AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1028870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1028870 MtrunA17_Chr7g0249231 98.239 284 5 0 1 284 1 284 0.0 561
Msa1028870 MtrunA17_Chr1g0210221 40.351 228 109 3 74 281 6 226 1.00e-51 169
Msa1028870 MtrunA17_Chr1g0169451 41.232 211 117 2 76 279 152 362 1.42e-41 147
Msa1028870 MtrunA17_Chr5g0397071 36.019 211 114 5 82 279 145 347 2.14e-28 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1028870 AT5G36290.1 73.852 283 62 5 13 283 11 293 2.42e-132 377
Msa1028870 AT5G36290.2 73.852 283 62 5 13 283 11 293 2.42e-132 377
Msa1028870 AT1G68650.1 43.946 223 111 2 72 281 4 225 9.74e-56 179
Msa1028870 AT1G25520.1 41.991 231 100 2 72 278 4 224 3.08e-55 178
Msa1028870 AT4G13590.1 40.741 216 111 4 76 279 146 356 1.23e-41 147
Msa1028870 AT4G13590.2 40.741 216 111 4 76 279 146 356 1.36e-41 147
Msa1028870 AT1G64150.1 34.559 272 143 8 27 274 101 361 5.79e-25 102

Find 148 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTCTTCTGTGAAGATTT+TGG 0.120668 7_1:-62071936 None:intergenic
CGGTCGGGTTCGGGCGGGTT+CGG 0.143417 7_1:-62069623 None:intergenic
GTTGTCTTTGTTGTAGAATT+TGG 0.160892 7_1:+62073081 Msa1028870:three_prime_UTR
TGCTTCTTTGAAATCAAATT+TGG 0.183884 7_1:-62071522 None:intergenic
CATTGTTATTGTCATTATTT+TGG 0.214461 7_1:+62073199 Msa1028870:three_prime_UTR
AGCAGCTTCAGCCCAGATTT+TGG 0.236034 7_1:+62069430 Msa1028870:five_prime_UTR
GTCTGATCGGGTGGGTTGTT+CGG 0.253237 7_1:-62069496 None:intergenic
GGTCGGGTTCGGGCGGGTTC+GGG 0.253259 7_1:-62069622 None:intergenic
TCTCTTAGCTTGGATTCTTC+TGG 0.261688 7_1:+62070319 Msa1028870:CDS
CAAAATCTTATATTCCAATT+AGG 0.264772 7_1:-62073137 None:intergenic
TTTGAAGACTCCCTTACTTT+TGG 0.271980 7_1:+62073263 Msa1028870:three_prime_UTR
GACTGAGCAACGGTCGGGTT+CGG 0.274683 7_1:-62069633 None:intergenic
TTCATCCATATTGCCAAGTT+CGG 0.291778 7_1:+62069598 Msa1028870:five_prime_UTR
GTTTGTGCGGGTCTCGGTTT+GGG 0.294385 7_1:-62069528 None:intergenic
TAGGAAAGTTCGATCCTAAT+TGG 0.295140 7_1:+62073123 Msa1028870:three_prime_UTR
ATGAAAGTAGAACCAAAATC+TGG 0.305428 7_1:-62069442 None:intergenic
TTGTCTTTGTTGTAGAATTT+GGG 0.312632 7_1:+62073082 Msa1028870:three_prime_UTR
ATTTATTATAGCAGCTCTTA+TGG 0.317879 7_1:+62071226 Msa1028870:CDS
TCTGATCGGGTGGGTTGTTC+GGG 0.322870 7_1:-62069495 None:intergenic
ACTGAGCAACGGTCGGGTTC+GGG 0.331814 7_1:-62069632 None:intergenic
AAAGTAGCAACAACCGTGTT+TGG 0.345145 7_1:+62069688 Msa1028870:five_prime_UTR
AAGAAGAAAATTAGAAAGTA+AGG 0.349891 7_1:-62069820 None:intergenic
ATCATTTAAATCGTGTTTGT+TGG 0.352507 7_1:-62073371 None:intergenic
CGGGCCCGAACTTGGCAATA+TGG 0.353874 7_1:-62069603 None:intergenic
TTTATATTCATAGGATTCTC+TGG 0.357110 7_1:+62070121 Msa1028870:intron
GGTTTGTGCGGGTCTCGGTT+TGG 0.358891 7_1:-62069529 None:intergenic
AAGTAGCAACAACCGTGTTT+GGG 0.359801 7_1:+62069689 Msa1028870:five_prime_UTR
AATTAGGATCGAACTTTCCT+AGG 0.363531 7_1:-62073121 None:intergenic
TCATCCATATTGCCAAGTTC+GGG 0.367525 7_1:+62069599 Msa1028870:five_prime_UTR
CGGGTATCGGTCTGATCGGG+TGG 0.368465 7_1:-62069505 None:intergenic
AACTTGGTTTGTGCGGGTCT+CGG 0.370128 7_1:-62069534 None:intergenic
GCGGAAGTGGTTCTTGAAAT+GGG 0.374351 7_1:+62069566 Msa1028870:five_prime_UTR
CTTCCGCCCACAACTTAACT+TGG 0.379291 7_1:-62069550 None:intergenic
AGCTTGGATTCTTCTGGTGT+TGG 0.387172 7_1:+62070325 Msa1028870:CDS
GGCGGAAGTGGTTCTTGAAA+TGG 0.387510 7_1:+62069565 Msa1028870:five_prime_UTR
TTCGGTCATTTCTCTTAGCT+TGG 0.388909 7_1:+62070309 Msa1028870:CDS
GGCGGGTTCGGGCCCGAACT+TGG 0.392785 7_1:-62069611 None:intergenic
TACGACTGCTGTACATTGCT+TGG 0.393896 7_1:+62071904 Msa1028870:CDS
CCTAAGTCAATTGTCTTGTC+TGG 0.404108 7_1:+62071260 Msa1028870:CDS
TTACTGCAATTGTCGCAATC+TGG 0.411024 7_1:-62072623 None:intergenic
CCGGTAGTGGGATCTGGTTA+TGG 0.415994 7_1:-62069792 None:intergenic
GTAGCAGCTGGGGCCACCAT+AGG 0.426028 7_1:+62072837 Msa1028870:CDS
AATTCCAAAATCCAAAAGTA+AGG 0.426194 7_1:-62073274 None:intergenic
GTCTCGGTTTGGGCGGGTAT+CGG 0.426401 7_1:-62069518 None:intergenic
GTGCGGGTCTCGGTTTGGGC+GGG 0.431879 7_1:-62069524 None:intergenic
GTCCATTAGGTACTTTCTAC+AGG 0.433115 7_1:+62071483 Msa1028870:intron
TGCATGACTATCTATTGAAA+TGG 0.438461 7_1:-62073322 None:intergenic
AGTTAAGTTGTGGGCGGAAG+TGG 0.446338 7_1:+62069553 Msa1028870:five_prime_UTR
GACAAGGGAAAACTTCATTT+CGG 0.446559 7_1:+62072440 Msa1028870:CDS
TGGGCGGGTATCGGTCTGAT+CGG 0.459282 7_1:-62069509 None:intergenic
GTAGATCCGGTAGTGGGATC+TGG 0.462407 7_1:-62069798 None:intergenic
ATCTTCACAGAAGAAAGAAA+TGG 0.475060 7_1:+62071941 Msa1028870:CDS
ACAACTTAACTTGGTTTGTG+CGG 0.477519 7_1:-62069541 None:intergenic
GTCGGTGGTCTTCTCTTCCT+AGG 0.477783 7_1:+62072939 Msa1028870:CDS
GACAGTGGCTACAGAGCGTT+GGG 0.479778 7_1:-62072919 None:intergenic
TCTAGGACTGAGCAACGGTC+GGG 0.483067 7_1:-62069638 None:intergenic
AATGCAATCGGAGTAGCAGC+TGG 0.484261 7_1:+62072825 Msa1028870:CDS
GTTTGGGGATCTTGCATCGA+AGG 0.485451 7_1:+62069705 Msa1028870:five_prime_UTR
GATTGCGTGAATTGAATTGA+AGG 0.486295 7_1:-62069742 None:intergenic
GGGCGGGTATCGGTCTGATC+GGG 0.486625 7_1:-62069508 None:intergenic
ACTTACCGTCATTATAATCA+AGG 0.489547 7_1:-62071294 None:intergenic
ATTAGAAAGTAAGGTAGATC+CGG 0.490579 7_1:-62069811 None:intergenic
ATTCTCTGGCTCACGACGAC+AGG 0.492028 7_1:+62070135 Msa1028870:CDS
TTCTAGGACTGAGCAACGGT+CGG 0.492231 7_1:-62069639 None:intergenic
TTCAACGATGTGTGGAGAGA+AGG 0.496951 7_1:-62073239 None:intergenic
CTCTAGATTAATACAAGTGC+TGG 0.497882 7_1:+62072991 Msa1028870:exon
CAACTTAACTTGGTTTGTGC+GGG 0.506525 7_1:-62069540 None:intergenic
GCACTACGATTCAACATCAA+TGG 0.507707 7_1:+62069979 Msa1028870:CDS
CACGACGACAGGCAAGAATC+CGG 0.512240 7_1:+62070146 Msa1028870:CDS
GCGTTGAATGATATAGAGAA+TGG 0.513923 7_1:+62070286 Msa1028870:CDS
CATACAAATAGTGCTGCTAC+AGG 0.516828 7_1:+62071543 Msa1028870:CDS
TAGCAGCTGGGGCCACCATA+GGG 0.516894 7_1:+62072838 Msa1028870:CDS
CGTCGTTCAAACCTTCGCTC+AGG 0.518400 7_1:+62070035 Msa1028870:CDS
GAGGAAGCATGCTGGCATCT+AGG 0.521221 7_1:+62072892 Msa1028870:CDS
ATGAAGACAAAGAAAAGCCT+AGG 0.528533 7_1:-62072956 None:intergenic
CACAAACCAAGTTAAGTTGT+GGG 0.529376 7_1:+62069544 Msa1028870:five_prime_UTR
GAGCAACGGTCGGGTTCGGG+CGG 0.533712 7_1:-62069629 None:intergenic
ATGTACCTCAGTGGCAGTGG+TGG 0.534768 7_1:+62072869 Msa1028870:CDS
TATTGTTTAGTTGTGACTTG+TGG 0.538499 7_1:+62069472 Msa1028870:five_prime_UTR
CAATTGTCGCAATCTGGCTA+CGG 0.543283 7_1:-62072617 None:intergenic
ATGCAATCGGAGTAGCAGCT+GGG 0.543597 7_1:+62072826 Msa1028870:CDS
CGACAGTGGCTACAGAGCGT+TGG 0.546302 7_1:-62072920 None:intergenic
TCCGGTGGATCTGTGGATCT+CGG 0.548999 7_1:+62070164 Msa1028870:CDS
TTTAACATTCCTTGCTGAGT+GGG 0.550817 7_1:+62072590 Msa1028870:CDS
AGCAACGGTCGGGTTCGGGC+GGG 0.552370 7_1:-62069628 None:intergenic
ATTAGGATCGAACTTTCCTA+GGG 0.552495 7_1:-62073120 None:intergenic
GCAGAGGAGAAGAACGAAAA+CGG 0.558746 7_1:-62070010 None:intergenic
AGTGGTGGGAGGAAGCATGC+TGG 0.559364 7_1:+62072884 Msa1028870:CDS
GCAAGAATCCGGTGGATCTG+TGG 0.559609 7_1:+62070157 Msa1028870:CDS
TGAAAGTAGAACCAAAATCT+GGG 0.559665 7_1:-62069441 None:intergenic
ATCAATGATTCTCGTTAGTG+AGG 0.560283 7_1:+62070375 Msa1028870:CDS
CCAGACAAGACAATTGACTT+AGG 0.562706 7_1:-62071260 None:intergenic
TGTGCGGGTCTCGGTTTGGG+CGG 0.563882 7_1:-62069525 None:intergenic
GCACAAACCAAGTTAAGTTG+TGG 0.565318 7_1:+62069543 Msa1028870:five_prime_UTR
AATATGTACCTCAGTGGCAG+TGG 0.565729 7_1:+62072866 Msa1028870:CDS
GGGTATCGGTCTGATCGGGT+GGG 0.567746 7_1:-62069504 None:intergenic
TCAACGATGTGTGGAGAGAA+GGG 0.569143 7_1:-62073238 None:intergenic
CAACGCTCTGTAGCCACTGT+CGG 0.569412 7_1:+62072921 Msa1028870:CDS
TAGGTACTTTCTACAGGACT+AGG 0.570677 7_1:+62071489 Msa1028870:intron
GGTACATATTGTGTGCCCTA+TGG 0.570961 7_1:-62072853 None:intergenic
CTGTGGCGGTTGAATTTGCG+AGG 0.571205 7_1:-62069946 None:intergenic
GAATGATATAGAGAATGGTT+CGG 0.572567 7_1:+62070291 Msa1028870:CDS
AGCACTTGTATTAATCTAGA+GGG 0.573165 7_1:-62072989 None:intergenic
CAAAATAATGACAATAACAA+TGG 0.573630 7_1:-62073198 None:intergenic
CGGAAGTGGTTCTTGAAATG+GGG 0.577852 7_1:+62069567 Msa1028870:five_prime_UTR
AAGTAAGGTAGATCCGGTAG+TGG 0.578706 7_1:-62069805 None:intergenic
AGGTTTGAACGACGAAGCAG+AGG 0.579424 7_1:-62070026 None:intergenic
ATTCCAAAATCCAAAAGTAA+GGG 0.584772 7_1:-62073273 None:intergenic
TACGGTCACCCCACTCAGCA+AGG 0.586363 7_1:-62072599 None:intergenic
AGATTAATACAAGTGCTGGT+TGG 0.587086 7_1:+62072995 Msa1028870:exon
GTTGTATCTACCTACTCCCT+AGG 0.587735 7_1:+62073104 Msa1028870:three_prime_UTR
ACATATTGTGTGCCCTATGG+TGG 0.588291 7_1:-62072850 None:intergenic
ACCTCAGTGGCAGTGGTGGG+AGG 0.588861 7_1:+62072873 Msa1028870:CDS
CAGCACTTGTATTAATCTAG+AGG 0.589972 7_1:-62072990 None:intergenic
ACCGAGATCCACAGATCCAC+CGG 0.590630 7_1:-62070165 None:intergenic
AAGTGCCTTGATTATAATGA+CGG 0.591556 7_1:+62071289 Msa1028870:CDS
CTTCAAAGTTCAACGATGTG+TGG 0.596681 7_1:-62073247 None:intergenic
TTTAAATGATGACTTTGACT+AGG 0.598691 7_1:+62073384 Msa1028870:three_prime_UTR
AGCACGTTAAAACTGTAATG+TGG 0.601004 7_1:+62073298 Msa1028870:three_prime_UTR
CACTTGTATTAATCTAGAGG+GGG 0.603175 7_1:-62072987 None:intergenic
CCATAACCAGATCCCACTAC+CGG 0.603818 7_1:+62069792 Msa1028870:five_prime_UTR
GTGAATTGAATTGAAGGTGA+TGG 0.604472 7_1:-62069736 None:intergenic
TACTTTCTACAGGACTAGGA+AGG 0.605041 7_1:+62071493 Msa1028870:CDS
TTAACATTCCTTGCTGAGTG+GGG 0.606715 7_1:+62072591 Msa1028870:CDS
TGAAATTGAGAGAGAGAACA+AGG 0.610740 7_1:-62069366 None:intergenic
CGCTCTGTAGCCACTGTCGG+TGG 0.611670 7_1:+62072924 Msa1028870:CDS
CGATGCAAGATCCCCAAACA+CGG 0.622630 7_1:-62069701 None:intergenic
AATGAAGCTGACCTGAGCGA+AGG 0.623925 7_1:-62070046 None:intergenic
AGTAGCAACAACCGTGTTTG+GGG 0.623975 7_1:+62069690 Msa1028870:five_prime_UTR
TGTACCTCAGTGGCAGTGGT+GGG 0.630607 7_1:+62072870 Msa1028870:CDS
ATCGAACTTTCCTAGGGAGT+AGG 0.631723 7_1:-62073114 None:intergenic
TCCTCCCACCACTGCCACTG+AGG 0.633636 7_1:-62072874 None:intergenic
GGAAGTGGTTCTTGAAATGG+GGG 0.636804 7_1:+62069568 Msa1028870:five_prime_UTR
GAAGAGAAGACCACCGACAG+TGG 0.640727 7_1:-62072934 None:intergenic
TGCAATCGGAGTAGCAGCTG+GGG 0.642034 7_1:+62072827 Msa1028870:CDS
AGTAAGGTAGATCCGGTAGT+GGG 0.643825 7_1:-62069804 None:intergenic
GCACTTGTATTAATCTAGAG+GGG 0.643990 7_1:-62072988 None:intergenic
AAGGGAAAACTTCATTTCGG+CGG 0.657157 7_1:+62072443 Msa1028870:CDS
TAGAGATGCTTACTTTGGCG+CGG 0.657983 7_1:-62070190 None:intergenic
TGTGGCGGTTGAATTTGCGA+GGG 0.661732 7_1:-62069945 None:intergenic
ACTTGTATTAATCTAGAGGG+GGG 0.683100 7_1:-62072986 None:intergenic
GACGACAGGCAAGAATCCGG+TGG 0.690791 7_1:+62070149 Msa1028870:CDS
GATGTTGAATCGTAGTGCCA+TGG 0.692820 7_1:-62069974 None:intergenic
AAACCAAGTTAAGTTGTGGG+CGG 0.698473 7_1:+62069547 Msa1028870:five_prime_UTR
GTGCCATGGTGAATCTGTGG+CGG 0.700561 7_1:-62069960 None:intergenic
CAACCGCCACAGATTCACCA+TGG 0.703037 7_1:+62069957 Msa1028870:exon
GTAGTGCCATGGTGAATCTG+TGG 0.713130 7_1:-62069963 None:intergenic
GCACACAATATGTACCTCAG+TGG 0.739190 7_1:+62072860 Msa1028870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAGTATTATAAATAAAATT+AGG - chr7_1:62070434-62070453 None:intergenic 10.0%
!! TACAAATAATCAAATATTTA+GGG - chr7_1:62072671-62072690 None:intergenic 10.0%
!! AGTGAAAAAAAAAAAAATTA+AGG - chr7_1:62073056-62073075 None:intergenic 10.0%
!!! AATATTTTACAAAAATGAAT+GGG - chr7_1:62073166-62073185 None:intergenic 10.0%
!!! AAATATTTTACAAAAATGAA+TGG - chr7_1:62073167-62073186 None:intergenic 10.0%
!! CTAGTATTATAAATAAAATT+AGG - chr7_1:62070434-62070453 None:intergenic 10.0%
!! TACAAATAATCAAATATTTA+GGG - chr7_1:62072671-62072690 None:intergenic 10.0%
!! AGTGAAAAAAAAAAAAATTA+AGG - chr7_1:62073056-62073075 None:intergenic 10.0%
!!! AATATTTTACAAAAATGAAT+GGG - chr7_1:62073166-62073185 None:intergenic 10.0%
!!! AAATATTTTACAAAAATGAA+TGG - chr7_1:62073167-62073186 None:intergenic 10.0%
!!! TTTGTACAAACTTTTTATAA+CGG - chr7_1:62070875-62070894 None:intergenic 15.0%
!!! ATACTAATTGTTATTTCAAT+TGG + chr7_1:62071000-62071019 Msa1028870:intron 15.0%
!!! TACTAATTGTTATTTCAATT+GGG + chr7_1:62071001-62071020 Msa1028870:intron 15.0%
!! GTACAAATAATCAAATATTT+AGG - chr7_1:62072672-62072691 None:intergenic 15.0%
!!! TTTTTTTTTTTTTCACTTGA+TGG + chr7_1:62073059-62073078 Msa1028870:three_prime_UTR 15.0%
!!! TTTGTACAAACTTTTTATAA+CGG - chr7_1:62070875-62070894 None:intergenic 15.0%
!!! ATACTAATTGTTATTTCAAT+TGG + chr7_1:62071000-62071019 Msa1028870:intron 15.0%
!!! TACTAATTGTTATTTCAATT+GGG + chr7_1:62071001-62071020 Msa1028870:intron 15.0%
!! GTACAAATAATCAAATATTT+AGG - chr7_1:62072672-62072691 None:intergenic 15.0%
!!! TTTTTTTTTTTTTCACTTGA+TGG + chr7_1:62073059-62073078 Msa1028870:three_prime_UTR 15.0%
!!! TATTATCAATCGTTTTTTCT+AGG - chr7_1:62069658-62069677 None:intergenic 20.0%
!! AAGAAGAAAATTAGAAAGTA+AGG - chr7_1:62069823-62069842 None:intergenic 20.0%
!! GAATATAAACAAACACATTA+CGG - chr7_1:62070110-62070129 None:intergenic 20.0%
!! ATGTGTTTGTTTATATTCAT+AGG + chr7_1:62070112-62070131 Msa1028870:intron 20.0%
!! CAAATTATGCAATAAAATCA+AGG - chr7_1:62070485-62070504 None:intergenic 20.0%
!!! TTTTAGTTGTAAACTATGAT+AGG + chr7_1:62070529-62070548 Msa1028870:intron 20.0%
!! CTAATAGTTAAATATCAGTT+AGG - chr7_1:62070801-62070820 None:intergenic 20.0%
!!! ACTAATTGTTATTTCAATTG+GGG + chr7_1:62071002-62071021 Msa1028870:intron 20.0%
!!! TAAAAAGCATTTATAGAAAG+AGG - chr7_1:62071045-62071064 None:intergenic 20.0%
!!! TTTTAGAATTTTATGTGACT+AGG + chr7_1:62071060-62071079 Msa1028870:intron 20.0%
!! TACTATAATTAACATTGTTC+TGG + chr7_1:62071640-62071659 Msa1028870:intron 20.0%
!!! CATTCATTATCTTGTTTTTA+TGG + chr7_1:62071783-62071802 Msa1028870:intron 20.0%
!! CAAAATCTTATATTCCAATT+AGG - chr7_1:62073140-62073159 None:intergenic 20.0%
!! CAAAATAATGACAATAACAA+TGG - chr7_1:62073201-62073220 None:intergenic 20.0%
!!! CATTGTTATTGTCATTATTT+TGG + chr7_1:62073199-62073218 Msa1028870:three_prime_UTR 20.0%
!!! TTATTGTCATTATTTTGGAA+GGG + chr7_1:62073204-62073223 Msa1028870:three_prime_UTR 20.0%
!!! TATTATCAATCGTTTTTTCT+AGG - chr7_1:62069658-62069677 None:intergenic 20.0%
!! AAGAAGAAAATTAGAAAGTA+AGG - chr7_1:62069823-62069842 None:intergenic 20.0%
!! GAATATAAACAAACACATTA+CGG - chr7_1:62070110-62070129 None:intergenic 20.0%
!! ATGTGTTTGTTTATATTCAT+AGG + chr7_1:62070112-62070131 Msa1028870:intron 20.0%
!! CAAATTATGCAATAAAATCA+AGG - chr7_1:62070485-62070504 None:intergenic 20.0%
!!! TTTTAGTTGTAAACTATGAT+AGG + chr7_1:62070529-62070548 Msa1028870:intron 20.0%
!! CTAATAGTTAAATATCAGTT+AGG - chr7_1:62070801-62070820 None:intergenic 20.0%
!!! ACTAATTGTTATTTCAATTG+GGG + chr7_1:62071002-62071021 Msa1028870:intron 20.0%
!!! TAAAAAGCATTTATAGAAAG+AGG - chr7_1:62071045-62071064 None:intergenic 20.0%
!!! TTTTAGAATTTTATGTGACT+AGG + chr7_1:62071060-62071079 Msa1028870:intron 20.0%
!! TACTATAATTAACATTGTTC+TGG + chr7_1:62071640-62071659 Msa1028870:intron 20.0%
!!! CATTCATTATCTTGTTTTTA+TGG + chr7_1:62071783-62071802 Msa1028870:intron 20.0%
!! CAAAATCTTATATTCCAATT+AGG - chr7_1:62073140-62073159 None:intergenic 20.0%
!! CAAAATAATGACAATAACAA+TGG - chr7_1:62073201-62073220 None:intergenic 20.0%
!!! CATTGTTATTGTCATTATTT+TGG + chr7_1:62073199-62073218 Msa1028870:three_prime_UTR 20.0%
!!! TTATTGTCATTATTTTGGAA+GGG + chr7_1:62073204-62073223 Msa1028870:three_prime_UTR 20.0%
! TTTATATTCATAGGATTCTC+TGG + chr7_1:62070121-62070140 Msa1028870:intron 25.0%
! ATTCAAATGAACAAAAAGAG+AGG - chr7_1:62070217-62070236 None:intergenic 25.0%
! ATTTGAATTGTTCATTCAAC+TGG + chr7_1:62070229-62070248 Msa1028870:intron 25.0%
! ACAACTAAAAAATTCTTCAC+TGG - chr7_1:62070519-62070538 None:intergenic 25.0%
! TGAATTGAATTTGTAGTGTT+TGG + chr7_1:62070743-62070762 Msa1028870:intron 25.0%
! GTAGTGTTTGGTAAAATTAT+CGG + chr7_1:62070755-62070774 Msa1028870:intron 25.0%
! ATTTATTATAGCAGCTCTTA+TGG + chr7_1:62071226-62071245 Msa1028870:CDS 25.0%
!! TAATATAGAGCACTATTTCT+TGG + chr7_1:62071409-62071428 Msa1028870:intron 25.0%
!!! TGCTTCTTTGAAATCAAATT+TGG - chr7_1:62071525-62071544 None:intergenic 25.0%
! CAAGATAATGAATGAAGATT+TGG - chr7_1:62071777-62071796 None:intergenic 25.0%
! AGACAAAGCTATAGTATAAA+TGG - chr7_1:62072025-62072044 None:intergenic 25.0%
! TATAGCATGTTTACAATTAC+AGG - chr7_1:62072300-62072319 None:intergenic 25.0%
! TTAAAGAAAAGAGTCAAACT+TGG + chr7_1:62072364-62072383 Msa1028870:intron 25.0%
!! AGAATTTGTTCTTGTTAACT+AGG + chr7_1:62072396-62072415 Msa1028870:intron 25.0%
!! GTCATTACCTCTAAAAATAT+GGG - chr7_1:62072490-62072509 None:intergenic 25.0%
!! TGTCATTACCTCTAAAAATA+TGG - chr7_1:62072491-62072510 None:intergenic 25.0%
!! TTGTCTTTGTTGTAGAATTT+GGG + chr7_1:62073082-62073101 Msa1028870:three_prime_UTR 25.0%
!!! GTTATTGTCATTATTTTGGA+AGG + chr7_1:62073203-62073222 Msa1028870:three_prime_UTR 25.0%
! ATTCCAAAATCCAAAAGTAA+GGG - chr7_1:62073276-62073295 None:intergenic 25.0%
! AATTCCAAAATCCAAAAGTA+AGG - chr7_1:62073277-62073296 None:intergenic 25.0%
!! TAGTCATGCATATCTTTTAA+AGG + chr7_1:62073335-62073354 Msa1028870:three_prime_UTR 25.0%
! ATCATTTAAATCGTGTTTGT+TGG - chr7_1:62073374-62073393 None:intergenic 25.0%
! TTTAAATGATGACTTTGACT+AGG + chr7_1:62073384-62073403 Msa1028870:three_prime_UTR 25.0%
! TTTATATTCATAGGATTCTC+TGG + chr7_1:62070121-62070140 Msa1028870:intron 25.0%
! ATTCAAATGAACAAAAAGAG+AGG - chr7_1:62070217-62070236 None:intergenic 25.0%
! ATTTGAATTGTTCATTCAAC+TGG + chr7_1:62070229-62070248 Msa1028870:intron 25.0%
! ACAACTAAAAAATTCTTCAC+TGG - chr7_1:62070519-62070538 None:intergenic 25.0%
! TGAATTGAATTTGTAGTGTT+TGG + chr7_1:62070743-62070762 Msa1028870:intron 25.0%
! GTAGTGTTTGGTAAAATTAT+CGG + chr7_1:62070755-62070774 Msa1028870:intron 25.0%
! ATTTATTATAGCAGCTCTTA+TGG + chr7_1:62071226-62071245 Msa1028870:CDS 25.0%
!! TAATATAGAGCACTATTTCT+TGG + chr7_1:62071409-62071428 Msa1028870:intron 25.0%
!!! TGCTTCTTTGAAATCAAATT+TGG - chr7_1:62071525-62071544 None:intergenic 25.0%
! CAAGATAATGAATGAAGATT+TGG - chr7_1:62071777-62071796 None:intergenic 25.0%
! AGACAAAGCTATAGTATAAA+TGG - chr7_1:62072025-62072044 None:intergenic 25.0%
! TATAGCATGTTTACAATTAC+AGG - chr7_1:62072300-62072319 None:intergenic 25.0%
! TTAAAGAAAAGAGTCAAACT+TGG + chr7_1:62072364-62072383 Msa1028870:intron 25.0%
!! AGAATTTGTTCTTGTTAACT+AGG + chr7_1:62072396-62072415 Msa1028870:intron 25.0%
!! GTCATTACCTCTAAAAATAT+GGG - chr7_1:62072490-62072509 None:intergenic 25.0%
!! TGTCATTACCTCTAAAAATA+TGG - chr7_1:62072491-62072510 None:intergenic 25.0%
!! TTGTCTTTGTTGTAGAATTT+GGG + chr7_1:62073082-62073101 Msa1028870:three_prime_UTR 25.0%
!!! GTTATTGTCATTATTTTGGA+AGG + chr7_1:62073203-62073222 Msa1028870:three_prime_UTR 25.0%
! ATTCCAAAATCCAAAAGTAA+GGG - chr7_1:62073276-62073295 None:intergenic 25.0%
! AATTCCAAAATCCAAAAGTA+AGG - chr7_1:62073277-62073296 None:intergenic 25.0%
!! TAGTCATGCATATCTTTTAA+AGG + chr7_1:62073335-62073354 Msa1028870:three_prime_UTR 25.0%
! ATCATTTAAATCGTGTTTGT+TGG - chr7_1:62073374-62073393 None:intergenic 25.0%
! TTTAAATGATGACTTTGACT+AGG + chr7_1:62073384-62073403 Msa1028870:three_prime_UTR 25.0%
TGAAAGTAGAACCAAAATCT+GGG - chr7_1:62069444-62069463 None:intergenic 30.0%
ATGAAAGTAGAACCAAAATC+TGG - chr7_1:62069445-62069464 None:intergenic 30.0%
TATTGTTTAGTTGTGACTTG+TGG + chr7_1:62069472-62069491 Msa1028870:five_prime_UTR 30.0%
!!! ATCTGGTTATGGTTTTGATA+CGG - chr7_1:62069784-62069803 None:intergenic 30.0%
ATTAGAAAGTAAGGTAGATC+CGG - chr7_1:62069814-62069833 None:intergenic 30.0%
TATAAACAAACACATTACGG+CGG - chr7_1:62070107-62070126 None:intergenic 30.0%
GAATGATATAGAGAATGGTT+CGG + chr7_1:62070291-62070310 Msa1028870:CDS 30.0%
TTTATGGAAAGAAAACGACT+AGG + chr7_1:62070630-62070649 Msa1028870:intron 30.0%
AAGTTCTTATGAGCTTGTAA+AGG + chr7_1:62070897-62070916 Msa1028870:intron 30.0%
TCTATTCTATGTTTGCGTTA+TGG + chr7_1:62071159-62071178 Msa1028870:intron 30.0%
!!! AACCTTTTTTCATGCTAGAT+TGG + chr7_1:62071194-62071213 Msa1028870:intron 30.0%
!!! ACCTTTTTTCATGCTAGATT+GGG + chr7_1:62071195-62071214 Msa1028870:intron 30.0%
AAGTGCCTTGATTATAATGA+CGG + chr7_1:62071289-62071308 Msa1028870:CDS 30.0%
ACTTACCGTCATTATAATCA+AGG - chr7_1:62071297-62071316 None:intergenic 30.0%
ATTAATGAGAACAGAAAAGC+AGG - chr7_1:62071348-62071367 None:intergenic 30.0%
! TGCTTTTCTGTTCTCATTAA+TGG + chr7_1:62071347-62071366 Msa1028870:intron 30.0%
!!! TTTTTTACATTGTGCTGTGA+TGG + chr7_1:62071374-62071393 Msa1028870:intron 30.0%
GTTATTTGTTTGTGTCCATT+AGG + chr7_1:62071470-62071489 Msa1028870:intron 30.0%
! AAAAGTACATGGAGTTAAAC+AGG - chr7_1:62071670-62071689 None:intergenic 30.0%
! AAACGTGTAACAAAAGTACA+TGG - chr7_1:62071681-62071700 None:intergenic 30.0%
GCGTATGACAAAAAAATGAT+AGG - chr7_1:62071861-62071880 None:intergenic 30.0%
! GCAGTTCTTTATCTTTTCTT+CGG + chr7_1:62071879-62071898 Msa1028870:intron 30.0%
! CAGTTCTTTATCTTTTCTTC+GGG + chr7_1:62071880-62071899 Msa1028870:intron 30.0%
! TCTTTCTTCTGTGAAGATTT+TGG - chr7_1:62071939-62071958 None:intergenic 30.0%
ATCTTCACAGAAGAAAGAAA+TGG + chr7_1:62071941-62071960 Msa1028870:CDS 30.0%
! ATCTAGAATAAAGGAACTTG+AGG - chr7_1:62072075-62072094 None:intergenic 30.0%
TCAAGTTCCTTTATTCTAGA+TGG + chr7_1:62072074-62072093 Msa1028870:intron 30.0%
! AAATGTGCCATCTAGAATAA+AGG - chr7_1:62072084-62072103 None:intergenic 30.0%
TAATATAGATGCAACTCTTC+AGG + chr7_1:62072197-62072216 Msa1028870:intron 30.0%
!! ATTGTTGATGACACATTAGT+TGG + chr7_1:62072335-62072354 Msa1028870:intron 30.0%
! TAGGTTGAAGAAAAACTTGA+AGG + chr7_1:62072415-62072434 Msa1028870:intron 30.0%
!!! TTGTACACCCATATTTTTAG+AGG + chr7_1:62072480-62072499 Msa1028870:CDS 30.0%
TAACCACCGACAAAAATTAA+AGG - chr7_1:62072730-62072749 None:intergenic 30.0%
GCAACACATAAAAATGCAAT+CGG + chr7_1:62072813-62072832 Msa1028870:CDS 30.0%
AGCACTTGTATTAATCTAGA+GGG - chr7_1:62072992-62073011 None:intergenic 30.0%
! GTTGTCTTTGTTGTAGAATT+TGG + chr7_1:62073081-62073100 Msa1028870:three_prime_UTR 30.0%
TGCATGACTATCTATTGAAA+TGG - chr7_1:62073325-62073344 None:intergenic 30.0%
!! TCATGCATATCTTTTAAAGG+TGG + chr7_1:62073338-62073357 Msa1028870:three_prime_UTR 30.0%
TGAAAGTAGAACCAAAATCT+GGG - chr7_1:62069444-62069463 None:intergenic 30.0%
ATGAAAGTAGAACCAAAATC+TGG - chr7_1:62069445-62069464 None:intergenic 30.0%
TATTGTTTAGTTGTGACTTG+TGG + chr7_1:62069472-62069491 Msa1028870:five_prime_UTR 30.0%
!!! ATCTGGTTATGGTTTTGATA+CGG - chr7_1:62069784-62069803 None:intergenic 30.0%
ATTAGAAAGTAAGGTAGATC+CGG - chr7_1:62069814-62069833 None:intergenic 30.0%
TATAAACAAACACATTACGG+CGG - chr7_1:62070107-62070126 None:intergenic 30.0%
GAATGATATAGAGAATGGTT+CGG + chr7_1:62070291-62070310 Msa1028870:CDS 30.0%
TTTATGGAAAGAAAACGACT+AGG + chr7_1:62070630-62070649 Msa1028870:intron 30.0%
AAGTTCTTATGAGCTTGTAA+AGG + chr7_1:62070897-62070916 Msa1028870:intron 30.0%
TCTATTCTATGTTTGCGTTA+TGG + chr7_1:62071159-62071178 Msa1028870:intron 30.0%
!!! AACCTTTTTTCATGCTAGAT+TGG + chr7_1:62071194-62071213 Msa1028870:intron 30.0%
!!! ACCTTTTTTCATGCTAGATT+GGG + chr7_1:62071195-62071214 Msa1028870:intron 30.0%
AAGTGCCTTGATTATAATGA+CGG + chr7_1:62071289-62071308 Msa1028870:CDS 30.0%
ACTTACCGTCATTATAATCA+AGG - chr7_1:62071297-62071316 None:intergenic 30.0%
ATTAATGAGAACAGAAAAGC+AGG - chr7_1:62071348-62071367 None:intergenic 30.0%
! TGCTTTTCTGTTCTCATTAA+TGG + chr7_1:62071347-62071366 Msa1028870:intron 30.0%
!!! TTTTTTACATTGTGCTGTGA+TGG + chr7_1:62071374-62071393 Msa1028870:intron 30.0%
GTTATTTGTTTGTGTCCATT+AGG + chr7_1:62071470-62071489 Msa1028870:intron 30.0%
! AAAAGTACATGGAGTTAAAC+AGG - chr7_1:62071670-62071689 None:intergenic 30.0%
! AAACGTGTAACAAAAGTACA+TGG - chr7_1:62071681-62071700 None:intergenic 30.0%
GCGTATGACAAAAAAATGAT+AGG - chr7_1:62071861-62071880 None:intergenic 30.0%
! GCAGTTCTTTATCTTTTCTT+CGG + chr7_1:62071879-62071898 Msa1028870:intron 30.0%
! CAGTTCTTTATCTTTTCTTC+GGG + chr7_1:62071880-62071899 Msa1028870:intron 30.0%
! TCTTTCTTCTGTGAAGATTT+TGG - chr7_1:62071939-62071958 None:intergenic 30.0%
ATCTTCACAGAAGAAAGAAA+TGG + chr7_1:62071941-62071960 Msa1028870:CDS 30.0%
! ATCTAGAATAAAGGAACTTG+AGG - chr7_1:62072075-62072094 None:intergenic 30.0%
TCAAGTTCCTTTATTCTAGA+TGG + chr7_1:62072074-62072093 Msa1028870:intron 30.0%
! AAATGTGCCATCTAGAATAA+AGG - chr7_1:62072084-62072103 None:intergenic 30.0%
TAATATAGATGCAACTCTTC+AGG + chr7_1:62072197-62072216 Msa1028870:intron 30.0%
!! ATTGTTGATGACACATTAGT+TGG + chr7_1:62072335-62072354 Msa1028870:intron 30.0%
! TAGGTTGAAGAAAAACTTGA+AGG + chr7_1:62072415-62072434 Msa1028870:intron 30.0%
!!! TTGTACACCCATATTTTTAG+AGG + chr7_1:62072480-62072499 Msa1028870:CDS 30.0%
TAACCACCGACAAAAATTAA+AGG - chr7_1:62072730-62072749 None:intergenic 30.0%
GCAACACATAAAAATGCAAT+CGG + chr7_1:62072813-62072832 Msa1028870:CDS 30.0%
AGCACTTGTATTAATCTAGA+GGG - chr7_1:62072992-62073011 None:intergenic 30.0%
! GTTGTCTTTGTTGTAGAATT+TGG + chr7_1:62073081-62073100 Msa1028870:three_prime_UTR 30.0%
TGCATGACTATCTATTGAAA+TGG - chr7_1:62073325-62073344 None:intergenic 30.0%
!! TCATGCATATCTTTTAAAGG+TGG + chr7_1:62073338-62073357 Msa1028870:three_prime_UTR 30.0%
TGAAATTGAGAGAGAGAACA+AGG - chr7_1:62069369-62069388 None:intergenic 35.0%
!! ACAACTTAACTTGGTTTGTG+CGG - chr7_1:62069544-62069563 None:intergenic 35.0%
! CACAAACCAAGTTAAGTTGT+GGG + chr7_1:62069544-62069563 Msa1028870:five_prime_UTR 35.0%
TTCATCCATATTGCCAAGTT+CGG + chr7_1:62069598-62069617 Msa1028870:five_prime_UTR 35.0%
!!! TTTTTTCTAGGACTGAGCAA+CGG - chr7_1:62069646-62069665 None:intergenic 35.0%
GTGAATTGAATTGAAGGTGA+TGG - chr7_1:62069739-62069758 None:intergenic 35.0%
GATTGCGTGAATTGAATTGA+AGG - chr7_1:62069745-62069764 None:intergenic 35.0%
ATAAACAAACACATTACGGC+GGG - chr7_1:62070106-62070125 None:intergenic 35.0%
GCGTTGAATGATATAGAGAA+TGG + chr7_1:62070286-62070305 Msa1028870:CDS 35.0%
ATCAATGATTCTCGTTAGTG+AGG + chr7_1:62070375-62070394 Msa1028870:CDS 35.0%
AGCATGACGAATTTAGTTAG+AGG + chr7_1:62070552-62070571 Msa1028870:intron 35.0%
TAGTTAGAGGAAGCTCAAAT+TGG + chr7_1:62070565-62070584 Msa1028870:intron 35.0%
! AATTTTATGTGACTAGGCTC+AGG + chr7_1:62071066-62071085 Msa1028870:intron 35.0%
!!! CCTTTTTTCATGCTAGATTG+GGG + chr7_1:62071196-62071215 Msa1028870:intron 35.0%
! ATCTCGATGTTGTTGATAGA+AGG - chr7_1:62071446-62071465 None:intergenic 35.0%
TGTGCATTCTGGATTCATAA+TGG + chr7_1:62071585-62071604 Msa1028870:intron 35.0%
ATTATAGTAGCTTTCGTCAC+AGG - chr7_1:62071629-62071648 None:intergenic 35.0%
AAATGGAGAGAATTGAACTG+TGG - chr7_1:62072008-62072027 None:intergenic 35.0%
!! CTATAGCTTTGTCTTTGTAC+AGG + chr7_1:62072031-62072050 Msa1028870:intron 35.0%
AACAGTTACTGTATTTGTGC+TGG + chr7_1:62072108-62072127 Msa1028870:intron 35.0%
ACATATTTAAACAGCCATCG+AGG - chr7_1:62072162-62072181 None:intergenic 35.0%
TAAACATGCTATAGCATGCA+GGG + chr7_1:62072307-62072326 Msa1028870:intron 35.0%
GTTGAAGAAAAACTTGAAGG+TGG + chr7_1:62072418-62072437 Msa1028870:CDS 35.0%
AAAAACTTGAAGGTGGACAA+GGG + chr7_1:62072425-62072444 Msa1028870:CDS 35.0%
GACAAGGGAAAACTTCATTT+CGG + chr7_1:62072440-62072459 Msa1028870:CDS 35.0%
! TTTTAACATTCCTTGCTGAG+TGG + chr7_1:62072589-62072608 Msa1028870:CDS 35.0%
TTTAACATTCCTTGCTGAGT+GGG + chr7_1:62072590-62072609 Msa1028870:CDS 35.0%
CTGGAGACATAAAATCGATA+AGG - chr7_1:62072707-62072726 None:intergenic 35.0%
!! CTCCAGCCTTTAATTTTTGT+CGG + chr7_1:62072721-62072740 Msa1028870:intron 35.0%
ATGAAGACAAAGAAAAGCCT+AGG - chr7_1:62072959-62072978 None:intergenic 35.0%
ACTTGTATTAATCTAGAGGG+GGG - chr7_1:62072989-62073008 None:intergenic 35.0%
CACTTGTATTAATCTAGAGG+GGG - chr7_1:62072990-62073009 None:intergenic 35.0%
GCACTTGTATTAATCTAGAG+GGG - chr7_1:62072991-62073010 None:intergenic 35.0%
CAGCACTTGTATTAATCTAG+AGG - chr7_1:62072993-62073012 None:intergenic 35.0%
CTCTAGATTAATACAAGTGC+TGG + chr7_1:62072991-62073010 Msa1028870:exon 35.0%
!! AGATTAATACAAGTGCTGGT+TGG + chr7_1:62072995-62073014 Msa1028870:exon 35.0%
ATTAGGATCGAACTTTCCTA+GGG - chr7_1:62073123-62073142 None:intergenic 35.0%
AATTAGGATCGAACTTTCCT+AGG - chr7_1:62073124-62073143 None:intergenic 35.0%
TAGGAAAGTTCGATCCTAAT+TGG + chr7_1:62073123-62073142 Msa1028870:three_prime_UTR 35.0%
! TTTGAAGACTCCCTTACTTT+TGG + chr7_1:62073263-62073282 Msa1028870:three_prime_UTR 35.0%
!! ACTCCCTTACTTTTGGATTT+TGG + chr7_1:62073270-62073289 Msa1028870:three_prime_UTR 35.0%
AGCACGTTAAAACTGTAATG+TGG + chr7_1:62073298-62073317 Msa1028870:three_prime_UTR 35.0%
!! GCATATCTTTTAAAGGTGGA+CGG + chr7_1:62073342-62073361 Msa1028870:three_prime_UTR 35.0%
TGAAATTGAGAGAGAGAACA+AGG - chr7_1:62069369-62069388 None:intergenic 35.0%
!! ACAACTTAACTTGGTTTGTG+CGG - chr7_1:62069544-62069563 None:intergenic 35.0%
! CACAAACCAAGTTAAGTTGT+GGG + chr7_1:62069544-62069563 Msa1028870:five_prime_UTR 35.0%
TTCATCCATATTGCCAAGTT+CGG + chr7_1:62069598-62069617 Msa1028870:five_prime_UTR 35.0%
!!! TTTTTTCTAGGACTGAGCAA+CGG - chr7_1:62069646-62069665 None:intergenic 35.0%
GTGAATTGAATTGAAGGTGA+TGG - chr7_1:62069739-62069758 None:intergenic 35.0%
GATTGCGTGAATTGAATTGA+AGG - chr7_1:62069745-62069764 None:intergenic 35.0%
ATAAACAAACACATTACGGC+GGG - chr7_1:62070106-62070125 None:intergenic 35.0%
GCGTTGAATGATATAGAGAA+TGG + chr7_1:62070286-62070305 Msa1028870:CDS 35.0%
ATCAATGATTCTCGTTAGTG+AGG + chr7_1:62070375-62070394 Msa1028870:CDS 35.0%
AGCATGACGAATTTAGTTAG+AGG + chr7_1:62070552-62070571 Msa1028870:intron 35.0%
TAGTTAGAGGAAGCTCAAAT+TGG + chr7_1:62070565-62070584 Msa1028870:intron 35.0%
! AATTTTATGTGACTAGGCTC+AGG + chr7_1:62071066-62071085 Msa1028870:intron 35.0%
!!! CCTTTTTTCATGCTAGATTG+GGG + chr7_1:62071196-62071215 Msa1028870:intron 35.0%
! ATCTCGATGTTGTTGATAGA+AGG - chr7_1:62071446-62071465 None:intergenic 35.0%
TGTGCATTCTGGATTCATAA+TGG + chr7_1:62071585-62071604 Msa1028870:intron 35.0%
ATTATAGTAGCTTTCGTCAC+AGG - chr7_1:62071629-62071648 None:intergenic 35.0%
AAATGGAGAGAATTGAACTG+TGG - chr7_1:62072008-62072027 None:intergenic 35.0%
!! CTATAGCTTTGTCTTTGTAC+AGG + chr7_1:62072031-62072050 Msa1028870:intron 35.0%
AACAGTTACTGTATTTGTGC+TGG + chr7_1:62072108-62072127 Msa1028870:intron 35.0%
ACATATTTAAACAGCCATCG+AGG - chr7_1:62072162-62072181 None:intergenic 35.0%
TAAACATGCTATAGCATGCA+GGG + chr7_1:62072307-62072326 Msa1028870:intron 35.0%
GTTGAAGAAAAACTTGAAGG+TGG + chr7_1:62072418-62072437 Msa1028870:CDS 35.0%
AAAAACTTGAAGGTGGACAA+GGG + chr7_1:62072425-62072444 Msa1028870:CDS 35.0%
GACAAGGGAAAACTTCATTT+CGG + chr7_1:62072440-62072459 Msa1028870:CDS 35.0%
! TTTTAACATTCCTTGCTGAG+TGG + chr7_1:62072589-62072608 Msa1028870:CDS 35.0%
TTTAACATTCCTTGCTGAGT+GGG + chr7_1:62072590-62072609 Msa1028870:CDS 35.0%
CTGGAGACATAAAATCGATA+AGG - chr7_1:62072707-62072726 None:intergenic 35.0%
!! CTCCAGCCTTTAATTTTTGT+CGG + chr7_1:62072721-62072740 Msa1028870:intron 35.0%
ATGAAGACAAAGAAAAGCCT+AGG - chr7_1:62072959-62072978 None:intergenic 35.0%
ACTTGTATTAATCTAGAGGG+GGG - chr7_1:62072989-62073008 None:intergenic 35.0%
CACTTGTATTAATCTAGAGG+GGG - chr7_1:62072990-62073009 None:intergenic 35.0%
GCACTTGTATTAATCTAGAG+GGG - chr7_1:62072991-62073010 None:intergenic 35.0%
CAGCACTTGTATTAATCTAG+AGG - chr7_1:62072993-62073012 None:intergenic 35.0%
CTCTAGATTAATACAAGTGC+TGG + chr7_1:62072991-62073010 Msa1028870:exon 35.0%
!! AGATTAATACAAGTGCTGGT+TGG + chr7_1:62072995-62073014 Msa1028870:exon 35.0%
ATTAGGATCGAACTTTCCTA+GGG - chr7_1:62073123-62073142 None:intergenic 35.0%
AATTAGGATCGAACTTTCCT+AGG - chr7_1:62073124-62073143 None:intergenic 35.0%
TAGGAAAGTTCGATCCTAAT+TGG + chr7_1:62073123-62073142 Msa1028870:three_prime_UTR 35.0%
! TTTGAAGACTCCCTTACTTT+TGG + chr7_1:62073263-62073282 Msa1028870:three_prime_UTR 35.0%
!! ACTCCCTTACTTTTGGATTT+TGG + chr7_1:62073270-62073289 Msa1028870:three_prime_UTR 35.0%
AGCACGTTAAAACTGTAATG+TGG + chr7_1:62073298-62073317 Msa1028870:three_prime_UTR 35.0%
!! GCATATCTTTTAAAGGTGGA+CGG + chr7_1:62073342-62073361 Msa1028870:three_prime_UTR 35.0%
!! CAACTTAACTTGGTTTGTGC+GGG - chr7_1:62069543-62069562 None:intergenic 40.0%
! GCACAAACCAAGTTAAGTTG+TGG + chr7_1:62069543-62069562 Msa1028870:five_prime_UTR 40.0%
! AAACCAAGTTAAGTTGTGGG+CGG + chr7_1:62069547-62069566 Msa1028870:five_prime_UTR 40.0%
TCATCCATATTGCCAAGTTC+GGG + chr7_1:62069599-62069618 Msa1028870:five_prime_UTR 40.0%
AAAGTAGCAACAACCGTGTT+TGG + chr7_1:62069688-62069707 Msa1028870:five_prime_UTR 40.0%
AAGTAGCAACAACCGTGTTT+GGG + chr7_1:62069689-62069708 Msa1028870:five_prime_UTR 40.0%
GCACTACGATTCAACATCAA+TGG + chr7_1:62069979-62069998 Msa1028870:CDS 40.0%
TGAAAACGCGTAGAATGGAA+GGG - chr7_1:62070073-62070092 None:intergenic 40.0%
ATGAAAACGCGTAGAATGGA+AGG - chr7_1:62070074-62070093 None:intergenic 40.0%
ATGCATGAAAACGCGTAGAA+TGG - chr7_1:62070078-62070097 None:intergenic 40.0%
TAAACAAACACATTACGGCG+GGG - chr7_1:62070105-62070124 None:intergenic 40.0%
GAGGTTAGAGATGCTTACTT+TGG - chr7_1:62070198-62070217 None:intergenic 40.0%
! TGCGAGTGATTTTTGTGAAC+AGG + chr7_1:62070261-62070280 Msa1028870:intron 40.0%
TTCGGTCATTTCTCTTAGCT+TGG + chr7_1:62070309-62070328 Msa1028870:CDS 40.0%
! TCTCTTAGCTTGGATTCTTC+TGG + chr7_1:62070319-62070338 Msa1028870:CDS 40.0%
! ATCAGTGAAAGTGTGCGATA+CGG + chr7_1:62070592-62070611 Msa1028870:intron 40.0%
GAGTCAATGTGACGCATTTA+TGG + chr7_1:62070614-62070633 Msa1028870:intron 40.0%
ACGACTAGGCGTTATTGTTA+AGG + chr7_1:62070644-62070663 Msa1028870:intron 40.0%
CGACTAGGCGTTATTGTTAA+GGG + chr7_1:62070645-62070664 Msa1028870:intron 40.0%
!! GCGTTATTGTTAAGGGTGTT+TGG + chr7_1:62070652-62070671 Msa1028870:intron 40.0%
GGGTGTTTGGTAAAAAGTAG+TGG + chr7_1:62070665-62070684 Msa1028870:intron 40.0%
CCCCAATCTAGCATGAAAAA+AGG - chr7_1:62071199-62071218 None:intergenic 40.0%
! CCAGACAAGACAATTGACTT+AGG - chr7_1:62071263-62071282 None:intergenic 40.0%
CCTAAGTCAATTGTCTTGTC+TGG + chr7_1:62071260-62071279 Msa1028870:CDS 40.0%
GTCCATTAGGTACTTTCTAC+AGG + chr7_1:62071483-62071502 Msa1028870:intron 40.0%
!! GTCCTGTAGAAAGTACCTAA+TGG - chr7_1:62071488-62071507 None:intergenic 40.0%
TAGGTACTTTCTACAGGACT+AGG + chr7_1:62071489-62071508 Msa1028870:intron 40.0%
TACTTTCTACAGGACTAGGA+AGG + chr7_1:62071493-62071512 Msa1028870:CDS 40.0%
! CATACAAATAGTGCTGCTAC+AGG + chr7_1:62071543-62071562 Msa1028870:CDS 40.0%
GCTGCTACAGGTAAACTTAT+CGG + chr7_1:62071555-62071574 Msa1028870:intron 40.0%
ATAATGGCTGAGTATGCACT+CGG + chr7_1:62071601-62071620 Msa1028870:intron 40.0%
TTCTATCTATGCCTTGCTTC+TGG + chr7_1:62071728-62071747 Msa1028870:intron 40.0%
TTAATTGAGCTCTGCTCTCA+TGG - chr7_1:62072274-62072293 None:intergenic 40.0%
GTAAACATGCTATAGCATGC+AGG + chr7_1:62072306-62072325 Msa1028870:intron 40.0%
GAAAAACTTGAAGGTGGACA+AGG + chr7_1:62072424-62072443 Msa1028870:CDS 40.0%
AAGGGAAAACTTCATTTCGG+CGG + chr7_1:62072443-62072462 Msa1028870:CDS 40.0%
TTAACATTCCTTGCTGAGTG+GGG + chr7_1:62072591-62072610 Msa1028870:CDS 40.0%
TTACTGCAATTGTCGCAATC+TGG - chr7_1:62072626-62072645 None:intergenic 40.0%
!! TAGGGTGTTGAGTTAAGAGA+TGG - chr7_1:62072653-62072672 None:intergenic 40.0%
CACCGACAAAAATTAAAGGC+TGG - chr7_1:62072726-62072745 None:intergenic 40.0%
!! CAGCCTTTAATTTTTGTCGG+TGG + chr7_1:62072724-62072743 Msa1028870:intron 40.0%
CTTCAAAGTTCAACGATGTG+TGG - chr7_1:62073250-62073269 None:intergenic 40.0%
!! CAACTTAACTTGGTTTGTGC+GGG - chr7_1:62069543-62069562 None:intergenic 40.0%
! GCACAAACCAAGTTAAGTTG+TGG + chr7_1:62069543-62069562 Msa1028870:five_prime_UTR 40.0%
! AAACCAAGTTAAGTTGTGGG+CGG + chr7_1:62069547-62069566 Msa1028870:five_prime_UTR 40.0%
TCATCCATATTGCCAAGTTC+GGG + chr7_1:62069599-62069618 Msa1028870:five_prime_UTR 40.0%
AAAGTAGCAACAACCGTGTT+TGG + chr7_1:62069688-62069707 Msa1028870:five_prime_UTR 40.0%
AAGTAGCAACAACCGTGTTT+GGG + chr7_1:62069689-62069708 Msa1028870:five_prime_UTR 40.0%
GCACTACGATTCAACATCAA+TGG + chr7_1:62069979-62069998 Msa1028870:CDS 40.0%
TGAAAACGCGTAGAATGGAA+GGG - chr7_1:62070073-62070092 None:intergenic 40.0%
ATGAAAACGCGTAGAATGGA+AGG - chr7_1:62070074-62070093 None:intergenic 40.0%
ATGCATGAAAACGCGTAGAA+TGG - chr7_1:62070078-62070097 None:intergenic 40.0%
TAAACAAACACATTACGGCG+GGG - chr7_1:62070105-62070124 None:intergenic 40.0%
GAGGTTAGAGATGCTTACTT+TGG - chr7_1:62070198-62070217 None:intergenic 40.0%
! TGCGAGTGATTTTTGTGAAC+AGG + chr7_1:62070261-62070280 Msa1028870:intron 40.0%
TTCGGTCATTTCTCTTAGCT+TGG + chr7_1:62070309-62070328 Msa1028870:CDS 40.0%
! TCTCTTAGCTTGGATTCTTC+TGG + chr7_1:62070319-62070338 Msa1028870:CDS 40.0%
! ATCAGTGAAAGTGTGCGATA+CGG + chr7_1:62070592-62070611 Msa1028870:intron 40.0%
GAGTCAATGTGACGCATTTA+TGG + chr7_1:62070614-62070633 Msa1028870:intron 40.0%
ACGACTAGGCGTTATTGTTA+AGG + chr7_1:62070644-62070663 Msa1028870:intron 40.0%
CGACTAGGCGTTATTGTTAA+GGG + chr7_1:62070645-62070664 Msa1028870:intron 40.0%
!! GCGTTATTGTTAAGGGTGTT+TGG + chr7_1:62070652-62070671 Msa1028870:intron 40.0%
GGGTGTTTGGTAAAAAGTAG+TGG + chr7_1:62070665-62070684 Msa1028870:intron 40.0%
CCCCAATCTAGCATGAAAAA+AGG - chr7_1:62071199-62071218 None:intergenic 40.0%
! CCAGACAAGACAATTGACTT+AGG - chr7_1:62071263-62071282 None:intergenic 40.0%
CCTAAGTCAATTGTCTTGTC+TGG + chr7_1:62071260-62071279 Msa1028870:CDS 40.0%
GTCCATTAGGTACTTTCTAC+AGG + chr7_1:62071483-62071502 Msa1028870:intron 40.0%
!! GTCCTGTAGAAAGTACCTAA+TGG - chr7_1:62071488-62071507 None:intergenic 40.0%
TAGGTACTTTCTACAGGACT+AGG + chr7_1:62071489-62071508 Msa1028870:intron 40.0%
TACTTTCTACAGGACTAGGA+AGG + chr7_1:62071493-62071512 Msa1028870:CDS 40.0%
! CATACAAATAGTGCTGCTAC+AGG + chr7_1:62071543-62071562 Msa1028870:CDS 40.0%
GCTGCTACAGGTAAACTTAT+CGG + chr7_1:62071555-62071574 Msa1028870:intron 40.0%
ATAATGGCTGAGTATGCACT+CGG + chr7_1:62071601-62071620 Msa1028870:intron 40.0%
TTCTATCTATGCCTTGCTTC+TGG + chr7_1:62071728-62071747 Msa1028870:intron 40.0%
TTAATTGAGCTCTGCTCTCA+TGG - chr7_1:62072274-62072293 None:intergenic 40.0%
GTAAACATGCTATAGCATGC+AGG + chr7_1:62072306-62072325 Msa1028870:intron 40.0%
GAAAAACTTGAAGGTGGACA+AGG + chr7_1:62072424-62072443 Msa1028870:CDS 40.0%
AAGGGAAAACTTCATTTCGG+CGG + chr7_1:62072443-62072462 Msa1028870:CDS 40.0%
TTAACATTCCTTGCTGAGTG+GGG + chr7_1:62072591-62072610 Msa1028870:CDS 40.0%
TTACTGCAATTGTCGCAATC+TGG - chr7_1:62072626-62072645 None:intergenic 40.0%
!! TAGGGTGTTGAGTTAAGAGA+TGG - chr7_1:62072653-62072672 None:intergenic 40.0%
CACCGACAAAAATTAAAGGC+TGG - chr7_1:62072726-62072745 None:intergenic 40.0%
!! CAGCCTTTAATTTTTGTCGG+TGG + chr7_1:62072724-62072743 Msa1028870:intron 40.0%
CTTCAAAGTTCAACGATGTG+TGG - chr7_1:62073250-62073269 None:intergenic 40.0%
GCGGAAGTGGTTCTTGAAAT+GGG + chr7_1:62069566-62069585 Msa1028870:five_prime_UTR 45.0%
CGGAAGTGGTTCTTGAAATG+GGG + chr7_1:62069567-62069586 Msa1028870:five_prime_UTR 45.0%
GGAAGTGGTTCTTGAAATGG+GGG + chr7_1:62069568-62069587 Msa1028870:five_prime_UTR 45.0%
AGTAGCAACAACCGTGTTTG+GGG + chr7_1:62069690-62069709 Msa1028870:five_prime_UTR 45.0%
AGTAAGGTAGATCCGGTAGT+GGG - chr7_1:62069807-62069826 None:intergenic 45.0%
AAGTAAGGTAGATCCGGTAG+TGG - chr7_1:62069808-62069827 None:intergenic 45.0%
GATGTTGAATCGTAGTGCCA+TGG - chr7_1:62069977-62069996 None:intergenic 45.0%
GCAGAGGAGAAGAACGAAAA+CGG - chr7_1:62070013-62070032 None:intergenic 45.0%
TAGAGATGCTTACTTTGGCG+CGG - chr7_1:62070193-62070212 None:intergenic 45.0%
AGCTTGGATTCTTCTGGTGT+TGG + chr7_1:62070325-62070344 Msa1028870:CDS 45.0%
!!! GTGCTGTGATGGACTGATTT+TGG + chr7_1:62071385-62071404 Msa1028870:intron 45.0%
ATCAGTGAACTCCAGAAGCA+AGG - chr7_1:62071742-62071761 None:intergenic 45.0%
TACGACTGCTGTACATTGCT+TGG + chr7_1:62071904-62071923 Msa1028870:CDS 45.0%
! ATACTGACTAGTGACCTCGA+TGG + chr7_1:62072145-62072164 Msa1028870:intron 45.0%
AGTTTCCTTGTTACTCCACC+TGG + chr7_1:62072241-62072260 Msa1028870:intron 45.0%
CAATTGTCGCAATCTGGCTA+CGG - chr7_1:62072620-62072639 None:intergenic 45.0%
CAGCTGCACAAGGAAATTGA+AGG - chr7_1:62072793-62072812 None:intergenic 45.0%
CTTCAATTTCCTTGTGCAGC+TGG + chr7_1:62072791-62072810 Msa1028870:intron 45.0%
ACATATTGTGTGCCCTATGG+TGG - chr7_1:62072853-62072872 None:intergenic 45.0%
GGTACATATTGTGTGCCCTA+TGG - chr7_1:62072856-62072875 None:intergenic 45.0%
GCACACAATATGTACCTCAG+TGG + chr7_1:62072860-62072879 Msa1028870:CDS 45.0%
AATATGTACCTCAGTGGCAG+TGG + chr7_1:62072866-62072885 Msa1028870:CDS 45.0%
GTTGTATCTACCTACTCCCT+AGG + chr7_1:62073104-62073123 Msa1028870:three_prime_UTR 45.0%
ATCGAACTTTCCTAGGGAGT+AGG - chr7_1:62073117-62073136 None:intergenic 45.0%
TCAACGATGTGTGGAGAGAA+GGG - chr7_1:62073241-62073260 None:intergenic 45.0%
TTCAACGATGTGTGGAGAGA+AGG - chr7_1:62073242-62073261 None:intergenic 45.0%
GCGGAAGTGGTTCTTGAAAT+GGG + chr7_1:62069566-62069585 Msa1028870:five_prime_UTR 45.0%
CGGAAGTGGTTCTTGAAATG+GGG + chr7_1:62069567-62069586 Msa1028870:five_prime_UTR 45.0%
GGAAGTGGTTCTTGAAATGG+GGG + chr7_1:62069568-62069587 Msa1028870:five_prime_UTR 45.0%
AGTAGCAACAACCGTGTTTG+GGG + chr7_1:62069690-62069709 Msa1028870:five_prime_UTR 45.0%
AGTAAGGTAGATCCGGTAGT+GGG - chr7_1:62069807-62069826 None:intergenic 45.0%
AAGTAAGGTAGATCCGGTAG+TGG - chr7_1:62069808-62069827 None:intergenic 45.0%
GATGTTGAATCGTAGTGCCA+TGG - chr7_1:62069977-62069996 None:intergenic 45.0%
GCAGAGGAGAAGAACGAAAA+CGG - chr7_1:62070013-62070032 None:intergenic 45.0%
TAGAGATGCTTACTTTGGCG+CGG - chr7_1:62070193-62070212 None:intergenic 45.0%
AGCTTGGATTCTTCTGGTGT+TGG + chr7_1:62070325-62070344 Msa1028870:CDS 45.0%
!!! GTGCTGTGATGGACTGATTT+TGG + chr7_1:62071385-62071404 Msa1028870:intron 45.0%
ATCAGTGAACTCCAGAAGCA+AGG - chr7_1:62071742-62071761 None:intergenic 45.0%
TACGACTGCTGTACATTGCT+TGG + chr7_1:62071904-62071923 Msa1028870:CDS 45.0%
! ATACTGACTAGTGACCTCGA+TGG + chr7_1:62072145-62072164 Msa1028870:intron 45.0%
AGTTTCCTTGTTACTCCACC+TGG + chr7_1:62072241-62072260 Msa1028870:intron 45.0%
CAATTGTCGCAATCTGGCTA+CGG - chr7_1:62072620-62072639 None:intergenic 45.0%
CAGCTGCACAAGGAAATTGA+AGG - chr7_1:62072793-62072812 None:intergenic 45.0%
CTTCAATTTCCTTGTGCAGC+TGG + chr7_1:62072791-62072810 Msa1028870:intron 45.0%
ACATATTGTGTGCCCTATGG+TGG - chr7_1:62072853-62072872 None:intergenic 45.0%
GGTACATATTGTGTGCCCTA+TGG - chr7_1:62072856-62072875 None:intergenic 45.0%
GCACACAATATGTACCTCAG+TGG + chr7_1:62072860-62072879 Msa1028870:CDS 45.0%
AATATGTACCTCAGTGGCAG+TGG + chr7_1:62072866-62072885 Msa1028870:CDS 45.0%
GTTGTATCTACCTACTCCCT+AGG + chr7_1:62073104-62073123 Msa1028870:three_prime_UTR 45.0%
ATCGAACTTTCCTAGGGAGT+AGG - chr7_1:62073117-62073136 None:intergenic 45.0%
TCAACGATGTGTGGAGAGAA+GGG - chr7_1:62073241-62073260 None:intergenic 45.0%
TTCAACGATGTGTGGAGAGA+AGG - chr7_1:62073242-62073261 None:intergenic 45.0%
! AGCAGCTTCAGCCCAGATTT+TGG + chr7_1:62069430-62069449 Msa1028870:five_prime_UTR 50.0%
!! AACTTGGTTTGTGCGGGTCT+CGG - chr7_1:62069537-62069556 None:intergenic 50.0%
CTTCCGCCCACAACTTAACT+TGG - chr7_1:62069553-62069572 None:intergenic 50.0%
! AGTTAAGTTGTGGGCGGAAG+TGG + chr7_1:62069553-62069572 Msa1028870:five_prime_UTR 50.0%
GGCGGAAGTGGTTCTTGAAA+TGG + chr7_1:62069565-62069584 Msa1028870:five_prime_UTR 50.0%
GGTTCTTGAAATGGGGGCTT+CGG + chr7_1:62069574-62069593 Msa1028870:five_prime_UTR 50.0%
!! TTCTAGGACTGAGCAACGGT+CGG - chr7_1:62069642-62069661 None:intergenic 50.0%
CGATGCAAGATCCCCAAACA+CGG - chr7_1:62069704-62069723 None:intergenic 50.0%
GTTTGGGGATCTTGCATCGA+AGG + chr7_1:62069705-62069724 Msa1028870:five_prime_UTR 50.0%
CCATAACCAGATCCCACTAC+CGG + chr7_1:62069792-62069811 Msa1028870:five_prime_UTR 50.0%
TGTGGCGGTTGAATTTGCGA+GGG - chr7_1:62069948-62069967 None:intergenic 50.0%
GTAGTGCCATGGTGAATCTG+TGG - chr7_1:62069966-62069985 None:intergenic 50.0%
AGGTTTGAACGACGAAGCAG+AGG - chr7_1:62070029-62070048 None:intergenic 50.0%
AATGAAGCTGACCTGAGCGA+AGG - chr7_1:62070049-62070068 None:intergenic 50.0%
TCGGCGATACTTGTGCATTC+TGG + chr7_1:62071574-62071593 Msa1028870:intron 50.0%
AGTGACCAGGTGGAGTAACA+AGG - chr7_1:62072249-62072268 None:intergenic 50.0%
TATGTGTTGCCAGCTGCACA+AGG - chr7_1:62072803-62072822 None:intergenic 50.0%
AATGCAATCGGAGTAGCAGC+TGG + chr7_1:62072825-62072844 Msa1028870:CDS 50.0%
ATGCAATCGGAGTAGCAGCT+GGG + chr7_1:62072826-62072845 Msa1028870:CDS 50.0%
! AGCAGCTTCAGCCCAGATTT+TGG + chr7_1:62069430-62069449 Msa1028870:five_prime_UTR 50.0%
!! AACTTGGTTTGTGCGGGTCT+CGG - chr7_1:62069537-62069556 None:intergenic 50.0%
CTTCCGCCCACAACTTAACT+TGG - chr7_1:62069553-62069572 None:intergenic 50.0%
! AGTTAAGTTGTGGGCGGAAG+TGG + chr7_1:62069553-62069572 Msa1028870:five_prime_UTR 50.0%
GGCGGAAGTGGTTCTTGAAA+TGG + chr7_1:62069565-62069584 Msa1028870:five_prime_UTR 50.0%
GGTTCTTGAAATGGGGGCTT+CGG + chr7_1:62069574-62069593 Msa1028870:five_prime_UTR 50.0%
!! TTCTAGGACTGAGCAACGGT+CGG - chr7_1:62069642-62069661 None:intergenic 50.0%
CGATGCAAGATCCCCAAACA+CGG - chr7_1:62069704-62069723 None:intergenic 50.0%
GTTTGGGGATCTTGCATCGA+AGG + chr7_1:62069705-62069724 Msa1028870:five_prime_UTR 50.0%
CCATAACCAGATCCCACTAC+CGG + chr7_1:62069792-62069811 Msa1028870:five_prime_UTR 50.0%
TGTGGCGGTTGAATTTGCGA+GGG - chr7_1:62069948-62069967 None:intergenic 50.0%
GTAGTGCCATGGTGAATCTG+TGG - chr7_1:62069966-62069985 None:intergenic 50.0%
AGGTTTGAACGACGAAGCAG+AGG - chr7_1:62070029-62070048 None:intergenic 50.0%
AATGAAGCTGACCTGAGCGA+AGG - chr7_1:62070049-62070068 None:intergenic 50.0%
TCGGCGATACTTGTGCATTC+TGG + chr7_1:62071574-62071593 Msa1028870:intron 50.0%
AGTGACCAGGTGGAGTAACA+AGG - chr7_1:62072249-62072268 None:intergenic 50.0%
TATGTGTTGCCAGCTGCACA+AGG - chr7_1:62072803-62072822 None:intergenic 50.0%
AATGCAATCGGAGTAGCAGC+TGG + chr7_1:62072825-62072844 Msa1028870:CDS 50.0%
ATGCAATCGGAGTAGCAGCT+GGG + chr7_1:62072826-62072845 Msa1028870:CDS 50.0%
!! TCTGATCGGGTGGGTTGTTC+GGG - chr7_1:62069498-62069517 None:intergenic 55.0%
!! GTCTGATCGGGTGGGTTGTT+CGG - chr7_1:62069499-62069518 None:intergenic 55.0%
GTTTGTGCGGGTCTCGGTTT+GGG - chr7_1:62069531-62069550 None:intergenic 55.0%
! TCTAGGACTGAGCAACGGTC+GGG - chr7_1:62069641-62069660 None:intergenic 55.0%
!! CCGGTAGTGGGATCTGGTTA+TGG - chr7_1:62069795-62069814 None:intergenic 55.0%
!! GTAGATCCGGTAGTGGGATC+TGG - chr7_1:62069801-62069820 None:intergenic 55.0%
CTGTGGCGGTTGAATTTGCG+AGG - chr7_1:62069949-62069968 None:intergenic 55.0%
CAACCGCCACAGATTCACCA+TGG + chr7_1:62069957-62069976 Msa1028870:exon 55.0%
GTGCCATGGTGAATCTGTGG+CGG - chr7_1:62069963-62069982 None:intergenic 55.0%
CGTCGTTCAAACCTTCGCTC+AGG + chr7_1:62070035-62070054 Msa1028870:CDS 55.0%
! ATTCTCTGGCTCACGACGAC+AGG + chr7_1:62070135-62070154 Msa1028870:CDS 55.0%
CACGACGACAGGCAAGAATC+CGG + chr7_1:62070146-62070165 Msa1028870:CDS 55.0%
GCAAGAATCCGGTGGATCTG+TGG + chr7_1:62070157-62070176 Msa1028870:CDS 55.0%
TCCGGTGGATCTGTGGATCT+CGG + chr7_1:62070164-62070183 Msa1028870:CDS 55.0%
ACCGAGATCCACAGATCCAC+CGG - chr7_1:62070168-62070187 None:intergenic 55.0%
TCTCATGGCAAGTGACCAGG+TGG - chr7_1:62072259-62072278 None:intergenic 55.0%
TGCTCTCATGGCAAGTGACC+AGG - chr7_1:62072262-62072281 None:intergenic 55.0%
TGCAATCGGAGTAGCAGCTG+GGG + chr7_1:62072827-62072846 Msa1028870:CDS 55.0%
ATGTACCTCAGTGGCAGTGG+TGG + chr7_1:62072869-62072888 Msa1028870:CDS 55.0%
TGTACCTCAGTGGCAGTGGT+GGG + chr7_1:62072870-62072889 Msa1028870:CDS 55.0%
! GAGGAAGCATGCTGGCATCT+AGG + chr7_1:62072892-62072911 Msa1028870:CDS 55.0%
! GACAGTGGCTACAGAGCGTT+GGG - chr7_1:62072922-62072941 None:intergenic 55.0%
CAACGCTCTGTAGCCACTGT+CGG + chr7_1:62072921-62072940 Msa1028870:CDS 55.0%
GAAGAGAAGACCACCGACAG+TGG - chr7_1:62072937-62072956 None:intergenic 55.0%
GTCGGTGGTCTTCTCTTCCT+AGG + chr7_1:62072939-62072958 Msa1028870:CDS 55.0%
!! TCTGATCGGGTGGGTTGTTC+GGG - chr7_1:62069498-62069517 None:intergenic 55.0%
!! GTCTGATCGGGTGGGTTGTT+CGG - chr7_1:62069499-62069518 None:intergenic 55.0%
GTTTGTGCGGGTCTCGGTTT+GGG - chr7_1:62069531-62069550 None:intergenic 55.0%
! TCTAGGACTGAGCAACGGTC+GGG - chr7_1:62069641-62069660 None:intergenic 55.0%
!! CCGGTAGTGGGATCTGGTTA+TGG - chr7_1:62069795-62069814 None:intergenic 55.0%
!! GTAGATCCGGTAGTGGGATC+TGG - chr7_1:62069801-62069820 None:intergenic 55.0%
CTGTGGCGGTTGAATTTGCG+AGG - chr7_1:62069949-62069968 None:intergenic 55.0%
CAACCGCCACAGATTCACCA+TGG + chr7_1:62069957-62069976 Msa1028870:exon 55.0%
GTGCCATGGTGAATCTGTGG+CGG - chr7_1:62069963-62069982 None:intergenic 55.0%
CGTCGTTCAAACCTTCGCTC+AGG + chr7_1:62070035-62070054 Msa1028870:CDS 55.0%
! ATTCTCTGGCTCACGACGAC+AGG + chr7_1:62070135-62070154 Msa1028870:CDS 55.0%
CACGACGACAGGCAAGAATC+CGG + chr7_1:62070146-62070165 Msa1028870:CDS 55.0%
GCAAGAATCCGGTGGATCTG+TGG + chr7_1:62070157-62070176 Msa1028870:CDS 55.0%
TCCGGTGGATCTGTGGATCT+CGG + chr7_1:62070164-62070183 Msa1028870:CDS 55.0%
ACCGAGATCCACAGATCCAC+CGG - chr7_1:62070168-62070187 None:intergenic 55.0%
TCTCATGGCAAGTGACCAGG+TGG - chr7_1:62072259-62072278 None:intergenic 55.0%
TGCTCTCATGGCAAGTGACC+AGG - chr7_1:62072262-62072281 None:intergenic 55.0%
TGCAATCGGAGTAGCAGCTG+GGG + chr7_1:62072827-62072846 Msa1028870:CDS 55.0%
ATGTACCTCAGTGGCAGTGG+TGG + chr7_1:62072869-62072888 Msa1028870:CDS 55.0%
TGTACCTCAGTGGCAGTGGT+GGG + chr7_1:62072870-62072889 Msa1028870:CDS 55.0%
! GAGGAAGCATGCTGGCATCT+AGG + chr7_1:62072892-62072911 Msa1028870:CDS 55.0%
! GACAGTGGCTACAGAGCGTT+GGG - chr7_1:62072922-62072941 None:intergenic 55.0%
CAACGCTCTGTAGCCACTGT+CGG + chr7_1:62072921-62072940 Msa1028870:CDS 55.0%
GAAGAGAAGACCACCGACAG+TGG - chr7_1:62072937-62072956 None:intergenic 55.0%
GTCGGTGGTCTTCTCTTCCT+AGG + chr7_1:62072939-62072958 Msa1028870:CDS 55.0%
!! GGGTATCGGTCTGATCGGGT+GGG - chr7_1:62069507-62069526 None:intergenic 60.0%
!! TGGGCGGGTATCGGTCTGAT+CGG - chr7_1:62069512-62069531 None:intergenic 60.0%
!! GTCTCGGTTTGGGCGGGTAT+CGG - chr7_1:62069521-62069540 None:intergenic 60.0%
GGTTTGTGCGGGTCTCGGTT+TGG - chr7_1:62069532-62069551 None:intergenic 60.0%
CGGGCCCGAACTTGGCAATA+TGG - chr7_1:62069606-62069625 None:intergenic 60.0%
ACTGAGCAACGGTCGGGTTC+GGG - chr7_1:62069635-62069654 None:intergenic 60.0%
GACTGAGCAACGGTCGGGTT+CGG - chr7_1:62069636-62069655 None:intergenic 60.0%
GACGACAGGCAAGAATCCGG+TGG + chr7_1:62070149-62070168 Msa1028870:CDS 60.0%
TACGGTCACCCCACTCAGCA+AGG - chr7_1:62072602-62072621 None:intergenic 60.0%
TAGCAGCTGGGGCCACCATA+GGG + chr7_1:62072838-62072857 Msa1028870:CDS 60.0%
! AGTGGTGGGAGGAAGCATGC+TGG + chr7_1:62072884-62072903 Msa1028870:CDS 60.0%
CGACAGTGGCTACAGAGCGT+TGG - chr7_1:62072923-62072942 None:intergenic 60.0%
!! GGGTATCGGTCTGATCGGGT+GGG - chr7_1:62069507-62069526 None:intergenic 60.0%
!! TGGGCGGGTATCGGTCTGAT+CGG - chr7_1:62069512-62069531 None:intergenic 60.0%
!! GTCTCGGTTTGGGCGGGTAT+CGG - chr7_1:62069521-62069540 None:intergenic 60.0%
GGTTTGTGCGGGTCTCGGTT+TGG - chr7_1:62069532-62069551 None:intergenic 60.0%
CGGGCCCGAACTTGGCAATA+TGG - chr7_1:62069606-62069625 None:intergenic 60.0%
ACTGAGCAACGGTCGGGTTC+GGG - chr7_1:62069635-62069654 None:intergenic 60.0%
GACTGAGCAACGGTCGGGTT+CGG - chr7_1:62069636-62069655 None:intergenic 60.0%
GACGACAGGCAAGAATCCGG+TGG + chr7_1:62070149-62070168 Msa1028870:CDS 60.0%
TACGGTCACCCCACTCAGCA+AGG - chr7_1:62072602-62072621 None:intergenic 60.0%
TAGCAGCTGGGGCCACCATA+GGG + chr7_1:62072838-62072857 Msa1028870:CDS 60.0%
! AGTGGTGGGAGGAAGCATGC+TGG + chr7_1:62072884-62072903 Msa1028870:CDS 60.0%
CGACAGTGGCTACAGAGCGT+TGG - chr7_1:62072923-62072942 None:intergenic 60.0%
!! CGGGTATCGGTCTGATCGGG+TGG - chr7_1:62069508-62069527 None:intergenic 65.0%
!! GGGCGGGTATCGGTCTGATC+GGG - chr7_1:62069511-62069530 None:intergenic 65.0%
!! TGTGCGGGTCTCGGTTTGGG+CGG - chr7_1:62069528-62069547 None:intergenic 65.0%
GTAGCAGCTGGGGCCACCAT+AGG + chr7_1:62072837-62072856 Msa1028870:CDS 65.0%
! ACCTCAGTGGCAGTGGTGGG+AGG + chr7_1:62072873-62072892 Msa1028870:CDS 65.0%
TCCTCCCACCACTGCCACTG+AGG - chr7_1:62072877-62072896 None:intergenic 65.0%
CGCTCTGTAGCCACTGTCGG+TGG + chr7_1:62072924-62072943 Msa1028870:CDS 65.0%
!! CGGGTATCGGTCTGATCGGG+TGG - chr7_1:62069508-62069527 None:intergenic 65.0%
!! GGGCGGGTATCGGTCTGATC+GGG - chr7_1:62069511-62069530 None:intergenic 65.0%
!! TGTGCGGGTCTCGGTTTGGG+CGG - chr7_1:62069528-62069547 None:intergenic 65.0%
GTAGCAGCTGGGGCCACCAT+AGG + chr7_1:62072837-62072856 Msa1028870:CDS 65.0%
! ACCTCAGTGGCAGTGGTGGG+AGG + chr7_1:62072873-62072892 Msa1028870:CDS 65.0%
TCCTCCCACCACTGCCACTG+AGG - chr7_1:62072877-62072896 None:intergenic 65.0%
CGCTCTGTAGCCACTGTCGG+TGG + chr7_1:62072924-62072943 Msa1028870:CDS 65.0%
!! GTGCGGGTCTCGGTTTGGGC+GGG - chr7_1:62069527-62069546 None:intergenic 70.0%
AGCAACGGTCGGGTTCGGGC+GGG - chr7_1:62069631-62069650 None:intergenic 70.0%
GAGCAACGGTCGGGTTCGGG+CGG - chr7_1:62069632-62069651 None:intergenic 70.0%
!! GTGCGGGTCTCGGTTTGGGC+GGG - chr7_1:62069527-62069546 None:intergenic 70.0%
AGCAACGGTCGGGTTCGGGC+GGG - chr7_1:62069631-62069650 None:intergenic 70.0%
GAGCAACGGTCGGGTTCGGG+CGG - chr7_1:62069632-62069651 None:intergenic 70.0%
! GGCGGGTTCGGGCCCGAACT+TGG - chr7_1:62069614-62069633 None:intergenic 75.0%
! GGTCGGGTTCGGGCGGGTTC+GGG - chr7_1:62069625-62069644 None:intergenic 75.0%
! CGGTCGGGTTCGGGCGGGTT+CGG - chr7_1:62069626-62069645 None:intergenic 75.0%
! GGCGGGTTCGGGCCCGAACT+TGG - chr7_1:62069614-62069633 None:intergenic 75.0%
! GGTCGGGTTCGGGCGGGTTC+GGG - chr7_1:62069625-62069644 None:intergenic 75.0%
! CGGTCGGGTTCGGGCGGGTT+CGG - chr7_1:62069626-62069645 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 62069351 62073432 62069351 ID=Msa1028870;Name=Msa1028870
chr7_1 mRNA 62069351 62073432 62069351 ID=Msa1028870-mRNA-1;Parent=Msa1028870;Name=Msa1028870-mRNA-1;_AED=0.06;_eAED=0.06;_QI=625|1|1|1|1|1|9|431|284
chr7_1 exon 62069351 62070056 62069351 ID=Msa1028870-mRNA-1:exon:13137;Parent=Msa1028870-mRNA-1
chr7_1 exon 62070134 62070199 62070134 ID=Msa1028870-mRNA-1:exon:13138;Parent=Msa1028870-mRNA-1
chr7_1 exon 62070283 62070396 62070283 ID=Msa1028870-mRNA-1:exon:13139;Parent=Msa1028870-mRNA-1
chr7_1 exon 62071212 62071310 62071212 ID=Msa1028870-mRNA-1:exon:13140;Parent=Msa1028870-mRNA-1
chr7_1 exon 62071492 62071564 62071492 ID=Msa1028870-mRNA-1:exon:13141;Parent=Msa1028870-mRNA-1
chr7_1 exon 62071883 62071968 62071883 ID=Msa1028870-mRNA-1:exon:13142;Parent=Msa1028870-mRNA-1
chr7_1 exon 62072418 62072501 62072418 ID=Msa1028870-mRNA-1:exon:13143;Parent=Msa1028870-mRNA-1
chr7_1 exon 62072582 62072641 62072582 ID=Msa1028870-mRNA-1:exon:13144;Parent=Msa1028870-mRNA-1
chr7_1 exon 62072810 62073432 62072810 ID=Msa1028870-mRNA-1:exon:13145;Parent=Msa1028870-mRNA-1
chr7_1 five_prime_UTR 62069351 62069975 62069351 ID=Msa1028870-mRNA-1:five_prime_utr;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62069976 62070056 62069976 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62070134 62070199 62070134 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62070283 62070396 62070283 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62071212 62071310 62071212 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62071492 62071564 62071492 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62071883 62071968 62071883 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62072418 62072501 62072418 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62072582 62072641 62072582 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 CDS 62072810 62073001 62072810 ID=Msa1028870-mRNA-1:cds;Parent=Msa1028870-mRNA-1
chr7_1 three_prime_UTR 62073002 62073432 62073002 ID=Msa1028870-mRNA-1:three_prime_utr;Parent=Msa1028870-mRNA-1
Gene Sequence

>Msa1028870

ATGGCACTACGATTCAACATCAATGGAAGAATCACCGTTTTCGTTCTTCTCCTCTGCTTCGTCGTTCAAACCTTCGCTCAGGATTCTCTGGCTCACGACGACAGGCAAGAATCCGGTGGATCTGTGGATCTCGGTCGCCGCGCCAAAGTTGCGTTGAATGATATAGAGAATGGTTCGGTCATTTCTCTTAGCTTGGATTCTTCTGGTGTTGGACTCTTTGATGCATTCTTTGCTAGTTTATCAATGATTCTCGTTAGTGAGATTGGGGATGAGACATTTATTATAGCAGCTCTTATGGCTATGCGTCATCCTAAGTCAATTGTCTTGTCTGGTGCACTAAGTGCCTTGATTATAATGACGGTACTTTCTACAGGACTAGGAAGGATTGTGCCAAATTTGATTTCAAAGAAGCATACAAATAGTGCTGCTACAGTTCTTTATCTTTTCTTCGGGTTACGACTGCTGTACATTGCTTGGAAATCAGATCCAAAATCTTCACAGAAGAAAGAAATGGAAGAAGTTGAAGAAAAACTTGAAGGTGGACAAGGGAAAACTTCATTTCGGCGGTTCTTCTCAAGATTTTGTACACCCATATTTTTAGAGTCTTTTGTTTTAACATTCCTTGCTGAGTGGGGTGACCGTAGCCAGATTGCGACAATTGCACTGGCAACACATAAAAATGCAATCGGAGTAGCAGCTGGGGCCACCATAGGGCACACAATATGTACCTCAGTGGCAGTGGTGGGAGGAAGCATGCTGGCATCTAGGATTTCCCAACGCTCTGTAGCCACTGTCGGTGGTCTTCTCTTCCTAGGCTTTTCTTTGTCTTCATACTTCTACCCCCCTCTAGATTAA
Protein sequence

>Msa1028870

MALRFNINGRITVFVLLLCFVVQTFAQDSLAHDDRQESGGSVDLGRRAKVALNDIENGSVISLSLDSSGVGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLISKKHTNSAATVLYLFFGLRLLYIAWKSDPKSSQKKEMEEVEEKLEGGQGKTSFRRFFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAIGVAAGATIGHTICTSVAVVGGSMLASRISQRSVATVGGLLFLGFSLSSYFYPPLD*