AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1027470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027470 MtrunA17_Chr7g0246371 98.505 669 8 2 1 669 1 667 0.0 1363
Msa1027470 MtrunA17_Chr8g0351091 82.810 605 102 1 64 666 8 612 0.0 1060
Msa1027470 MtrunA17_Chr3g0138381 59.638 607 229 4 74 664 57 663 0.0 736
Msa1027470 MtrunA17_Chr2g0290961 59.961 512 200 3 154 665 160 666 0.0 655
Msa1027470 MtrunA17_Chr8g0383241 58.547 468 189 1 199 666 29 491 0.0 597
Msa1027470 MtrunA17_Chr2g0283461 48.069 466 233 5 205 664 70 532 3.26e-162 476
Msa1027470 MtrunA17_Chr7g0235161 57.421 411 169 4 259 665 151 559 3.26e-158 467
Msa1027470 MtrunA17_Chr4g0061711 46.667 495 245 7 180 665 51 535 7.87e-158 465
Msa1027470 MtrunA17_Chr2g0308241 47.312 465 237 5 205 664 73 534 1.65e-156 462
Msa1027470 MtrunA17_Chr7g0260711 47.186 462 216 3 206 664 216 652 3.38e-153 457
Msa1027470 MtrunA17_Chr6g0456071 48.408 471 223 8 214 665 85 554 2.45e-147 439
Msa1027470 MtrunA17_Chr1g0184751 43.710 469 232 7 201 664 156 597 1.41e-134 408
Msa1027470 MtrunA17_Chr2g0277591 42.918 466 233 6 205 664 70 508 4.99e-134 403
Msa1027470 MtrunA17_Chr7g0218571 43.365 422 210 7 269 666 121 537 8.34e-121 370
Msa1027470 MtrunA17_Chr2g0319311 41.346 416 225 5 268 664 124 539 3.96e-114 353
Msa1027470 MtrunA17_Chr6g0454101 44.365 417 213 5 269 666 116 532 3.38e-112 348
Msa1027470 MtrunA17_Chr4g0076011 40.201 398 210 5 295 664 74 471 8.71e-102 319
Msa1027470 MtrunA17_Chr3g0097091 38.462 442 236 11 245 664 101 528 5.71e-95 303
Msa1027470 MtrunA17_Chr7g0245621 34.440 482 286 6 192 664 183 643 3.34e-83 275
Msa1027470 MtrunA17_Chr4g0076331 57.286 199 55 3 469 664 1 172 2.38e-67 218
Msa1027470 MtrunA17_Chr6g0451981 24.776 335 201 12 343 656 64 368 6.09e-21 95.1
Msa1027470 MtrunA17_Chr7g0269751 29.231 195 130 4 470 656 159 353 8.10e-20 91.7
Msa1027470 MtrunA17_Chr7g0259321 29.714 175 118 3 470 639 151 325 1.09e-19 91.3
Msa1027470 MtrunA17_Chr4g0066331 26.482 253 151 7 421 639 69 320 1.13e-19 91.3
Msa1027470 MtrunA17_Chr3g0127611 29.648 199 124 5 470 656 140 334 2.39e-19 90.1
Msa1027470 MtrunA17_Chr3g0141321 26.768 198 136 5 470 658 139 336 1.30e-17 84.7
Msa1027470 MtrunA17_Chr5g0414981 24.242 330 203 12 340 654 76 373 3.72e-17 84.7
Msa1027470 MtrunA17_Chr8g0373671 27.461 193 129 5 470 651 142 334 7.33e-17 82.8
Msa1027470 MtrunA17_Chr1g0154521 28.141 199 133 5 470 658 165 363 9.61e-17 82.4
Msa1027470 MtrunA17_Chr5g0403501 27.778 198 134 5 470 658 166 363 4.62e-15 77.4
Msa1027470 MtrunA17_Chr1g0196511 29.143 175 119 3 470 639 154 328 6.16e-14 73.9
Msa1027470 MtrunA17_Chr4g0076341 41.463 82 43 1 207 288 16 92 5.01e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027470 AT3G61130.1 73.756 663 166 5 7 666 16 673 0.0 1023
Msa1027470 AT4G38270.2 63.208 530 189 2 143 666 147 676 0.0 726
Msa1027470 AT4G38270.1 63.208 530 189 2 143 666 151 680 0.0 725
Msa1027470 AT2G46480.4 60.377 530 203 4 140 666 28 553 0.0 672
Msa1027470 AT2G46480.3 60.377 530 203 4 140 666 15 540 0.0 672
Msa1027470 AT5G47780.1 64.270 459 162 1 207 665 159 615 0.0 650
Msa1027470 AT2G46480.2 56.981 530 196 5 140 666 15 515 0.0 617
Msa1027470 AT2G46480.1 56.981 530 196 5 140 666 28 528 0.0 616
Msa1027470 AT3G25140.1 55.658 433 179 6 244 665 128 558 4.78e-168 493
Msa1027470 AT1G18580.1 48.614 469 229 4 202 662 70 534 1.10e-163 481
Msa1027470 AT2G20810.1 47.957 465 231 7 208 664 74 535 1.64e-151 449
Msa1027470 AT3G02350.1 52.174 437 201 5 236 665 125 560 1.63e-149 445
Msa1027470 AT2G30575.1 44.397 464 231 3 206 666 171 610 1.77e-143 431
Msa1027470 AT1G06780.1 44.372 462 231 2 206 664 149 587 4.50e-140 422
Msa1027470 AT1G06780.2 44.372 462 231 2 206 664 162 600 9.57e-140 422
Msa1027470 AT3G01040.2 45.215 418 210 5 268 666 115 532 7.15e-119 365
Msa1027470 AT3G01040.3 45.215 418 210 5 268 666 115 532 7.15e-119 365
Msa1027470 AT5G15470.1 45.564 417 208 5 269 666 116 532 8.97e-118 362
Msa1027470 AT5G54690.1 38.753 449 244 7 235 664 96 532 1.85e-110 343
Msa1027470 AT3G01040.1 42.344 418 189 6 268 666 115 499 3.46e-103 323
Msa1027470 AT2G38650.2 36.402 478 277 7 192 664 162 617 2.02e-98 315
Msa1027470 AT2G38650.1 36.402 478 277 7 192 664 162 617 2.02e-98 315
Msa1027470 AT3G58790.1 36.580 462 256 11 233 664 84 538 8.65e-89 287
Msa1027470 AT3G58790.2 38.119 404 224 7 283 664 7 406 4.06e-88 281
Msa1027470 AT2G38650.3 37.143 385 216 6 192 572 162 524 4.60e-76 253
Msa1027470 AT3G06260.1 30.857 175 116 3 470 639 150 324 3.91e-21 95.9
Msa1027470 AT4G02130.3 28.205 195 132 4 470 656 150 344 2.11e-20 93.6
Msa1027470 AT4G02130.1 28.205 195 132 4 470 656 150 344 2.11e-20 93.6
Msa1027470 AT4G02130.2 28.205 195 132 4 470 656 150 344 2.11e-20 93.6
Msa1027470 AT1G70090.1 28.571 196 131 5 470 656 169 364 5.02e-19 90.1
Msa1027470 AT1G70090.2 28.571 196 131 5 470 656 169 364 5.02e-19 90.1
Msa1027470 AT3G62660.1 27.179 195 134 4 470 656 164 358 8.33e-19 89.0
Msa1027470 AT1G02720.1 28.718 195 131 4 470 656 165 359 1.27e-18 88.6
Msa1027470 AT1G02720.2 28.718 195 131 4 470 656 165 359 1.27e-18 88.6
Msa1027470 AT3G28340.1 28.351 194 129 6 468 651 153 346 1.92e-18 88.2
Msa1027470 AT1G19300.1 27.778 198 134 5 470 658 150 347 2.21e-17 84.7
Msa1027470 AT1G24170.1 23.913 322 192 10 353 656 81 367 1.81e-16 82.4
Msa1027470 AT3G50760.1 26.396 197 136 4 468 655 134 330 6.20e-15 77.0
Msa1027470 AT1G13250.1 25.424 295 180 9 353 639 56 318 7.62e-13 70.9

Find 187 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTACTGATAAACTCAATTT+TGG 0.156608 7_1:-59885004 Msa1027470:CDS
CAGCTTGTGCTTACCTCTTT+TGG 0.165480 7_1:+59886832 None:intergenic
TCTTGTCTAAGATGTGTTTC+TGG 0.168293 7_1:+59886500 None:intergenic
AGAAGAGAGAAAGGGGTTTA+TGG 0.181693 7_1:+59888786 None:intergenic
GTTCCCTATGACTGAGAATT+TGG 0.196098 7_1:-59885337 Msa1027470:CDS
TCCACAAGTTTATCCGAAAT+TGG 0.201752 7_1:-59884744 Msa1027470:CDS
GAAATAATCTTTCTGCTTCT+TGG 0.205764 7_1:-59886668 Msa1027470:CDS
TCAGAAGTAGCTTTCTTATA+TGG 0.228459 7_1:-59883491 Msa1027470:three_prime_UTR
GACAGGGTACTATGGAAATT+AGG 0.250416 7_1:-59884122 Msa1027470:CDS
TAAGCCGTGTTTGCAGTTCT+TGG 0.267033 7_1:+59885736 None:intergenic
TTGAGATTGCCAGGTTAAAA+AGG 0.272840 7_1:+59883777 None:intergenic
TATGACTGCAAGTTGGTTAT+TGG 0.275774 7_1:-59885525 Msa1027470:CDS
ATATCACAGGTGGCAGAATT+TGG 0.278377 7_1:-59884471 Msa1027470:intron
AGAAGGATTTGACTGGATTA+TGG 0.290586 7_1:-59884685 Msa1027470:CDS
ACCCTTCTGGCTAGCCTTAC+GGG 0.301649 7_1:+59886342 None:intergenic
AAAAGAATCTTATCCAATTT+CGG 0.301889 7_1:+59884731 None:intergenic
TCCCTTCACACTTCTTCTTC+CGG 0.303746 7_1:-59888632 Msa1027470:intron
AAAGAGAGTCAGCGTGCTTT+AGG 0.304821 7_1:-59885714 Msa1027470:CDS
ATGGTTATACTTGACATATT+TGG 0.307908 7_1:+59883908 None:intergenic
CTGCTTCTTGGAGAGTTGTT+GGG 0.314790 7_1:-59886656 Msa1027470:CDS
GAGAAGGAAGGAAGATCTTC+AGG 0.324973 7_1:-59886467 Msa1027470:intron
CCAGGGCTAATGACATTCTA+TGG 0.326202 7_1:-59884089 Msa1027470:CDS
TCAGTTGATTCAGCAGTTCT+AGG 0.328896 7_1:-59885891 Msa1027470:CDS
TCTGCTTCTTGGAGAGTTGT+TGG 0.331359 7_1:-59886657 Msa1027470:CDS
CACCCTTCTGGCTAGCCTTA+CGG 0.339727 7_1:+59886341 None:intergenic
CCTATTCTCAGACAATGTTT+TGG 0.343893 7_1:-59885289 Msa1027470:CDS
TGACAAAGTATCGTCCTTAC+TGG 0.346721 7_1:-59883932 Msa1027470:CDS
CAAAACATTGTCTGAGAATA+GGG 0.349585 7_1:+59885290 None:intergenic
AATGGGCCAAGTTCTTTCTA+AGG 0.354321 7_1:-59885562 Msa1027470:CDS
TCATGGCATGTACTCGGTTT+GGG 0.356589 7_1:-59884044 Msa1027470:CDS
ATCATGGCATGTACTCGGTT+TGG 0.363039 7_1:-59884045 Msa1027470:CDS
TGCCTTCTGTTCTCTCCATT+TGG 0.363246 7_1:+59886879 None:intergenic
TATGTCCAGCACGAATGATA+TGG 0.364399 7_1:-59886715 Msa1027470:CDS
AAGAAGCAGAAAGATTATTT+CGG 0.364907 7_1:+59886670 None:intergenic
AGTATAACCATCCTTATCTT+AGG 0.371790 7_1:-59883896 Msa1027470:CDS
CTTGTCTAAGATGTGTTTCT+GGG 0.373678 7_1:+59886501 None:intergenic
TTAACCAAATTCTCAGTCAT+AGG 0.376964 7_1:+59885333 None:intergenic
CCAAAACATTGTCTGAGAAT+AGG 0.379751 7_1:+59885289 None:intergenic
TGTTCTTTGTACTTAGGAAT+TGG 0.386136 7_1:+59883841 None:intergenic
TTCTAGGTAAATACAACCTT+TGG 0.386455 7_1:-59885875 Msa1027470:CDS
CTTTCGCCTTAGAAAGAACT+TGG 0.387580 7_1:+59885556 None:intergenic
AGAAGAGAGAGAAGAGAGAA+AGG 0.391404 7_1:+59888777 None:intergenic
GAGAGATAGAAGATTTAGAT+TGG 0.391467 7_1:-59888892 None:intergenic
TGGGAGGAGGTAGTAATCTA+TGG 0.391808 7_1:+59885374 None:intergenic
AGTTGGTTATTGGGAAAGTA+AGG 0.391814 7_1:-59885515 Msa1027470:CDS
ATGACTGCAAGTTGGTTATT+GGG 0.393638 7_1:-59885524 Msa1027470:CDS
TGCACTTTCTGCGTTAATCA+TGG 0.393824 7_1:-59888834 Msa1027470:five_prime_UTR
AAAGAGTGTTCTTTGTACTT+AGG 0.396075 7_1:+59883835 None:intergenic
AAGAATGATGCTCACCCTTC+TGG 0.396798 7_1:+59886329 None:intergenic
ACAGGGTACTATGGAAATTA+GGG 0.397082 7_1:-59884121 Msa1027470:CDS
AATGAACATGTTTGATTTGA+AGG 0.399962 7_1:-59884522 Msa1027470:CDS
GTCATTGCTATCTCTAACCA+TGG 0.402027 7_1:+59883951 None:intergenic
ACTGCTGATGAGCAGGTTAG+AGG 0.405243 7_1:-59885480 Msa1027470:CDS
GGCTGCTGAGTTGGTACAAC+AGG 0.408103 7_1:-59885964 Msa1027470:CDS
AATGAAAGAGTATTATTTCA+AGG 0.412072 7_1:-59884855 Msa1027470:CDS
AGGCTGGGGTATGTATATTC+TGG 0.412941 7_1:+59883807 None:intergenic
TCAACTAAGGCAGTAACTTA+AGG 0.415543 7_1:-59883396 Msa1027470:three_prime_UTR
TTCTGCGTTAATCATGGAAT+CGG 0.416130 7_1:-59888828 Msa1027470:five_prime_UTR
TTGAGCATTGAAAGATACTT+TGG 0.416508 7_1:+59884785 None:intergenic
AGAATGAAGACAGGGTACTA+TGG 0.423957 7_1:-59884130 Msa1027470:CDS
ATAATCCAGTCAAATCCTTC+TGG 0.433499 7_1:+59884687 None:intergenic
GAAGAGAGAGAAGAGAGAAA+GGG 0.442130 7_1:+59888778 None:intergenic
GACTTCAAACGCAACAAATC+AGG 0.442440 7_1:-59886628 Msa1027470:intron
AGCTTACAGTTCCTAAGATA+AGG 0.446048 7_1:+59883885 None:intergenic
TGATCCCAATGCTTGTGGTT+GGG 0.447418 7_1:-59884552 Msa1027470:CDS
GCACTTCACTTGAGATTGCC+AGG 0.449730 7_1:+59883768 None:intergenic
GATTCAAGCTGTCTCAAGAC+TGG 0.449905 7_1:+59884884 None:intergenic
AGTTAAGATATTTGTCGAAT+CGG 0.454272 7_1:+59884603 None:intergenic
GATAAGCAGTGAATTCCATT+TGG 0.456313 7_1:+59885408 None:intergenic
GATGCGAGATCAGATCATTA+TGG 0.457993 7_1:-59885808 Msa1027470:CDS
ACATGCCATGATTTATTTAG+CGG 0.458664 7_1:+59884056 None:intergenic
AATTCCATTTGGTATGGTCT+TGG 0.460571 7_1:+59885419 None:intergenic
CTCCGATGTTACAAGCCAAC+AGG 0.462187 7_1:-59887001 Msa1027470:intron
AATGCTTGTGGTTGGGCATA+CGG 0.463683 7_1:-59884545 Msa1027470:CDS
AGGTGAAACACATGCTTTGA+AGG 0.468782 7_1:+59885028 None:intergenic
ATGTCCAGCACGAATGATAT+GGG 0.468872 7_1:-59886714 Msa1027470:CDS
TTGACATATTTGGTCCAGTA+AGG 0.471463 7_1:+59883918 None:intergenic
AAAGAGTATTATTTCAAGGC+AGG 0.473099 7_1:-59884851 Msa1027470:CDS
TAGGTAAATACAACCTTTGG+AGG 0.475012 7_1:-59885872 Msa1027470:CDS
TTGTCTCAAATTAGTGAGAA+TGG 0.475535 7_1:+59883614 None:intergenic
AAGAGAGAGAAGAGAGAAAG+GGG 0.476681 7_1:+59888779 None:intergenic
AGAGAAAAGGATGGCAAAGC+GGG 0.478274 7_1:-59885985 Msa1027470:CDS
TGCAGCAATTAATAGAGAAA+AGG 0.478481 7_1:-59885998 Msa1027470:intron
TTATGGAATGTGGATCTTCA+TGG 0.483883 7_1:-59884668 Msa1027470:CDS
TCCAATTTCGGATAAACTTG+TGG 0.484620 7_1:+59884743 None:intergenic
ATAACTGCATGAAAGCTACT+TGG 0.487394 7_1:+59883443 None:intergenic
GATCTTCATGGAAAAGTTAA+CGG 0.487784 7_1:-59884656 Msa1027470:CDS
CACATCCGCTAAATAAATCA+TGG 0.490767 7_1:-59884061 Msa1027470:CDS
TTTGATTTCAGAATGAAGAC+AGG 0.492079 7_1:-59884139 Msa1027470:intron
GGCAAAGCGGGCTGCTGAGT+TGG 0.492938 7_1:-59885973 Msa1027470:CDS
GCTACAAACTGCTGATGAGC+AGG 0.495112 7_1:-59885487 Msa1027470:CDS
AGGGAAAGGAGATCCTCCTT+TGG 0.498057 7_1:+59888712 None:intergenic
TCTTGGCAGCCAACTGACTA+AGG 0.499672 7_1:+59885436 None:intergenic
TATGCCCAACCACAAGCATT+GGG 0.502397 7_1:+59884548 None:intergenic
CCATAGAATGTCATTAGCCC+TGG 0.504949 7_1:+59884089 None:intergenic
TAGGGCATAATGATAAAGAC+TGG 0.506359 7_1:+59885308 None:intergenic
GAAGAACGAAAACGAGAAGA+GGG 0.512017 7_1:+59888693 None:intergenic
TCTTAGACAAGAAGTTCAAA+AGG 0.513227 7_1:-59886489 Msa1027470:CDS
AGAAGAACGAAAACGAGAAG+AGG 0.513629 7_1:+59888692 None:intergenic
GCAGGCCACCCATCCACTAC+TGG 0.513960 7_1:-59884833 Msa1027470:CDS
ACATAGATTGTAGCTTTACC+AGG 0.515583 7_1:+59884950 None:intergenic
CTTGTGGAAGATAGAACCTC+AGG 0.518942 7_1:+59884759 None:intergenic
AAAATGTTGATGAATTTAAG+TGG 0.519458 7_1:-59884925 Msa1027470:CDS
TGTAAGCTAAGTGAATGGTC+TGG 0.522229 7_1:-59883870 Msa1027470:CDS
ATCTCCGTACGATCTATACT+TGG 0.524349 7_1:+59884014 None:intergenic
AGGCAATGATCAATCAACTA+AGG 0.527835 7_1:-59883409 Msa1027470:three_prime_UTR
GTTGTCCAGAAGGATTTGAC+TGG 0.529202 7_1:-59884692 Msa1027470:CDS
ACGAAAACGAGAAGAGGGAA+AGG 0.531444 7_1:+59888698 None:intergenic
TTGATCCCAATGCTTGTGGT+TGG 0.534567 7_1:-59884553 Msa1027470:CDS
GCAGTGAATTCCATTTGGTA+TGG 0.537356 7_1:+59885413 None:intergenic
AGGCCCCATATCATTCGTGC+TGG 0.538645 7_1:+59886710 None:intergenic
GTATGCCCAACCACAAGCAT+TGG 0.539148 7_1:+59884547 None:intergenic
CAGTCCAAGTATAGATCGTA+CGG 0.543562 7_1:-59884018 Msa1027470:CDS
AGCATCAGAGTATACAATGA+AGG 0.550055 7_1:+59883554 None:intergenic
AAGCACATTCCTTAGTCAGT+TGG 0.552027 7_1:-59885445 Msa1027470:CDS
GCTGCCAAGACCATACCAAA+TGG 0.554333 7_1:-59885423 Msa1027470:CDS
AGAATGCTGATTCTACCGTT+CGG 0.555890 7_1:-59885833 Msa1027470:CDS
AGATCAGATCATTATGGCTA+GGG 0.557672 7_1:-59885802 Msa1027470:CDS
GGAGGTAGTAATCTATGGTA+AGG 0.557714 7_1:+59885379 None:intergenic
ACATTACTGGCATATATCAC+AGG 0.557897 7_1:-59884484 Msa1027470:CDS
TAACTTAAGGTCTGTTCGTG+AGG 0.562838 7_1:-59883383 None:intergenic
TAACCAAATTCTCAGTCATA+GGG 0.564966 7_1:+59885334 None:intergenic
CCTTTGGTTCTGTTGTTGAG+CGG 0.565143 7_1:+59888728 None:intergenic
ACAAGAAGTTCAAAAGGAGA+AGG 0.565190 7_1:-59886483 Msa1027470:CDS
TCCCGTAAGGCTAGCCAGAA+GGG 0.568105 7_1:-59886343 Msa1027470:intron
GAGATCAGATCATTATGGCT+AGG 0.570674 7_1:-59885803 Msa1027470:CDS
GTCCCGTAAGGCTAGCCAGA+AGG 0.574160 7_1:-59886344 Msa1027470:CDS
AAATTAGGGACATTACCTCC+AGG 0.574173 7_1:-59884107 Msa1027470:CDS
AGAGTGTGATTAAATTGTCC+AGG 0.576855 7_1:-59883739 Msa1027470:three_prime_UTR
ACATGTTTGATTTGAAGGTG+TGG 0.576976 7_1:-59884517 Msa1027470:CDS
ACTGCATGAAAGCTACTTGG+AGG 0.577033 7_1:+59883446 None:intergenic
AATAAATCATGGCATGTACT+CGG 0.577057 7_1:-59884050 Msa1027470:CDS
GGCTGTTGCAGGCTACCAAA+TGG 0.577386 7_1:-59886894 Msa1027470:intron
TACCTGTTGGCTTGTAACAT+CGG 0.579742 7_1:+59886999 None:intergenic
TTAGAAGCACCAGTAGTGGA+TGG 0.580206 7_1:+59884824 None:intergenic
GGATAGAGATGATGAAGCAA+AGG 0.581325 7_1:+59883686 None:intergenic
CAGGCATTGACTCTATCACC+TGG 0.582641 7_1:+59883721 None:intergenic
GAAGTTCAAAAGGAGAAGGA+AGG 0.583365 7_1:-59886479 Msa1027470:CDS
GAGATTAGAAGCACCAGTAG+TGG 0.588353 7_1:+59884820 None:intergenic
TCAATTGTATGACTGCAAGT+TGG 0.592735 7_1:-59885532 Msa1027470:CDS
GGAACTGTAAGCTAAGTGAA+TGG 0.593776 7_1:-59883875 Msa1027470:CDS
AACCGGAAGAAGAAGTGTGA+AGG 0.593874 7_1:+59888630 None:intergenic
TACCAAATGGAGAGAACAGA+AGG 0.593932 7_1:-59886881 Msa1027470:CDS
CTGATCTCGCATCAACCGAA+CGG 0.595642 7_1:+59885818 None:intergenic
TTTCAATGCTCAACCACCTG+AGG 0.596049 7_1:-59884775 Msa1027470:CDS
TACAGTTCCTAAGATAAGGA+TGG 0.597078 7_1:+59883889 None:intergenic
ATTCAAGCTGTCTCAAGACT+GGG 0.597835 7_1:+59884885 None:intergenic
TAAAATCAATGACAATGGCG+TGG 0.599924 7_1:+59883664 None:intergenic
GTATACTCTGATGCTACGAA+TGG 0.599968 7_1:-59883546 Msa1027470:three_prime_UTR
TGTACCAAGAACTGCAAACA+CGG 0.602677 7_1:-59885740 Msa1027470:CDS
AAAATCAATGACAATGGCGT+GGG 0.604185 7_1:+59883665 None:intergenic
TGATGACATTGTTGTCCAGA+AGG 0.605837 7_1:-59884702 Msa1027470:CDS
TTTGACTGGATTATGGAATG+TGG 0.606404 7_1:-59884678 Msa1027470:CDS
ATTGTGCATACCTCTGGTGT+AGG 0.607000 7_1:+59885670 None:intergenic
TAGAAGCACCAGTAGTGGAT+GGG 0.607302 7_1:+59884825 None:intergenic
ACCGGAAGAAGAAGTGTGAA+GGG 0.612234 7_1:+59888631 None:intergenic
AATTGAGTTTATCAGTAACA+AGG 0.613631 7_1:+59885008 None:intergenic
GATAGAGATGATGAAGCAAA+GGG 0.617635 7_1:+59883687 None:intergenic
ATGCAGCAGGTCTTCCTCAG+TGG 0.620368 7_1:-59886374 Msa1027470:intron
GCAATTAATAGAGAAAAGGA+TGG 0.621349 7_1:-59885994 Msa1027470:CDS
CTCAACTGTTGTGAATGCAA+AGG 0.621934 7_1:-59885247 Msa1027470:intron
CTCAACAACAGAACCAAAGG+AGG 0.622199 7_1:-59888725 Msa1027470:CDS
CCGCTCAACAACAGAACCAA+AGG 0.623536 7_1:-59888728 Msa1027470:CDS
AATTTAATCACACTCTAACA+AGG 0.626203 7_1:+59883746 None:intergenic
AAGCACCAGTAGTGGATGGG+TGG 0.630751 7_1:+59884828 None:intergenic
AAAGCTAAAATCAATGACAA+TGG 0.634073 7_1:+59883659 None:intergenic
GTTGGTTATTGGGAAAGTAA+GGG 0.635336 7_1:-59885514 Msa1027470:CDS
GAGTCAGCGTGCTTTAGGTG+AGG 0.637586 7_1:-59885709 Msa1027470:CDS
TGAGCGGCATTGTATGTGTG+TGG 0.640401 7_1:+59888744 None:intergenic
ACAATGGTAATATGAAGCCA+TGG 0.641443 7_1:-59883968 Msa1027470:CDS
CTGGGGTATGTATATTCTGG+AGG 0.642602 7_1:+59883810 None:intergenic
TTGATTTCAGAATGAAGACA+GGG 0.646041 7_1:-59884138 Msa1027470:intron
AGTGGACTGATAGTCCCGTA+AGG 0.647693 7_1:-59886356 Msa1027470:CDS
AGGGCATAATGATAAAGACT+GGG 0.655474 7_1:+59885309 None:intergenic
GCAGCAGTTGTACACTACAA+TGG 0.656287 7_1:-59883984 Msa1027470:CDS
TAGAATGTCATTAGCCCTGG+AGG 0.657306 7_1:+59884092 None:intergenic
AATTAGGGACATTACCTCCA+GGG 0.657912 7_1:-59884106 Msa1027470:CDS
TAGAGAAAAGGATGGCAAAG+CGG 0.669580 7_1:-59885986 Msa1027470:CDS
ATTCTCACTAATTTGAGACA+AGG 0.669921 7_1:-59883612 Msa1027470:three_prime_UTR
TAGATTGTAGCTTTACCAGG+AGG 0.679016 7_1:+59884953 None:intergenic
TGTCCAGCACGAATGATATG+GGG 0.682822 7_1:-59886713 Msa1027470:CDS
GCAAAGGGCAGATAGAACAC+AGG 0.692379 7_1:+59883702 None:intergenic
AACGGTGCAGTTGAAACATG+TGG 0.702671 7_1:-59884638 Msa1027470:CDS
TTACTGGCATATATCACAGG+TGG 0.707903 7_1:-59884481 Msa1027470:CDS
GTGGAAGATAGAACCTCAGG+TGG 0.712503 7_1:+59884762 None:intergenic
CTGATGCTGACCTACACCAG+AGG 0.718609 7_1:-59885680 Msa1027470:intron
ACGGGACTATCAGTCCACTG+AGG 0.806472 7_1:+59886360 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAACAAAATGTTATTTTTT+TGG - chr7_1:59883838-59883857 Msa1027470:three_prime_UTR 10.0%
!!! CATTATTATAATTTTGTAAA+TGG - chr7_1:59884272-59884291 Msa1027470:intron 10.0%
!! ATTATTTATCAAATAATAGA+TGG + chr7_1:59887162-59887181 None:intergenic 10.0%
!!! ATTAGTTTTAAAATAGAAAT+TGG + chr7_1:59887948-59887967 None:intergenic 10.0%
!!! TTTATTGTTTTTGTTCAATT+TGG - chr7_1:59883776-59883795 Msa1027470:three_prime_UTR 15.0%
!!! TGTTTTCTTGATTTTTTATT+TGG - chr7_1:59883951-59883970 Msa1027470:CDS 15.0%
!!! ATAATTTTGTAAATGGAATT+TGG - chr7_1:59884279-59884298 Msa1027470:intron 15.0%
!! TAGCATTCTAATAATATAAT+TGG - chr7_1:59885158-59885177 Msa1027470:intron 15.0%
!! TTAATGAAAAATTAATGAGA+AGG + chr7_1:59885876-59885895 None:intergenic 15.0%
!! TTCACTAAAGATAATTAATT+AGG + chr7_1:59886670-59886689 None:intergenic 15.0%
!! AAATCAAACATGAAAAAAAA+TGG + chr7_1:59888118-59888137 None:intergenic 15.0%
!!! CTTGTTTAAAATTCAGTAAT+GGG - chr7_1:59883743-59883762 Msa1027470:three_prime_UTR 20.0%
!!! ATTTGTTAATCAACTGAATT+TGG - chr7_1:59884056-59884075 Msa1027470:CDS 20.0%
!! ATGTATGCATTGTATTAAAT+GGG - chr7_1:59884606-59884625 Msa1027470:CDS 20.0%
!! TACAAACACAATTTAGTTAA+TGG + chr7_1:59886001-59886020 None:intergenic 20.0%
!!! TATATCATGCTATTTGTATA+TGG + chr7_1:59886085-59886104 None:intergenic 20.0%
!!! CAAATTCATCATCTTTAAAA+AGG + chr7_1:59887107-59887126 None:intergenic 20.0%
!! AACATAAGTTAATGAATGAA+GGG + chr7_1:59887199-59887218 None:intergenic 20.0%
!!! AAAATGTTGATGAATTTAAG+TGG - chr7_1:59887344-59887363 Msa1027470:intron 20.0%
!!! AATGAAAGAGTATTATTTCA+AGG - chr7_1:59887414-59887433 Msa1027470:intron 20.0%
!! AAAAGAATCTTATCCAATTT+CGG + chr7_1:59887541-59887560 None:intergenic 20.0%
!!! TCAAAATTTTTTGCAATATG+TGG + chr7_1:59887700-59887719 None:intergenic 20.0%
!!! AAGGATTTTATAAGTAAACA+AGG + chr7_1:59888699-59888718 None:intergenic 20.0%
!!! TGCAGTTATTTTAATTTATG+AGG - chr7_1:59888840-59888859 Msa1027470:five_prime_UTR 20.0%
! ATAGAAACAAAACACGAAAT+GGG + chr7_1:59883713-59883732 None:intergenic 25.0%
! AATAGAAACAAAACACGAAA+TGG + chr7_1:59883714-59883733 None:intergenic 25.0%
!! CCATTACTGAATTTTAAACA+AGG + chr7_1:59883745-59883764 None:intergenic 25.0%
!! CCTTGTTTAAAATTCAGTAA+TGG - chr7_1:59883742-59883761 Msa1027470:three_prime_UTR 25.0%
!! TTTAGGAGGAAATTAGTTTA+AGG - chr7_1:59884143-59884162 Msa1027470:intron 25.0%
!! TTAGCTTAAGTTCATTGATT+TGG - chr7_1:59884235-59884254 Msa1027470:intron 25.0%
! AAAACCTATAAACTCTATAG+CGG + chr7_1:59884464-59884483 None:intergenic 25.0%
! GATGTATGCATTGTATTAAA+TGG - chr7_1:59884605-59884624 Msa1027470:CDS 25.0%
!!! TTATTGGTTTAAATCCTTGT+GGG + chr7_1:59884780-59884799 None:intergenic 25.0%
! CATATGATCCTTCTATTATA+TGG - chr7_1:59884984-59885003 Msa1027470:CDS 25.0%
!!! TTATACATTTTCAGGTTCAT+TGG - chr7_1:59885300-59885319 Msa1027470:CDS 25.0%
! AACAACATAGGGTAAAAAAA+TGG + chr7_1:59885355-59885374 None:intergenic 25.0%
!!! ATTTTTTTACCCTATGTTGT+TGG - chr7_1:59885354-59885373 Msa1027470:CDS 25.0%
!!! CTTTTGGAAAAAGAGATTTA+AGG + chr7_1:59885424-59885443 None:intergenic 25.0%
!! TAAATCTCTTTTTCCAAAAG+AGG - chr7_1:59885424-59885443 Msa1027470:CDS 25.0%
!!! ACAATATGGTATTGATTAGA+AGG + chr7_1:59885518-59885537 None:intergenic 25.0%
! TCTAATCAATACCATATTGT+AGG - chr7_1:59885518-59885537 Msa1027470:CDS 25.0%
! AAGAAGCAGAAAGATTATTT+CGG + chr7_1:59885602-59885621 None:intergenic 25.0%
! GTGAAATAAAATAAAGCATG+GGG + chr7_1:59885854-59885873 None:intergenic 25.0%
! GGTGAAATAAAATAAAGCAT+GGG + chr7_1:59885855-59885874 None:intergenic 25.0%
! AGGTGAAATAAAATAAAGCA+TGG + chr7_1:59885856-59885875 None:intergenic 25.0%
!! TAATTTTTCATTAATGCAGC+AGG - chr7_1:59885882-59885901 Msa1027470:CDS 25.0%
! TGAAAATATTGTTTGATCTG+TGG - chr7_1:59886172-59886191 Msa1027470:intron 25.0%
! ACATGAAAAAATCAAAGCAA+TGG - chr7_1:59886689-59886708 Msa1027470:CDS 25.0%
! CATGAAAAAATCAAAGCAAT+GGG - chr7_1:59886690-59886709 Msa1027470:CDS 25.0%
! CAACATAAGTTAATGAATGA+AGG + chr7_1:59887200-59887219 None:intergenic 25.0%
! AATTGAGTTTATCAGTAACA+AGG + chr7_1:59887264-59887283 None:intergenic 25.0%
!! GTTACTGATAAACTCAATTT+TGG - chr7_1:59887265-59887284 Msa1027470:intron 25.0%
! CAATAAAAACCACATATTCA+TGG + chr7_1:59887293-59887312 None:intergenic 25.0%
! AGTTAAGATATTTGTCGAAT+CGG + chr7_1:59887669-59887688 None:intergenic 25.0%
!!! AATGAACATGTTTGATTTGA+AGG - chr7_1:59887747-59887766 Msa1027470:intron 25.0%
! ATGGTTATACTTGACATATT+TGG + chr7_1:59888364-59888383 None:intergenic 25.0%
! AATTTAATCACACTCTAACA+AGG + chr7_1:59888526-59888545 None:intergenic 25.0%
! AAAGCTAAAATCAATGACAA+TGG + chr7_1:59888613-59888632 None:intergenic 25.0%
TGAAGTGAAGAAAAAGATGA+GGG + chr7_1:59883617-59883636 None:intergenic 30.0%
ATGAAGTGAAGAAAAAGATG+AGG + chr7_1:59883618-59883637 None:intergenic 30.0%
AAGTGTTAAGTAGTGCAATT+GGG - chr7_1:59883885-59883904 Msa1027470:CDS 30.0%
TGAGATAAAAACACATTTGC+AGG - chr7_1:59884178-59884197 Msa1027470:intron 30.0%
GAGATAAAAACACATTTGCA+GGG - chr7_1:59884179-59884198 Msa1027470:intron 30.0%
TAAACTCTATAGCGGTATAT+CGG + chr7_1:59884456-59884475 None:intergenic 30.0%
TATACCGCTATAGAGTTTAT+AGG - chr7_1:59884457-59884476 Msa1027470:intron 30.0%
! GCTATAGAGTTTATAGGTTT+TGG - chr7_1:59884463-59884482 Msa1027470:intron 30.0%
TCTAACACTCACTCTATTAT+TGG - chr7_1:59884699-59884718 Msa1027470:CDS 30.0%
!! CTTATTGGTTTAAATCCTTG+TGG + chr7_1:59884781-59884800 None:intergenic 30.0%
TCTAATACTCACTCTCTTAT+TGG + chr7_1:59884796-59884815 None:intergenic 30.0%
ACATCATTAATGAGTAGCAA+AGG + chr7_1:59884852-59884871 None:intergenic 30.0%
! TAGAGCATCCATATAATAGA+AGG + chr7_1:59884995-59885014 None:intergenic 30.0%
GTCCTGTTTAAACACAAATA+TGG - chr7_1:59885030-59885049 Msa1027470:CDS 30.0%
AGCCATATTTGTGTTTAAAC+AGG + chr7_1:59885035-59885054 None:intergenic 30.0%
!!! ATCCTCATCTTTTGTTGTTA+AGG - chr7_1:59885069-59885088 Msa1027470:intron 30.0%
! AGCTCGTTTTATACATTTTC+AGG - chr7_1:59885292-59885311 Msa1027470:CDS 30.0%
!! ATGGTATTGATTAGAAGGTT+GGG + chr7_1:59885513-59885532 None:intergenic 30.0%
!! TATGGTATTGATTAGAAGGT+TGG + chr7_1:59885514-59885533 None:intergenic 30.0%
AACATCAAGAACCTACAATA+TGG + chr7_1:59885532-59885551 None:intergenic 30.0%
GAAATAATCTTTCTGCTTCT+TGG - chr7_1:59885601-59885620 Msa1027470:intron 30.0%
AATACGACAATAATGCCTTT+CGG + chr7_1:59885710-59885729 None:intergenic 30.0%
TCTTAGACAAGAAGTTCAAA+AGG - chr7_1:59885780-59885799 Msa1027470:CDS 30.0%
! ATCATGCTATTTGTATATGG+TGG + chr7_1:59886082-59886101 None:intergenic 30.0%
ATCAAGGCTACTATTATTGT+AGG + chr7_1:59886134-59886153 None:intergenic 30.0%
TGCAGCAATTAATAGAGAAA+AGG - chr7_1:59886271-59886290 Msa1027470:intron 30.0%
GCAATTAATAGAGAAAAGGA+TGG - chr7_1:59886275-59886294 Msa1027470:intron 30.0%
TTCTAGGTAAATACAACCTT+TGG - chr7_1:59886394-59886413 Msa1027470:intron 30.0%
! TTTCATTTTCTTTCCTCCAA+AGG + chr7_1:59886413-59886432 None:intergenic 30.0%
TAACCAAATTCTCAGTCATA+GGG + chr7_1:59886938-59886957 None:intergenic 30.0%
TTAACCAAATTCTCAGTCAT+AGG + chr7_1:59886939-59886958 None:intergenic 30.0%
CAAAACATTGTCTGAGAATA+GGG + chr7_1:59886982-59887001 None:intergenic 30.0%
! AGTCTTTTATGATACATGTG+TGG - chr7_1:59887057-59887076 Msa1027470:intron 30.0%
! GTCTTTTATGATACATGTGT+GGG - chr7_1:59887058-59887077 Msa1027470:intron 30.0%
AAAGATGATGAATTTGAGCT+TGG - chr7_1:59887111-59887130 Msa1027470:intron 30.0%
AAGTTAATGAATGAAGGGTT+GGG + chr7_1:59887194-59887213 None:intergenic 30.0%
TAAGTTAATGAATGAAGGGT+TGG + chr7_1:59887195-59887214 None:intergenic 30.0%
!! AAAGAGTATTATTTCAAGGC+AGG - chr7_1:59887418-59887437 Msa1027470:intron 30.0%
!! TTGAGCATTGAAAGATACTT+TGG + chr7_1:59887487-59887506 None:intergenic 30.0%
GATCTTCATGGAAAAGTTAA+CGG - chr7_1:59887613-59887632 Msa1027470:intron 30.0%
GAGCAAATTGAACATAACAT+CGG - chr7_1:59887822-59887841 Msa1027470:intron 30.0%
TTACATCATGTTCCTATTCT+CGG - chr7_1:59887846-59887865 Msa1027470:intron 30.0%
! TTTGATTTCAGAATGAAGAC+AGG - chr7_1:59888130-59888149 Msa1027470:intron 30.0%
TTGATTTCAGAATGAAGACA+GGG - chr7_1:59888131-59888150 Msa1027470:intron 30.0%
ACATGCCATGATTTATTTAG+CGG + chr7_1:59888216-59888235 None:intergenic 30.0%
AATAAATCATGGCATGTACT+CGG - chr7_1:59888219-59888238 Msa1027470:intron 30.0%
TGTTCTTTGTACTTAGGAAT+TGG + chr7_1:59888431-59888450 None:intergenic 30.0%
!! AAAGAGTGTTCTTTGTACTT+AGG + chr7_1:59888437-59888456 None:intergenic 30.0%
TTGTCTCAAATTAGTGAGAA+TGG + chr7_1:59888658-59888677 None:intergenic 30.0%
! ATTCTCACTAATTTGAGACA+AGG - chr7_1:59888657-59888676 Msa1027470:CDS 30.0%
TCAGAAGTAGCTTTCTTATA+TGG - chr7_1:59888778-59888797 Msa1027470:five_prime_UTR 30.0%
!!! GCTTTCTTATATGGTTTTGA+AGG - chr7_1:59888787-59888806 Msa1027470:five_prime_UTR 30.0%
!!! GGTTTTGAAGGAGTAAATTA+AGG - chr7_1:59888799-59888818 Msa1027470:five_prime_UTR 30.0%
TTCTGCGTTAATCATGGAAT+CGG - chr7_1:59883441-59883460 Msa1027470:three_prime_UTR 35.0%
GAAGTGAAGAAAAAGATGAG+GGG + chr7_1:59883616-59883635 None:intergenic 35.0%
! TTTGGTAGTAGTGTAGTAGA+AGG - chr7_1:59883794-59883813 Msa1027470:three_prime_UTR 35.0%
TGTAAGATCTGTGCTTACTA+TGG - chr7_1:59883862-59883881 Msa1027470:exon 35.0%
! GAAGTGTTAAGTAGTGCAAT+TGG - chr7_1:59883884-59883903 Msa1027470:CDS 35.0%
! TAAGTAGTGCAATTGGGTTT+TGG - chr7_1:59883891-59883910 Msa1027470:CDS 35.0%
CTATGTTGTAGTGATTACTG+AGG - chr7_1:59883979-59883998 Msa1027470:CDS 35.0%
TTGTAGTGATTACTGAGGTT+TGG - chr7_1:59883984-59884003 Msa1027470:CDS 35.0%
ACTGAATTTGGCTACTGTAT+TGG - chr7_1:59884068-59884087 Msa1027470:CDS 35.0%
ACTGTATTGGATTTAGATGC+TGG - chr7_1:59884081-59884100 Msa1027470:CDS 35.0%
CTGTATTGGATTTAGATGCT+GGG - chr7_1:59884082-59884101 Msa1027470:CDS 35.0%
TGTATTGGATTTAGATGCTG+GGG - chr7_1:59884083-59884102 Msa1027470:CDS 35.0%
!! TTGAAATTTGAAGCACTGTG+TGG - chr7_1:59884110-59884129 Msa1027470:CDS 35.0%
TGTGTGGTTAAGTTCACTTT+AGG - chr7_1:59884126-59884145 Msa1027470:CDS 35.0%
!! AGTTCATTGATTTGGTGCAT+TGG - chr7_1:59884243-59884262 Msa1027470:intron 35.0%
TGGGATTAACAAAACGTAGA+TGG - chr7_1:59884503-59884522 Msa1027470:CDS 35.0%
AAAATTGAACCCACACAAAG+TGG + chr7_1:59884746-59884765 None:intergenic 35.0%
GTCCTTAACAACAAAAGATG+AGG + chr7_1:59885074-59885093 None:intergenic 35.0%
! CGGAAATTTTCTAGACTCAA+AGG + chr7_1:59885582-59885601 None:intergenic 35.0%
ATACGACAATAATGCCTTTC+GGG + chr7_1:59885709-59885728 None:intergenic 35.0%
! CTTGTCTAAGATGTGTTTCT+GGG + chr7_1:59885771-59885790 None:intergenic 35.0%
! TCTTGTCTAAGATGTGTTTC+TGG + chr7_1:59885772-59885791 None:intergenic 35.0%
ACAAGAAGTTCAAAAGGAGA+AGG - chr7_1:59885786-59885805 Msa1027470:CDS 35.0%
! ATCTCCCATACCTTTTAATG+TGG - chr7_1:59886031-59886050 Msa1027470:intron 35.0%
! AGCACCACATTAAAAGGTAT+GGG + chr7_1:59886038-59886057 None:intergenic 35.0%
AAGCACCACATTAAAAGGTA+TGG + chr7_1:59886039-59886058 None:intergenic 35.0%
ATCACAAGCACCACATTAAA+AGG + chr7_1:59886044-59886063 None:intergenic 35.0%
GCTACTATTATTGTAGGTTG+GGG + chr7_1:59886128-59886147 None:intergenic 35.0%
GGCTACTATTATTGTAGGTT+GGG + chr7_1:59886129-59886148 None:intergenic 35.0%
AGGCTACTATTATTGTAGGT+TGG + chr7_1:59886130-59886149 None:intergenic 35.0%
CAGAACATCATACTTCATCA+AGG + chr7_1:59886150-59886169 None:intergenic 35.0%
TAGGTAAATACAACCTTTGG+AGG - chr7_1:59886397-59886416 Msa1027470:intron 35.0%
AGATCAGATCATTATGGCTA+GGG - chr7_1:59886467-59886486 Msa1027470:intron 35.0%
TCAATTGTATGACTGCAAGT+TGG - chr7_1:59886737-59886756 Msa1027470:intron 35.0%
!! TATGACTGCAAGTTGGTTAT+TGG - chr7_1:59886744-59886763 Msa1027470:intron 35.0%
!! ATGACTGCAAGTTGGTTATT+GGG - chr7_1:59886745-59886764 Msa1027470:intron 35.0%
AGTTGGTTATTGGGAAAGTA+AGG - chr7_1:59886754-59886773 Msa1027470:intron 35.0%
GTTGGTTATTGGGAAAGTAA+GGG - chr7_1:59886755-59886774 Msa1027470:intron 35.0%
AATTCCATTTGGTATGGTCT+TGG + chr7_1:59886853-59886872 None:intergenic 35.0%
GATAAGCAGTGAATTCCATT+TGG + chr7_1:59886864-59886883 None:intergenic 35.0%
! ATAGGGAACTTTCTCTTTTC+AGG + chr7_1:59886921-59886940 None:intergenic 35.0%
AGGGCATAATGATAAAGACT+GGG + chr7_1:59886963-59886982 None:intergenic 35.0%
TAGGGCATAATGATAAAGAC+TGG + chr7_1:59886964-59886983 None:intergenic 35.0%
CCAAAACATTGTCTGAGAAT+AGG + chr7_1:59886983-59887002 None:intergenic 35.0%
! CCTATTCTCAGACAATGTTT+TGG - chr7_1:59886980-59886999 Msa1027470:intron 35.0%
!!! ATTTTGGAGCCATGAATATG+TGG - chr7_1:59887281-59887300 Msa1027470:intron 35.0%
! TGGTTTTTATTGAATCCTCC+TGG - chr7_1:59887301-59887320 Msa1027470:intron 35.0%
! ACATAGATTGTAGCTTTACC+AGG + chr7_1:59887322-59887341 None:intergenic 35.0%
TCCACAAGTTTATCCGAAAT+TGG - chr7_1:59887525-59887544 Msa1027470:intron 35.0%
TCCAATTTCGGATAAACTTG+TGG + chr7_1:59887529-59887548 None:intergenic 35.0%
ATAATCCAGTCAAATCCTTC+TGG + chr7_1:59887585-59887604 None:intergenic 35.0%
AGAAGGATTTGACTGGATTA+TGG - chr7_1:59887584-59887603 Msa1027470:intron 35.0%
TTTGACTGGATTATGGAATG+TGG - chr7_1:59887591-59887610 Msa1027470:intron 35.0%
TTATGGAATGTGGATCTTCA+TGG - chr7_1:59887601-59887620 Msa1027470:intron 35.0%
!! AATTTTGATCCCAATGCTTG+TGG - chr7_1:59887712-59887731 Msa1027470:intron 35.0%
!! ACATGTTTGATTTGAAGGTG+TGG - chr7_1:59887752-59887771 Msa1027470:intron 35.0%
! TTTGAAGGTGTGGAAAAAGA+AGG - chr7_1:59887762-59887781 Msa1027470:intron 35.0%
TGGAAAAAGAAGGACATTAC+TGG - chr7_1:59887772-59887791 Msa1027470:intron 35.0%
ACATTACTGGCATATATCAC+AGG - chr7_1:59887785-59887804 Msa1027470:intron 35.0%
! ACAGGGTACTATGGAAATTA+GGG - chr7_1:59888148-59888167 Msa1027470:intron 35.0%
CACATCCGCTAAATAAATCA+TGG - chr7_1:59888208-59888227 Msa1027470:intron 35.0%
ACAATGGTAATATGAAGCCA+TGG - chr7_1:59888301-59888320 Msa1027470:intron 35.0%
TTGACATATTTGGTCCAGTA+AGG + chr7_1:59888354-59888373 None:intergenic 35.0%
AGCTTACAGTTCCTAAGATA+AGG + chr7_1:59888387-59888406 None:intergenic 35.0%
TTGAGATTGCCAGGTTAAAA+AGG + chr7_1:59888495-59888514 None:intergenic 35.0%
AGAGTGTGATTAAATTGTCC+AGG - chr7_1:59888530-59888549 Msa1027470:intron 35.0%
GATAGAGATGATGAAGCAAA+GGG + chr7_1:59888585-59888604 None:intergenic 35.0%
AAAATCAATGACAATGGCGT+GGG + chr7_1:59888607-59888626 None:intergenic 35.0%
TAAAATCAATGACAATGGCG+TGG + chr7_1:59888608-59888627 None:intergenic 35.0%
AGCATCAGAGTATACAATGA+AGG + chr7_1:59888718-59888737 None:intergenic 35.0%
ATAACTGCATGAAAGCTACT+TGG + chr7_1:59888829-59888848 None:intergenic 35.0%
AGGCAATGATCAATCAACTA+AGG - chr7_1:59888860-59888879 Msa1027470:intron 35.0%
TCAACTAAGGCAGTAACTTA+AGG - chr7_1:59888873-59888892 Msa1027470:intron 35.0%
TGCACTTTCTGCGTTAATCA+TGG - chr7_1:59883435-59883454 Msa1027470:three_prime_UTR 40.0%
AGAAGAGAGAAAGGGGTTTA+TGG + chr7_1:59883486-59883505 None:intergenic 40.0%
AAGAGAGAGAAGAGAGAAAG+GGG + chr7_1:59883493-59883512 None:intergenic 40.0%
GAAGAGAGAGAAGAGAGAAA+GGG + chr7_1:59883494-59883513 None:intergenic 40.0%
AGAAGAGAGAGAAGAGAGAA+AGG + chr7_1:59883495-59883514 None:intergenic 40.0%
GAAGAACGAAAACGAGAAGA+GGG + chr7_1:59883579-59883598 None:intergenic 40.0%
AGAAGAACGAAAACGAGAAG+AGG + chr7_1:59883580-59883599 None:intergenic 40.0%
! TACTGAGGTTTGGAGTGATT+TGG - chr7_1:59883994-59884013 Msa1027470:CDS 40.0%
! ACTGAGGTTTGGAGTGATTT+GGG - chr7_1:59883995-59884014 Msa1027470:CDS 40.0%
CACACTAACACTGTCATCAA+TGG + chr7_1:59884029-59884048 None:intergenic 40.0%
GTGGTTAAGTTCACTTTAGG+AGG - chr7_1:59884129-59884148 Msa1027470:CDS 40.0%
TGTAGATCAGTGCACTATTG+CGG - chr7_1:59884328-59884347 Msa1027470:intron 40.0%
TATAGCGGTATATCGGATAG+CGG + chr7_1:59884449-59884468 None:intergenic 40.0%
CTTTGCACTTTAGATACCCT+AGG - chr7_1:59884546-59884565 Msa1027470:CDS 40.0%
ATTAAATGGGAACAGCCGAT+AGG - chr7_1:59884619-59884638 Msa1027470:CDS 40.0%
TTAAATGGGAACAGCCGATA+GGG - chr7_1:59884620-59884639 Msa1027470:CDS 40.0%
!! ATGGCTACAATGGTTGATAG+AGG - chr7_1:59884644-59884663 Msa1027470:CDS 40.0%
TTTCAAAGTGTAGACCCACA+AGG - chr7_1:59884763-59884782 Msa1027470:CDS 40.0%
! TTCCTCGGTTTAGAACTCAT+TGG - chr7_1:59884929-59884948 Msa1027470:CDS 40.0%
!! AACCAATGAGTTCTAAACCG+AGG + chr7_1:59884934-59884953 None:intergenic 40.0%
AGTGTAATGTCCTTGATGTG+AGG - chr7_1:59885120-59885139 Msa1027470:intron 40.0%
ATTTCTTCCTCCTCACATCA+AGG + chr7_1:59885133-59885152 None:intergenic 40.0%
TGATGTGAGGAGGAAGAAAT+AGG - chr7_1:59885133-59885152 Msa1027470:intron 40.0%
!! TACCTGTTGGCTTGTAACAT+CGG + chr7_1:59885273-59885292 None:intergenic 40.0%
GTATAAAACGAGCTACCTGT+TGG + chr7_1:59885286-59885305 None:intergenic 40.0%
TACCAAATGGAGAGAACAGA+AGG - chr7_1:59885388-59885407 Msa1027470:CDS 40.0%
!! GTATTGATTAGAAGGTTGGG+AGG + chr7_1:59885510-59885529 None:intergenic 40.0%
TATGTCCAGCACGAATGATA+TGG - chr7_1:59885554-59885573 Msa1027470:CDS 40.0%
ATGTCCAGCACGAATGATAT+GGG - chr7_1:59885555-59885574 Msa1027470:CDS 40.0%
GACTTCAAACGCAACAAATC+AGG - chr7_1:59885641-59885660 Msa1027470:intron 40.0%
CAAACGCAACAAATCAGGTT+AGG - chr7_1:59885646-59885665 Msa1027470:intron 40.0%
TACGACAATAATGCCTTTCG+GGG + chr7_1:59885708-59885727 None:intergenic 40.0%
GAAGTTCAAAAGGAGAAGGA+AGG - chr7_1:59885790-59885809 Msa1027470:CDS 40.0%
TAGAGAAAAGGATGGCAAAG+CGG - chr7_1:59886283-59886302 Msa1027470:intron 40.0%
! TCAGTTGATTCAGCAGTTCT+AGG - chr7_1:59886378-59886397 Msa1027470:intron 40.0%
!! AGAATGCTGATTCTACCGTT+CGG - chr7_1:59886436-59886455 Msa1027470:intron 40.0%
GATGCGAGATCAGATCATTA+TGG - chr7_1:59886461-59886480 Msa1027470:intron 40.0%
GAGATCAGATCATTATGGCT+AGG - chr7_1:59886466-59886485 Msa1027470:intron 40.0%
TGTACCAAGAACTGCAAACA+CGG - chr7_1:59886529-59886548 Msa1027470:intron 40.0%
CAGAAAATTGTGCATACCTC+TGG + chr7_1:59886608-59886627 None:intergenic 40.0%
AATGGGCCAAGTTCTTTCTA+AGG - chr7_1:59886707-59886726 Msa1027470:CDS 40.0%
CTTTCGCCTTAGAAAGAACT+TGG + chr7_1:59886716-59886735 None:intergenic 40.0%
AAGCACATTCCTTAGTCAGT+TGG - chr7_1:59886824-59886843 Msa1027470:intron 40.0%
GCAGTGAATTCCATTTGGTA+TGG + chr7_1:59886859-59886878 None:intergenic 40.0%
GGAGGTAGTAATCTATGGTA+AGG + chr7_1:59886893-59886912 None:intergenic 40.0%
!!! GGAACTTTCTCTTTTCAGGT+GGG + chr7_1:59886917-59886936 None:intergenic 40.0%
GTTCCCTATGACTGAGAATT+TGG - chr7_1:59886932-59886951 Msa1027470:intron 40.0%
CTCAACTGTTGTGAATGCAA+AGG - chr7_1:59887022-59887041 Msa1027470:intron 40.0%
GTTGTTGTCTTTGACATTGC+AGG - chr7_1:59887216-59887235 Msa1027470:intron 40.0%
AGGTGAAACACATGCTTTGA+AGG + chr7_1:59887244-59887263 None:intergenic 40.0%
! TAGATTGTAGCTTTACCAGG+AGG + chr7_1:59887319-59887338 None:intergenic 40.0%
ATTCAAGCTGTCTCAAGACT+GGG + chr7_1:59887387-59887406 None:intergenic 40.0%
TGATGACATTGTTGTCCAGA+AGG - chr7_1:59887567-59887586 Msa1027470:intron 40.0%
TTACTGGCATATATCACAGG+TGG - chr7_1:59887788-59887807 Msa1027470:intron 40.0%
ATATCACAGGTGGCAGAATT+TGG - chr7_1:59887798-59887817 Msa1027470:intron 40.0%
CATGTTCCTATTCTCGGAAT+TGG - chr7_1:59887852-59887871 Msa1027470:intron 40.0%
GAGAATCCAATTCCGAGAAT+AGG + chr7_1:59887861-59887880 None:intergenic 40.0%
AACCAAGGAATCTAGACTGT+TGG + chr7_1:59888007-59888026 None:intergenic 40.0%
AGCATGATTCCCTACAGTTA+GGG + chr7_1:59888047-59888066 None:intergenic 40.0%
! AGAATGAAGACAGGGTACTA+TGG - chr7_1:59888139-59888158 Msa1027470:intron 40.0%
! GACAGGGTACTATGGAAATT+AGG - chr7_1:59888147-59888166 Msa1027470:intron 40.0%
AAATTAGGGACATTACCTCC+AGG - chr7_1:59888162-59888181 Msa1027470:intron 40.0%
AATTAGGGACATTACCTCCA+GGG - chr7_1:59888163-59888182 Msa1027470:intron 40.0%
CAGTCCAAGTATAGATCGTA+CGG - chr7_1:59888251-59888270 Msa1027470:intron 40.0%
ATCTCCGTACGATCTATACT+TGG + chr7_1:59888258-59888277 None:intergenic 40.0%
GTCATTGCTATCTCTAACCA+TGG + chr7_1:59888321-59888340 None:intergenic 40.0%
!! TGACAAAGTATCGTCCTTAC+TGG - chr7_1:59888337-59888356 Msa1027470:intron 40.0%
GGAACTGTAAGCTAAGTGAA+TGG - chr7_1:59888394-59888413 Msa1027470:intron 40.0%
TGTAAGCTAAGTGAATGGTC+TGG - chr7_1:59888399-59888418 Msa1027470:intron 40.0%
TAAAAAGGAGACAGAAGGCT+GGG + chr7_1:59888480-59888499 None:intergenic 40.0%
TTAAAAAGGAGACAGAAGGC+TGG + chr7_1:59888481-59888500 None:intergenic 40.0%
CAGGTTAAAAAGGAGACAGA+AGG + chr7_1:59888485-59888504 None:intergenic 40.0%
! CTTCTGTCTCCTTTTTAACC+TGG - chr7_1:59888483-59888502 Msa1027470:intron 40.0%
GGATAGAGATGATGAAGCAA+AGG + chr7_1:59888586-59888605 None:intergenic 40.0%
GTATACTCTGATGCTACGAA+TGG - chr7_1:59888723-59888742 Msa1027470:CDS 40.0%
!! CCTTTGGTTCTGTTGTTGAG+CGG + chr7_1:59883544-59883563 None:intergenic 45.0%
CTCAACAACAGAACCAAAGG+AGG - chr7_1:59883544-59883563 Msa1027470:three_prime_UTR 45.0%
ACGAAAACGAGAAGAGGGAA+AGG + chr7_1:59883574-59883593 None:intergenic 45.0%
TCCCTTCACACTTCTTCTTC+CGG - chr7_1:59883637-59883656 Msa1027470:three_prime_UTR 45.0%
! ACCGGAAGAAGAAGTGTGAA+GGG + chr7_1:59883641-59883660 None:intergenic 45.0%
! AACCGGAAGAAGAAGTGTGA+AGG + chr7_1:59883642-59883661 None:intergenic 45.0%
! GAGAGAGAGAGAGTATGAAC+CGG + chr7_1:59883659-59883678 None:intergenic 45.0%
! GGTTTGGAGTGATTTGGGAT+AGG - chr7_1:59884000-59884019 Msa1027470:CDS 45.0%
ATTGGATTTAGATGCTGGGG+TGG - chr7_1:59884086-59884105 Msa1027470:CDS 45.0%
ATCACAGAGAATCCTACCAC+TGG + chr7_1:59884363-59884382 None:intergenic 45.0%
ATAGCGGTATATCGGATAGC+GGG + chr7_1:59884448-59884467 None:intergenic 45.0%
AGATACCCTAGGACTTTGTG+AGG - chr7_1:59884557-59884576 Msa1027470:CDS 45.0%
GCTAACCTCACAAAGTCCTA+GGG + chr7_1:59884565-59884584 None:intergenic 45.0%
TGCTAACCTCACAAAGTCCT+AGG + chr7_1:59884566-59884585 None:intergenic 45.0%
CCATTGTAGCCATTCCCTAT+CGG + chr7_1:59884637-59884656 None:intergenic 45.0%
ATATGTCCCACCACTTTGTG+TGG - chr7_1:59884733-59884752 Msa1027470:CDS 45.0%
TATGTCCCACCACTTTGTGT+GGG - chr7_1:59884734-59884753 Msa1027470:CDS 45.0%
TTGAACCCACACAAAGTGGT+GGG + chr7_1:59884742-59884761 None:intergenic 45.0%
ATTGAACCCACACAAAGTGG+TGG + chr7_1:59884743-59884762 None:intergenic 45.0%
GTTTCGCTCTTGTACTTCCT+CGG - chr7_1:59884914-59884933 Msa1027470:CDS 45.0%
GTAATGTCCTTGATGTGAGG+AGG - chr7_1:59885123-59885142 Msa1027470:intron 45.0%
CTGCAACAGCCAACAACATA+GGG + chr7_1:59885366-59885385 None:intergenic 45.0%
TGCCTTCTGTTCTCTCCATT+TGG + chr7_1:59885393-59885412 None:intergenic 45.0%
! CAGCTTGTGCTTACCTCTTT+TGG + chr7_1:59885440-59885459 None:intergenic 45.0%
TGTCCAGCACGAATGATATG+GGG - chr7_1:59885556-59885575 Msa1027470:CDS 45.0%
TCTGCTTCTTGGAGAGTTGT+TGG - chr7_1:59885612-59885631 Msa1027470:intron 45.0%
CTGCTTCTTGGAGAGTTGTT+GGG - chr7_1:59885613-59885632 Msa1027470:intron 45.0%
! AAGTTTGATTTCCCCCCGAA+AGG - chr7_1:59885692-59885711 Msa1027470:CDS 45.0%
ACGACAATAATGCCTTTCGG+GGG + chr7_1:59885707-59885726 None:intergenic 45.0%
GAGAAGGAAGGAAGATCTTC+AGG - chr7_1:59885802-59885821 Msa1027470:CDS 45.0%
AAGAATGATGCTCACCCTTC+TGG + chr7_1:59885943-59885962 None:intergenic 45.0%
AGAAGGGTGAGCATCATTCT+TGG - chr7_1:59885942-59885961 Msa1027470:CDS 45.0%
AGAGAAAAGGATGGCAAAGC+GGG - chr7_1:59886284-59886303 Msa1027470:intron 45.0%
TAAGCCGTGTTTGCAGTTCT+TGG + chr7_1:59886536-59886555 None:intergenic 45.0%
AAAGAGAGTCAGCGTGCTTT+AGG - chr7_1:59886555-59886574 Msa1027470:intron 45.0%
ATTGTGCATACCTCTGGTGT+AGG + chr7_1:59886602-59886621 None:intergenic 45.0%
TGGGAGGAGGTAGTAATCTA+TGG + chr7_1:59886898-59886917 None:intergenic 45.0%
!!! ACTTTCTCTTTTCAGGTGGG+AGG + chr7_1:59886914-59886933 None:intergenic 45.0%
!! GGGAACTTTCTCTTTTCAGG+TGG + chr7_1:59886918-59886937 None:intergenic 45.0%
ACTGTTGCAAGCAAAACACG+TGG + chr7_1:59887139-59887158 None:intergenic 45.0%
GATTCAAGCTGTCTCAAGAC+TGG + chr7_1:59887388-59887407 None:intergenic 45.0%
!! TAGAAGCACCAGTAGTGGAT+GGG + chr7_1:59887447-59887466 None:intergenic 45.0%
!! TTAGAAGCACCAGTAGTGGA+TGG + chr7_1:59887448-59887467 None:intergenic 45.0%
!! GAGATTAGAAGCACCAGTAG+TGG + chr7_1:59887452-59887471 None:intergenic 45.0%
TTTCAATGCTCAACCACCTG+AGG - chr7_1:59887494-59887513 Msa1027470:intron 45.0%
CTTGTGGAAGATAGAACCTC+AGG + chr7_1:59887513-59887532 None:intergenic 45.0%
GTTGTCCAGAAGGATTTGAC+TGG - chr7_1:59887577-59887596 Msa1027470:intron 45.0%
AACGGTGCAGTTGAAACATG+TGG - chr7_1:59887631-59887650 Msa1027470:intron 45.0%
TTGATCCCAATGCTTGTGGT+TGG - chr7_1:59887716-59887735 Msa1027470:intron 45.0%
TGATCCCAATGCTTGTGGTT+GGG - chr7_1:59887717-59887736 Msa1027470:intron 45.0%
TATGCCCAACCACAAGCATT+GGG + chr7_1:59887724-59887743 None:intergenic 45.0%
AATGCTTGTGGTTGGGCATA+CGG - chr7_1:59887724-59887743 Msa1027470:intron 45.0%
TATCCAACAGCCAAGATTCG+TGG + chr7_1:59887909-59887928 None:intergenic 45.0%
AGCCAACAGTCTAGATTCCT+TGG - chr7_1:59888002-59888021 Msa1027470:intron 45.0%
AGTCTAGATTCCTTGGTTGC+AGG - chr7_1:59888009-59888028 Msa1027470:intron 45.0%
CAGCATGATTCCCTACAGTT+AGG + chr7_1:59888048-59888067 None:intergenic 45.0%
TAGAATGTCATTAGCCCTGG+AGG + chr7_1:59888180-59888199 None:intergenic 45.0%
CCATAGAATGTCATTAGCCC+TGG + chr7_1:59888183-59888202 None:intergenic 45.0%
CCAGGGCTAATGACATTCTA+TGG - chr7_1:59888180-59888199 Msa1027470:intron 45.0%
ATCATGGCATGTACTCGGTT+TGG - chr7_1:59888224-59888243 Msa1027470:intron 45.0%
TCATGGCATGTACTCGGTTT+GGG - chr7_1:59888225-59888244 Msa1027470:intron 45.0%
GCAGCAGTTGTACACTACAA+TGG - chr7_1:59888285-59888304 Msa1027470:intron 45.0%
CTGGGGTATGTATATTCTGG+AGG + chr7_1:59888462-59888481 None:intergenic 45.0%
AGGCTGGGGTATGTATATTC+TGG + chr7_1:59888465-59888484 None:intergenic 45.0%
AAAAAGGAGACAGAAGGCTG+GGG + chr7_1:59888479-59888498 None:intergenic 45.0%
ACTGCATGAAAGCTACTTGG+AGG + chr7_1:59888826-59888845 None:intergenic 45.0%
TGAGCGGCATTGTATGTGTG+TGG + chr7_1:59883528-59883547 None:intergenic 50.0%
CCGCTCAACAACAGAACCAA+AGG - chr7_1:59883541-59883560 Msa1027470:three_prime_UTR 50.0%
AGGGAAAGGAGATCCTCCTT+TGG + chr7_1:59883560-59883579 None:intergenic 50.0%
!!! GCAGGGTTTTGAGTGTCGAA+TGG - chr7_1:59884196-59884215 Msa1027470:intron 50.0%
!!! GGGTTTTGAGTGTCGAATGG+TGG - chr7_1:59884199-59884218 Msa1027470:intron 50.0%
ATTGCGGAATGACCTACCAG+TGG - chr7_1:59884344-59884363 Msa1027470:intron 50.0%
CAGAGAATCCTACCACTGGT+AGG + chr7_1:59884359-59884378 None:intergenic 50.0%
!! ACTGCTGAAGGCGTCTCATA+GGG + chr7_1:59884394-59884413 None:intergenic 50.0%
TTCAGCAGTGGCAGTTGTCA+CGG - chr7_1:59884405-59884424 Msa1027470:intron 50.0%
CCGATAGGGAATGGCTACAA+TGG - chr7_1:59884634-59884653 Msa1027470:CDS 50.0%
CAAGAGCGAAACAGCAACAG+AGG + chr7_1:59884906-59884925 None:intergenic 50.0%
CTCCGATGTTACAAGCCAAC+AGG - chr7_1:59885268-59885287 Msa1027470:CDS 50.0%
CCTGCAACAGCCAACAACAT+AGG + chr7_1:59885367-59885386 None:intergenic 50.0%
! CCTATGTTGTTGGCTGTTGC+AGG - chr7_1:59885364-59885383 Msa1027470:CDS 50.0%
CGACAATAATGCCTTTCGGG+GGG + chr7_1:59885706-59885725 None:intergenic 50.0%
!! AGTGGACTGATAGTCCCGTA+AGG - chr7_1:59885913-59885932 Msa1027470:CDS 50.0%
CTGATCTCGCATCAACCGAA+CGG + chr7_1:59886454-59886473 None:intergenic 50.0%
GCTACAAACTGCTGATGAGC+AGG - chr7_1:59886782-59886801 Msa1027470:intron 50.0%
ACTGCTGATGAGCAGGTTAG+AGG - chr7_1:59886789-59886808 Msa1027470:intron 50.0%
TCTTGGCAGCCAACTGACTA+AGG + chr7_1:59886836-59886855 None:intergenic 50.0%
GCTGCCAAGACCATACCAAA+TGG - chr7_1:59886846-59886865 Msa1027470:CDS 50.0%
!!! TTCTCTTTTCAGGTGGGAGG+AGG + chr7_1:59886911-59886930 None:intergenic 50.0%
GTGGAAGATAGAACCTCAGG+TGG + chr7_1:59887510-59887529 None:intergenic 50.0%
GTATGCCCAACCACAAGCAT+TGG + chr7_1:59887725-59887744 None:intergenic 50.0%
TGGTTGCGTGCAGTACTATG+TGG + chr7_1:59887889-59887908 None:intergenic 50.0%
CAACCACGAATCTTGGCTGT+TGG - chr7_1:59887903-59887922 Msa1027470:intron 50.0%
! ACTGTTGGCTGAGGATCAGA+CGG + chr7_1:59887992-59888011 None:intergenic 50.0%
! GGAATCTAGACTGTTGGCTG+AGG + chr7_1:59888001-59888020 None:intergenic 50.0%
TGTGTGCTTGCCCTAACTGT+AGG - chr7_1:59888034-59888053 Msa1027470:intron 50.0%
GTGTGCTTGCCCTAACTGTA+GGG - chr7_1:59888035-59888054 Msa1027470:intron 50.0%
GCACTTCACTTGAGATTGCC+AGG + chr7_1:59888504-59888523 None:intergenic 50.0%
!! CAGGCATTGACTCTATCACC+TGG + chr7_1:59888551-59888570 None:intergenic 50.0%
GCAAAGGGCAGATAGAACAC+AGG + chr7_1:59888570-59888589 None:intergenic 50.0%
CGGAATGACCTACCAGTGGT+AGG - chr7_1:59884348-59884367 Msa1027470:intron 55.0%
! AAGGCGTCTCATAGGGGAGA+TGG + chr7_1:59884387-59884406 None:intergenic 55.0%
!! CTGCTGAAGGCGTCTCATAG+GGG + chr7_1:59884393-59884412 None:intergenic 55.0%
!! CACTGCTGAAGGCGTCTCAT+AGG + chr7_1:59884395-59884414 None:intergenic 55.0%
CTATGAGACGCCTTCAGCAG+TGG - chr7_1:59884393-59884412 Msa1027470:intron 55.0%
GTGACAACTGCCACTGCTGA+AGG + chr7_1:59884406-59884425 None:intergenic 55.0%
GTTGTCACGGTCGCGAATTG+TGG - chr7_1:59884418-59884437 Msa1027470:intron 55.0%
!! CGGTATATCGGATAGCGGGA+TGG + chr7_1:59884444-59884463 None:intergenic 55.0%
TGGCACTACACGTCGCTATC+TGG - chr7_1:59884483-59884502 Msa1027470:CDS 55.0%
GGCACTACACGTCGCTATCT+GGG - chr7_1:59884484-59884503 Msa1027470:CDS 55.0%
TGGGAACAGCCGATAGGGAA+TGG - chr7_1:59884625-59884644 Msa1027470:CDS 55.0%
GGCTGTTGCAGGCTACCAAA+TGG - chr7_1:59885375-59885394 Msa1027470:CDS 55.0%
AGGCCCCATATCATTCGTGC+TGG + chr7_1:59885562-59885581 None:intergenic 55.0%
ATGCAGCAGGTCTTCCTCAG+TGG - chr7_1:59885895-59885914 Msa1027470:CDS 55.0%
ACGGGACTATCAGTCCACTG+AGG + chr7_1:59885912-59885931 None:intergenic 55.0%
! TCCCGTAAGGCTAGCCAGAA+GGG - chr7_1:59885926-59885945 Msa1027470:CDS 55.0%
!! ACCCTTCTGGCTAGCCTTAC+GGG + chr7_1:59885930-59885949 None:intergenic 55.0%
!! CACCCTTCTGGCTAGCCTTA+CGG + chr7_1:59885931-59885950 None:intergenic 55.0%
!! GGCTGCTGAGTTGGTACAAC+AGG - chr7_1:59886305-59886324 Msa1027470:intron 55.0%
! GAGTCAGCGTGCTTTAGGTG+AGG - chr7_1:59886560-59886579 Msa1027470:intron 55.0%
CTGATGCTGACCTACACCAG+AGG - chr7_1:59886589-59886608 Msa1027470:intron 55.0%
!! AAGCACCAGTAGTGGATGGG+TGG + chr7_1:59887444-59887463 None:intergenic 55.0%
CTGCACGCAACCACGAATCT+TGG - chr7_1:59887896-59887915 Msa1027470:intron 55.0%
AGCACACAGTCCTGCAACCA+AGG + chr7_1:59888022-59888041 None:intergenic 55.0%
! GTCCCGTAAGGCTAGCCAGA+AGG - chr7_1:59885925-59885944 Msa1027470:CDS 60.0%
!! GGCAAAGCGGGCTGCTGAGT+TGG - chr7_1:59886296-59886315 Msa1027470:intron 65.0%
GCAGGCCACCCATCCACTAC+TGG - chr7_1:59887436-59887455 Msa1027470:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 59883384 59888907 59883384 ID=Msa1027470;Name=Msa1027470
chr7_1 mRNA 59883384 59888907 59883384 ID=Msa1027470-mRNA-1;Parent=Msa1027470;Name=Msa1027470-mRNA-1;_AED=0.06;_eAED=0.06;_QI=134|1|1|1|0.9|0.81|11|482|669
chr7_1 exon 59883384 59884150 59883384 ID=Msa1027470-mRNA-1:exon:12296;Parent=Msa1027470-mRNA-1
chr7_1 exon 59884472 59885053 59884472 ID=Msa1027470-mRNA-1:exon:12295;Parent=Msa1027470-mRNA-1
chr7_1 exon 59885248 59885605 59885248 ID=Msa1027470-mRNA-1:exon:12294;Parent=Msa1027470-mRNA-1
chr7_1 exon 59885681 59886015 59885681 ID=Msa1027470-mRNA-1:exon:12293;Parent=Msa1027470-mRNA-1
chr7_1 exon 59886344 59886390 59886344 ID=Msa1027470-mRNA-1:exon:12292;Parent=Msa1027470-mRNA-1
chr7_1 exon 59886468 59886531 59886468 ID=Msa1027470-mRNA-1:exon:12291;Parent=Msa1027470-mRNA-1
chr7_1 exon 59886629 59886751 59886629 ID=Msa1027470-mRNA-1:exon:12290;Parent=Msa1027470-mRNA-1
chr7_1 exon 59886846 59886905 59886846 ID=Msa1027470-mRNA-1:exon:12289;Parent=Msa1027470-mRNA-1
chr7_1 exon 59887002 59887036 59887002 ID=Msa1027470-mRNA-1:exon:12288;Parent=Msa1027470-mRNA-1
chr7_1 exon 59888633 59888862 59888633 ID=Msa1027470-mRNA-1:exon:12287;Parent=Msa1027470-mRNA-1
chr7_1 exon 59888883 59888907 59888883 ID=Msa1027470-mRNA-1:exon:12286;Parent=Msa1027470-mRNA-1
chr7_1 five_prime_UTR 59888883 59888907 59888883 ID=Msa1027470-mRNA-1:five_prime_utr;Parent=Msa1027470-mRNA-1
chr7_1 five_prime_UTR 59888754 59888862 59888754 ID=Msa1027470-mRNA-1:five_prime_utr;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59888633 59888753 59888633 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59887002 59887036 59887002 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59886846 59886905 59886846 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59886629 59886751 59886629 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59886468 59886531 59886468 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59886344 59886390 59886344 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59885681 59886015 59885681 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59885248 59885605 59885248 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59884472 59885053 59884472 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 CDS 59883866 59884150 59883866 ID=Msa1027470-mRNA-1:cds;Parent=Msa1027470-mRNA-1
chr7_1 three_prime_UTR 59883384 59883865 59883384 ID=Msa1027470-mRNA-1:three_prime_utr;Parent=Msa1027470-mRNA-1
Gene Sequence

>Msa1027470

ATGCCGCTCAACAACAGAACCAAAGGAGGATCTCCTTTCCCTCTTCTCGTTTTCGTTCTTCTCTGTCTTCTCGCTCCCCTCATCTTTTTCTTCACTTCATCCCTTCACACTTCTTCTTCCGATCACAATGATATCTCCGATGTTACAAGCCAACAGGCTACCAAATGGAGAGAACAGAAGGCACTACACGACCTTAAATCTCTTTTTCCAAAAGAGGTTCTTGATGTTATTATGTCCAGCACGAATGATATGGGGCCTTTGAGTCTAGAAAATTTCCGAAATAATCTTTCTGCTTCTTGGAGAGTTGTTGGGTCAAAGACTTCAAACGCAACAAATCAGCTAAACAACCCAGAAACACATCTTAGACAAGAAGTTCAAAAGGAGAAGGAAGGAAGATCTTCAGCAGGTCTTCCTCAGTGGACTGATAGTCCCGTAAGGCTAGCCAGAAGGCAATTAATAGAGAAAAGGATGGCAAAGCGGGCTGCTGAGTTGGTACAACAGGATGATGAAGTTATTGTAAAACTTGAAGATTTAGCTATTGAACGTTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACCTTTGGAGGAAAGAAAATGAAAATGAGAATGCTGATTCTACCGTTCGGTTGATGCGAGATCAGATCATTATGGCTAGGGTATACTTGAGTATTGCAAAGATGAAGAACAAGCTTGAATTGTACCAAGAACTGCAAACACGGCTTAAAGAGAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGACCTACACCAGAGTGAACATGAAAAAATCAAAGCAATGGGCCAAGTTCTTTCTAAGGCGAAAGATCAATTGTATGACTGCAAGTTGGTTATTGGGAAAGTAAGGGCAATGCTACAAACTGCTGATGAGCAGGTTAGAGGCTTGAAGAAACAAAGCACATTCCTTAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCACTGCTTATCGATGCGCCTTACCATAGATTACTACCTCCTCCCACCTGAAAAGAGAAAGTTCCCTATGACTGAGAATTTGGTTAATCCCAGTCTTTATCATTATGCCCTATTCTCAGACAATGTTTTGGCTGCATCTGTTGTTGTCAACTCAACTGTTGTGAATGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACTGATAAACTCAATTTTGGAGCCATGAATATGTGGTTTTTATTGAATCCTCCTGGTAAAGCTACAATCTATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCTTACTGCCCAGTCTTGAGACAGCTTGAATCTGCGACAATGAAAGAGTATTATTTCAAGGCAGGCCACCCATCCACTACTGGTGCTTCTAATCTCAAATACAGAAATCCAAAGTATCTTTCAATGCTCAACCACCTGAGGTTCTATCTTCCACAAGTTTATCCGAAATTGGATAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGAATGTGGATCTTCATGGAAAAGTTAACGGTGCAGTTGAAACATGTGGTGAGAGCTTTCACCGATTCGACAAATATCTTAACTTTTCAAATCCACATATTGCAAAAAATTTTGATCCCAATGCTTGTGGTTGGGCATACGGAATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAGGACATTACTGGCATATATCACAGGTGGCAGAATTTGAATGAAGACAGGGTACTATGGAAATTAGGGACATTACCTCCAGGGCTAATGACATTCTATGGATTAACACATCCGCTAAATAAATCATGGCATGTACTCGGTTTGGGTTACAGTCCAAGTATAGATCGTACGGAGATTGAGAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCATGGTTAGAGATAGCAATGACAAAGTATCGTCCTTACTGGACCAAATATGTCAAGTATAACCATCCTTATCTTAGGAACTGTAAGCTAAGTGAATGGTCTGGATAA
Protein sequence

>Msa1027470

MPLNNRTKGGSPFPLLVFVLLCLLAPLIFFFTSSLHTSSSDHNDISDVTSQQATKWREQKALHDLKSLFPKEVLDVIMSSTNDMGPLSLENFRNNLSASWRVVGSKTSNATNQLNNPETHLRQEVQKEKEGRSSAGLPQWTDSPVRLARRQLIEKRMAKRAAELVQQDDEVIVKLEDLAIERSKSVDSAVLGKYNLWRKENENENADSTVRLMRDQIIMARVYLSIAKMKNKLELYQELQTRLKESQRALGEATSDADLHQSEHEKIKAMGQVLSKAKDQLYDCKLVIGKVRAMLQTADEQVRGLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPMTENLVNPSLYHYALFSDNVLAASVVVNSTVVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIYVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPSTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWNVDLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNCKLSEWSG*