8.615850e-47 |
| Msa1149270 | Msa1437780 | 0.812664 | 3.782826e-51 | -8.615850e-47 |
| Msa0497680 | Msa1149270 | 0.814092 | 1.836708e-51 | -8.615850e-47 |
| Msa0522170 | Msa1149270 | 0.802972 | 4.353596e-49 | -8.615850e-47 |
| Msa0523720 | Msa1149270 | 0.803559 | 3.291082e-49 | -8.615850e-47 |
| Msa0531050 | Msa1149270 | 0.808867 | 2.508157e-50 | -8.615850e-47 |
| Msa0540640 | Msa1149270 | 0.818457 | 1.940637e-52 | -8.615850e-47 |
| Msa0547370 | Msa1149270 | 0.814639 | 1.390372e-51 | -8.615850e-47 |
| Msa0556270 | Msa1149270 | 0.818816 | 1.609051e-52 | -8.615850e-47 |
| Msa0565180 | Msa1149270 | 0.812060 | 5.127164e-51 | -8.615850e-47 |
| Msa0567330 | Msa1149270 | 0.811316 | 7.439796e-51 | -8.615850e-47 |
| Msa0567570 | Msa1149270 | 0.801292 | 9.643999e-49 | -8.615850e-47 |
| Msa0602100 | Msa1149270 | 0.809989 | 1.440625e-50 | -8.615850e-47 |
| Msa0873880 | Msa1149270 | 0.829401 | 5.255884e-55 | -8.615850e-47 |
| Msa0873940 | Msa1149270 | 0.808467 | 3.052760e-50 | -8.615850e-47 |
| Msa0893220 | Msa1149270 | 0.826213 | 3.069568e-54 | -8.615850e-47 |
| Msa0898970 | Msa1149270 | 0.806752 | 7.060858e-50 | -8.615850e-47 |
| Msa0906680 | Msa1149270 | 0.801077 | 1.067266e-48 | -8.615850e-47 |
| Msa0921790 | Msa1149270 | 0.802965 | 4.367257e-49 | -8.615850e-47 |
| Msa0967780 | Msa1149270 | 0.803881 | 2.820531e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149270 | MtrunA17_Chr7g0238371 | 97.183 | 852 | 23 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1742 |
| Msa1149270 | MtrunA17_Chr1g0192121 | 51.222 | 859 | 371 | 13 | 17 | 852 | 52 | 885 | 0.0 | 891 |
| Msa1149270 | MtrunA17_Chr7g0272591 | 53.739 | 789 | 342 | 11 | 69 | 852 | 125 | 895 | 0.0 | 876 |
| Msa1149270 | MtrunA17_Chr8g0387591 | 52.375 | 800 | 350 | 9 | 68 | 852 | 161 | 944 | 0.0 | 876 |
| Msa1149270 | MtrunA17_Chr2g0301511 | 51.797 | 807 | 351 | 11 | 66 | 852 | 143 | 931 | 0.0 | 834 |
| Msa1149270 | MtrunA17_Chr3g0131401 | 50.752 | 798 | 354 | 13 | 72 | 852 | 148 | 923 | 0.0 | 823 |
| Msa1149270 | MtrunA17_Chr8g0385411 | 48.557 | 797 | 377 | 12 | 69 | 852 | 122 | 898 | 0.0 | 800 |
| Msa1149270 | MtrunA17_Chr3g0131381 | 47.001 | 817 | 380 | 16 | 69 | 852 | 121 | 917 | 0.0 | 728 |
| Msa1149270 | MtrunA17_Chr3g0131361 | 44.226 | 814 | 403 | 15 | 69 | 852 | 118 | 910 | 0.0 | 709 |
| Msa1149270 | MtrunA17_Chr4g0061441 | 44.361 | 798 | 393 | 11 | 64 | 852 | 75 | 830 | 0.0 | 696 |
| Msa1149270 | MtrunA17_Chr2g0291481 | 26.122 | 245 | 145 | 5 | 470 | 711 | 293 | 504 | 1.17e-19 | 94.4 |
| Msa1149270 | MtrunA17_Chr1g0202731 | 25.676 | 222 | 120 | 7 | 470 | 688 | 272 | 451 | 3.25e-14 | 77.0 |
| Msa1149270 | MtrunA17_Chr4g0058571 | 26.906 | 223 | 116 | 8 | 470 | 685 | 280 | 462 | 2.06e-13 | 74.3 |
| Msa1149270 | MtrunA17_Chr1g0202741 | 24.775 | 222 | 122 | 7 | 470 | 688 | 267 | 446 | 5.27e-13 | 72.8 |
| Msa1149270 | MtrunA17_Chr8g0349071 | 24.091 | 220 | 123 | 6 | 470 | 686 | 37 | 215 | 2.52e-11 | 65.9 |
| Msa1149270 | MtrunA17_Chr8g0348531 | 25.862 | 174 | 97 | 4 | 515 | 686 | 316 | 459 | 3.90e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149270 | AT5G60010.1 | 59.322 | 885 | 315 | 12 | 8 | 852 | 7 | 886 | 0.0 | 1083 |
| Msa1149270 | AT3G45810.1 | 57.612 | 913 | 322 | 9 | 2 | 852 | 3 | 912 | 0.0 | 1056 |
| Msa1149270 | AT1G64060.1 | 52.015 | 794 | 356 | 7 | 68 | 852 | 167 | 944 | 0.0 | 868 |
| Msa1149270 | AT5G47910.1 | 52.190 | 799 | 333 | 13 | 69 | 852 | 157 | 921 | 0.0 | 850 |
| Msa1149270 | AT5G51060.1 | 51.324 | 793 | 362 | 11 | 68 | 852 | 129 | 905 | 0.0 | 848 |
| Msa1149270 | AT1G09090.2 | 49.112 | 788 | 374 | 9 | 71 | 852 | 77 | 843 | 0.0 | 819 |
| Msa1149270 | AT1G19230.2 | 50.433 | 809 | 361 | 11 | 68 | 852 | 160 | 952 | 0.0 | 816 |
| Msa1149270 | AT4G25090.1 | 48.823 | 807 | 361 | 13 | 65 | 852 | 76 | 849 | 0.0 | 810 |
| Msa1149270 | AT1G19230.1 | 50.248 | 806 | 341 | 12 | 68 | 852 | 160 | 926 | 0.0 | 808 |
| Msa1149270 | AT4G25090.2 | 48.692 | 803 | 356 | 14 | 65 | 852 | 76 | 837 | 0.0 | 803 |
| Msa1149270 | AT5G07390.1 | 48.689 | 801 | 373 | 15 | 68 | 852 | 124 | 902 | 0.0 | 795 |
| Msa1149270 | AT4G11230.1 | 46.964 | 807 | 385 | 11 | 68 | 852 | 156 | 941 | 0.0 | 746 |
| Msa1149270 | AT5G07390.2 | 46.718 | 777 | 326 | 18 | 68 | 819 | 124 | 837 | 0.0 | 708 |
| Msa1149270 | AT1G09090.1 | 47.253 | 546 | 277 | 6 | 71 | 610 | 77 | 617 | 0.0 | 548 |
| Msa1149270 | AT5G50160.2 | 27.948 | 229 | 125 | 8 | 470 | 695 | 84 | 275 | 1.25e-20 | 97.1 |
| Msa1149270 | AT5G49740.1 | 25.879 | 398 | 223 | 17 | 305 | 690 | 148 | 485 | 3.03e-20 | 96.7 |
| Msa1149270 | AT5G50160.1 | 27.948 | 229 | 125 | 8 | 470 | 695 | 263 | 454 | 4.76e-20 | 95.9 |
| Msa1149270 | AT5G49740.3 | 25.879 | 398 | 223 | 17 | 305 | 690 | 148 | 485 | 9.09e-20 | 95.1 |
| Msa1149270 | AT5G49740.2 | 26.010 | 396 | 221 | 17 | 305 | 688 | 148 | 483 | 1.98e-19 | 93.6 |
| Msa1149270 | AT5G49730.1 | 28.194 | 227 | 125 | 7 | 470 | 690 | 282 | 476 | 2.85e-18 | 90.5 |
| Msa1149270 | AT5G49730.2 | 28.444 | 225 | 123 | 7 | 470 | 688 | 282 | 474 | 5.24e-18 | 89.0 |
| Msa1149270 | AT5G23990.1 | 28.936 | 235 | 119 | 7 | 457 | 688 | 206 | 395 | 5.53e-16 | 82.8 |
| Msa1149270 | AT5G23990.3 | 28.936 | 235 | 119 | 7 | 457 | 688 | 116 | 305 | 8.94e-16 | 82.0 |
| Msa1149270 | AT5G23990.2 | 28.829 | 222 | 112 | 6 | 470 | 688 | 259 | 437 | 2.04e-15 | 81.3 |
| Msa1149270 | AT5G23980.1 | 28.085 | 235 | 121 | 7 | 457 | 688 | 248 | 437 | 9.52e-15 | 79.0 |
| Msa1149270 | AT1G23020.2 | 26.818 | 220 | 117 | 8 | 470 | 686 | 300 | 478 | 1.10e-13 | 75.5 |
| Msa1149270 | AT1G23020.1 | 26.818 | 220 | 117 | 8 | 470 | 686 | 299 | 477 | 1.29e-13 | 75.5 |
| Msa1149270 | AT1G23020.5 | 26.818 | 220 | 117 | 8 | 470 | 686 | 299 | 477 | 1.29e-13 | 75.5 |
| Msa1149270 | AT1G23020.4 | 26.818 | 220 | 117 | 8 | 470 | 686 | 276 | 454 | 1.67e-13 | 75.1 |
| Msa1149270 | AT1G23020.3 | 26.818 | 220 | 117 | 8 | 470 | 686 | 276 | 454 | 1.67e-13 | 75.1 |
| Msa1149270 | AT1G23020.6 | 26.818 | 220 | 117 | 8 | 470 | 686 | 277 | 455 | 1.76e-13 | 74.7 |
| Msa1149270 | AT1G23020.7 | 26.818 | 220 | 117 | 8 | 470 | 686 | 273 | 451 | 1.88e-13 | 74.7 |
| Msa1149270 | AT1G01580.2 | 23.636 | 220 | 124 | 6 | 470 | 686 | 364 | 542 | 3.87e-13 | 73.9 |
| Msa1149270 | AT1G01580.1 | 23.636 | 220 | 124 | 6 | 470 | 686 | 286 | 464 | 5.66e-13 | 73.2 |
| Msa1149270 | AT1G01590.1 | 22.174 | 230 | 117 | 5 | 470 | 686 | 277 | 457 | 6.46e-12 | 69.7 |
Find 155 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCATCATTTGCTTATTC+TGG | 0.138321 | 7_4:+30536905 | Msa1149270:CDS |
| AATGAAAAGTACCAAGTTTA+TGG | 0.180253 | 7_4:-30536382 | None:intergenic |
| TGCTCATTGGTCTAGGAATT+GGG | 0.210810 | 7_4:+30538343 | Msa1149270:CDS |
| TTGCTCATTGGTCTAGGAAT+TGG | 0.238803 | 7_4:+30538342 | Msa1149270:CDS |
| CTCTAGTTTCCATCCTTATA+AGG | 0.245866 | 7_4:-30538135 | None:intergenic |
| ATGCTATCAAAAGACAAATT+TGG | 0.255259 | 7_4:+30534999 | Msa1149270:CDS |
| TGATCTTTACTCTTATAAAA+TGG | 0.257468 | 7_4:-30537136 | None:intergenic |
| AAATATGGATTATCGTTCTT+TGG | 0.257898 | 7_4:+30536355 | Msa1149270:CDS |
| GGCAGCTTGAAACTCTATTA+AGG | 0.266634 | 7_4:+30536187 | Msa1149270:CDS |
| CAAGAGGGCTTAAGGGTTTA+CGG | 0.270824 | 7_4:+30534892 | Msa1149270:CDS |
| ATTGCAGTTGGTGTAGTTAT+AGG | 0.287484 | 7_4:+30536609 | Msa1149270:CDS |
| AATAATATTAATATCAATAA+TGG | 0.289955 | 7_4:+30534837 | Msa1149270:CDS |
| GGTCCTTTGATGAGGATCTT+TGG | 0.299865 | 7_4:-30538276 | None:intergenic |
| ATGCTGCTCTTTCCTTGTAT+TGG | 0.302260 | 7_4:-30536416 | None:intergenic |
| TCACCGCGTGAACGTCATTA+AGG | 0.303134 | 7_4:+30537156 | Msa1149270:CDS |
| CCCCTTGGGATTGCACTTTG+AGG | 0.309571 | 7_4:-30538109 | None:intergenic |
| ATAGAACTCCTATTAGAAAA+TGG | 0.310630 | 7_4:+30536292 | Msa1149270:CDS |
| GAATTACTTTGAATCAAGTT+AGG | 0.312333 | 7_4:+30535227 | Msa1149270:CDS |
| TAATGTGGAAGTTCCTAAAA+AGG | 0.317728 | 7_4:+30534728 | Msa1149270:CDS |
| AGAAATATATGTGCAGAAAA+TGG | 0.319306 | 7_4:+30535205 | Msa1149270:CDS |
| TTTCTTGATAGAACGGTTAC+AGG | 0.326365 | 7_4:+30534915 | Msa1149270:CDS |
| TGCAAGACCAAACTGGAAAA+AGG | 0.326699 | 7_4:+30539290 | Msa1149270:CDS |
| ACCTTCGCCGTTGCATCATT+TGG | 0.328818 | 7_4:+30536860 | Msa1149270:CDS |
| TGGCCGGATTCAACTCCTTT+TGG | 0.332041 | 7_4:+30536880 | Msa1149270:CDS |
| TGTGTTCTTGTACCAAGTTT+TGG | 0.346518 | 7_4:-30536237 | None:intergenic |
| TTTACGCAACATGCAGTTGA+TGG | 0.348553 | 7_4:+30534975 | Msa1149270:CDS |
| GAGGACTTGCCATCTTCATT+TGG | 0.350150 | 7_4:-30538404 | None:intergenic |
| TCCTTATAAGGCTTCCCCTT+GGG | 0.355423 | 7_4:-30538123 | None:intergenic |
| TTCATAAAGAGAACTTCTAA+TGG | 0.356851 | 7_4:+30540627 | Msa1149270:CDS |
| AGGTGCTGCAAGAGGGCTTA+AGG | 0.358329 | 7_4:+30534884 | Msa1149270:CDS |
| GTCGGACAAGAAACTATTCT+TGG | 0.361255 | 7_4:-30536672 | None:intergenic |
| GTACAGATGAATCATCAAAA+TGG | 0.362238 | 7_4:+30534679 | Msa1149270:CDS |
| TCCCAAGGGGAAGCCTTATA+AGG | 0.365752 | 7_4:+30538122 | Msa1149270:CDS |
| ACAAGTCCTCCTGGTATAAC+TGG | 0.377307 | 7_4:+30536762 | Msa1149270:CDS |
| CATTCAAAACTAGATATATC+TGG | 0.379978 | 7_4:-30537360 | None:intergenic |
| TGAAACTCTATTAAGGGAAA+TGG | 0.381478 | 7_4:+30536194 | Msa1149270:CDS |
| GAAAGTATCCATGTATGATT+AGG | 0.382017 | 7_4:-30536938 | None:intergenic |
| ATATAAGAACCTTAGGAGAT+TGG | 0.397795 | 7_4:+30537531 | Msa1149270:CDS |
| TCTTTCAAAATACTTATCAT+TGG | 0.399500 | 7_4:-30538372 | None:intergenic |
| GTAGTTCCACTAGTGCTCTA+TGG | 0.402421 | 7_4:+30537097 | Msa1149270:CDS |
| TAATTATGCTTCTTTGATCA+TGG | 0.411093 | 7_4:+30536039 | Msa1149270:CDS |
| TTTCTAATATTGATAATTTG+AGG | 0.414832 | 7_4:+30534799 | Msa1149270:CDS |
| GGTGCTGCAAGAGGGCTTAA+GGG | 0.416339 | 7_4:+30534885 | Msa1149270:CDS |
| GCTTTGTGCTGGTGCTCCAT+AGG | 0.424489 | 7_4:-30538298 | None:intergenic |
| AGTGTTCATATAAGAACCTT+AGG | 0.429591 | 7_4:+30537524 | Msa1149270:CDS |
| GTGTTCTTCTACACATTGTA+AGG | 0.432326 | 7_4:-30536515 | None:intergenic |
| GGGAGCAAGCTTCATTTGAA+TGG | 0.445173 | 7_4:+30538905 | Msa1149270:CDS |
| ATCCTTATAAGGCTTCCCCT+TGG | 0.445531 | 7_4:-30538124 | None:intergenic |
| CACCTCCTTCACCTCCTCTT+CGG | 0.445645 | 7_4:-30535737 | None:intergenic |
| TATGATGTACTCTTGCTCAT+TGG | 0.447007 | 7_4:+30538330 | Msa1149270:CDS |
| GTACTCTTGCTCATTGGTCT+AGG | 0.449393 | 7_4:+30538336 | Msa1149270:CDS |
| TGGAAGCAAAATGCGAAGAA+TGG | 0.455353 | 7_4:+30534857 | Msa1149270:CDS |
| AGAGCAGCATATGAAGTAAT+GGG | 0.455926 | 7_4:+30536429 | Msa1149270:CDS |
| AGGCTGCTTATAATCAAAAC+CGG | 0.457705 | 7_4:-30536721 | None:intergenic |
| GAAAGCGGGTAGATGTGTTT+AGG | 0.458595 | 7_4:-30540601 | None:intergenic |
| TCTATATATCCATTATGATC+TGG | 0.460686 | 7_4:-30536073 | None:intergenic |
| TTCTATTTCTCACAAAGGAT+TGG | 0.462234 | 7_4:+30536958 | Msa1149270:CDS |
| CAGAATTTGTAAATGAAAAG+TGG | 0.463230 | 7_4:+30536328 | Msa1149270:CDS |
| AGTGCTTCTGCGAATAGATT+GGG | 0.463469 | 7_4:+30535995 | Msa1149270:CDS |
| TTGATGTAGTTTCAGAAAGC+CGG | 0.466256 | 7_4:+30539159 | Msa1149270:CDS |
| AAGTTTATGTTGTCATCAAA+AGG | 0.476309 | 7_4:-30536576 | None:intergenic |
| GACAAATTTGGACAATGCGT+TGG | 0.481203 | 7_4:+30535011 | Msa1149270:CDS |
| GCAGCTTGAAACTCTATTAA+GGG | 0.484143 | 7_4:+30536188 | Msa1149270:CDS |
| ACCCTTGTTACAAGTCCTCC+TGG | 0.485099 | 7_4:+30536753 | Msa1149270:CDS |
| GAGCTTGATCCAGATCATAA+TGG | 0.486770 | 7_4:+30536064 | Msa1149270:CDS |
| TTGGAAGTTTCTCCAATACA+AGG | 0.490350 | 7_4:+30536404 | Msa1149270:CDS |
| ATATTGATAATTTGAGGAGC+AGG | 0.490860 | 7_4:+30534805 | Msa1149270:CDS |
| CTTTGTGCTGGTGCTCCATA+GGG | 0.490877 | 7_4:-30538297 | None:intergenic |
| ACACACGAAAGTTCTCGAAT+AGG | 0.491276 | 7_4:+30539333 | Msa1149270:CDS |
| ATCCTCATCAAAGGACCCTA+TGG | 0.491725 | 7_4:+30538282 | Msa1149270:CDS |
| AATTACTTTGAATCAAGTTA+GGG | 0.492462 | 7_4:+30535228 | Msa1149270:CDS |
| GAGTGCTTCTGCGAATAGAT+TGG | 0.496450 | 7_4:+30535994 | Msa1149270:CDS |
| AAGAGCAGCATATGAAGTAA+TGG | 0.497578 | 7_4:+30536428 | Msa1149270:CDS |
| ATACTTGAATCCTTGTGGCC+TGG | 0.497823 | 7_4:-30537307 | None:intergenic |
| AAAATGCGAAGAATGGAATC+AGG | 0.504037 | 7_4:+30534864 | Msa1149270:CDS |
| TTCTCCATCACATCTGCACC+TGG | 0.509636 | 7_4:+30537488 | Msa1149270:CDS |
| CACTTATTGCCATGATTCAG+AGG | 0.509830 | 7_4:+30539114 | Msa1149270:CDS |
| ATCTCCAGGTGCAGATGTGA+TGG | 0.510714 | 7_4:-30537492 | None:intergenic |
| ATGTTGCAGCCTCTGAATCA+TGG | 0.518777 | 7_4:-30539123 | None:intergenic |
| GTAACAAGGGTCAAGTAACT+AGG | 0.520469 | 7_4:-30536741 | None:intergenic |
| TATCTTGAACCAAATGAAGA+TGG | 0.520669 | 7_4:+30538395 | Msa1149270:CDS |
| TGATGTAGTTTCAGAAAGCC+GGG | 0.521880 | 7_4:+30539160 | Msa1149270:CDS |
| CTTTGATACTTGAATCCTTG+TGG | 0.521989 | 7_4:-30537312 | None:intergenic |
| CATGTTGAATTTGAGAGTCT+CGG | 0.523605 | 7_4:-30536481 | None:intergenic |
| CTATTTGACTAGTGTCTATG+AGG | 0.523871 | 7_4:+30539073 | Msa1149270:CDS |
| TTTATGGCGATACTTGGATC+CGG | 0.524679 | 7_4:+30536702 | Msa1149270:CDS |
| TTCTGTAGTCCAATCTCCTA+AGG | 0.529329 | 7_4:-30537540 | None:intergenic |
| ATACCAAAAGGAGTTGAATC+CGG | 0.535207 | 7_4:-30536883 | None:intergenic |
| AGATCATAATGGATATATAG+AGG | 0.536287 | 7_4:+30536075 | Msa1149270:CDS |
| TCGCCGTTGCATCATTTGGC+CGG | 0.536324 | 7_4:+30536864 | Msa1149270:CDS |
| CATTGAGATCGTTCCTAATG+TGG | 0.536666 | 7_4:+30534713 | Msa1149270:CDS |
| GCTTCATTTGAATGGTTCAA+AGG | 0.539793 | 7_4:+30538913 | Msa1149270:CDS |
| GCTCATTGGTCTAGGAATTG+GGG | 0.541341 | 7_4:+30538344 | Msa1149270:CDS |
| CTCCATAGGGTCCTTTGATG+AGG | 0.543105 | 7_4:-30538284 | None:intergenic |
| TAATGCTTATAGCTTTGTGC+TGG | 0.545684 | 7_4:-30538309 | None:intergenic |
| TTTCATAAGATCATTGCAGT+TGG | 0.547192 | 7_4:+30536597 | Msa1149270:CDS |
| TTTACGGTTTCTTGATAGAA+CGG | 0.547318 | 7_4:+30534908 | Msa1149270:CDS |
| CTCTTTATGAAACTGAAAGC+GGG | 0.547870 | 7_4:-30540615 | None:intergenic |
| TCTTTGGTTAGCCATAAACT+TGG | 0.547949 | 7_4:+30536371 | Msa1149270:CDS |
| CAAAATACTTATCATTGGTG+TGG | 0.549167 | 7_4:-30538367 | None:intergenic |
| GGATGAAGAAAATGAAAGCA+AGG | 0.553874 | 7_4:+30534749 | Msa1149270:CDS |
| GAAGATGGCAAACCAAAACT+TGG | 0.555673 | 7_4:+30536225 | Msa1149270:CDS |
| GTTATCCGAAGAGGAGGTGA+AGG | 0.559178 | 7_4:+30535732 | Msa1149270:CDS |
| TTCAATGTTTGTGTAAGAGT+AGG | 0.563679 | 7_4:-30540557 | None:intergenic |
| CAAATGATGAGCATACCAAA+AGG | 0.564237 | 7_4:-30536895 | None:intergenic |
| GCCAAATGATGCAACGGCGA+AGG | 0.566068 | 7_4:-30536861 | None:intergenic |
| TATATACTCCTAATCATACA+TGG | 0.568325 | 7_4:+30536930 | Msa1149270:CDS |
| GGTGCAGATGTGATGGAGAA+AGG | 0.569583 | 7_4:-30537485 | None:intergenic |
| AACCTCAAAGTGCAATCCCA+AGG | 0.570159 | 7_4:+30538107 | Msa1149270:CDS |
| CAGGTAAAGAAGCTGATGCA+TGG | 0.571525 | 7_4:+30534934 | Msa1149270:CDS |
| AAGGGGAAGCCTTATAAGGA+TGG | 0.571783 | 7_4:+30538126 | Msa1149270:CDS |
| TCAGTACCATAGAGCACTAG+TGG | 0.572417 | 7_4:-30537103 | None:intergenic |
| TACCAGGAGGACTTGTAACA+AGG | 0.575725 | 7_4:-30536755 | None:intergenic |
| TTGACTAGTGTCTATGAGGA+AGG | 0.577395 | 7_4:+30539077 | Msa1149270:CDS |
| AACTATATGAGGCACTTGCA+AGG | 0.582128 | 7_4:+30535179 | Msa1149270:CDS |
| TCGTTGTCACTTACGTGTTG+AGG | 0.582241 | 7_4:-30538423 | None:intergenic |
| AGCTCCGACGAAGATAGAAA+AGG | 0.582277 | 7_4:+30538850 | Msa1149270:CDS |
| AGGTGTGACAAGAATGGAGA+TGG | 0.584789 | 7_4:+30535706 | Msa1149270:intron |
| AGGTATGGGAGCAGATTCAA+AGG | 0.586035 | 7_4:+30535144 | Msa1149270:intron |
| CAAGGATTCAAGTATCAAAG+TGG | 0.587965 | 7_4:+30537315 | Msa1149270:CDS |
| GAAATGGTTAGTGCAGAAGA+TGG | 0.590009 | 7_4:+30536210 | Msa1149270:CDS |
| CATAACAGGAAAGGTCTGAG+AGG | 0.592436 | 7_4:+30538809 | Msa1149270:intron |
| ACACTCAAGTAATCATCTCC+AGG | 0.593039 | 7_4:-30537506 | None:intergenic |
| ATAGGAACTTTAATCCATGT+AGG | 0.594439 | 7_4:+30536627 | Msa1149270:CDS |
| ACTTAGAAACATATTTGCAA+AGG | 0.597998 | 7_4:+30537562 | Msa1149270:CDS |
| TGAATGGTTCAAAGGTGTCA+TGG | 0.602687 | 7_4:+30538921 | Msa1149270:CDS |
| ATGGAATCAGGTGCTGCAAG+AGG | 0.602851 | 7_4:+30534876 | Msa1149270:CDS |
| TCTCTTTATGAAACTGAAAG+CGG | 0.605994 | 7_4:-30540616 | None:intergenic |
| GTCGGAGCTATTGCTACTGA+AGG | 0.606452 | 7_4:-30538836 | None:intergenic |
| TTCTAGCACTATACATGACC+AGG | 0.607954 | 7_4:+30537289 | Msa1149270:CDS |
| ACCTCAAAGTGCAATCCCAA+GGG | 0.609156 | 7_4:+30538108 | Msa1149270:CDS |
| CGAGACTCTCAAATTCAACA+TGG | 0.610306 | 7_4:+30536482 | Msa1149270:CDS |
| TATCCAAAGATCCTCATCAA+AGG | 0.614918 | 7_4:+30538273 | Msa1149270:CDS |
| GTGACAAGAATGGAGATGGT+AGG | 0.616832 | 7_4:+30535710 | Msa1149270:CDS |
| ATCCGAAGAGGAGGTGAAGG+AGG | 0.621410 | 7_4:+30535735 | Msa1149270:CDS |
| ATGAAAATTCCAGTTATACC+AGG | 0.623236 | 7_4:-30536771 | None:intergenic |
| ATAGGAGTTCTATACTTGCA+CGG | 0.623551 | 7_4:-30536282 | None:intergenic |
| TGGAATCAGGTGCTGCAAGA+GGG | 0.624765 | 7_4:+30534877 | Msa1149270:CDS |
| AAGATACGTGAATTCCTACA+TGG | 0.624851 | 7_4:-30536641 | None:intergenic |
| ACCAGGAGGACTTGTAACAA+GGG | 0.625491 | 7_4:-30536754 | None:intergenic |
| TTTCAGGCAATAATATACAC+AGG | 0.626612 | 7_4:+30537261 | Msa1149270:intron |
| CTATACATGACCAGGCCACA+AGG | 0.631046 | 7_4:+30537297 | Msa1149270:CDS |
| AATCCGGCCAAATGATGCAA+CGG | 0.631280 | 7_4:-30536867 | None:intergenic |
| ATACTTTCTATTTCTCACAA+AGG | 0.632880 | 7_4:+30536953 | Msa1149270:CDS |
| TTAGGCTAAACTCTTGACAA+AGG | 0.636508 | 7_4:-30540583 | None:intergenic |
| TGGTAGGTTATCCGAAGAGG+AGG | 0.636836 | 7_4:+30535726 | Msa1149270:CDS |
| ATAACAGGAAAGGTCTGAGA+GGG | 0.645726 | 7_4:+30538810 | Msa1149270:intron |
| AGAGCACTAGTGGAACTACA+AGG | 0.645965 | 7_4:-30537093 | None:intergenic |
| AGATGGTAGGTTATCCGAAG+AGG | 0.659477 | 7_4:+30535723 | Msa1149270:CDS |
| AAAGGATTGGCATAAGAAGA+CGG | 0.663961 | 7_4:+30536971 | Msa1149270:CDS |
| AGAACACTTACAAAGTTACG+AGG | 0.706746 | 7_4:+30536531 | Msa1149270:CDS |
| GTATTGACAATTCAAAACCA+AGG | 0.707286 | 7_4:+30538173 | Msa1149270:CDS |
| ATACCTTAATGACGTTCACG+CGG | 0.717609 | 7_4:-30537159 | None:intergenic |
| AAAATTCCAGTTATACCAGG+AGG | 0.721195 | 7_4:-30536768 | None:intergenic |
| CCTCAAAGTGCAATCCCAAG+GGG | 0.727531 | 7_4:+30538109 | Msa1149270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAACTTTAGAT+AGG | + | chr7_4:30535497-30535516 | Msa1149270:intron | 10.0% |
| !!! | ATATAAAACTTTGTTAATTT+TGG | - | chr7_4:30538730-30538749 | None:intergenic | 10.0% |
| !!! | TATTACTTTTAATTACAAAT+CGG | + | chr7_4:30539421-30539440 | Msa1149270:intron | 10.0% |
| !!! | TTTATATGAGAAAATATTTT+TGG | - | chr7_4:30540439-30540458 | None:intergenic | 10.0% |
| !!! | TTTCTAATATTGATAATTTG+AGG | + | chr7_4:30534799-30534818 | Msa1149270:CDS | 15.0% |
| !!! | TTTGTTTTTAATGATTTTAG+TGG | + | chr7_4:30535073-30535092 | Msa1149270:intron | 15.0% |
| !!! | TGAATATGTTTTTAGAATTA+CGG | + | chr7_4:30537837-30537856 | Msa1149270:intron | 15.0% |
| !! | TATTATTCTCAAATTATTAC+CGG | + | chr7_4:30538524-30538543 | Msa1149270:intron | 15.0% |
| !! | ACTAAAAGTTAATCTAAATT+AGG | + | chr7_4:30538704-30538723 | Msa1149270:intron | 15.0% |
| !!! | TAGAAATTCACATTTTTTTT+AGG | + | chr7_4:30539724-30539743 | Msa1149270:intron | 15.0% |
| !!! | AGAAATTCACATTTTTTTTA+GGG | + | chr7_4:30539725-30539744 | Msa1149270:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr7_4:30540212-30540231 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr7_4:30540211-30540230 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr7_4:30540120-30540139 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr7_4:30540020-30540039 | Msa1149270:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr7_4:30540211-30540230 | Msa1149270:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr7_4:30540212-30540231 | Msa1149270:intron | 15.0% |
| !!! | ATAATTAACCCTTTTTTTTA+AGG | + | chr7_4:30540275-30540294 | Msa1149270:intron | 15.0% |
| !!! | TTGATTTTTAGTAAAATCAT+CGG | - | chr7_4:30540414-30540433 | None:intergenic | 15.0% |
| !! | TTGAAAACAATGTTGTATAT+AGG | + | chr7_4:30535124-30535143 | Msa1149270:intron | 20.0% |
| !! | AATTACTTTGAATCAAGTTA+GGG | + | chr7_4:30535228-30535247 | Msa1149270:CDS | 20.0% |
| !! | TTCATTTAACATGAAAAAGT+AGG | - | chr7_4:30535639-30535658 | None:intergenic | 20.0% |
| !! | ATATCTCGTTACAATTTAAT+CGG | - | chr7_4:30536117-30536136 | None:intergenic | 20.0% |
| !! | ATGAAAAGTGGAAAAAAATA+TGG | + | chr7_4:30536340-30536359 | Msa1149270:CDS | 20.0% |
| !! | TGATCTTTACTCTTATAAAA+TGG | - | chr7_4:30537139-30537158 | None:intergenic | 20.0% |
| !!! | ATTTTTATTTATGCTGAAAC+AGG | + | chr7_4:30537215-30537234 | Msa1149270:intron | 20.0% |
| !! | TATTACTAGTTGAAAATTTC+AGG | + | chr7_4:30537245-30537264 | Msa1149270:intron | 20.0% |
| !!! | AACGTATCCATTATTTTTAA+AGG | + | chr7_4:30537957-30537976 | Msa1149270:intron | 20.0% |
| !!! | CAACAATTATCATATTTCTA+AGG | - | chr7_4:30538038-30538057 | None:intergenic | 20.0% |
| !! | ATAAGTACATCATAACATTA+TGG | - | chr7_4:30538227-30538246 | None:intergenic | 20.0% |
| !! | TCTTTCAAAATACTTATCAT+TGG | - | chr7_4:30538375-30538394 | None:intergenic | 20.0% |
| !!! | ACTAATTCTTTAGATACTTT+TGG | - | chr7_4:30538607-30538626 | None:intergenic | 20.0% |
| !!! | AAGTTTTATATACTTTGTGT+AGG | + | chr7_4:30538739-30538758 | Msa1149270:intron | 20.0% |
| !!! | TGAAAGAGCATATTTTTATT+GGG | + | chr7_4:30538876-30538895 | Msa1149270:CDS | 20.0% |
| !!! | ATATTTTTATTGGGTAACAA+GGG | + | chr7_4:30538885-30538904 | Msa1149270:CDS | 20.0% |
| !! | TATGATAAAAGCTTAATCTT+TGG | - | chr7_4:30539236-30539255 | None:intergenic | 20.0% |
| !!! | ACATTTTCTTAAATCACTTA+GGG | - | chr7_4:30539394-30539413 | None:intergenic | 20.0% |
| !!! | AACATTTTCTTAAATCACTT+AGG | - | chr7_4:30539395-30539414 | None:intergenic | 20.0% |
| !!! | TTTGTTATGGTTTTAAATTC+TGG | + | chr7_4:30539508-30539527 | Msa1149270:intron | 20.0% |
| !! | TGCTGAAAATCTTTATATTA+CGG | + | chr7_4:30539543-30539562 | Msa1149270:intron | 20.0% |
| !! | CAACAAAAAAAAAAATGAAC+AGG | - | chr7_4:30539687-30539706 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr7_4:30540055-30540074 | Msa1149270:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr7_4:30540149-30540168 | Msa1149270:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr7_4:30540150-30540169 | Msa1149270:intron | 20.0% |
| !! | CTTATTCACCTTAAAAAAAA+GGG | - | chr7_4:30540286-30540305 | None:intergenic | 20.0% |
| !! | ACTTATTCACCTTAAAAAAA+AGG | - | chr7_4:30540287-30540306 | None:intergenic | 20.0% |
| !!! | TGATTTTCAAAGATTTGAAT+AGG | - | chr7_4:30540374-30540393 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGAGTCTATTTG+AGG | + | chr7_4:30540454-30540473 | Msa1149270:intron | 20.0% |
| !! | TCATTTTCTTCATCCTTTTT+AGG | - | chr7_4:30534744-30534763 | None:intergenic | 25.0% |
| ! | ATGCTATCAAAAGACAAATT+TGG | + | chr7_4:30534999-30535018 | Msa1149270:CDS | 25.0% |
| ! | AACAATGTTGTATATAGGTA+TGG | + | chr7_4:30535129-30535148 | Msa1149270:intron | 25.0% |
| ! | ACAATGTTGTATATAGGTAT+GGG | + | chr7_4:30535130-30535149 | Msa1149270:intron | 25.0% |
| ! | AGAAATATATGTGCAGAAAA+TGG | + | chr7_4:30535205-30535224 | Msa1149270:CDS | 25.0% |
| ! | GAATTACTTTGAATCAAGTT+AGG | + | chr7_4:30535227-30535246 | Msa1149270:CDS | 25.0% |
| ! | TAAAGTTATTAACATGCGAA+AGG | - | chr7_4:30535351-30535370 | None:intergenic | 25.0% |
| ! | GCATGTTAATAACTTTAGAT+AGG | + | chr7_4:30535354-30535373 | Msa1149270:intron | 25.0% |
| ! | AACTTTAGATAGGCAAATAT+TGG | + | chr7_4:30535507-30535526 | Msa1149270:intron | 25.0% |
| ! | ATGAATGATTTCATATTGAG+TGG | + | chr7_4:30535654-30535673 | Msa1149270:intron | 25.0% |
| ! | ATTGAGTGGAGATATATAAA+TGG | + | chr7_4:30535668-30535687 | Msa1149270:intron | 25.0% |
| !! | TCTAACTCTTTTTGTGTAAA+AGG | + | chr7_4:30535961-30535980 | Msa1149270:intron | 25.0% |
| ! | TAATTATGCTTCTTTGATCA+TGG | + | chr7_4:30536039-30536058 | Msa1149270:CDS | 25.0% |
| ! | TCTATATATCCATTATGATC+TGG | - | chr7_4:30536076-30536095 | None:intergenic | 25.0% |
| !!! | AGATCATAATGGATATATAG+AGG | + | chr7_4:30536075-30536094 | Msa1149270:CDS | 25.0% |
| ! | ATAGAACTCCTATTAGAAAA+TGG | + | chr7_4:30536292-30536311 | Msa1149270:CDS | 25.0% |
| !! | TTTGTGATCCATTTTCTAAT+AGG | - | chr7_4:30536303-30536322 | None:intergenic | 25.0% |
| !! | CTTTTCATTTACAAATTCTG+CGG | - | chr7_4:30536328-30536347 | None:intergenic | 25.0% |
| ! | CAGAATTTGTAAATGAAAAG+TGG | + | chr7_4:30536328-30536347 | Msa1149270:CDS | 25.0% |
| !! | AAATATGGATTATCGTTCTT+TGG | + | chr7_4:30536355-30536374 | Msa1149270:CDS | 25.0% |
| !!! | AATGAAAAGTACCAAGTTTA+TGG | - | chr7_4:30536385-30536404 | None:intergenic | 25.0% |
| !! | TAAACTTGGTACTTTTCATT+TGG | + | chr7_4:30536385-30536404 | Msa1149270:CDS | 25.0% |
| ! | AAGTTTATGTTGTCATCAAA+AGG | - | chr7_4:30536579-30536598 | None:intergenic | 25.0% |
| !!! | AAGTATCGCCATAAATTTTT+CGG | - | chr7_4:30536697-30536716 | None:intergenic | 25.0% |
| !!! | AATTTTCATGGTCTTGATTA+TGG | + | chr7_4:30536785-30536804 | Msa1149270:CDS | 25.0% |
| ! | TATATACTCCTAATCATACA+TGG | + | chr7_4:30536930-30536949 | Msa1149270:CDS | 25.0% |
| !! | ATACTTTCTATTTCTCACAA+AGG | + | chr7_4:30536953-30536972 | Msa1149270:CDS | 25.0% |
| ! | CATTCAAAACTAGATATATC+TGG | - | chr7_4:30537363-30537382 | None:intergenic | 25.0% |
| !!! | CAGATATATCTAGTTTTGAA+TGG | + | chr7_4:30537361-30537380 | Msa1149270:CDS | 25.0% |
| ! | AATGGTAATTATGATCTACT+TGG | + | chr7_4:30537379-30537398 | Msa1149270:intron | 25.0% |
| !!! | CTGCAAAATTACTTTTACTT+AGG | + | chr7_4:30537432-30537451 | Msa1149270:intron | 25.0% |
| ! | ACTTAGAAACATATTTGCAA+AGG | + | chr7_4:30537562-30537581 | Msa1149270:CDS | 25.0% |
| !! | AAAAATTGAACCACGATTTT+TGG | + | chr7_4:30537883-30537902 | Msa1149270:intron | 25.0% |
| !! | AGTCAAGCCTTTAAAAATAA+TGG | - | chr7_4:30537967-30537986 | None:intergenic | 25.0% |
| !!! | AAACACCCGTTTTTATAAAA+AGG | + | chr7_4:30537989-30538008 | Msa1149270:intron | 25.0% |
| !! | TCCTACCTTTTTATAAAAAC+GGG | - | chr7_4:30537997-30538016 | None:intergenic | 25.0% |
| !! | CTCCTACCTTTTTATAAAAA+CGG | - | chr7_4:30537998-30538017 | None:intergenic | 25.0% |
| !! | TTTTTAGATGATCTCTCATT+AGG | + | chr7_4:30538635-30538654 | Msa1149270:intron | 25.0% |
| ! | ATTTACGGTTTATGTTTATG+TGG | - | chr7_4:30538663-30538682 | None:intergenic | 25.0% |
| ! | CAATAAAAATATGCTCTTTC+AGG | - | chr7_4:30538877-30538896 | None:intergenic | 25.0% |
| !!! | CTGAAAGAGCATATTTTTAT+TGG | + | chr7_4:30538875-30538894 | Msa1149270:CDS | 25.0% |
| !!! | CATATTTTTATTGGGTAACA+AGG | + | chr7_4:30538884-30538903 | Msa1149270:CDS | 25.0% |
| ! | AGGTAAAAAAGCAAAAAGTT+TGG | - | chr7_4:30538986-30539005 | None:intergenic | 25.0% |
| !! | TCTAAAATTGTGTTACATTG+AGG | - | chr7_4:30539006-30539025 | None:intergenic | 25.0% |
| ! | GAACTAAATCAAAATATACC+CGG | - | chr7_4:30539181-30539200 | None:intergenic | 25.0% |
| ! | CATTTGAAAACAGAAAATGA+CGG | - | chr7_4:30539458-30539477 | None:intergenic | 25.0% |
| !! | TCTGTTTTCAAATGTTTGTA+TGG | + | chr7_4:30539464-30539483 | Msa1149270:intron | 25.0% |
| !! | CAAATTTTGTGTCTTTGTTA+TGG | + | chr7_4:30539495-30539514 | Msa1149270:intron | 25.0% |
| !! | AAAGATTTTCAGCATAACAA+CGG | - | chr7_4:30539537-30539556 | None:intergenic | 25.0% |
| ! | CTTTATATTACGGAAAAATG+TGG | + | chr7_4:30539553-30539572 | Msa1149270:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr7_4:30539860-30539879 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr7_4:30539861-30539880 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr7_4:30540183-30540202 | Msa1149270:intron | 25.0% |
| !! | TTACAAGGTCACTATTTTAT+AGG | + | chr7_4:30540242-30540261 | Msa1149270:intron | 25.0% |
| !! | TACAAGGTCACTATTTTATA+GGG | + | chr7_4:30540243-30540262 | Msa1149270:intron | 25.0% |
| !!! | TTTTTTAAGGTGAATAAGTG+AGG | + | chr7_4:30540288-30540307 | Msa1149270:intron | 25.0% |
| GTACAGATGAATCATCAAAA+TGG | + | chr7_4:30534679-30534698 | Msa1149270:CDS | 30.0% | |
| !! | TTTTTAGGAACTTCCACATT+AGG | - | chr7_4:30534729-30534748 | None:intergenic | 30.0% |
| TAATGTGGAAGTTCCTAAAA+AGG | + | chr7_4:30534728-30534747 | Msa1149270:CDS | 30.0% | |
| ! | ATATTGATAATTTGAGGAGC+AGG | + | chr7_4:30534805-30534824 | Msa1149270:CDS | 30.0% |
| TTTACGGTTTCTTGATAGAA+CGG | + | chr7_4:30534908-30534927 | Msa1149270:CDS | 30.0% | |
| !!! | TGAATCAAGTTAGGGTTTTT+TGG | + | chr7_4:30535236-30535255 | Msa1149270:CDS | 30.0% |
| !!! | GAATCAAGTTAGGGTTTTTT+GGG | + | chr7_4:30535237-30535256 | Msa1149270:CDS | 30.0% |
| TAATCGAACATGAGACTTTA+AGG | - | chr7_4:30535437-30535456 | None:intergenic | 30.0% | |
| ! | TTACTATTTTCTCCTTCATC+CGG | + | chr7_4:30535549-30535568 | Msa1149270:intron | 30.0% |
| AAAATGTTGAAGCAGCTAAA+AGG | - | chr7_4:30535589-30535608 | None:intergenic | 30.0% | |
| !!! | AATGGACTAAAGTCATTTTC+AGG | + | chr7_4:30535686-30535705 | Msa1149270:intron | 30.0% |
| TGCTTCATAGGAAACAAAAT+AGG | - | chr7_4:30535793-30535812 | None:intergenic | 30.0% | |
| TGAAACTCTATTAAGGGAAA+TGG | + | chr7_4:30536194-30536213 | Msa1149270:CDS | 30.0% | |
| TTTCATAAGATCATTGCAGT+TGG | + | chr7_4:30536597-30536616 | Msa1149270:CDS | 30.0% | |
| ATAGGAACTTTAATCCATGT+AGG | + | chr7_4:30536627-30536646 | Msa1149270:CDS | 30.0% | |
| GAAAAATTTATGGCGATACT+TGG | + | chr7_4:30536696-30536715 | Msa1149270:CDS | 30.0% | |
| ATGAAAATTCCAGTTATACC+AGG | - | chr7_4:30536774-30536793 | None:intergenic | 30.0% | |
| ! | TGGTATAACTGGAATTTTCA+TGG | + | chr7_4:30536773-30536792 | Msa1149270:CDS | 30.0% |
| ! | TATGGCTTTTACTTTCACTT+TGG | + | chr7_4:30536803-30536822 | Msa1149270:CDS | 30.0% |
| !! | GAAAGTATCCATGTATGATT+AGG | - | chr7_4:30536941-30536960 | None:intergenic | 30.0% |
| ! | TTCTATTTCTCACAAAGGAT+TGG | + | chr7_4:30536958-30536977 | Msa1149270:CDS | 30.0% |
| ATTCTTTCTAAATGCAGACT+TGG | + | chr7_4:30537065-30537084 | Msa1149270:intron | 30.0% | |
| TTTCAGGCAATAATATACAC+AGG | + | chr7_4:30537261-30537280 | Msa1149270:intron | 30.0% | |
| ! | TCGAATTTACTCTTTTGTAC+AGG | + | chr7_4:30537459-30537478 | Msa1149270:intron | 30.0% |
| AGTGTTCATATAAGAACCTT+AGG | + | chr7_4:30537524-30537543 | Msa1149270:CDS | 30.0% | |
| ATATAAGAACCTTAGGAGAT+TGG | + | chr7_4:30537531-30537550 | Msa1149270:CDS | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr7_4:30537718-30537737 | Msa1149270:intron | 30.0% | |
| AGTCAAGGTTTATCAGAAAT+AGG | + | chr7_4:30537812-30537831 | Msa1149270:intron | 30.0% | |
| !! | ACCCGTTTTTATAAAAAGGT+AGG | + | chr7_4:30537993-30538012 | Msa1149270:intron | 30.0% |
| ! | GTATTGACAATTCAAAACCA+AGG | + | chr7_4:30538173-30538192 | Msa1149270:CDS | 30.0% |
| CAAAATACTTATCATTGGTG+TGG | - | chr7_4:30538370-30538389 | None:intergenic | 30.0% | |
| TATCTTGAACCAAATGAAGA+TGG | + | chr7_4:30538395-30538414 | Msa1149270:CDS | 30.0% | |
| !! | ATCTAAAGTGTTGGTCAAAT+CGG | - | chr7_4:30538450-30538469 | None:intergenic | 30.0% |
| GATCTTTCGTTCTTCATTTA+CGG | - | chr7_4:30538678-30538697 | None:intergenic | 30.0% | |
| CTTAGAGTTAACAACATAAC+AGG | + | chr7_4:30538795-30538814 | Msa1149270:intron | 30.0% | |
| AGTTAACAACATAACAGGAA+AGG | + | chr7_4:30538800-30538819 | Msa1149270:intron | 30.0% | |
| AATGTGTTCTTATCTGCATA+TGG | - | chr7_4:30539269-30539288 | None:intergenic | 30.0% | |
| ! | CCTCAATATTAAGGATTTTG+AGG | - | chr7_4:30539620-30539639 | None:intergenic | 30.0% |
| CCTCAAAATCCTTAATATTG+AGG | + | chr7_4:30539617-30539636 | Msa1149270:intron | 30.0% | |
| AAATTGTGGCCTCAATATTA+AGG | - | chr7_4:30539629-30539648 | None:intergenic | 30.0% | |
| AAATGAACAGGAAACAATCA+TGG | - | chr7_4:30539675-30539694 | None:intergenic | 30.0% | |
| !!! | TTTTTTGTTGTCAAAGATCC+TGG | + | chr7_4:30539697-30539716 | Msa1149270:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr7_4:30539768-30539787 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr7_4:30539769-30539788 | None:intergenic | 30.0% |
| CAAGATTAGAACACTATGAA+AGG | + | chr7_4:30539923-30539942 | Msa1149270:intron | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr7_4:30540182-30540201 | Msa1149270:intron | 30.0% | |
| !! | TCTTGCTATTTACTTGATTC+AGG | + | chr7_4:30540515-30540534 | Msa1149270:intron | 30.0% |
| TTCAATGTTTGTGTAAGAGT+AGG | - | chr7_4:30540560-30540579 | None:intergenic | 30.0% | |
| TCTCTTTATGAAACTGAAAG+CGG | - | chr7_4:30540619-30540638 | None:intergenic | 30.0% | |
| GGATGAAGAAAATGAAAGCA+AGG | + | chr7_4:30534749-30534768 | Msa1149270:CDS | 35.0% | |
| AAAATGCGAAGAATGGAATC+AGG | + | chr7_4:30534864-30534883 | Msa1149270:CDS | 35.0% | |
| TTTCTTGATAGAACGGTTAC+AGG | + | chr7_4:30534915-30534934 | Msa1149270:CDS | 35.0% | |
| ! | CAGATTCAAAGGATTTTGCT+GGG | + | chr7_4:30535155-30535174 | Msa1149270:CDS | 35.0% |
| ! | AGATTCAAAGGATTTTGCTG+GGG | + | chr7_4:30535156-30535175 | Msa1149270:CDS | 35.0% |
| CAAGTGTTCTTTGACATGTA+AGG | + | chr7_4:30535295-30535314 | Msa1149270:intron | 35.0% | |
| ! | TACTATTTTCTCCTTCATCC+GGG | + | chr7_4:30535550-30535569 | Msa1149270:intron | 35.0% |
| !!! | ATTTTCAGGTGTGACAAGAA+TGG | + | chr7_4:30535700-30535719 | Msa1149270:intron | 35.0% |
| ACATCTCTTGAAAACAGATG+TGG | + | chr7_4:30536166-30536185 | Msa1149270:intron | 35.0% | |
| GCAGCTTGAAACTCTATTAA+GGG | + | chr7_4:30536188-30536207 | Msa1149270:CDS | 35.0% | |
| ! | TGTGTTCTTGTACCAAGTTT+TGG | - | chr7_4:30536240-30536259 | None:intergenic | 35.0% |
| ATAGGAGTTCTATACTTGCA+CGG | - | chr7_4:30536285-30536304 | None:intergenic | 35.0% | |
| ! | TCTTTGGTTAGCCATAAACT+TGG | + | chr7_4:30536371-30536390 | Msa1149270:CDS | 35.0% |
| TTGGAAGTTTCTCCAATACA+AGG | + | chr7_4:30536404-30536423 | Msa1149270:CDS | 35.0% | |
| AAGAGCAGCATATGAAGTAA+TGG | + | chr7_4:30536428-30536447 | Msa1149270:CDS | 35.0% | |
| AGAGCAGCATATGAAGTAAT+GGG | + | chr7_4:30536429-30536448 | Msa1149270:CDS | 35.0% | |
| ! | ATCATGTCTCTGTTTTGCAA+AGG | + | chr7_4:30536452-30536471 | Msa1149270:CDS | 35.0% |
| ! | TCATGTCTCTGTTTTGCAAA+GGG | + | chr7_4:30536453-30536472 | Msa1149270:CDS | 35.0% |
| CATGTTGAATTTGAGAGTCT+CGG | - | chr7_4:30536484-30536503 | None:intergenic | 35.0% | |
| GTGTTCTTCTACACATTGTA+AGG | - | chr7_4:30536518-30536537 | None:intergenic | 35.0% | |
| AGAACACTTACAAAGTTACG+AGG | + | chr7_4:30536531-30536550 | Msa1149270:CDS | 35.0% | |
| ! | ATTGCAGTTGGTGTAGTTAT+AGG | + | chr7_4:30536609-30536628 | Msa1149270:CDS | 35.0% |
| AAGATACGTGAATTCCTACA+TGG | - | chr7_4:30536644-30536663 | None:intergenic | 35.0% | |
| TTGTCCGACCGAAAAATTTA+TGG | + | chr7_4:30536686-30536705 | Msa1149270:CDS | 35.0% | |
| !! | ATCGCCATAAATTTTTCGGT+CGG | - | chr7_4:30536693-30536712 | None:intergenic | 35.0% |
| AGGCTGCTTATAATCAAAAC+CGG | - | chr7_4:30536724-30536743 | None:intergenic | 35.0% | |
| AAAATTCCAGTTATACCAGG+AGG | - | chr7_4:30536771-30536790 | None:intergenic | 35.0% | |
| ATACCAAAAGGAGTTGAATC+CGG | - | chr7_4:30536886-30536905 | None:intergenic | 35.0% | |
| CAAATGATGAGCATACCAAA+AGG | - | chr7_4:30536898-30536917 | None:intergenic | 35.0% | |
| TGCTCATCATTTGCTTATTC+TGG | + | chr7_4:30536905-30536924 | Msa1149270:CDS | 35.0% | |
| ! | AAAGGATTGGCATAAGAAGA+CGG | + | chr7_4:30536971-30536990 | Msa1149270:CDS | 35.0% |
| CTGAATCTGTACTGAAATCT+AGG | - | chr7_4:30537036-30537055 | None:intergenic | 35.0% | |
| CTTTGATACTTGAATCCTTG+TGG | - | chr7_4:30537315-30537334 | None:intergenic | 35.0% | |
| CAAGGATTCAAGTATCAAAG+TGG | + | chr7_4:30537315-30537334 | Msa1149270:CDS | 35.0% | |
| GTTTAGTTAGCTATGAAGCA+CGG | + | chr7_4:30537622-30537641 | Msa1149270:intron | 35.0% | |
| ATTGGTAGGGATAAAAAGCA+GGG | - | chr7_4:30537910-30537929 | None:intergenic | 35.0% | |
| TTGCTAAGACTTAAACATGC+AGG | + | chr7_4:30538078-30538097 | Msa1149270:intron | 35.0% | |
| ! | CTCTAGTTTCCATCCTTATA+AGG | - | chr7_4:30538138-30538157 | None:intergenic | 35.0% |
| TATCCAAAGATCCTCATCAA+AGG | + | chr7_4:30538273-30538292 | Msa1149270:CDS | 35.0% | |
| !! | TAATGCTTATAGCTTTGTGC+TGG | - | chr7_4:30538312-30538331 | None:intergenic | 35.0% |
| TATGATGTACTCTTGCTCAT+TGG | + | chr7_4:30538330-30538349 | Msa1149270:CDS | 35.0% | |
| TGACCAACACTTTAGATTGA+AGG | + | chr7_4:30538453-30538472 | Msa1149270:intron | 35.0% | |
| GCTTCATTTGAATGGTTCAA+AGG | + | chr7_4:30538913-30538932 | Msa1149270:CDS | 35.0% | |
| TTAACATGTTTCAACGATGC+AGG | + | chr7_4:30539031-30539050 | Msa1149270:intron | 35.0% | |
| TAACATGTTTCAACGATGCA+GGG | + | chr7_4:30539032-30539051 | Msa1149270:intron | 35.0% | |
| CTATTTGACTAGTGTCTATG+AGG | + | chr7_4:30539073-30539092 | Msa1149270:CDS | 35.0% | |
| TTGATGTAGTTTCAGAAAGC+CGG | + | chr7_4:30539159-30539178 | Msa1149270:CDS | 35.0% | |
| !! | AATGTGAATTTCTAGCTACC+AGG | - | chr7_4:30539718-30539737 | None:intergenic | 35.0% |
| AAGTAGGGACTAAACTTACA+AGG | - | chr7_4:30540227-30540246 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr7_4:30540227-30540246 | Msa1149270:intron | 35.0% | |
| GATTTGAATAGGAAGCAATC+TGG | - | chr7_4:30540363-30540382 | None:intergenic | 35.0% | |
| ! | GATTCAGGTGTATTTTACTG+TGG | + | chr7_4:30540530-30540549 | Msa1149270:intron | 35.0% |
| TTAGGCTAAACTCTTGACAA+AGG | - | chr7_4:30540586-30540605 | None:intergenic | 35.0% | |
| CTCTTTATGAAACTGAAAGC+GGG | - | chr7_4:30540618-30540637 | None:intergenic | 35.0% | |
| CATTGAGATCGTTCCTAATG+TGG | + | chr7_4:30534713-30534732 | Msa1149270:CDS | 40.0% | |
| TGGAAGCAAAATGCGAAGAA+TGG | + | chr7_4:30534857-30534876 | Msa1149270:CDS | 40.0% | |
| TTTACGCAACATGCAGTTGA+TGG | + | chr7_4:30534975-30534994 | Msa1149270:CDS | 40.0% | |
| GACAAATTTGGACAATGCGT+TGG | + | chr7_4:30535011-30535030 | Msa1149270:CDS | 40.0% | |
| ! | GCAGATTCAAAGGATTTTGC+TGG | + | chr7_4:30535154-30535173 | Msa1149270:CDS | 40.0% |
| ! | TTTTGCTGGGGAACTATATG+AGG | + | chr7_4:30535168-30535187 | Msa1149270:CDS | 40.0% |
| ! | AACTATATGAGGCACTTGCA+AGG | + | chr7_4:30535179-30535198 | Msa1149270:CDS | 40.0% |
| !!! | TCAAGTTAGGGTTTTTTGGG+AGG | + | chr7_4:30535240-30535259 | Msa1149270:CDS | 40.0% |
| ! | TCGAACATGAGACTTTAAGG+AGG | - | chr7_4:30535434-30535453 | None:intergenic | 40.0% |
| CTAAATTAGCCGAGTCAAAC+TGG | - | chr7_4:30535469-30535488 | None:intergenic | 40.0% | |
| ! | ACTATTTTCTCCTTCATCCG+GGG | + | chr7_4:30535551-30535570 | Msa1149270:intron | 40.0% |
| AGTGCTTCTGCGAATAGATT+GGG | + | chr7_4:30535995-30536014 | Msa1149270:CDS | 40.0% | |
| GAGCTTGATCCAGATCATAA+TGG | + | chr7_4:30536064-30536083 | Msa1149270:CDS | 40.0% | |
| GGCAGCTTGAAACTCTATTA+AGG | + | chr7_4:30536187-30536206 | Msa1149270:CDS | 40.0% | |
| GAAATGGTTAGTGCAGAAGA+TGG | + | chr7_4:30536210-30536229 | Msa1149270:CDS | 40.0% | |
| GAAGATGGCAAACCAAAACT+TGG | + | chr7_4:30536225-30536244 | Msa1149270:CDS | 40.0% | |
| ATGCTGCTCTTTCCTTGTAT+TGG | - | chr7_4:30536419-30536438 | None:intergenic | 40.0% | |
| CGAGACTCTCAAATTCAACA+TGG | + | chr7_4:30536482-30536501 | Msa1149270:CDS | 40.0% | |
| GTCGGACAAGAAACTATTCT+TGG | - | chr7_4:30536675-30536694 | None:intergenic | 40.0% | |
| TTTATGGCGATACTTGGATC+CGG | + | chr7_4:30536702-30536721 | Msa1149270:CDS | 40.0% | |
| GTAACAAGGGTCAAGTAACT+AGG | - | chr7_4:30536744-30536763 | None:intergenic | 40.0% | |
| ATACCTTAATGACGTTCACG+CGG | - | chr7_4:30537162-30537181 | None:intergenic | 40.0% | |
| TTCTAGCACTATACATGACC+AGG | + | chr7_4:30537289-30537308 | Msa1149270:CDS | 40.0% | |
| ACACTCAAGTAATCATCTCC+AGG | - | chr7_4:30537509-30537528 | None:intergenic | 40.0% | |
| TTCTGTAGTCCAATCTCCTA+AGG | - | chr7_4:30537543-30537562 | None:intergenic | 40.0% | |
| !! | GTAATTACAAGTGTCGGTGT+CGG | + | chr7_4:30537724-30537743 | Msa1149270:intron | 40.0% |
| GACTAACTGACTATGAAGCA+CGG | - | chr7_4:30537796-30537815 | None:intergenic | 40.0% | |
| GCTTCATAGTCAGTTAGTCA+AGG | + | chr7_4:30537797-30537816 | Msa1149270:intron | 40.0% | |
| CATTGGTAGGGATAAAAAGC+AGG | - | chr7_4:30537911-30537930 | None:intergenic | 40.0% | |
| !! | ACGGACTAAAAGCATTGGTA+GGG | - | chr7_4:30537923-30537942 | None:intergenic | 40.0% |
| !! | TACGGACTAAAAGCATTGGT+AGG | - | chr7_4:30537924-30537943 | None:intergenic | 40.0% |
| ! | TCTGTACGGACTAAAAGCAT+TGG | - | chr7_4:30537928-30537947 | None:intergenic | 40.0% |
| ! | AATGCTTTTAGTCCGTACAG+AGG | + | chr7_4:30537927-30537946 | Msa1149270:intron | 40.0% |
| ACGTTTCTTAGTCCTCTGTA+CGG | - | chr7_4:30537942-30537961 | None:intergenic | 40.0% | |
| ! | CCAAGAGTTGTTATTCACCT+TGG | - | chr7_4:30538193-30538212 | None:intergenic | 40.0% |
| CCAAGGTGAATAACAACTCT+TGG | + | chr7_4:30538190-30538209 | Msa1149270:intron | 40.0% | |
| ! | TTGCTCATTGGTCTAGGAAT+TGG | + | chr7_4:30538342-30538361 | Msa1149270:CDS | 40.0% |
| ! | TGCTCATTGGTCTAGGAATT+GGG | + | chr7_4:30538343-30538362 | Msa1149270:CDS | 40.0% |
| ! | AGGCCTTCAATCTAAAGTGT+TGG | - | chr7_4:30538459-30538478 | None:intergenic | 40.0% |
| CTTTAGATTGAAGGCCTGTA+TGG | + | chr7_4:30538462-30538481 | Msa1149270:intron | 40.0% | |
| CAACACTGACATATAGACAC+CGG | - | chr7_4:30538546-30538565 | None:intergenic | 40.0% | |
| GGTGTCTATATGTCAGTGTT+GGG | + | chr7_4:30538545-30538564 | Msa1149270:intron | 40.0% | |
| ATAACAGGAAAGGTCTGAGA+GGG | + | chr7_4:30538810-30538829 | Msa1149270:intron | 40.0% | |
| ! | AGGACCTTTTCTATCTTCGT+CGG | - | chr7_4:30538857-30538876 | None:intergenic | 40.0% |
| !! | TGAATGGTTCAAAGGTGTCA+TGG | + | chr7_4:30538921-30538940 | Msa1149270:CDS | 40.0% |
| TTGACTAGTGTCTATGAGGA+AGG | + | chr7_4:30539077-30539096 | Msa1149270:CDS | 40.0% | |
| CACTTATTGCCATGATTCAG+AGG | + | chr7_4:30539114-30539133 | Msa1149270:CDS | 40.0% | |
| AGGCTGCAACATGCTAAAAA+TGG | + | chr7_4:30539134-30539153 | Msa1149270:CDS | 40.0% | |
| TGATGTAGTTTCAGAAAGCC+GGG | + | chr7_4:30539160-30539179 | Msa1149270:CDS | 40.0% | |
| ! | CACATTTTGCAAGACCAAAC+TGG | + | chr7_4:30539283-30539302 | Msa1149270:CDS | 40.0% |
| TGCAAGACCAAACTGGAAAA+AGG | + | chr7_4:30539290-30539309 | Msa1149270:CDS | 40.0% | |
| ! | GAGAAGACCTTTTTCCAGTT+TGG | - | chr7_4:30539300-30539319 | None:intergenic | 40.0% |
| ACACACGAAAGTTCTCGAAT+AGG | + | chr7_4:30539333-30539352 | Msa1149270:CDS | 40.0% | |
| ! | GATTTTCAGCATAACAACGG+TGG | - | chr7_4:30539534-30539553 | None:intergenic | 40.0% |
| GACAATGCACGATATATGCA+GGG | - | chr7_4:30540336-30540355 | None:intergenic | 40.0% | |
| GAATAGGAAGCAATCTGGTA+GGG | - | chr7_4:30540358-30540377 | None:intergenic | 40.0% | |
| TGAATAGGAAGCAATCTGGT+AGG | - | chr7_4:30540359-30540378 | None:intergenic | 40.0% | |
| CAAGAGGGCTTAAGGGTTTA+CGG | + | chr7_4:30534892-30534911 | Msa1149270:CDS | 45.0% | |
| CAGGTAAAGAAGCTGATGCA+TGG | + | chr7_4:30534934-30534953 | Msa1149270:CDS | 45.0% | |
| AGGTATGGGAGCAGATTCAA+AGG | + | chr7_4:30535144-30535163 | Msa1149270:intron | 45.0% | |
| TTAGATAGGCAAAACCCGCT+TGG | + | chr7_4:30535368-30535387 | Msa1149270:intron | 45.0% | |
| TAGATAGGCAAAACCCGCTT+GGG | + | chr7_4:30535369-30535388 | Msa1149270:intron | 45.0% | |
| GTCTCATGTTCGATTATCCC+CGG | + | chr7_4:30535441-30535460 | Msa1149270:intron | 45.0% | |
| GCTCAACTAGTTCGAGCTAA+AGG | - | chr7_4:30535614-30535633 | None:intergenic | 45.0% | |
| AGGTGTGACAAGAATGGAGA+TGG | + | chr7_4:30535706-30535725 | Msa1149270:intron | 45.0% | |
| GTGACAAGAATGGAGATGGT+AGG | + | chr7_4:30535710-30535729 | Msa1149270:CDS | 45.0% | |
| AGATGGTAGGTTATCCGAAG+AGG | + | chr7_4:30535723-30535742 | Msa1149270:CDS | 45.0% | |
| !! | TATGAAGCACTGCCCCTAAA+CGG | + | chr7_4:30535804-30535823 | Msa1149270:intron | 45.0% |
| !! | CACGACACTGACTCAAACAT+CGG | + | chr7_4:30535828-30535847 | Msa1149270:intron | 45.0% |
| TGCAAGTGTCAATGTCGTGT+TGG | + | chr7_4:30535886-30535905 | Msa1149270:intron | 45.0% | |
| ! | GTGTTGGTATTGTCGAGTGT+TGG | + | chr7_4:30535902-30535921 | Msa1149270:intron | 45.0% |
| GAGTGCTTCTGCGAATAGAT+TGG | + | chr7_4:30535994-30536013 | Msa1149270:CDS | 45.0% | |
| ACCAGGAGGACTTGTAACAA+GGG | - | chr7_4:30536757-30536776 | None:intergenic | 45.0% | |
| TACCAGGAGGACTTGTAACA+AGG | - | chr7_4:30536758-30536777 | None:intergenic | 45.0% | |
| ACAAGTCCTCCTGGTATAAC+TGG | + | chr7_4:30536762-30536781 | Msa1149270:CDS | 45.0% | |
| AATCCGGCCAAATGATGCAA+CGG | - | chr7_4:30536870-30536889 | None:intergenic | 45.0% | |
| ! | AGAGCACTAGTGGAACTACA+AGG | - | chr7_4:30537096-30537115 | None:intergenic | 45.0% |
| GTAGTTCCACTAGTGCTCTA+TGG | + | chr7_4:30537097-30537116 | Msa1149270:CDS | 45.0% | |
| ! | TCAGTACCATAGAGCACTAG+TGG | - | chr7_4:30537106-30537125 | None:intergenic | 45.0% |
| ATACTTGAATCCTTGTGGCC+TGG | - | chr7_4:30537310-30537329 | None:intergenic | 45.0% | |
| AAAGCAGGGACCAAAAATCG+TGG | - | chr7_4:30537896-30537915 | None:intergenic | 45.0% | |
| AACCTCAAAGTGCAATCCCA+AGG | + | chr7_4:30538107-30538126 | Msa1149270:CDS | 45.0% | |
| ACCTCAAAGTGCAATCCCAA+GGG | + | chr7_4:30538108-30538127 | Msa1149270:CDS | 45.0% | |
| TCCTTATAAGGCTTCCCCTT+GGG | - | chr7_4:30538126-30538145 | None:intergenic | 45.0% | |
| ATCCTTATAAGGCTTCCCCT+TGG | - | chr7_4:30538127-30538146 | None:intergenic | 45.0% | |
| ! | AAGGGGAAGCCTTATAAGGA+TGG | + | chr7_4:30538126-30538145 | Msa1149270:CDS | 45.0% |
| GGTCCTTTGATGAGGATCTT+TGG | - | chr7_4:30538279-30538298 | None:intergenic | 45.0% | |
| ATCCTCATCAAAGGACCCTA+TGG | + | chr7_4:30538282-30538301 | Msa1149270:CDS | 45.0% | |
| ! | GTACTCTTGCTCATTGGTCT+AGG | + | chr7_4:30538336-30538355 | Msa1149270:CDS | 45.0% |
| ! | GCTCATTGGTCTAGGAATTG+GGG | + | chr7_4:30538344-30538363 | Msa1149270:CDS | 45.0% |
| GAGGACTTGCCATCTTCATT+TGG | - | chr7_4:30538407-30538426 | None:intergenic | 45.0% | |
| ! | TCGTTGTCACTTACGTGTTG+AGG | - | chr7_4:30538426-30538445 | None:intergenic | 45.0% |
| TAGATTGAAGGCCTGTATGG+CGG | + | chr7_4:30538465-30538484 | Msa1149270:intron | 45.0% | |
| CGGCACGATACTAACATATG+CGG | + | chr7_4:30538485-30538504 | Msa1149270:intron | 45.0% | |
| CGGTGTCTATATGTCAGTGT+TGG | + | chr7_4:30538544-30538563 | Msa1149270:intron | 45.0% | |
| CATAACAGGAAAGGTCTGAG+AGG | + | chr7_4:30538809-30538828 | Msa1149270:intron | 45.0% | |
| AGCTCCGACGAAGATAGAAA+AGG | + | chr7_4:30538850-30538869 | Msa1149270:CDS | 45.0% | |
| GGGAGCAAGCTTCATTTGAA+TGG | + | chr7_4:30538905-30538924 | Msa1149270:CDS | 45.0% | |
| ATGTTGCAGCCTCTGAATCA+TGG | - | chr7_4:30539126-30539145 | None:intergenic | 45.0% | |
| GGACGATGCAGTTGAAATTG+TGG | + | chr7_4:30539574-30539593 | Msa1149270:intron | 45.0% | |
| TTGTGGTTGCGATGCCATTA+CGG | + | chr7_4:30539591-30539610 | Msa1149270:intron | 45.0% | |
| !!! | GGATTTTGAGGTGTCCGTAA+TGG | - | chr7_4:30539608-30539627 | None:intergenic | 45.0% |
| ! | AGGTGAATAAGTGAGGTGTC+TGG | + | chr7_4:30540295-30540314 | Msa1149270:intron | 45.0% |
| ! | GGTGAATAAGTGAGGTGTCT+GGG | + | chr7_4:30540296-30540315 | Msa1149270:intron | 45.0% |
| CACGATATATGCAGGGTTCA+GGG | - | chr7_4:30540329-30540348 | None:intergenic | 45.0% | |
| GGACAATGCACGATATATGC+AGG | - | chr7_4:30540337-30540356 | None:intergenic | 45.0% | |
| GAAAGCGGGTAGATGTGTTT+AGG | - | chr7_4:30540604-30540623 | None:intergenic | 45.0% | |
| !! | AATAATATTAATATCAATAA+TGG | + | chr7_4:30534837-30534856 | Msa1149270:CDS | 5.0% |
| !!! | ATAAGTAAATTTTTTTTATA+GGG | - | chr7_4:30539828-30539847 | None:intergenic | 5.0% |
| !!! | TATAAGTAAATTTTTTTTAT+AGG | - | chr7_4:30539829-30539848 | None:intergenic | 5.0% |
| ! | ATGGAATCAGGTGCTGCAAG+AGG | + | chr7_4:30534876-30534895 | Msa1149270:CDS | 50.0% |
| ! | TGGAATCAGGTGCTGCAAGA+GGG | + | chr7_4:30534877-30534896 | Msa1149270:CDS | 50.0% |
| !! | TTGGCCTGGTGGTATTGACT+TGG | + | chr7_4:30535392-30535411 | Msa1149270:intron | 50.0% |
| !! | TGGCCTGGTGGTATTGACTT+GGG | + | chr7_4:30535393-30535412 | Msa1149270:intron | 50.0% |
| !! | GTGGTATTGACTTGGGACCT+GGG | + | chr7_4:30535400-30535419 | Msa1149270:intron | 50.0% |
| !! | TATTGACTTGGGACCTGGGA+GGG | + | chr7_4:30535404-30535423 | Msa1149270:intron | 50.0% |
| TGGTAGGTTATCCGAAGAGG+AGG | + | chr7_4:30535726-30535745 | Msa1149270:CDS | 50.0% | |
| GTTATCCGAAGAGGAGGTGA+AGG | + | chr7_4:30535732-30535751 | Msa1149270:CDS | 50.0% | |
| GTTTAGGGGCAGTGCTTCAT+AGG | - | chr7_4:30535805-30535824 | None:intergenic | 50.0% | |
| TCAGTGTCGTGTCCGTTTAG+GGG | - | chr7_4:30535819-30535838 | None:intergenic | 50.0% | |
| GTCAGTGTCGTGTCCGTTTA+GGG | - | chr7_4:30535820-30535839 | None:intergenic | 50.0% | |
| AGTCAGTGTCGTGTCCGTTT+AGG | - | chr7_4:30535821-30535840 | None:intergenic | 50.0% | |
| ACCCTTGTTACAAGTCCTCC+TGG | + | chr7_4:30536753-30536772 | Msa1149270:CDS | 50.0% | |
| ACCTTCGCCGTTGCATCATT+TGG | + | chr7_4:30536860-30536879 | Msa1149270:CDS | 50.0% | |
| ! | TGGCCGGATTCAACTCCTTT+TGG | + | chr7_4:30536880-30536899 | Msa1149270:CDS | 50.0% |
| TCACCGCGTGAACGTCATTA+AGG | + | chr7_4:30537156-30537175 | Msa1149270:CDS | 50.0% | |
| CTATACATGACCAGGCCACA+AGG | + | chr7_4:30537297-30537316 | Msa1149270:CDS | 50.0% | |
| ! | GGTGCAGATGTGATGGAGAA+AGG | - | chr7_4:30537488-30537507 | None:intergenic | 50.0% |
| TTCTCCATCACATCTGCACC+TGG | + | chr7_4:30537488-30537507 | Msa1149270:CDS | 50.0% | |
| ATCTCCAGGTGCAGATGTGA+TGG | - | chr7_4:30537495-30537514 | None:intergenic | 50.0% | |
| TGTCGATGTGTTAGTGTCCG+TGG | - | chr7_4:30537670-30537689 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr7_4:30537785-30537804 | None:intergenic | 50.0% | |
| CCTCAAAGTGCAATCCCAAG+GGG | + | chr7_4:30538109-30538128 | Msa1149270:CDS | 50.0% | |
| ! | TCCCAAGGGGAAGCCTTATA+AGG | + | chr7_4:30538122-30538141 | Msa1149270:CDS | 50.0% |
| CTCCATAGGGTCCTTTGATG+AGG | - | chr7_4:30538287-30538306 | None:intergenic | 50.0% | |
| ! | CTTTGTGCTGGTGCTCCATA+GGG | - | chr7_4:30538300-30538319 | None:intergenic | 50.0% |
| TTAGTATCGTGCCGCCATAC+AGG | - | chr7_4:30538479-30538498 | None:intergenic | 50.0% | |
| GTCGGAGCTATTGCTACTGA+AGG | - | chr7_4:30538839-30538858 | None:intergenic | 50.0% | |
| GCACGATATATGCAGGGTTC+AGG | - | chr7_4:30540330-30540349 | None:intergenic | 50.0% | |
| ! | AGGTGCTGCAAGAGGGCTTA+AGG | + | chr7_4:30534884-30534903 | Msa1149270:CDS | 55.0% |
| ! | GGTGCTGCAAGAGGGCTTAA+GGG | + | chr7_4:30534885-30534904 | Msa1149270:CDS | 55.0% |
| TAGGCAAAACCCGCTTGGGT+TGG | + | chr7_4:30535373-30535392 | Msa1149270:intron | 55.0% | |
| GGTCCCAAGTCAATACCACC+AGG | - | chr7_4:30535399-30535418 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGACTTGGGACC+TGG | + | chr7_4:30535399-30535418 | Msa1149270:intron | 55.0% |
| !! | GTATTGACTTGGGACCTGGG+AGG | + | chr7_4:30535403-30535422 | Msa1149270:intron | 55.0% |
| TAGCCGAGTCAAACTGGCAC+CGG | - | chr7_4:30535463-30535482 | None:intergenic | 55.0% | |
| ! | AAAGGCACAGAGCTCAACCC+CGG | - | chr7_4:30535571-30535590 | None:intergenic | 55.0% |
| ATCCGAAGAGGAGGTGAAGG+AGG | + | chr7_4:30535735-30535754 | Msa1149270:CDS | 55.0% | |
| CACCTCCTTCACCTCCTCTT+CGG | - | chr7_4:30535740-30535759 | None:intergenic | 55.0% | |
| GCCAAATGATGCAACGGCGA+AGG | - | chr7_4:30536864-30536883 | None:intergenic | 55.0% | |
| TCGCCGTTGCATCATTTGGC+CGG | + | chr7_4:30536864-30536883 | Msa1149270:CDS | 55.0% | |
| ACGGACACGAACACGAACAC+CGG | + | chr7_4:30537641-30537660 | Msa1149270:intron | 55.0% | |
| AACACGAACACCGGACACCA+CGG | + | chr7_4:30537650-30537669 | Msa1149270:intron | 55.0% | |
| GTGTTAGTGTCCGTGGTGTC+CGG | - | chr7_4:30537663-30537682 | None:intergenic | 55.0% | |
| GATTAGGCGTGTCCTGGTGT+CGG | - | chr7_4:30537763-30537782 | None:intergenic | 55.0% | |
| CCCCTTGGGATTGCACTTTG+AGG | - | chr7_4:30538112-30538131 | None:intergenic | 55.0% | |
| ! | GCTTTGTGCTGGTGCTCCAT+AGG | - | chr7_4:30538301-30538320 | None:intergenic | 55.0% |
| !! | AAAACCCGCTTGGGTTGGCC+TGG | + | chr7_4:30535378-30535397 | Msa1149270:intron | 60.0% |
| TACCACCAGGCCAACCCAAG+CGG | - | chr7_4:30535386-30535405 | None:intergenic | 60.0% | |
| !! | TTAAGGAGGAGCACCCTCCC+AGG | - | chr7_4:30535420-30535439 | None:intergenic | 60.0% |
| ! | TCCCCGGTGCCAGTTTGACT+CGG | + | chr7_4:30535457-30535476 | Msa1149270:intron | 60.0% |
| AGCCGAGTCAAACTGGCACC+GGG | - | chr7_4:30535462-30535481 | None:intergenic | 60.0% | |
| CAGAGCTCAACCCCGGATGA+AGG | - | chr7_4:30535564-30535583 | None:intergenic | 60.0% | |
| CACGACACATGTCCGACACC+AGG | + | chr7_4:30537748-30537767 | Msa1149270:intron | 60.0% | |
| ACCAGGACACGCCTAATCCG+AGG | + | chr7_4:30537765-30537784 | Msa1149270:intron | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+TGG | - | chr7_4:30537769-30537788 | None:intergenic | 60.0% |
| GCACGGACACTCCTCGGATT+AGG | - | chr7_4:30537779-30537798 | None:intergenic | 60.0% | |
| ACCACCAGGCCAACCCAAGC+GGG | - | chr7_4:30535385-30535404 | None:intergenic | 65.0% | |
| GCCGAGTCAAACTGGCACCG+GGG | - | chr7_4:30535461-30535480 | None:intergenic | 65.0% | |
| !! | ACCCGCTTGGGTTGGCCTGG+TGG | + | chr7_4:30535381-30535400 | Msa1149270:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 30534660 | 30540646 | 30534660 | ID=Msa1149270;Name=Msa1149270 |
| chr7_4 | mRNA | 30534660 | 30540646 | 30534660 | ID=Msa1149270-mRNA-1;Parent=Msa1149270;Name=Msa1149270-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|14|0|852 |
| chr7_4 | exon | 30534660 | 30535032 | 30534660 | ID=Msa1149270-mRNA-1:exon:7408;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30535146 | 30535311 | 30535146 | ID=Msa1149270-mRNA-1:exon:7409;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30535708 | 30535756 | 30535708 | ID=Msa1149270-mRNA-1:exon:7410;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30535983 | 30536096 | 30535983 | ID=Msa1149270-mRNA-1:exon:7411;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30536183 | 30536992 | 30536183 | ID=Msa1149270-mRNA-1:exon:7412;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30537082 | 30537177 | 30537082 | ID=Msa1149270-mRNA-1:exon:7413;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30537267 | 30537382 | 30537267 | ID=Msa1149270-mRNA-1:exon:7414;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30537481 | 30537583 | 30537481 | ID=Msa1149270-mRNA-1:exon:7415;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30538100 | 30538194 | 30538100 | ID=Msa1149270-mRNA-1:exon:7416;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30538266 | 30538431 | 30538266 | ID=Msa1149270-mRNA-1:exon:7417;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30538817 | 30538969 | 30538817 | ID=Msa1149270-mRNA-1:exon:7418;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30539053 | 30539181 | 30539053 | ID=Msa1149270-mRNA-1:exon:7419;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30539276 | 30539354 | 30539276 | ID=Msa1149270-mRNA-1:exon:7420;Parent=Msa1149270-mRNA-1 |
| chr7_4 | exon | 30540537 | 30540646 | 30540537 | ID=Msa1149270-mRNA-1:exon:7421;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30534660 | 30535032 | 30534660 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30535146 | 30535311 | 30535146 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30535708 | 30535756 | 30535708 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30535983 | 30536096 | 30535983 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30536183 | 30536992 | 30536183 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30537082 | 30537177 | 30537082 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30537267 | 30537382 | 30537267 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30537481 | 30537583 | 30537481 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30538100 | 30538194 | 30538100 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30538266 | 30538431 | 30538266 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30538817 | 30538969 | 30538817 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30539053 | 30539181 | 30539053 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30539276 | 30539354 | 30539276 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| chr7_4 | CDS | 30540537 | 30540646 | 30540537 | ID=Msa1149270-mRNA-1:cds;Parent=Msa1149270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
