Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416020 | ABY76166.1 | 99.025 | 718 | 4 | 1 | 1 | 718 | 1 | 715 | 0.0 | 1433 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416020 | sp|O04015|P5CS_ACTDE | 78.691 | 718 | 150 | 1 | 1 | 718 | 1 | 715 | 0.0 | 1117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416020 | B0LSX0 | 99.025 | 718 | 4 | 1 | 1 | 718 | 1 | 715 | 0.0 | 1433 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035730 | Msa0416020 | 0.805173 | 1.516647e-49 | -8.615850e-47 |
| Msa0124910 | Msa0416020 | 0.816280 | 5.998022e-52 | -8.615850e-47 |
| Msa0169410 | Msa0416020 | 0.813567 | 2.397567e-51 | -8.615850e-47 |
| Msa0195230 | Msa0416020 | 0.810333 | 1.214386e-50 | -8.615850e-47 |
| Msa0195260 | Msa0416020 | 0.804704 | 1.901420e-49 | -8.615850e-47 |
| Msa0218040 | Msa0416020 | 0.805668 | 1.194346e-49 | -8.615850e-47 |
| Msa0231630 | Msa0416020 | 0.814119 | 1.811804e-51 | -8.615850e-47 |
| Msa0368640 | Msa0416020 | 0.883728 | 3.508738e-71 | -8.615850e-47 |
| Msa0389690 | Msa0416020 | 0.943137 | 2.068436e-102 | -8.615850e-47 |
| Msa0416020 | Msa0430230 | 0.848616 | 5.472284e-60 | -8.615850e-47 |
| Msa0416020 | Msa0435570 | 0.801609 | 8.305490e-49 | -8.615850e-47 |
| Msa0416020 | Msa0480280 | 0.873001 | 2.060869e-67 | -8.615850e-47 |
| Msa0416020 | Msa0508180 | 0.968939 | 2.140412e-129 | -8.615850e-47 |
| Msa0416020 | Msa0538990 | 0.810788 | 9.683975e-51 | -8.615850e-47 |
| Msa0416020 | Msa0586450 | 0.801447 | 8.967442e-49 | -8.615850e-47 |
| Msa0416020 | Msa0705680 | 0.813262 | 2.798140e-51 | -8.615850e-47 |
| Msa0416020 | Msa0716890 | 0.805131 | 1.548272e-49 | -8.615850e-47 |
| Msa0416020 | Msa0756610 | 0.803718 | 3.049037e-49 | -8.615850e-47 |
| Msa0416020 | Msa0810930 | 0.857083 | 2.077848e-62 | -8.615850e-47 |
| Msa0416020 | Msa0820140 | 0.811026 | 8.600385e-51 | -8.615850e-47 |
| Msa0416020 | Msa0835930 | 0.827830 | 1.259611e-54 | -8.615850e-47 |
| Msa0416020 | Msa0837710 | 0.804308 | 2.299488e-49 | -8.615850e-47 |
| Msa0416020 | Msa0851160 | 0.836165 | 1.098059e-56 | -8.615850e-47 |
| Msa0416020 | Msa0902360 | 0.863617 | 2.190353e-64 | -8.615850e-47 |
| Msa0416020 | Msa1027470 | 0.812343 | 4.446025e-51 | -8.615850e-47 |
| Msa0416020 | Msa1070890 | 0.803464 | 3.442563e-49 | -8.615850e-47 |
| Msa0416020 | Msa1074900 | 0.813345 | 2.682490e-51 | -8.615850e-47 |
| Msa0416020 | Msa1165090 | 0.810571 | 1.078675e-50 | -8.615850e-47 |
| Msa0416020 | Msa1207190 | 0.807651 | 4.555575e-50 | -8.615850e-47 |
| Msa0416020 | Msa1216980 | 0.820135 | 8.046884e-53 | -8.615850e-47 |
| Msa0416020 | Msa1247510 | 0.800249 | 1.574829e-48 | -8.615850e-47 |
| Msa0416020 | Msa1262670 | 0.830777 | 2.425654e-55 | -8.615850e-47 |
| Msa0416020 | Msa1305250 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0416020 | Msa1373170 | 0.818549 | 1.850014e-52 | -8.615850e-47 |
| Msa0416020 | Msa1396100 | 0.803214 | 3.879656e-49 | -8.615850e-47 |
| Msa0416020 | Msa1414390 | 0.859967 | 2.866675e-63 | -8.615850e-47 |
| Msa0416020 | Msa1427110 | 0.802317 | 5.941755e-49 | -8.615850e-47 |
| Msa0268110 | Msa0416020 | 0.800268 | 1.560951e-48 | -8.615850e-47 |
| Msa0301520 | Msa0416020 | 0.803333 | 3.664551e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416020 | MtrunA17_Chr3g0112411 | 97.354 | 718 | 16 | 1 | 1 | 718 | 1 | 715 | 0.0 | 1410 |
| Msa0416020 | MtrunA17_Chr4g0008951 | 75.664 | 715 | 170 | 2 | 1 | 715 | 41 | 751 | 0.0 | 1098 |
| Msa0416020 | MtrunA17_Chr7g0239721 | 74.266 | 715 | 178 | 2 | 5 | 716 | 2 | 713 | 0.0 | 1067 |
| Msa0416020 | MtrunA17_Chr4g0053671 | 47.619 | 105 | 52 | 2 | 564 | 667 | 46 | 148 | 4.91e-20 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416020 | AT3G55610.1 | 75.140 | 716 | 175 | 1 | 1 | 716 | 1 | 713 | 0.0 | 1078 |
| Msa0416020 | AT2G39800.1 | 74.860 | 716 | 177 | 1 | 1 | 716 | 1 | 713 | 0.0 | 1066 |
| Msa0416020 | AT2G39800.4 | 74.860 | 716 | 177 | 1 | 1 | 716 | 1 | 713 | 0.0 | 1066 |
| Msa0416020 | AT2G39800.3 | 74.441 | 716 | 177 | 2 | 1 | 716 | 1 | 710 | 0.0 | 1053 |
| Msa0416020 | AT3G55610.2 | 73.718 | 624 | 161 | 1 | 1 | 624 | 1 | 621 | 0.0 | 912 |
| Msa0416020 | AT2G39800.2 | 74.715 | 613 | 152 | 1 | 104 | 716 | 1 | 610 | 0.0 | 907 |
Find 170 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCACTTATGTGCATCTTTA+TGG | 0.086165 | 3_2:-62586559 | None:intergenic |
| TGTTGATAAATCTGCTAATT+TGG | 0.147585 | 3_2:+62588495 | Msa0416020:CDS |
| ATTCATCATATAAATCTTTA+TGG | 0.156682 | 3_2:+62589028 | Msa0416020:CDS |
| AGGATTCTTCTGGCATATTT+TGG | 0.157564 | 3_2:+62585923 | Msa0416020:intron |
| AGATTAGCAGTTGGAAAATT+AGG | 0.160121 | 3_2:+62584734 | Msa0416020:CDS |
| TCTTGGTTATGAAGTTATTT+TGG | 0.185023 | 3_2:+62584892 | Msa0416020:CDS |
| GCTTGCAGAGGGGTTAATTT+TGG | 0.208579 | 3_2:+62587463 | Msa0416020:intron |
| CCTTCCCAACATTAGGAAAT+TGG | 0.215317 | 3_2:+62590477 | Msa0416020:three_prime_UTR |
| CATCAAAATGAAATTACTTT+TGG | 0.217780 | 3_2:+62586087 | Msa0416020:CDS |
| TATGTAGGTGTTACTTTATA+TGG | 0.224316 | 3_2:+62588896 | Msa0416020:intron |
| ACTGTTGGTTCAAAACTTAT+TGG | 0.234157 | 3_2:+62588092 | Msa0416020:CDS |
| CATAGAAACAAAAGTGAAAT+TGG | 0.260849 | 3_2:+62584410 | None:intergenic |
| GCGTCGTTCTCGTTGAATAT+TGG | 0.271416 | 3_2:-62585571 | None:intergenic |
| ATTAAGGAGCTAAATATTCT+TGG | 0.303939 | 3_2:+62584875 | Msa0416020:CDS |
| GGAGAAAACGTCATCTCCTT+TGG | 0.317664 | 3_2:+62587484 | Msa0416020:CDS |
| CATGTTTCCTTCCCAACATT+AGG | 0.319769 | 3_2:+62590470 | Msa0416020:three_prime_UTR |
| GATTAGCAGTTGGAAAATTA+GGG | 0.321381 | 3_2:+62584735 | Msa0416020:CDS |
| AAACTGAACTTTGTGCAAAA+TGG | 0.325995 | 3_2:-62587955 | None:intergenic |
| GGACTGTTCCAGACGGCTTC+AGG | 0.330973 | 3_2:+62586628 | Msa0416020:CDS |
| AAAGTTGCTTTCTAAAATCT+TGG | 0.335431 | 3_2:-62585510 | None:intergenic |
| TCGGTTTGGTGGAGAGAAAC+AGG | 0.341522 | 3_2:-62584484 | None:intergenic |
| TTTATCAGCTTTGTTGGCCT+TGG | 0.347250 | 3_2:+62585957 | Msa0416020:CDS |
| TGACAGTTTATCAGCTTTGT+TGG | 0.347433 | 3_2:+62585951 | Msa0416020:CDS |
| TTCAGCGATGGAGCACGATT+TGG | 0.347554 | 3_2:+62589477 | Msa0416020:CDS |
| TACGTTACAGGCCGTGTCTT+CGG | 0.359125 | 3_2:+62586751 | Msa0416020:intron |
| TCGACGAAAATCCCTGTTCT+AGG | 0.362437 | 3_2:+62588327 | Msa0416020:CDS |
| GGAAACACTTCTTGTTCATA+AGG | 0.364819 | 3_2:+62588666 | Msa0416020:intron |
| ACTTCTTGTTCATAAGGATT+TGG | 0.368512 | 3_2:+62588672 | Msa0416020:CDS |
| GGGTCGGCGTTCGCCATCTT+CGG | 0.394626 | 3_2:-62584503 | None:intergenic |
| AAAATCCTTGGTTGCTAGGC+TGG | 0.395053 | 3_2:+62586886 | Msa0416020:CDS |
| TCATCAGGTGCTGTCGGCCT+CGG | 0.398416 | 3_2:+62584917 | Msa0416020:CDS |
| TTATGATGATTTGTTTAGTC+AGG | 0.400090 | 3_2:+62585286 | Msa0416020:CDS |
| ATCACCAATTTCCTAATGTT+GGG | 0.401712 | 3_2:-62590481 | None:intergenic |
| CACAAGCAGGATTCATGCTC+GGG | 0.402561 | 3_2:+62589616 | Msa0416020:CDS |
| GGTAATGATAACAGGAATTC+CGG | 0.408004 | 3_2:-62586178 | None:intergenic |
| GAGAAAACGTCATCTCCTTT+GGG | 0.408409 | 3_2:+62587485 | Msa0416020:CDS |
| TTCAACAGAGAACTTGCTTT+CGG | 0.414727 | 3_2:-62588923 | None:intergenic |
| ATCAAGTAGTTAGGTCTTTG+TGG | 0.417195 | 3_2:-62590260 | None:intergenic |
| AAGCCACAAGTTGAACTTGA+TGG | 0.417920 | 3_2:+62585221 | Msa0416020:CDS |
| GGCGTTCGCCATCTTCGGTT+TGG | 0.419800 | 3_2:-62584498 | None:intergenic |
| TTTACCTGTACCAATGCATC+AGG | 0.419919 | 3_2:-62587536 | None:intergenic |
| ACAAGTTTATTGCTGCCTCT+TGG | 0.421855 | 3_2:-62588288 | None:intergenic |
| GTGCACCTGGTAATGATAAC+AGG | 0.425783 | 3_2:-62586186 | None:intergenic |
| GATCACCAATTTCCTAATGT+TGG | 0.427212 | 3_2:-62590482 | None:intergenic |
| ATTTGAACAGATAGCTTCCT+TGG | 0.437264 | 3_2:+62587872 | Msa0416020:intron |
| CATAAGGATTTGGTAGAGAA+AGG | 0.437766 | 3_2:+62588682 | Msa0416020:CDS |
| AACAATCCATCAACTCCTAC+TGG | 0.437800 | 3_2:-62589641 | None:intergenic |
| CGGGGTCCAGTAGGAGTTGA+TGG | 0.437815 | 3_2:+62589635 | Msa0416020:CDS |
| TAAAGAGACCTGAAGCCGTC+TGG | 0.452613 | 3_2:-62586636 | None:intergenic |
| TGCAATAATTCGTATGTTGT+TGG | 0.453587 | 3_2:-62587052 | None:intergenic |
| AGAACGACGCAGTCAGTACT+AGG | 0.453594 | 3_2:+62585584 | Msa0416020:CDS |
| TTACCAGCATGACCTAGAAC+AGG | 0.453722 | 3_2:-62588339 | None:intergenic |
| CGAGTCTCGCCCTGATGCAT+TGG | 0.455731 | 3_2:+62587526 | Msa0416020:CDS |
| GATGTAGATGGTCTTTATAA+TGG | 0.457455 | 3_2:+62586012 | Msa0416020:CDS |
| GGCAAGGCTTGTGCTGCTGT+TGG | 0.460166 | 3_2:+62585242 | Msa0416020:CDS |
| GACAAGTCTAGGGTTGGAAG+AGG | 0.461864 | 3_2:+62586111 | Msa0416020:CDS |
| GGAAGTGGACAAGTAGTAGA+TGG | 0.465008 | 3_2:+62590216 | Msa0416020:CDS |
| ATAAATAGCTCCAAATAGAA+AGG | 0.465415 | 3_2:+62590554 | Msa0416020:three_prime_UTR |
| GTGGAGAGAAACAGGGATGA+AGG | 0.465559 | 3_2:-62584476 | None:intergenic |
| CTGTTCGTTGGCTTGCACCT+TGG | 0.468448 | 3_2:+62588979 | Msa0416020:CDS |
| GATGGAGCACGATTTGGATT+AGG | 0.469235 | 3_2:+62589483 | Msa0416020:CDS |
| TTGGCAATACGAAGTGGGAA+TGG | 0.470100 | 3_2:+62587891 | Msa0416020:CDS |
| TCAAGTAGTTAGGTCTTTGT+GGG | 0.471554 | 3_2:-62590259 | None:intergenic |
| CGAGATGGCTGTTGCCGCTA+GGG | 0.472977 | 3_2:+62586607 | Msa0416020:CDS |
| TCTGTTCATGCTGCTGATGC+CGG | 0.473603 | 3_2:+62586159 | Msa0416020:CDS |
| TGAAATACCTGAGCTACTTA+AGG | 0.475896 | 3_2:+62588133 | Msa0416020:CDS |
| CAACTGCTAATCTTCCATCT+TGG | 0.478451 | 3_2:-62584724 | None:intergenic |
| GTATTCACCTTAAGTAGCTC+AGG | 0.479835 | 3_2:-62588140 | None:intergenic |
| ATCTTCTGTGACAATGGAAT+CGG | 0.485571 | 3_2:-62589155 | None:intergenic |
| TATTTCTTCGTCAAGTCGAC+AGG | 0.492040 | 3_2:+62589194 | Msa0416020:CDS |
| AATCATCATAAGTAGCCATA+AGG | 0.493336 | 3_2:-62585274 | None:intergenic |
| TGTTGGACAAAGCAGCCTTA+TGG | 0.495426 | 3_2:+62585259 | Msa0416020:CDS |
| TACAATATTCAATTGAGAGA+AGG | 0.495583 | 3_2:+62590390 | Msa0416020:three_prime_UTR |
| ATAGTATTAGTGACGATTTG+CGG | 0.497386 | 3_2:+62588713 | Msa0416020:CDS |
| ATCCCTGTTCTAGGTCATGC+TGG | 0.499422 | 3_2:+62588336 | Msa0416020:CDS |
| TTCATGATCTTCTGTGACAA+TGG | 0.502299 | 3_2:-62589161 | None:intergenic |
| GCGAGATGGCTGTTGCCGCT+AGG | 0.503311 | 3_2:+62586606 | Msa0416020:CDS |
| GTTCGCCATCTTCGGTTTGG+TGG | 0.504248 | 3_2:-62584495 | None:intergenic |
| AATCAGAAACAAACCTCGTA+TGG | 0.504586 | 3_2:-62585613 | None:intergenic |
| TTGGTTTCATCAGGTGCTGT+CGG | 0.505796 | 3_2:+62584911 | Msa0416020:CDS |
| GGGTACCAATACGCTGTCCT+TGG | 0.507124 | 3_2:-62586532 | None:intergenic |
| TGGCAATACGAAGTGGGAAT+GGG | 0.507240 | 3_2:+62587892 | Msa0416020:CDS |
| AGGCCGTGTCTTCGGAAGAA+AGG | 0.510241 | 3_2:+62586759 | Msa0416020:intron |
| ATTCTCCAAGGACAGCGTAT+TGG | 0.512269 | 3_2:+62586527 | Msa0416020:CDS |
| TGCAGGCTTCTCAAAGGAAG+TGG | 0.512350 | 3_2:+62590201 | Msa0416020:intron |
| CTGTCGGCCTCGGTCGACAA+AGG | 0.513517 | 3_2:+62584927 | Msa0416020:CDS |
| TCTCTCCACCAAACCGAAGA+TGG | 0.513853 | 3_2:+62584490 | Msa0416020:exon |
| TTTGGAGACAAGTCTAGGGT+TGG | 0.514543 | 3_2:+62586105 | Msa0416020:CDS |
| TTTGATAGTGGATCACTTGG+AGG | 0.515358 | 3_2:-62586036 | None:intergenic |
| TCCATAAAGATGCACATAAG+TGG | 0.515951 | 3_2:+62586558 | Msa0416020:CDS |
| CATACGAATTATTGCAAACA+TGG | 0.516132 | 3_2:+62587059 | Msa0416020:CDS |
| TATGTGCATCTTTATGGAAG+AGG | 0.518848 | 3_2:-62586553 | None:intergenic |
| AGGATTTGGTAGAGAAAGGC+TGG | 0.520318 | 3_2:+62588686 | Msa0416020:CDS |
| TAAATAGCTCCAAATAGAAA+GGG | 0.522122 | 3_2:+62590555 | Msa0416020:three_prime_UTR |
| ACAATATTCAATTGAGAGAA+GGG | 0.523371 | 3_2:+62590391 | Msa0416020:three_prime_UTR |
| TGAACCAACAGTATCAGGTA+TGG | 0.525984 | 3_2:-62588081 | None:intergenic |
| ACAGAAAATTGATTCAAAGT+AGG | 0.529036 | 3_2:+62584957 | Msa0416020:CDS |
| GACAAAATCTCTACAAGGGT+CGG | 0.530217 | 3_2:-62584519 | None:intergenic |
| CCAATTTCCTAATGTTGGGA+AGG | 0.531730 | 3_2:-62590477 | None:intergenic |
| TCGCCCTGATGCATTGGTAC+AGG | 0.531885 | 3_2:+62587532 | Msa0416020:CDS |
| GTTCAACTTGTGGCTTCTGA+AGG | 0.535455 | 3_2:-62585214 | None:intergenic |
| ACAAGTCTAGGGTTGGAAGA+GGG | 0.535997 | 3_2:+62586112 | Msa0416020:CDS |
| TTTCCTTTCTTCCGAAGACA+CGG | 0.536247 | 3_2:-62586762 | None:intergenic |
| GCTGGATGATGTAATTGATC+TGG | 0.537357 | 3_2:+62588260 | Msa0416020:intron |
| GAATTCCTGTTATCATTACC+AGG | 0.538039 | 3_2:+62586181 | Msa0416020:CDS |
| TAAATCTGCTAATTTGGAGA+TGG | 0.538816 | 3_2:+62588501 | Msa0416020:CDS |
| AAGTCTAGGGTTGGAAGAGG+GGG | 0.539406 | 3_2:+62586114 | Msa0416020:CDS |
| GGGAATGGGCTTCTCTTGAA+AGG | 0.542564 | 3_2:+62587906 | Msa0416020:CDS |
| GCATGAAGCGACGGCAGGCA+AGG | 0.543417 | 3_2:+62590301 | Msa0416020:three_prime_UTR |
| TTGCCTGCCGTCGCTTCATG+CGG | 0.545263 | 3_2:-62590299 | None:intergenic |
| GCTGTTGTTACTCGCCAAGA+TGG | 0.546330 | 3_2:+62584710 | Msa0416020:CDS |
| GCTATTTATTTGAACAACTG+TGG | 0.547754 | 3_2:-62590540 | None:intergenic |
| ATCATATAAATCTTTATGGA+AGG | 0.547903 | 3_2:+62589032 | Msa0416020:CDS |
| GCACAAGCAGGATTCATGCT+CGG | 0.548409 | 3_2:+62589615 | Msa0416020:CDS |
| ACATCATGAGTACTGTTCGT+TGG | 0.551298 | 3_2:+62588967 | Msa0416020:CDS |
| GTTGTTGCTGCACAAGAAGC+AGG | 0.557805 | 3_2:+62586857 | Msa0416020:CDS |
| ATTAGGGGCACTATGTGAGC+AGG | 0.558845 | 3_2:+62584751 | Msa0416020:CDS |
| ATGTGCATCTTTATGGAAGA+GGG | 0.558884 | 3_2:-62586552 | None:intergenic |
| CAAGTCTAGGGTTGGAAGAG+GGG | 0.559526 | 3_2:+62586113 | Msa0416020:CDS |
| AGTTAGGTCTTTGTGGGTGT+AGG | 0.560284 | 3_2:-62590253 | None:intergenic |
| ACAAGTTGAACTTGATGGCA+AGG | 0.561360 | 3_2:+62585226 | Msa0416020:CDS |
| TGAAAATCCGCATGAAGCGA+CGG | 0.563909 | 3_2:+62590292 | Msa0416020:three_prime_UTR |
| TGTTAAGCGCATAATCATCA+AGG | 0.564458 | 3_2:+62584547 | Msa0416020:CDS |
| AGTGACGATTTGCGGTCGGA+AGG | 0.565083 | 3_2:+62588721 | Msa0416020:CDS |
| TCTTTGACAAAATCTCTACA+AGG | 0.569118 | 3_2:-62584524 | None:intergenic |
| AATCCGCATGAAGCGACGGC+AGG | 0.569163 | 3_2:+62590296 | Msa0416020:three_prime_UTR |
| AGAGGTTGATGTACGCGAGA+TGG | 0.572314 | 3_2:+62586592 | Msa0416020:CDS |
| TGCCAATGCAGGCTTCTCAA+AGG | 0.574998 | 3_2:+62590195 | Msa0416020:intron |
| TAAAACCAGCCTAGCAACCA+AGG | 0.575939 | 3_2:-62586891 | None:intergenic |
| TTGATAGTGGATCACTTGGA+GGG | 0.578228 | 3_2:-62586035 | None:intergenic |
| ACCATGGCATTGCATCCTGA+TGG | 0.580281 | 3_2:-62588559 | None:intergenic |
| GGCTTGCACCTTGGAAATCG+TGG | 0.584787 | 3_2:+62588988 | Msa0416020:CDS |
| GTAGGTGTTACTTTATATGG+AGG | 0.588299 | 3_2:+62588899 | Msa0416020:intron |
| CCATAAAGATGCACATAAGT+GGG | 0.592742 | 3_2:+62586559 | Msa0416020:CDS |
| TGATGTAATGAACGAGCAAG+TGG | 0.593696 | 3_2:-62588950 | None:intergenic |
| TAATTCGTATGTTGTTGGCA+AGG | 0.595682 | 3_2:-62587047 | None:intergenic |
| AATCACGTGAGAAAGAGATC+AGG | 0.595752 | 3_2:+62586816 | Msa0416020:CDS |
| TTGCCATCAAGTTCAACTTG+TGG | 0.596653 | 3_2:-62585224 | None:intergenic |
| ACTTATTCACACATACATCA+AGG | 0.602298 | 3_2:+62586059 | Msa0416020:CDS |
| ATCTAAGCCTTTGTCGACCG+AGG | 0.602507 | 3_2:-62584934 | None:intergenic |
| ATTCATGCTCGGGGTCCAGT+AGG | 0.607413 | 3_2:+62589626 | Msa0416020:CDS |
| ATTCCCACTTCGTATTGCCA+AGG | 0.607702 | 3_2:-62587889 | None:intergenic |
| GCTTCTCTTGAAAGGAGGCA+AGG | 0.610911 | 3_2:+62587914 | Msa0416020:CDS |
| TAAGTGGGTCCCTTCAAAAG+AGG | 0.611546 | 3_2:+62586574 | Msa0416020:CDS |
| ATTAGCAGTTGGAAAATTAG+GGG | 0.611624 | 3_2:+62584736 | Msa0416020:CDS |
| AACATCATCCACGATTTCCA+AGG | 0.613354 | 3_2:-62588996 | None:intergenic |
| AATCTCACTAAAATTCTCCA+AGG | 0.618787 | 3_2:+62586515 | Msa0416020:CDS |
| AGGTTGGAATAAGCACAAGC+AGG | 0.619676 | 3_2:+62589603 | Msa0416020:intron |
| CGGTTTGGTGGAGAGAAACA+GGG | 0.620598 | 3_2:-62584483 | None:intergenic |
| ATGGATTGTTAACAACCAGA+TGG | 0.621962 | 3_2:+62589654 | Msa0416020:CDS |
| CTTCCTTGGCAATACGAAGT+GGG | 0.627539 | 3_2:+62587886 | Msa0416020:CDS |
| GCTTCCTTGGCAATACGAAG+TGG | 0.630392 | 3_2:+62587885 | Msa0416020:CDS |
| TCCATCAGGATGCAATGCCA+TGG | 0.631095 | 3_2:+62588558 | Msa0416020:CDS |
| TATTAGTGACGATTTGCGGT+CGG | 0.633470 | 3_2:+62588717 | Msa0416020:CDS |
| GAAGCCATACCTGATACTGT+TGG | 0.635151 | 3_2:+62588077 | Msa0416020:CDS |
| ATAATTAAAAGAACTCCCAA+AGG | 0.641890 | 3_2:-62587500 | None:intergenic |
| GCAAACATGGAAGATCCGAT+TGG | 0.643252 | 3_2:+62587072 | Msa0416020:CDS |
| AATGGGCTTCTCTTGAAAGG+AGG | 0.649708 | 3_2:+62587909 | Msa0416020:CDS |
| CAAGATGGAAGATTAGCAGT+TGG | 0.654529 | 3_2:+62584725 | Msa0416020:CDS |
| GCTAGTACAAGATTCAGCGA+TGG | 0.668586 | 3_2:+62589465 | Msa0416020:CDS |
| CCGCTAGGGACTGTTCCAGA+CGG | 0.668873 | 3_2:+62586621 | Msa0416020:CDS |
| CTTTGACAAAATCTCTACAA+GGG | 0.672180 | 3_2:-62584523 | None:intergenic |
| TACTAGGAAAGCTCCATACG+AGG | 0.688400 | 3_2:+62585600 | Msa0416020:CDS |
| TTACCTGTACCAATGCATCA+GGG | 0.694781 | 3_2:-62587535 | None:intergenic |
| ACAAGCAGGATTCATGCTCG+GGG | 0.697980 | 3_2:+62589617 | Msa0416020:CDS |
| ATTGATCTGGTGATTCCAAG+AGG | 0.700847 | 3_2:+62588273 | Msa0416020:CDS |
| TCTCTTGAAAGGAGGCAAGG+AGG | 0.705490 | 3_2:+62587917 | Msa0416020:CDS |
| TACCAGCATGACCTAGAACA+GGG | 0.710800 | 3_2:-62588338 | None:intergenic |
| ACGATTTGGATTAGGCGCAG+AGG | 0.714176 | 3_2:+62589491 | Msa0416020:CDS |
| CCGTCTGGAACAGTCCCTAG+CGG | 0.716534 | 3_2:-62586621 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATAATAGAAGAAAAAT+TGG | + | chr3_2:62584808-62584827 | Msa0416020:intron | 10.0% |
| !! | AAAAGAGAAAAATATAATTT+GGG | - | chr3_2:62585789-62585808 | None:intergenic | 10.0% |
| !! | TGTGTTAAAATAAAATAAAA+CGG | - | chr3_2:62586243-62586262 | None:intergenic | 10.0% |
| !!! | AATATATTTCTAATTGAAAA+TGG | - | chr3_2:62586278-62586297 | None:intergenic | 10.0% |
| !! | AATTAGAAATATATTAGTTA+GGG | + | chr3_2:62586283-62586302 | Msa0416020:intron | 10.0% |
| !!! | AATTCATTTTATCTAAAATA+AGG | - | chr3_2:62587709-62587728 | None:intergenic | 10.0% |
| !!! | ATTTATGCATTTTTTTTTTT+TGG | + | chr3_2:62588019-62588038 | Msa0416020:intron | 10.0% |
| !!! | TTTATGCATTTTTTTTTTTT+GGG | + | chr3_2:62588020-62588039 | Msa0416020:intron | 10.0% |
| !! | ATTATAAAGTTTATATTGTA+AGG | + | chr3_2:62588844-62588863 | Msa0416020:intron | 10.0% |
| !! | ATTTATATATGAATAATGTT+TGG | + | chr3_2:62589412-62589431 | Msa0416020:intron | 10.0% |
| !!! | GTTAATTTATCATTATATTT+TGG | + | chr3_2:62589572-62589591 | Msa0416020:intron | 10.0% |
| !!! | TTTATTTTGATTCATTTTCA+AGG | + | chr3_2:62584679-62584698 | Msa0416020:intron | 15.0% |
| !!! | AAACACTTTGTTATAAATAT+GGG | + | chr3_2:62585003-62585022 | Msa0416020:intron | 15.0% |
| !! | CAAAAGAGAAAAATATAATT+TGG | - | chr3_2:62585790-62585809 | None:intergenic | 15.0% |
| !!! | AACACTTTTAAGTATTTTTT+AGG | - | chr3_2:62585886-62585905 | None:intergenic | 15.0% |
| !!! | TTATTTTAACACATTTTTTG+TGG | + | chr3_2:62586250-62586269 | Msa0416020:intron | 15.0% |
| !! | CAATTAGAAATATATTAGTT+AGG | + | chr3_2:62586282-62586301 | Msa0416020:intron | 15.0% |
| !!! | AATTTTCAAAAAATGAGAAT+CGG | - | chr3_2:62586447-62586466 | None:intergenic | 15.0% |
| !! | TTGTCAAATTATCATTTAAT+TGG | - | chr3_2:62587981-62588000 | None:intergenic | 15.0% |
| !! | ATTCATCATATAAATCTTTA+TGG | + | chr3_2:62589028-62589047 | Msa0416020:CDS | 15.0% |
| !!! | CTTTTTTTACAATGTTATTT+AGG | + | chr3_2:62589305-62589324 | Msa0416020:intron | 15.0% |
| !! | TAAAAAGAAAAATGTTTGTT+GGG | - | chr3_2:62589348-62589367 | None:intergenic | 15.0% |
| !! | TTAAAAAGAAAAATGTTTGT+TGG | - | chr3_2:62589349-62589368 | None:intergenic | 15.0% |
| !! | ATGCTATAATTACTTAATTA+TGG | - | chr3_2:62589889-62589908 | None:intergenic | 15.0% |
| !! | TAATTAAGTAATTATAGCAT+TGG | + | chr3_2:62589889-62589908 | Msa0416020:intron | 15.0% |
| !!! | TTGATTGTAATTTATTTTCT+TGG | + | chr3_2:62590332-62590351 | Msa0416020:three_prime_UTR | 15.0% |
| !!! | TGATTGTAATTTATTTTCTT+GGG | + | chr3_2:62590333-62590352 | Msa0416020:three_prime_UTR | 15.0% |
| !!! | TCTGTCATTTATTTTCAAAA+GGG | - | chr3_2:62584856-62584875 | None:intergenic | 20.0% |
| !!! | ATCTGTCATTTATTTTCAAA+AGG | - | chr3_2:62584857-62584876 | None:intergenic | 20.0% |
| !! | TGAAAATAAATGACAGATTA+AGG | + | chr3_2:62584859-62584878 | Msa0416020:intron | 20.0% |
| !!! | CAAACACTTTGTTATAAATA+TGG | + | chr3_2:62585002-62585021 | Msa0416020:intron | 20.0% |
| !!! | AACACTTTGTTATAAATATG+GGG | + | chr3_2:62585004-62585023 | Msa0416020:intron | 20.0% |
| !!! | TTAATTGATTTAGCATCTTA+TGG | + | chr3_2:62585327-62585346 | Msa0416020:intron | 20.0% |
| !! | TTACATCAACTTATAAACAA+TGG | - | chr3_2:62585357-62585376 | None:intergenic | 20.0% |
| !!! | TTCTTGTCAATTTCATTTTT+AGG | + | chr3_2:62585379-62585398 | Msa0416020:intron | 20.0% |
| !! | AACAAAGCATAATTTAAACT+TGG | + | chr3_2:62585640-62585659 | Msa0416020:intron | 20.0% |
| !! | TTGTGAAGAAAAAAAATTAG+TGG | + | chr3_2:62585689-62585708 | Msa0416020:intron | 20.0% |
| !!! | TTTTTTTGCTGTTATGATAT+AGG | + | chr3_2:62585740-62585759 | Msa0416020:intron | 20.0% |
| !! | TCTTTATACTGATCATTATA+TGG | + | chr3_2:62585829-62585848 | Msa0416020:intron | 20.0% |
| !!! | CATCAAAATGAAATTACTTT+TGG | + | chr3_2:62586087-62586106 | Msa0416020:CDS | 20.0% |
| !!! | GATTCTCATTTTTTGAAAAT+TGG | + | chr3_2:62586446-62586465 | Msa0416020:intron | 20.0% |
| !!! | TTTTATTTTTCTTCTTTCAG+TGG | + | chr3_2:62586479-62586498 | Msa0416020:intron | 20.0% |
| !! | GAAGAACAAAAAATATGAAA+AGG | - | chr3_2:62587567-62587586 | None:intergenic | 20.0% |
| !! | ATGATCAATCAATCTAAAAA+TGG | - | chr3_2:62587794-62587813 | None:intergenic | 20.0% |
| !!! | ATTTTATTGTCAAAATCAGA+TGG | + | chr3_2:62588457-62588476 | Msa0416020:intron | 20.0% |
| !!! | TTTTATTGTCAAAATCAGAT+GGG | + | chr3_2:62588458-62588477 | Msa0416020:intron | 20.0% |
| !! | AAATAACATATATTAAGGCA+TGG | - | chr3_2:62588631-62588650 | None:intergenic | 20.0% |
| !! | TTATTTAAATTTGAACTCCT+AGG | + | chr3_2:62588645-62588664 | Msa0416020:intron | 20.0% |
| !!! | AGATGATTTAAAACTTATGT+AGG | + | chr3_2:62588881-62588900 | Msa0416020:intron | 20.0% |
| !! | ATCATATAAATCTTTATGGA+AGG | + | chr3_2:62589032-62589051 | Msa0416020:CDS | 20.0% |
| !!! | ATTATATTTTGGGCTTTAAT+AGG | + | chr3_2:62589583-62589602 | Msa0416020:intron | 20.0% |
| !!! | AATGTTTCTAAAGTATTAGA+AGG | - | chr3_2:62589694-62589713 | None:intergenic | 20.0% |
| !! | TCAATAAATAAGCTCAAATA+AGG | + | chr3_2:62590107-62590126 | Msa0416020:intron | 20.0% |
| !!! | AATTTTTTTCCCTTTCTATT+TGG | - | chr3_2:62590567-62590586 | None:intergenic | 20.0% |
| !!! | TTTTGATTCATTTTCAAGGT+TGG | + | chr3_2:62584683-62584702 | Msa0416020:intron | 25.0% |
| ! | ATTAAGGAGCTAAATATTCT+TGG | + | chr3_2:62584875-62584894 | Msa0416020:CDS | 25.0% |
| !! | TCTTGGTTATGAAGTTATTT+TGG | + | chr3_2:62584892-62584911 | Msa0416020:CDS | 25.0% |
| !! | ACAGAAAATTGATTCAAAGT+AGG | + | chr3_2:62584957-62584976 | Msa0416020:CDS | 25.0% |
| !! | ACACTTTGTTATAAATATGG+GGG | + | chr3_2:62585005-62585024 | Msa0416020:intron | 25.0% |
| !!! | TTATGATGATTTGTTTAGTC+AGG | + | chr3_2:62585286-62585305 | Msa0416020:CDS | 25.0% |
| !!! | AAAGTTGCTTTCTAAAATCT+TGG | - | chr3_2:62585513-62585532 | None:intergenic | 25.0% |
| ! | AAAGCATAATTTAAACTTGG+AGG | + | chr3_2:62585643-62585662 | Msa0416020:intron | 25.0% |
| !!! | TTTTTTCTGTCAAACAACTA+AGG | + | chr3_2:62587200-62587219 | Msa0416020:intron | 25.0% |
| !! | GATTGATTCAGTTTAAAAAG+CGG | - | chr3_2:62587226-62587245 | None:intergenic | 25.0% |
| ! | ATAATTAAAAGAACTCCCAA+AGG | - | chr3_2:62587503-62587522 | None:intergenic | 25.0% |
| ! | TCATTTATAAATCAATCGAG+AGG | - | chr3_2:62587589-62587608 | None:intergenic | 25.0% |
| !!! | TAAATGATTCTTTTTCAGCT+CGG | + | chr3_2:62587602-62587621 | Msa0416020:intron | 25.0% |
| ! | ATTACCTGAACATTTAGATA+GGG | - | chr3_2:62588053-62588072 | None:intergenic | 25.0% |
| ! | AATTACCTGAACATTTAGAT+AGG | - | chr3_2:62588054-62588073 | None:intergenic | 25.0% |
| ! | TGCAAGTATATTAAGCTTAA+AGG | - | chr3_2:62588367-62588386 | None:intergenic | 25.0% |
| !! | TGTTGATAAATCTGCTAATT+TGG | + | chr3_2:62588495-62588514 | Msa0416020:CDS | 25.0% |
| !! | ATATTGTAAGGTTTCTGAAA+TGG | + | chr3_2:62588856-62588875 | Msa0416020:intron | 25.0% |
| !!! | TATGTAGGTGTTACTTTATA+TGG | + | chr3_2:62588896-62588915 | Msa0416020:intron | 25.0% |
| ! | CGATGTAATATTTGATTAGA+GGG | - | chr3_2:62589254-62589273 | None:intergenic | 25.0% |
| ! | TCGATGTAATATTTGATTAG+AGG | - | chr3_2:62589255-62589274 | None:intergenic | 25.0% |
| ! | TCTAATCAAATATTACATCG+AGG | + | chr3_2:62589254-62589273 | Msa0416020:intron | 25.0% |
| ! | AAAAGCTACTGATGATAAAA+AGG | - | chr3_2:62589538-62589557 | None:intergenic | 25.0% |
| ! | TCAATAAGAAAGAAACAGAA+AGG | - | chr3_2:62589726-62589745 | None:intergenic | 25.0% |
| ! | TGTTTCTTTCTTATTGAACT+AGG | + | chr3_2:62589729-62589748 | Msa0416020:intron | 25.0% |
| ! | AATTATGGTTTATCCAAACA+AGG | - | chr3_2:62589874-62589893 | None:intergenic | 25.0% |
| ! | CAGTTTATATACCAAATAGT+TGG | - | chr3_2:62590157-62590176 | None:intergenic | 25.0% |
| ! | TACAATATTCAATTGAGAGA+AGG | + | chr3_2:62590390-62590409 | Msa0416020:three_prime_UTR | 25.0% |
| ! | ACAATATTCAATTGAGAGAA+GGG | + | chr3_2:62590391-62590410 | Msa0416020:three_prime_UTR | 25.0% |
| ! | ATAAATAGCTCCAAATAGAA+AGG | + | chr3_2:62590554-62590573 | Msa0416020:three_prime_UTR | 25.0% |
| ! | TAAATAGCTCCAAATAGAAA+GGG | + | chr3_2:62590555-62590574 | Msa0416020:three_prime_UTR | 25.0% |
| CTTTGACAAAATCTCTACAA+GGG | - | chr3_2:62584526-62584545 | None:intergenic | 30.0% | |
| TCTTTGACAAAATCTCTACA+AGG | - | chr3_2:62584527-62584546 | None:intergenic | 30.0% | |
| TCACAAAACTTCAATACCAA+TGG | + | chr3_2:62584632-62584651 | Msa0416020:intron | 30.0% | |
| ATACCAATGGATAATGCAAA+TGG | + | chr3_2:62584645-62584664 | Msa0416020:intron | 30.0% | |
| AGATTAGCAGTTGGAAAATT+AGG | + | chr3_2:62584734-62584753 | Msa0416020:CDS | 30.0% | |
| GATTAGCAGTTGGAAAATTA+GGG | + | chr3_2:62584735-62584754 | Msa0416020:CDS | 30.0% | |
| ATTAGCAGTTGGAAAATTAG+GGG | + | chr3_2:62584736-62584755 | Msa0416020:CDS | 30.0% | |
| !!! | GAAGTTATTTTGGTTTCATC+AGG | + | chr3_2:62584902-62584921 | Msa0416020:CDS | 30.0% |
| !! | AACAACGATGATTGCTATTT+AGG | - | chr3_2:62585051-62585070 | None:intergenic | 30.0% |
| AATCATCATAAGTAGCCATA+AGG | - | chr3_2:62585277-62585296 | None:intergenic | 30.0% | |
| ! | TCTTTTGATAAATGTGTCCA+AGG | + | chr3_2:62585803-62585822 | Msa0416020:intron | 30.0% |
| ! | CTTTTGATAAATGTGTCCAA+GGG | + | chr3_2:62585804-62585823 | Msa0416020:intron | 30.0% |
| !! | AAGATCTGCTTTTAATTCCA+AGG | - | chr3_2:62585977-62585996 | None:intergenic | 30.0% |
| ! | ATTTTGTTGAGTGATGTAGA+TGG | + | chr3_2:62586000-62586019 | Msa0416020:CDS | 30.0% |
| GATGTAGATGGTCTTTATAA+TGG | + | chr3_2:62586012-62586031 | Msa0416020:CDS | 30.0% | |
| !! | GTGTGAATAAGTTTTGATAG+TGG | - | chr3_2:62586051-62586070 | None:intergenic | 30.0% |
| ACTTATTCACACATACATCA+AGG | + | chr3_2:62586059-62586078 | Msa0416020:CDS | 30.0% | |
| ! | ATGAACAGAAGCTTTTACTT+TGG | - | chr3_2:62586148-62586167 | None:intergenic | 30.0% |
| TAATGCATCAACAAAGGAAA+GGG | - | chr3_2:62586365-62586384 | None:intergenic | 30.0% | |
| TCTTACTAATGCATCAACAA+AGG | - | chr3_2:62586371-62586390 | None:intergenic | 30.0% | |
| ! | AATGGATTTCATAGTGTTCT+TGG | - | chr3_2:62586404-62586423 | None:intergenic | 30.0% |
| GGAGTATGTAACATACATAA+TGG | - | chr3_2:62586422-62586441 | None:intergenic | 30.0% | |
| TTCAAAAAATGAGAATCGGA+TGG | - | chr3_2:62586443-62586462 | None:intergenic | 30.0% | |
| AATCTCACTAAAATTCTCCA+AGG | + | chr3_2:62586515-62586534 | Msa0416020:CDS | 30.0% | |
| AACAGTTAGAAAATGTCTCT+CGG | + | chr3_2:62586666-62586685 | Msa0416020:intron | 30.0% | |
| ! | ATTAGGAGATTAGCATGTTT+TGG | - | chr3_2:62586729-62586748 | None:intergenic | 30.0% |
| TGCAATAATTCGTATGTTGT+TGG | - | chr3_2:62587055-62587074 | None:intergenic | 30.0% | |
| CATACGAATTATTGCAAACA+TGG | + | chr3_2:62587059-62587078 | Msa0416020:CDS | 30.0% | |
| AGTTTGCAAACAGATTACTA+AGG | - | chr3_2:62587176-62587195 | None:intergenic | 30.0% | |
| GTAAACTGTATCTACTAGTA+TGG | - | chr3_2:62587284-62587303 | None:intergenic | 30.0% | |
| CTAGTAGATACAGTTTACAA+AGG | + | chr3_2:62587286-62587305 | Msa0416020:intron | 30.0% | |
| CAATACATGACTTTATGACA+TGG | - | chr3_2:62587357-62587376 | None:intergenic | 30.0% | |
| ! | ATCAACACTATTGATTGTAC+TGG | + | chr3_2:62587389-62587408 | Msa0416020:intron | 30.0% |
| !! | TTGATTGTACTGGTTAATGA+TGG | + | chr3_2:62587399-62587418 | Msa0416020:intron | 30.0% |
| !!! | CTTTTTATTTAGCTTGCAGA+GGG | + | chr3_2:62587452-62587471 | Msa0416020:intron | 30.0% |
| !!! | TTTTTATTTAGCTTGCAGAG+GGG | + | chr3_2:62587453-62587472 | Msa0416020:intron | 30.0% |
| AAACTGAACTTTGTGCAAAA+TGG | - | chr3_2:62587958-62587977 | None:intergenic | 30.0% | |
| !! | ACTGTTGGTTCAAAACTTAT+TGG | + | chr3_2:62588092-62588111 | Msa0416020:CDS | 30.0% |
| CAACAGTGCAAATTAATTTC+TGG | + | chr3_2:62588162-62588181 | Msa0416020:intron | 30.0% | |
| !! | CTTTCTATTTGTTTTTCAGC+TGG | + | chr3_2:62588242-62588261 | Msa0416020:intron | 30.0% |
| TAAATCTGCTAATTTGGAGA+TGG | + | chr3_2:62588501-62588520 | Msa0416020:CDS | 30.0% | |
| ACTTCTTGTTCATAAGGATT+TGG | + | chr3_2:62588672-62588691 | Msa0416020:CDS | 30.0% | |
| ATAGTATTAGTGACGATTTG+CGG | + | chr3_2:62588713-62588732 | Msa0416020:CDS | 30.0% | |
| ATATGAAGAGAATTATCTGC+TGG | + | chr3_2:62588767-62588786 | Msa0416020:intron | 30.0% | |
| TGATCTGTGATCTCAAAAAA+GGG | - | chr3_2:62589380-62589399 | None:intergenic | 30.0% | |
| ATGATCTGTGATCTCAAAAA+AGG | - | chr3_2:62589381-62589400 | None:intergenic | 30.0% | |
| !! | GATCACAGATCATTTTAAAG+TGG | + | chr3_2:62589388-62589407 | Msa0416020:intron | 30.0% |
| !! | TATTTTGGGCTTTAATAGGT+TGG | + | chr3_2:62589587-62589606 | Msa0416020:intron | 30.0% |
| ! | TAAAGTATTAGAAGGAGCAT+CGG | - | chr3_2:62589686-62589705 | None:intergenic | 30.0% |
| TAGCTAATCACAATTATACG+CGG | + | chr3_2:62589800-62589819 | Msa0416020:intron | 30.0% | |
| TCAACGTTTATGACCATAAT+AGG | + | chr3_2:62589848-62589867 | Msa0416020:intron | 30.0% | |
| !! | CTTATTTCTATAAGCTCTCT+TGG | - | chr3_2:62590016-62590035 | None:intergenic | 30.0% |
| ! | CCAAATAGTTGGTGTTTATA+GGG | - | chr3_2:62590146-62590165 | None:intergenic | 30.0% |
| ! | ACCAAATAGTTGGTGTTTAT+AGG | - | chr3_2:62590147-62590166 | None:intergenic | 30.0% |
| TTGGTATATAAACTGATGCA+TGG | + | chr3_2:62590162-62590181 | Msa0416020:intron | 30.0% | |
| GTAGCAAAAATCAAGTAGTT+AGG | - | chr3_2:62590272-62590291 | None:intergenic | 30.0% | |
| !! | TTTTTGTTGTGTTCAGAGTT+AGG | + | chr3_2:62590358-62590377 | Msa0416020:three_prime_UTR | 30.0% |
| ATCACCAATTTCCTAATGTT+GGG | - | chr3_2:62590484-62590503 | None:intergenic | 30.0% | |
| GCTATTTATTTGAACAACTG+TGG | - | chr3_2:62590543-62590562 | None:intergenic | 30.0% | |
| TGTTAAGCGCATAATCATCA+AGG | + | chr3_2:62584547-62584566 | Msa0416020:CDS | 35.0% | |
| TAGCCATTTGCATTATCCAT+TGG | - | chr3_2:62584651-62584670 | None:intergenic | 35.0% | |
| ATGGATAATGCAAATGGCTA+AGG | + | chr3_2:62584651-62584670 | Msa0416020:intron | 35.0% | |
| AATCAGAAACAAACCTCGTA+TGG | - | chr3_2:62585616-62585635 | None:intergenic | 35.0% | |
| GATCAGTATAAAGAAACCCT+TGG | - | chr3_2:62585823-62585842 | None:intergenic | 35.0% | |
| !!! | GTTACCTACTCATTTTTTGC+AGG | + | chr3_2:62585903-62585922 | Msa0416020:intron | 35.0% |
| GAATCCTGCAAAAAATGAGT+AGG | - | chr3_2:62585910-62585929 | None:intergenic | 35.0% | |
| !!! | CATTTTTTGCAGGATTCTTC+TGG | + | chr3_2:62585913-62585932 | Msa0416020:intron | 35.0% |
| ! | AGGATTCTTCTGGCATATTT+TGG | + | chr3_2:62585923-62585942 | Msa0416020:intron | 35.0% |
| ! | GGATTCTTCTGGCATATTTT+GGG | + | chr3_2:62585924-62585943 | Msa0416020:intron | 35.0% |
| ! | TGACAGTTTATCAGCTTTGT+TGG | + | chr3_2:62585951-62585970 | Msa0416020:CDS | 35.0% |
| !!! | AGTTTTGATAGTGGATCACT+TGG | - | chr3_2:62586042-62586061 | None:intergenic | 35.0% |
| !! | TTACTTTTGGAGACAAGTCT+AGG | + | chr3_2:62586100-62586119 | Msa0416020:CDS | 35.0% |
| !! | TACTTTTGGAGACAAGTCTA+GGG | + | chr3_2:62586101-62586120 | Msa0416020:CDS | 35.0% |
| GGTAATGATAACAGGAATTC+CGG | - | chr3_2:62586181-62586200 | None:intergenic | 35.0% | |
| GAATTCCTGTTATCATTACC+AGG | + | chr3_2:62586181-62586200 | Msa0416020:CDS | 35.0% | |
| AATGCATCAACAAAGGAAAG+GGG | - | chr3_2:62586364-62586383 | None:intergenic | 35.0% | |
| CTAATGCATCAACAAAGGAA+AGG | - | chr3_2:62586366-62586385 | None:intergenic | 35.0% | |
| ATGTGCATCTTTATGGAAGA+GGG | - | chr3_2:62586555-62586574 | None:intergenic | 35.0% | |
| TATGTGCATCTTTATGGAAG+AGG | - | chr3_2:62586556-62586575 | None:intergenic | 35.0% | |
| TCCATAAAGATGCACATAAG+TGG | + | chr3_2:62586558-62586577 | Msa0416020:CDS | 35.0% | |
| CCATAAAGATGCACATAAGT+GGG | + | chr3_2:62586559-62586578 | Msa0416020:CDS | 35.0% | |
| ! | GTACATCAACCTCTTTTGAA+GGG | - | chr3_2:62586586-62586605 | None:intergenic | 35.0% |
| ATCTCCTAATCTTACGTTAC+AGG | + | chr3_2:62586739-62586758 | Msa0416020:intron | 35.0% | |
| CTATATAACTGACAGATCGT+AGG | + | chr3_2:62587024-62587043 | Msa0416020:intron | 35.0% | |
| TAATTCGTATGTTGTTGGCA+AGG | - | chr3_2:62587050-62587069 | None:intergenic | 35.0% | |
| !!! | CGTTTTAAAACTCGACCAAT+CGG | - | chr3_2:62587090-62587109 | None:intergenic | 35.0% |
| !!! | TCGAGTTTTAAAACGAACTG+AGG | + | chr3_2:62587095-62587114 | Msa0416020:CDS | 35.0% |
| CCTCTGCAAGCTAAATAAAA+AGG | - | chr3_2:62587454-62587473 | None:intergenic | 35.0% | |
| !!! | CCTTTTTATTTAGCTTGCAG+AGG | + | chr3_2:62587451-62587470 | Msa0416020:intron | 35.0% |
| ! | CCTTACTTTAGAAAAGCTGT+GGG | + | chr3_2:62587678-62587697 | Msa0416020:intron | 35.0% |
| ATTTGAACAGATAGCTTCCT+TGG | + | chr3_2:62587872-62587891 | Msa0416020:intron | 35.0% | |
| TTGACCCTATCTAAATGTTC+AGG | + | chr3_2:62588046-62588065 | Msa0416020:intron | 35.0% | |
| !!! | AGTTTTGAACCAACAGTATC+AGG | - | chr3_2:62588089-62588108 | None:intergenic | 35.0% |
| TGAAATACCTGAGCTACTTA+AGG | + | chr3_2:62588133-62588152 | Msa0416020:CDS | 35.0% | |
| TGCTCACTTTGAATAGATTG+TGG | + | chr3_2:62588195-62588214 | Msa0416020:intron | 35.0% | |
| TATACTTGCAGTGCTTGATA+TGG | + | chr3_2:62588377-62588396 | Msa0416020:intron | 35.0% | |
| GCAAAAACAGATTATCCATC+AGG | + | chr3_2:62588544-62588563 | Msa0416020:CDS | 35.0% | |
| TCCAACACACTAAATTACCA+TGG | - | chr3_2:62588578-62588597 | None:intergenic | 35.0% | |
| !! | ATGAACAAGAAGTGTTTCCT+AGG | - | chr3_2:62588665-62588684 | None:intergenic | 35.0% |
| GGAAACACTTCTTGTTCATA+AGG | + | chr3_2:62588666-62588685 | Msa0416020:intron | 35.0% | |
| ! | CATAAGGATTTGGTAGAGAA+AGG | + | chr3_2:62588682-62588701 | Msa0416020:CDS | 35.0% |
| !! | GTAGGTGTTACTTTATATGG+AGG | + | chr3_2:62588899-62588918 | Msa0416020:intron | 35.0% |
| ! | TTCAACAGAGAACTTGCTTT+CGG | - | chr3_2:62588926-62588945 | None:intergenic | 35.0% |
| !! | TTGTTGCTATTTCCCCATTA+TGG | + | chr3_2:62589121-62589140 | Msa0416020:intron | 35.0% |
| ATCTTCTGTGACAATGGAAT+CGG | - | chr3_2:62589158-62589177 | None:intergenic | 35.0% | |
| TTCATGATCTTCTGTGACAA+TGG | - | chr3_2:62589164-62589183 | None:intergenic | 35.0% | |
| ! | ATCATCAGTAGCTTTTGCTA+AGG | + | chr3_2:62589542-62589561 | Msa0416020:intron | 35.0% |
| ! | ATGGATTGTTAACAACCAGA+TGG | + | chr3_2:62589654-62589673 | Msa0416020:CDS | 35.0% |
| TATCCAAACAAGGCCTATTA+TGG | - | chr3_2:62589864-62589883 | None:intergenic | 35.0% | |
| TTCTATAAGCTCTCTTGGAT+AGG | - | chr3_2:62590011-62590030 | None:intergenic | 35.0% | |
| AGAGCTATGGAAACATCTTA+TGG | - | chr3_2:62590061-62590080 | None:intergenic | 35.0% | |
| CCCTATAAACACCAACTATT+TGG | + | chr3_2:62590143-62590162 | Msa0416020:intron | 35.0% | |
| GATTATTCATTTGCCAATGC+AGG | + | chr3_2:62590184-62590203 | Msa0416020:intron | 35.0% | |
| TCAAGTAGTTAGGTCTTTGT+GGG | - | chr3_2:62590262-62590281 | None:intergenic | 35.0% | |
| ATCAAGTAGTTAGGTCTTTG+TGG | - | chr3_2:62590263-62590282 | None:intergenic | 35.0% | |
| GATCACCAATTTCCTAATGT+TGG | - | chr3_2:62590485-62590504 | None:intergenic | 35.0% | |
| GACAAAATCTCTACAAGGGT+CGG | - | chr3_2:62584522-62584541 | None:intergenic | 40.0% | |
| CAACTGCTAATCTTCCATCT+TGG | - | chr3_2:62584727-62584746 | None:intergenic | 40.0% | |
| CAAGATGGAAGATTAGCAGT+TGG | + | chr3_2:62584725-62584744 | Msa0416020:CDS | 40.0% | |
| ! | TACATACCGTTTGAAGTGCT+AGG | + | chr3_2:62585102-62585121 | Msa0416020:intron | 40.0% |
| ! | ACATACCGTTTGAAGTGCTA+GGG | + | chr3_2:62585103-62585122 | Msa0416020:intron | 40.0% |
| TATACCCCTAGCACTTCAAA+CGG | - | chr3_2:62585111-62585130 | None:intergenic | 40.0% | |
| ! | AAGCCACAAGTTGAACTTGA+TGG | + | chr3_2:62585221-62585240 | Msa0416020:CDS | 40.0% |
| TTGCCATCAAGTTCAACTTG+TGG | - | chr3_2:62585227-62585246 | None:intergenic | 40.0% | |
| ! | ACAAGTTGAACTTGATGGCA+AGG | + | chr3_2:62585226-62585245 | Msa0416020:CDS | 40.0% |
| !! | TTTATCAGCTTTGTTGGCCT+TGG | + | chr3_2:62585957-62585976 | Msa0416020:CDS | 40.0% |
| !! | TTGATAGTGGATCACTTGGA+GGG | - | chr3_2:62586038-62586057 | None:intergenic | 40.0% |
| !! | TTTGATAGTGGATCACTTGG+AGG | - | chr3_2:62586039-62586058 | None:intergenic | 40.0% |
| AAATAAATCAGCAGTGCACC+TGG | - | chr3_2:62586202-62586221 | None:intergenic | 40.0% | |
| ATGCATCAACAAAGGAAAGG+GGG | - | chr3_2:62586363-62586382 | None:intergenic | 40.0% | |
| CCCACTTATGTGCATCTTTA+TGG | - | chr3_2:62586562-62586581 | None:intergenic | 40.0% | |
| ! | CGTACATCAACCTCTTTTGA+AGG | - | chr3_2:62586587-62586606 | None:intergenic | 40.0% |
| ! | ACTGAAGCTTGGTAATATCC+AGG | - | chr3_2:62586694-62586713 | None:intergenic | 40.0% |
| ACGAACGATATACTGAAGCT+TGG | - | chr3_2:62586705-62586724 | None:intergenic | 40.0% | |
| TTTCCTTTCTTCCGAAGACA+CGG | - | chr3_2:62586765-62586784 | None:intergenic | 40.0% | |
| AATCACGTGAGAAAGAGATC+AGG | + | chr3_2:62586816-62586835 | Msa0416020:CDS | 40.0% | |
| AGCAGGATACGAAAAATCCT+TGG | + | chr3_2:62586874-62586893 | Msa0416020:CDS | 40.0% | |
| ACGAAAAATCCTTGGTTGCT+AGG | + | chr3_2:62586882-62586901 | Msa0416020:CDS | 40.0% | |
| !!! | GCTGGTTTTAAAGAGTGAGA+AGG | + | chr3_2:62586904-62586923 | Msa0416020:CDS | 40.0% |
| GAGAAAACGTCATCTCCTTT+GGG | + | chr3_2:62587485-62587504 | Msa0416020:CDS | 40.0% | |
| TTACCTGTACCAATGCATCA+GGG | - | chr3_2:62587538-62587557 | None:intergenic | 40.0% | |
| TTTACCTGTACCAATGCATC+AGG | - | chr3_2:62587539-62587558 | None:intergenic | 40.0% | |
| ! | GCCTTACTTTAGAAAAGCTG+TGG | + | chr3_2:62587677-62587696 | Msa0416020:intron | 40.0% |
| !!! | CCCACAGCTTTTCTAAAGTA+AGG | - | chr3_2:62587681-62587700 | None:intergenic | 40.0% |
| ! | ACTTTAGAAAAGCTGTGGGT+CGG | + | chr3_2:62587682-62587701 | Msa0416020:intron | 40.0% |
| TGAACCAACAGTATCAGGTA+TGG | - | chr3_2:62588084-62588103 | None:intergenic | 40.0% | |
| GTATTCACCTTAAGTAGCTC+AGG | - | chr3_2:62588143-62588162 | None:intergenic | 40.0% | |
| GCTGGATGATGTAATTGATC+TGG | + | chr3_2:62588260-62588279 | Msa0416020:intron | 40.0% | |
| ATTGATCTGGTGATTCCAAG+AGG | + | chr3_2:62588273-62588292 | Msa0416020:CDS | 40.0% | |
| ACAAGTTTATTGCTGCCTCT+TGG | - | chr3_2:62588291-62588310 | None:intergenic | 40.0% | |
| TTGCAGTGCTTGATATGGTA+TGG | + | chr3_2:62588382-62588401 | Msa0416020:intron | 40.0% | |
| GCCATGGTAATTTAGTGTGT+TGG | + | chr3_2:62588574-62588593 | Msa0416020:intron | 40.0% | |
| TATTAGTGACGATTTGCGGT+CGG | + | chr3_2:62588717-62588736 | Msa0416020:CDS | 40.0% | |
| TGATGTAATGAACGAGCAAG+TGG | - | chr3_2:62588953-62588972 | None:intergenic | 40.0% | |
| ! | ACATCATGAGTACTGTTCGT+TGG | + | chr3_2:62588967-62588986 | Msa0416020:CDS | 40.0% |
| AACATCATCCACGATTTCCA+AGG | - | chr3_2:62588999-62589018 | None:intergenic | 40.0% | |
| TATTTCTTCGTCAAGTCGAC+AGG | + | chr3_2:62589194-62589213 | Msa0416020:CDS | 40.0% | |
| AACAATCCATCAACTCCTAC+TGG | - | chr3_2:62589644-62589663 | None:intergenic | 40.0% | |
| !! | TGACCATAATAGGCCTTGTT+TGG | + | chr3_2:62589858-62589877 | Msa0416020:intron | 40.0% |
| ! | TGGTGTTTATAGGGCTTGTT+TGG | - | chr3_2:62590137-62590156 | None:intergenic | 40.0% |
| CATGTTTCCTTCCCAACATT+AGG | + | chr3_2:62590470-62590489 | Msa0416020:three_prime_UTR | 40.0% | |
| CCAATTTCCTAATGTTGGGA+AGG | - | chr3_2:62590480-62590499 | None:intergenic | 40.0% | |
| CCTTCCCAACATTAGGAAAT+TGG | + | chr3_2:62590477-62590496 | Msa0416020:three_prime_UTR | 40.0% | |
| ! | TTGGTTTCATCAGGTGCTGT+CGG | + | chr3_2:62584911-62584930 | Msa0416020:CDS | 45.0% |
| ! | CATACCGTTTGAAGTGCTAG+GGG | + | chr3_2:62585104-62585123 | Msa0416020:intron | 45.0% |
| GTTCAACTTGTGGCTTCTGA+AGG | - | chr3_2:62585217-62585236 | None:intergenic | 45.0% | |
| TGTTGGACAAAGCAGCCTTA+TGG | + | chr3_2:62585259-62585278 | Msa0416020:CDS | 45.0% | |
| CTACCTGTTTGTCTTGTAGC+TGG | + | chr3_2:62585441-62585460 | Msa0416020:intron | 45.0% | |
| CATCCAGCTACAAGACAAAC+AGG | - | chr3_2:62585447-62585466 | None:intergenic | 45.0% | |
| GCGTCGTTCTCGTTGAATAT+TGG | - | chr3_2:62585574-62585593 | None:intergenic | 45.0% | |
| TACTAGGAAAGCTCCATACG+AGG | + | chr3_2:62585600-62585619 | Msa0416020:CDS | 45.0% | |
| ! | TTTGGAGACAAGTCTAGGGT+TGG | + | chr3_2:62586105-62586124 | Msa0416020:CDS | 45.0% |
| ! | ACAAGTCTAGGGTTGGAAGA+GGG | + | chr3_2:62586112-62586131 | Msa0416020:CDS | 45.0% |
| ! | GTGCACCTGGTAATGATAAC+AGG | - | chr3_2:62586189-62586208 | None:intergenic | 45.0% |
| ATTCTCCAAGGACAGCGTAT+TGG | + | chr3_2:62586527-62586546 | Msa0416020:CDS | 45.0% | |
| TAAGTGGGTCCCTTCAAAAG+AGG | + | chr3_2:62586574-62586593 | Msa0416020:CDS | 45.0% | |
| AGAAAATGTCTCTCGGATCC+TGG | + | chr3_2:62586673-62586692 | Msa0416020:intron | 45.0% | |
| ACGGCCTGTAACGTAAGATT+AGG | - | chr3_2:62586746-62586765 | None:intergenic | 45.0% | |
| AAAATCCTTGGTTGCTAGGC+TGG | + | chr3_2:62586886-62586905 | Msa0416020:CDS | 45.0% | |
| TAAAACCAGCCTAGCAACCA+AGG | - | chr3_2:62586894-62586913 | None:intergenic | 45.0% | |
| GCAAACATGGAAGATCCGAT+TGG | + | chr3_2:62587072-62587091 | Msa0416020:CDS | 45.0% | |
| ! | GCTTGCAGAGGGGTTAATTT+TGG | + | chr3_2:62587463-62587482 | Msa0416020:intron | 45.0% |
| GGAGAAAACGTCATCTCCTT+TGG | + | chr3_2:62587484-62587503 | Msa0416020:CDS | 45.0% | |
| AGATACTGTCTACCAAGCTG+TGG | + | chr3_2:62587649-62587668 | Msa0416020:intron | 45.0% | |
| GATACTGTCTACCAAGCTGT+GGG | + | chr3_2:62587650-62587669 | Msa0416020:intron | 45.0% | |
| CTTCCTTGGCAATACGAAGT+GGG | + | chr3_2:62587886-62587905 | Msa0416020:CDS | 45.0% | |
| ATTCCCACTTCGTATTGCCA+AGG | - | chr3_2:62587892-62587911 | None:intergenic | 45.0% | |
| TTGGCAATACGAAGTGGGAA+TGG | + | chr3_2:62587891-62587910 | Msa0416020:CDS | 45.0% | |
| TGGCAATACGAAGTGGGAAT+GGG | + | chr3_2:62587892-62587911 | Msa0416020:CDS | 45.0% | |
| ! | AATGGGCTTCTCTTGAAAGG+AGG | + | chr3_2:62587909-62587928 | Msa0416020:CDS | 45.0% |
| GAAGCCATACCTGATACTGT+TGG | + | chr3_2:62588077-62588096 | Msa0416020:CDS | 45.0% | |
| TGTGGCACATTTCACTAAGC+TGG | + | chr3_2:62588213-62588232 | Msa0416020:intron | 45.0% | |
| TCGACGAAAATCCCTGTTCT+AGG | + | chr3_2:62588327-62588346 | Msa0416020:CDS | 45.0% | |
| TACCAGCATGACCTAGAACA+GGG | - | chr3_2:62588341-62588360 | None:intergenic | 45.0% | |
| TTACCAGCATGACCTAGAAC+AGG | - | chr3_2:62588342-62588361 | None:intergenic | 45.0% | |
| ! | AGGATTTGGTAGAGAAAGGC+TGG | + | chr3_2:62588686-62588705 | Msa0416020:CDS | 45.0% |
| GTATGTGCACTGCCATAATG+GGG | - | chr3_2:62589136-62589155 | None:intergenic | 45.0% | |
| GGTATGTGCACTGCCATAAT+GGG | - | chr3_2:62589137-62589156 | None:intergenic | 45.0% | |
| GCTAGTACAAGATTCAGCGA+TGG | + | chr3_2:62589465-62589484 | Msa0416020:CDS | 45.0% | |
| ! | GATGGAGCACGATTTGGATT+AGG | + | chr3_2:62589483-62589502 | Msa0416020:CDS | 45.0% |
| AGGTTGGAATAAGCACAAGC+AGG | + | chr3_2:62589603-62589622 | Msa0416020:intron | 45.0% | |
| GCGACTGTTTATGAGAGCTA+TGG | - | chr3_2:62590074-62590093 | None:intergenic | 45.0% | |
| ! | TTCCTTTGAGAAGCCTGCAT+TGG | - | chr3_2:62590200-62590219 | None:intergenic | 45.0% |
| GGAAGTGGACAAGTAGTAGA+TGG | + | chr3_2:62590216-62590235 | Msa0416020:CDS | 45.0% | |
| AGTTAGGTCTTTGTGGGTGT+AGG | - | chr3_2:62590256-62590275 | None:intergenic | 45.0% | |
| TGAAAATCCGCATGAAGCGA+CGG | + | chr3_2:62590292-62590311 | Msa0416020:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTCAATTTTATTTTA+AGG | + | chr3_2:62585142-62585161 | Msa0416020:intron | 5.0% |
| !! | AATTTAAATAACATATATTA+AGG | - | chr3_2:62588636-62588655 | None:intergenic | 5.0% |
| !!! | TTAATTTATCATTATATTTT+GGG | + | chr3_2:62589573-62589592 | Msa0416020:intron | 5.0% |
| GTGGAGAGAAACAGGGATGA+AGG | - | chr3_2:62584479-62584498 | None:intergenic | 50.0% | |
| !! | CGGTTTGGTGGAGAGAAACA+GGG | - | chr3_2:62584486-62584505 | None:intergenic | 50.0% |
| !! | TCGGTTTGGTGGAGAGAAAC+AGG | - | chr3_2:62584487-62584506 | None:intergenic | 50.0% |
| TCTCTCCACCAAACCGAAGA+TGG | + | chr3_2:62584490-62584509 | Msa0416020:exon | 50.0% | |
| GCTGTTGTTACTCGCCAAGA+TGG | + | chr3_2:62584710-62584729 | Msa0416020:CDS | 50.0% | |
| !! | ATTAGGGGCACTATGTGAGC+AGG | + | chr3_2:62584751-62584770 | Msa0416020:CDS | 50.0% |
| ATCTAAGCCTTTGTCGACCG+AGG | - | chr3_2:62584937-62584956 | None:intergenic | 50.0% | |
| ATGGGGGCTTCACAACAACA+TGG | + | chr3_2:62585021-62585040 | Msa0416020:intron | 50.0% | |
| TGGGGGCTTCACAACAACAT+GGG | + | chr3_2:62585022-62585041 | Msa0416020:intron | 50.0% | |
| AGAACGACGCAGTCAGTACT+AGG | + | chr3_2:62585584-62585603 | Msa0416020:CDS | 50.0% | |
| ! | GACAAGTCTAGGGTTGGAAG+AGG | + | chr3_2:62586111-62586130 | Msa0416020:CDS | 50.0% |
| ! | CAAGTCTAGGGTTGGAAGAG+GGG | + | chr3_2:62586113-62586132 | Msa0416020:CDS | 50.0% |
| ! | AAGTCTAGGGTTGGAAGAGG+GGG | + | chr3_2:62586114-62586133 | Msa0416020:CDS | 50.0% |
| TCTGTTCATGCTGCTGATGC+CGG | + | chr3_2:62586159-62586178 | Msa0416020:CDS | 50.0% | |
| !! | AGAGGTTGATGTACGCGAGA+TGG | + | chr3_2:62586592-62586611 | Msa0416020:CDS | 50.0% |
| TAAAGAGACCTGAAGCCGTC+TGG | - | chr3_2:62586639-62586658 | None:intergenic | 50.0% | |
| TACGTTACAGGCCGTGTCTT+CGG | + | chr3_2:62586751-62586770 | Msa0416020:intron | 50.0% | |
| GTTGTTGCTGCACAAGAAGC+AGG | + | chr3_2:62586857-62586876 | Msa0416020:CDS | 50.0% | |
| GCTTCCTTGGCAATACGAAG+TGG | + | chr3_2:62587885-62587904 | Msa0416020:CDS | 50.0% | |
| ! | GGGAATGGGCTTCTCTTGAA+AGG | + | chr3_2:62587906-62587925 | Msa0416020:CDS | 50.0% |
| GCTTCTCTTGAAAGGAGGCA+AGG | + | chr3_2:62587914-62587933 | Msa0416020:CDS | 50.0% | |
| TCTCTTGAAAGGAGGCAAGG+AGG | + | chr3_2:62587917-62587936 | Msa0416020:CDS | 50.0% | |
| ! | ATCCCTGTTCTAGGTCATGC+TGG | + | chr3_2:62588336-62588355 | Msa0416020:CDS | 50.0% |
| TCCATCAGGATGCAATGCCA+TGG | + | chr3_2:62588558-62588577 | Msa0416020:CDS | 50.0% | |
| ACCATGGCATTGCATCCTGA+TGG | - | chr3_2:62588562-62588581 | None:intergenic | 50.0% | |
| CGGTATGTGCACTGCCATAA+TGG | - | chr3_2:62589138-62589157 | None:intergenic | 50.0% | |
| TTCAGCGATGGAGCACGATT+TGG | + | chr3_2:62589477-62589496 | Msa0416020:CDS | 50.0% | |
| ! | ACGATTTGGATTAGGCGCAG+AGG | + | chr3_2:62589491-62589510 | Msa0416020:CDS | 50.0% |
| GCACAAGCAGGATTCATGCT+CGG | + | chr3_2:62589615-62589634 | Msa0416020:CDS | 50.0% | |
| CACAAGCAGGATTCATGCTC+GGG | + | chr3_2:62589616-62589635 | Msa0416020:CDS | 50.0% | |
| ACAAGCAGGATTCATGCTCG+GGG | + | chr3_2:62589617-62589636 | Msa0416020:CDS | 50.0% | |
| !! | GAGCATCGGCTTATACCATC+TGG | - | chr3_2:62589672-62589691 | None:intergenic | 50.0% |
| TGCCAATGCAGGCTTCTCAA+AGG | + | chr3_2:62590195-62590214 | Msa0416020:intron | 50.0% | |
| TGCAGGCTTCTCAAAGGAAG+TGG | + | chr3_2:62590201-62590220 | Msa0416020:intron | 50.0% | |
| !! | GTTCGCCATCTTCGGTTTGG+TGG | - | chr3_2:62584498-62584517 | None:intergenic | 55.0% |
| GGGCTTCACAACAACATGGG+CGG | + | chr3_2:62585025-62585044 | Msa0416020:intron | 55.0% | |
| GGGTACCAATACGCTGTCCT+TGG | - | chr3_2:62586535-62586554 | None:intergenic | 55.0% | |
| AGGCCGTGTCTTCGGAAGAA+AGG | + | chr3_2:62586759-62586778 | Msa0416020:intron | 55.0% | |
| ! | TCGCCCTGATGCATTGGTAC+AGG | + | chr3_2:62587532-62587551 | Msa0416020:CDS | 55.0% |
| CTGTCTACCAAGCTGTGGGT+CGG | + | chr3_2:62587654-62587673 | Msa0416020:intron | 55.0% | |
| TGTCTACCAAGCTGTGGGTC+GGG | + | chr3_2:62587655-62587674 | Msa0416020:intron | 55.0% | |
| AGTGACGATTTGCGGTCGGA+AGG | + | chr3_2:62588721-62588740 | Msa0416020:CDS | 55.0% | |
| !! | CTGTTCGTTGGCTTGCACCT+TGG | + | chr3_2:62588979-62588998 | Msa0416020:CDS | 55.0% |
| GGCTTGCACCTTGGAAATCG+TGG | + | chr3_2:62588988-62589007 | Msa0416020:CDS | 55.0% | |
| ATTCATGCTCGGGGTCCAGT+AGG | + | chr3_2:62589626-62589645 | Msa0416020:CDS | 55.0% | |
| GGCGTTCGCCATCTTCGGTT+TGG | - | chr3_2:62584501-62584520 | None:intergenic | 60.0% | |
| ! | TCATCAGGTGCTGTCGGCCT+CGG | + | chr3_2:62584917-62584936 | Msa0416020:CDS | 60.0% |
| ! | GGCAAGGCTTGTGCTGCTGT+TGG | + | chr3_2:62585242-62585261 | Msa0416020:CDS | 60.0% |
| CGAGATGGCTGTTGCCGCTA+GGG | + | chr3_2:62586607-62586626 | Msa0416020:CDS | 60.0% | |
| ! | CCGTCTGGAACAGTCCCTAG+CGG | - | chr3_2:62586624-62586643 | None:intergenic | 60.0% |
| CCGCTAGGGACTGTTCCAGA+CGG | + | chr3_2:62586621-62586640 | Msa0416020:CDS | 60.0% | |
| GGACTGTTCCAGACGGCTTC+AGG | + | chr3_2:62586628-62586647 | Msa0416020:CDS | 60.0% | |
| CGAGTCTCGCCCTGATGCAT+TGG | + | chr3_2:62587526-62587545 | Msa0416020:CDS | 60.0% | |
| CGGGGTCCAGTAGGAGTTGA+TGG | + | chr3_2:62589635-62589654 | Msa0416020:CDS | 60.0% | |
| AATCCGCATGAAGCGACGGC+AGG | + | chr3_2:62590296-62590315 | Msa0416020:three_prime_UTR | 60.0% | |
| TTGCCTGCCGTCGCTTCATG+CGG | - | chr3_2:62590302-62590321 | None:intergenic | 60.0% | |
| GGGTCGGCGTTCGCCATCTT+CGG | - | chr3_2:62584506-62584525 | None:intergenic | 65.0% | |
| CTGTCGGCCTCGGTCGACAA+AGG | + | chr3_2:62584927-62584946 | Msa0416020:CDS | 65.0% | |
| GCGAGATGGCTGTTGCCGCT+AGG | + | chr3_2:62586606-62586625 | Msa0416020:CDS | 65.0% | |
| GTAAGGCCCGACCCACAGCT+TGG | - | chr3_2:62587664-62587683 | None:intergenic | 65.0% | |
| GCATGAAGCGACGGCAGGCA+AGG | + | chr3_2:62590301-62590320 | Msa0416020:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 62584423 | 62590636 | 62584423 | ID=Msa0416020;Name=Msa0416020 |
| chr3_2 | mRNA | 62584423 | 62590636 | 62584423 | ID=Msa0416020-mRNA-1;Parent=Msa0416020;Name=Msa0416020-mRNA-1;_AED=0.13;_eAED=0.13;_QI=86|0.94|0.95|1|1|1|20|355|718 |
| chr3_2 | exon | 62584423 | 62584568 | 62584423 | ID=Msa0416020-mRNA-1:exon:13534;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62584701 | 62584772 | 62584701 | ID=Msa0416020-mRNA-1:exon:13535;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62584875 | 62584978 | 62584875 | ID=Msa0416020-mRNA-1:exon:13536;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62585205 | 62585307 | 62585205 | ID=Msa0416020-mRNA-1:exon:13537;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62585460 | 62585621 | 62585460 | ID=Msa0416020-mRNA-1:exon:13538;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62585925 | 62586202 | 62585925 | ID=Msa0416020-mRNA-1:exon:13539;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62586499 | 62586649 | 62586499 | ID=Msa0416020-mRNA-1:exon:13540;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62586761 | 62586941 | 62586761 | ID=Msa0416020-mRNA-1:exon:13541;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62587046 | 62587116 | 62587046 | ID=Msa0416020-mRNA-1:exon:13542;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62587464 | 62587553 | 62587464 | ID=Msa0416020-mRNA-1:exon:13543;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62587882 | 62587968 | 62587882 | ID=Msa0416020-mRNA-1:exon:13544;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62588068 | 62588154 | 62588068 | ID=Msa0416020-mRNA-1:exon:13545;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62588261 | 62588357 | 62588261 | ID=Msa0416020-mRNA-1:exon:13546;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62588476 | 62588579 | 62588476 | ID=Msa0416020-mRNA-1:exon:13547;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62588667 | 62588742 | 62588667 | ID=Msa0416020-mRNA-1:exon:13548;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62588903 | 62589053 | 62588903 | ID=Msa0416020-mRNA-1:exon:13549;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62589147 | 62589215 | 62589147 | ID=Msa0416020-mRNA-1:exon:13550;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62589446 | 62589512 | 62589446 | ID=Msa0416020-mRNA-1:exon:13551;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62589605 | 62589675 | 62589605 | ID=Msa0416020-mRNA-1:exon:13552;Parent=Msa0416020-mRNA-1 |
| chr3_2 | exon | 62590206 | 62590636 | 62590206 | ID=Msa0416020-mRNA-1:exon:13553;Parent=Msa0416020-mRNA-1 |
| chr3_2 | five_prime_UTR | 62584423 | 62584508 | 62584423 | ID=Msa0416020-mRNA-1:five_prime_utr;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62584509 | 62584568 | 62584509 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62584701 | 62584772 | 62584701 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62584875 | 62584978 | 62584875 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62585205 | 62585307 | 62585205 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62585460 | 62585621 | 62585460 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62585925 | 62586202 | 62585925 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62586499 | 62586649 | 62586499 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62586761 | 62586941 | 62586761 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62587046 | 62587116 | 62587046 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62587464 | 62587553 | 62587464 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62587882 | 62587968 | 62587882 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62588068 | 62588154 | 62588068 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62588261 | 62588357 | 62588261 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62588476 | 62588579 | 62588476 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62588667 | 62588742 | 62588667 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62588903 | 62589053 | 62588903 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62589147 | 62589215 | 62589147 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62589446 | 62589512 | 62589446 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62589605 | 62589675 | 62589605 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | CDS | 62590206 | 62590281 | 62590206 | ID=Msa0416020-mRNA-1:cds;Parent=Msa0416020-mRNA-1 |
| chr3_2 | three_prime_UTR | 62590282 | 62590636 | 62590282 | ID=Msa0416020-mRNA-1:three_prime_utr;Parent=Msa0416020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
