Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207840 | XP_003608760.1 | 98.475 | 590 | 9 | 0 | 1 | 590 | 1 | 590 | 0.0 | 1202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207840 | sp|Q9SU40|SKU5_ARATH | 79.359 | 562 | 115 | 1 | 6 | 566 | 3 | 564 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030130 | Msa1207840 | 0.822138 | 2.780931e-53 | -8.615850e-47 |
| Msa0109890 | Msa1207840 | 0.831401 | 1.704462e-55 | -8.615850e-47 |
| Msa0828840 | Msa1207840 | 0.808523 | 2.970188e-50 | -8.615850e-47 |
| Msa0156240 | Msa1207840 | 0.812307 | 4.527839e-51 | -8.615850e-47 |
| Msa0170130 | Msa1207840 | 0.821719 | 3.476695e-53 | -8.615850e-47 |
| Msa0400420 | Msa1207840 | 0.830077 | 3.598096e-55 | -8.615850e-47 |
| Msa1028870 | Msa1207840 | 0.817261 | 3.615141e-52 | -8.615850e-47 |
| Msa1031010 | Msa1207840 | 0.836432 | 9.388749e-57 | -8.615850e-47 |
| Msa1031020 | Msa1207840 | 0.825868 | 3.706660e-54 | -8.615850e-47 |
| Msa1070150 | Msa1207840 | 0.839677 | 1.373536e-57 | -8.615850e-47 |
| Msa1080760 | Msa1207840 | 0.821330 | 4.276232e-53 | -8.615850e-47 |
| Msa0287640 | Msa1207840 | 0.815295 | 9.948928e-52 | -8.615850e-47 |
| Msa0307500 | Msa1207840 | 0.801930 | 7.134937e-49 | -8.615850e-47 |
| Msa0317870 | Msa1207840 | 0.805521 | 1.282461e-49 | -8.615850e-47 |
| Msa0327670 | Msa1207840 | 0.806451 | 8.174486e-50 | -8.615850e-47 |
| Msa0333950 | Msa1207840 | 0.800456 | 1.429309e-48 | -8.615850e-47 |
| Msa0334060 | Msa1207840 | 0.802790 | 4.746250e-49 | -8.615850e-47 |
| Msa1157980 | Msa1207840 | 0.815630 | 8.379307e-52 | -8.615850e-47 |
| Msa1207840 | Msa1257720 | 0.997055 | 3.430435e-236 | -8.615850e-47 |
| Msa1207840 | Msa1257780 | 0.952749 | 1.237403e-110 | -8.615850e-47 |
| Msa1207840 | Msa1329160 | 0.958664 | 1.346199e-116 | -8.615850e-47 |
| Msa1207840 | Msa1366330 | 0.827307 | 1.681478e-54 | -8.615850e-47 |
| Msa1207840 | Msa1404680 | 0.845034 | 5.224348e-59 | -8.615850e-47 |
| Msa1207840 | Msa1450520 | 0.996053 | 7.470798e-223 | -8.615850e-47 |
| Msa1207840 | Msa1455400 | 0.837241 | 5.837052e-57 | -8.615850e-47 |
| Msa0519840 | Msa1207840 | 0.801090 | 1.060958e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207840 | MtrunA17_Chr4g0056511 | 98.475 | 590 | 9 | 0 | 1 | 590 | 1 | 590 | 0.0 | 1202 |
| Msa1207840 | MtrunA17_Chr3g0079321 | 66.954 | 581 | 192 | 0 | 6 | 586 | 8 | 588 | 0.0 | 815 |
| Msa1207840 | MtrunA17_Chr7g0234061 | 67.135 | 569 | 181 | 4 | 24 | 589 | 26 | 591 | 0.0 | 775 |
| Msa1207840 | MtrunA17_Chr3g0143671 | 52.514 | 537 | 234 | 7 | 16 | 551 | 19 | 535 | 0.0 | 552 |
| Msa1207840 | MtrunA17_Chr4g0024861 | 51.776 | 535 | 237 | 6 | 18 | 551 | 18 | 532 | 0.0 | 544 |
| Msa1207840 | MtrunA17_Chr1g0157341 | 51.273 | 550 | 244 | 7 | 6 | 551 | 5 | 534 | 0.0 | 535 |
| Msa1207840 | MtrunA17_Chr8g0374261 | 48.746 | 558 | 257 | 9 | 4 | 557 | 7 | 539 | 0.0 | 524 |
| Msa1207840 | MtrunA17_Chr2g0322441 | 51.963 | 535 | 236 | 6 | 18 | 551 | 21 | 535 | 0.0 | 523 |
| Msa1207840 | MtrunA17_Chr5g0402831 | 50.749 | 534 | 240 | 7 | 18 | 551 | 22 | 532 | 2.53e-179 | 517 |
| Msa1207840 | MtrunA17_Chr4g0038671 | 49.355 | 543 | 250 | 8 | 10 | 551 | 16 | 534 | 3.53e-179 | 517 |
| Msa1207840 | MtrunA17_Chr8g0374271 | 49.064 | 534 | 244 | 8 | 22 | 551 | 26 | 535 | 2.76e-177 | 512 |
| Msa1207840 | MtrunA17_Chr4g0075071 | 48.168 | 546 | 261 | 7 | 8 | 551 | 11 | 536 | 9.42e-172 | 498 |
| Msa1207840 | MtrunA17_Chr4g0043251 | 47.509 | 562 | 275 | 8 | 1 | 558 | 1 | 546 | 9.25e-171 | 496 |
| Msa1207840 | MtrunA17_Chr4g0043261 | 45.273 | 550 | 277 | 7 | 13 | 558 | 11 | 540 | 3.43e-161 | 471 |
| Msa1207840 | MtrunA17_Chr3g0121151 | 44.865 | 555 | 276 | 8 | 15 | 558 | 50 | 585 | 8.24e-157 | 462 |
| Msa1207840 | MtrunA17_Chr3g0121161 | 45.144 | 556 | 273 | 10 | 15 | 558 | 50 | 585 | 7.67e-156 | 459 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 52.155 | 464 | 200 | 7 | 89 | 551 | 13 | 455 | 7.26e-155 | 469 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 886 | 951 | 4.76e-14 | 75.5 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 514 | 579 | 6.61e-14 | 75.1 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 576 | 641 | 6.61e-14 | 75.1 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 638 | 703 | 6.61e-14 | 75.1 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 700 | 765 | 6.61e-14 | 75.1 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 824 | 889 | 6.61e-14 | 75.1 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 50.820 | 61 | 30 | 0 | 491 | 551 | 457 | 517 | 1.74e-13 | 73.9 |
| Msa1207840 | MtrunA17_Chr4g0024641 | 46.970 | 66 | 35 | 0 | 486 | 551 | 762 | 827 | 6.51e-13 | 72.0 |
| Msa1207840 | MtrunA17_Chr3g0121171 | 45.772 | 544 | 269 | 7 | 22 | 558 | 21 | 545 | 8.10e-146 | 465 |
| Msa1207840 | MtrunA17_Chr3g0121171 | 45.324 | 556 | 272 | 10 | 15 | 558 | 585 | 1120 | 2.06e-144 | 461 |
| Msa1207840 | MtrunA17_Chr3g0121171 | 44.685 | 555 | 277 | 8 | 15 | 558 | 1160 | 1695 | 6.74e-143 | 457 |
| Msa1207840 | MtrunA17_Chr3g0121171 | 43.705 | 556 | 272 | 11 | 15 | 558 | 1735 | 2261 | 7.30e-136 | 437 |
| Msa1207840 | MtrunA17_Chr1g0197301 | 48.348 | 333 | 164 | 6 | 220 | 550 | 4 | 330 | 8.62e-102 | 311 |
| Msa1207840 | MtrunA17_Chr5g0404341 | 29.474 | 570 | 356 | 18 | 9 | 549 | 14 | 566 | 3.85e-62 | 215 |
| Msa1207840 | MtrunA17_Chr5g0404361 | 29.534 | 579 | 360 | 19 | 1 | 549 | 51 | 611 | 7.10e-60 | 209 |
| Msa1207840 | MtrunA17_Chr7g0238941 | 29.101 | 567 | 332 | 19 | 29 | 549 | 36 | 578 | 1.82e-54 | 194 |
| Msa1207840 | MtrunA17_Chr7g0238351 | 28.670 | 579 | 367 | 18 | 6 | 549 | 14 | 581 | 2.95e-53 | 191 |
| Msa1207840 | MtrunA17_Chr3g0118321 | 27.367 | 581 | 362 | 21 | 6 | 550 | 7 | 563 | 7.29e-53 | 189 |
| Msa1207840 | MtrunA17_Chr8g0346581 | 28.599 | 521 | 335 | 14 | 29 | 522 | 36 | 546 | 2.03e-52 | 188 |
| Msa1207840 | MtrunA17_Chr7g0237491 | 27.931 | 580 | 369 | 20 | 6 | 549 | 14 | 580 | 2.71e-52 | 188 |
| Msa1207840 | MtrunA17_Chr5g0429511 | 28.371 | 571 | 361 | 19 | 7 | 549 | 8 | 558 | 1.24e-51 | 186 |
| Msa1207840 | MtrunA17_Chr4g0031901 | 27.788 | 547 | 334 | 13 | 8 | 514 | 25 | 550 | 1.64e-51 | 186 |
| Msa1207840 | MtrunA17_Chr1g0197311 | 41.152 | 243 | 105 | 4 | 10 | 221 | 8 | 243 | 8.07e-51 | 175 |
| Msa1207840 | MtrunA17_Chr7g0237441 | 27.336 | 578 | 375 | 18 | 6 | 549 | 14 | 580 | 5.55e-50 | 182 |
| Msa1207840 | MtrunA17_Chr4g0005921 | 26.703 | 543 | 365 | 15 | 29 | 549 | 26 | 557 | 6.83e-50 | 181 |
| Msa1207840 | MtrunA17_Chr3g0104061 | 28.159 | 554 | 351 | 20 | 24 | 549 | 22 | 556 | 5.90e-49 | 179 |
| Msa1207840 | MtrunA17_Chr8g0382691 | 29.371 | 572 | 341 | 19 | 17 | 551 | 24 | 569 | 1.22e-48 | 178 |
| Msa1207840 | MtrunA17_Chr3g0118331 | 28.086 | 559 | 342 | 20 | 29 | 550 | 27 | 562 | 1.38e-47 | 175 |
| Msa1207840 | MtrunA17_Chr5g0431581 | 27.417 | 569 | 371 | 17 | 10 | 549 | 5 | 560 | 1.94e-46 | 172 |
| Msa1207840 | MtrunA17_Chr5g0436461 | 26.970 | 571 | 368 | 20 | 6 | 549 | 6 | 554 | 1.58e-45 | 169 |
| Msa1207840 | MtrunA17_Chr7g0240971 | 28.223 | 574 | 340 | 19 | 6 | 531 | 3 | 552 | 9.36e-44 | 164 |
| Msa1207840 | MtrunA17_Chr3g0114211 | 28.358 | 536 | 341 | 17 | 9 | 514 | 13 | 535 | 1.61e-43 | 164 |
| Msa1207840 | MtrunA17_Chr5g0437681 | 28.166 | 529 | 335 | 16 | 14 | 509 | 11 | 527 | 3.21e-43 | 162 |
| Msa1207840 | MtrunA17_Chr7g0238981 | 26.763 | 553 | 365 | 17 | 29 | 549 | 49 | 593 | 9.69e-43 | 162 |
| Msa1207840 | MtrunA17_Chr4g0008521 | 26.476 | 559 | 363 | 12 | 27 | 549 | 26 | 572 | 3.23e-41 | 157 |
| Msa1207840 | MtrunA17_Chr7g0240991 | 28.796 | 573 | 358 | 20 | 15 | 549 | 11 | 571 | 3.80e-41 | 157 |
| Msa1207840 | MtrunA17_Chr2g0278811 | 25.376 | 599 | 384 | 19 | 6 | 549 | 17 | 607 | 1.78e-39 | 152 |
| Msa1207840 | MtrunA17_Chr4g0075781 | 37.778 | 225 | 78 | 5 | 133 | 355 | 3 | 167 | 1.35e-36 | 134 |
| Msa1207840 | MtrunA17_Chr3g0118341 | 35.714 | 168 | 102 | 6 | 8 | 172 | 8 | 172 | 3.51e-24 | 100 |
| Msa1207840 | MtrunA17_Chr3g0133871 | 31.980 | 197 | 125 | 5 | 6 | 196 | 9 | 202 | 6.25e-22 | 94.7 |
| Msa1207840 | MtrunA17_Chr3g0118351 | 26.087 | 345 | 204 | 11 | 242 | 550 | 5 | 334 | 4.23e-18 | 86.3 |
| Msa1207840 | MtrunA17_Chr4g0024651 | 46.970 | 66 | 35 | 0 | 18 | 83 | 18 | 83 | 3.56e-12 | 63.2 |
| Msa1207840 | MtrunA17_Chr5g0436431 | 31.944 | 144 | 82 | 5 | 380 | 507 | 85 | 228 | 4.13e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207840 | AT4G12420.1 | 79.359 | 562 | 115 | 1 | 6 | 566 | 3 | 564 | 0.0 | 946 |
| Msa1207840 | AT4G12420.2 | 79.359 | 562 | 115 | 1 | 6 | 566 | 3 | 564 | 0.0 | 946 |
| Msa1207840 | AT5G51480.1 | 65.165 | 577 | 198 | 3 | 15 | 589 | 16 | 591 | 0.0 | 794 |
| Msa1207840 | AT4G25240.2 | 66.018 | 565 | 191 | 1 | 3 | 567 | 5 | 568 | 0.0 | 777 |
| Msa1207840 | AT4G25240.1 | 66.018 | 565 | 191 | 1 | 3 | 567 | 5 | 568 | 0.0 | 777 |
| Msa1207840 | AT5G48450.2 | 62.410 | 556 | 198 | 4 | 5 | 559 | 7 | 552 | 0.0 | 720 |
| Msa1207840 | AT5G48450.1 | 62.410 | 556 | 198 | 4 | 5 | 559 | 7 | 552 | 0.0 | 720 |
| Msa1207840 | AT1G76160.1 | 49.281 | 556 | 253 | 8 | 1 | 551 | 1 | 532 | 0.0 | 530 |
| Msa1207840 | AT1G21850.1 | 49.081 | 544 | 254 | 6 | 9 | 551 | 11 | 532 | 0.0 | 525 |
| Msa1207840 | AT4G22010.1 | 50.000 | 548 | 249 | 8 | 11 | 553 | 7 | 534 | 3.10e-180 | 520 |
| Msa1207840 | AT1G41830.1 | 48.816 | 549 | 256 | 7 | 6 | 553 | 11 | 535 | 3.91e-180 | 520 |
| Msa1207840 | AT1G21860.1 | 48.346 | 544 | 258 | 6 | 9 | 551 | 11 | 532 | 6.69e-180 | 519 |
| Msa1207840 | AT4G38420.1 | 49.724 | 543 | 246 | 9 | 16 | 551 | 19 | 541 | 9.70e-175 | 506 |
| Msa1207840 | AT1G55570.1 | 47.417 | 542 | 264 | 7 | 17 | 553 | 19 | 544 | 3.12e-173 | 503 |
| Msa1207840 | AT3G13390.1 | 48.059 | 541 | 260 | 7 | 23 | 558 | 24 | 548 | 4.98e-171 | 497 |
| Msa1207840 | AT4G28090.1 | 49.074 | 540 | 250 | 10 | 16 | 551 | 18 | 536 | 1.78e-168 | 490 |
| Msa1207840 | AT5G66920.1 | 46.629 | 534 | 256 | 8 | 22 | 551 | 32 | 540 | 8.90e-168 | 489 |
| Msa1207840 | AT4G37160.1 | 48.820 | 551 | 254 | 10 | 8 | 553 | 11 | 538 | 7.06e-167 | 486 |
| Msa1207840 | AT1G55560.1 | 45.714 | 560 | 278 | 9 | 6 | 558 | 5 | 545 | 9.40e-167 | 486 |
| Msa1207840 | AT3G13400.2 | 45.648 | 563 | 284 | 9 | 1 | 558 | 1 | 546 | 7.82e-166 | 484 |
| Msa1207840 | AT3G13400.1 | 45.648 | 563 | 284 | 9 | 1 | 558 | 1 | 546 | 7.82e-166 | 484 |
| Msa1207840 | AT1G75790.1 | 45.073 | 548 | 273 | 10 | 16 | 553 | 16 | 545 | 3.09e-159 | 467 |
| Msa1207840 | AT2G23630.2 | 47.940 | 534 | 256 | 7 | 22 | 554 | 30 | 542 | 2.56e-158 | 464 |
| Msa1207840 | AT2G23630.1 | 47.940 | 534 | 256 | 7 | 22 | 554 | 25 | 537 | 3.43e-158 | 464 |
| Msa1207840 | AT4G38420.3 | 49.068 | 483 | 219 | 9 | 16 | 491 | 19 | 481 | 6.60e-149 | 439 |
| Msa1207840 | AT4G38420.2 | 49.123 | 456 | 205 | 9 | 16 | 464 | 19 | 454 | 1.12e-138 | 411 |
| Msa1207840 | AT4G37160.2 | 49.134 | 462 | 207 | 10 | 8 | 464 | 11 | 449 | 1.28e-137 | 408 |
| Msa1207840 | AT5G21105.1 | 28.916 | 581 | 351 | 19 | 8 | 550 | 20 | 576 | 5.20e-58 | 204 |
| Msa1207840 | AT5G21100.1 | 28.322 | 572 | 346 | 18 | 18 | 550 | 15 | 561 | 1.35e-55 | 197 |
| Msa1207840 | AT5G21105.3 | 28.810 | 538 | 326 | 17 | 8 | 507 | 20 | 538 | 4.56e-54 | 192 |
| Msa1207840 | AT4G39830.1 | 27.087 | 587 | 371 | 17 | 6 | 553 | 13 | 581 | 1.50e-53 | 192 |
| Msa1207840 | AT2G30210.1 | 28.229 | 542 | 348 | 16 | 6 | 518 | 9 | 538 | 1.75e-51 | 186 |
| Msa1207840 | AT1G18140.1 | 28.998 | 569 | 338 | 21 | 29 | 549 | 31 | 581 | 1.37e-50 | 184 |
| Msa1207840 | AT5G58910.2 | 27.257 | 576 | 367 | 19 | 6 | 549 | 12 | 567 | 7.60e-50 | 182 |
| Msa1207840 | AT2G46570.1 | 28.442 | 552 | 348 | 17 | 29 | 549 | 34 | 569 | 5.79e-49 | 179 |
| Msa1207840 | AT5G60020.1 | 27.857 | 560 | 356 | 16 | 29 | 549 | 27 | 577 | 1.47e-48 | 178 |
| Msa1207840 | AT5G58910.3 | 27.431 | 576 | 365 | 20 | 6 | 549 | 12 | 566 | 2.02e-48 | 177 |
| Msa1207840 | AT5G48100.1 | 26.394 | 538 | 362 | 10 | 1 | 514 | 1 | 528 | 2.20e-48 | 177 |
| Msa1207840 | AT5G09360.1 | 29.049 | 568 | 354 | 20 | 6 | 544 | 18 | 565 | 5.56e-48 | 176 |
| Msa1207840 | AT5G60020.3 | 28.125 | 544 | 343 | 16 | 45 | 549 | 11 | 545 | 1.21e-47 | 175 |
| Msa1207840 | AT2G29130.1 | 26.950 | 564 | 347 | 16 | 29 | 549 | 32 | 573 | 1.89e-47 | 175 |
| Msa1207840 | AT5G03260.1 | 26.795 | 571 | 373 | 16 | 6 | 549 | 5 | 557 | 7.39e-46 | 170 |
| Msa1207840 | AT5G60020.2 | 27.938 | 519 | 330 | 14 | 29 | 510 | 27 | 538 | 2.44e-45 | 169 |
| Msa1207840 | AT2G38080.1 | 25.342 | 584 | 375 | 18 | 1 | 549 | 1 | 558 | 3.84e-45 | 168 |
| Msa1207840 | AT5G01190.1 | 26.667 | 570 | 375 | 18 | 9 | 549 | 3 | 558 | 6.87e-45 | 167 |
| Msa1207840 | AT5G05390.1 | 26.945 | 527 | 344 | 15 | 13 | 509 | 10 | 525 | 8.82e-45 | 167 |
| Msa1207840 | AT3G09220.1 | 26.908 | 524 | 347 | 14 | 14 | 509 | 12 | 527 | 7.03e-43 | 162 |
| Msa1207840 | AT5G07130.1 | 27.133 | 586 | 362 | 19 | 8 | 558 | 7 | 562 | 1.18e-42 | 161 |
| Msa1207840 | AT5G01190.2 | 26.894 | 528 | 347 | 17 | 47 | 549 | 31 | 544 | 1.71e-42 | 160 |
| Msa1207840 | AT5G01040.1 | 28.157 | 586 | 360 | 20 | 6 | 551 | 4 | 568 | 1.93e-42 | 161 |
| Msa1207840 | AT5G58910.1 | 27.002 | 537 | 336 | 19 | 45 | 549 | 11 | 523 | 2.81e-42 | 160 |
| Msa1207840 | AT5G01050.1 | 27.598 | 587 | 347 | 19 | 13 | 551 | 14 | 570 | 3.80e-42 | 160 |
| Msa1207840 | AT4G39830.3 | 26.358 | 497 | 312 | 15 | 93 | 553 | 6 | 484 | 4.47e-38 | 147 |
| Msa1207840 | AT2G40370.1 | 25.801 | 562 | 359 | 17 | 6 | 522 | 7 | 555 | 4.96e-38 | 148 |
| Msa1207840 | AT4G39830.2 | 26.358 | 497 | 312 | 15 | 93 | 553 | 8 | 486 | 5.12e-38 | 147 |
| Msa1207840 | AT2G46570.2 | 28.024 | 496 | 310 | 17 | 85 | 549 | 5 | 484 | 4.05e-36 | 141 |
| Msa1207840 | AT4G39830.4 | 25.553 | 497 | 303 | 14 | 93 | 553 | 8 | 473 | 1.16e-33 | 134 |
| Msa1207840 | AT5G21105.2 | 27.919 | 394 | 229 | 13 | 191 | 550 | 13 | 385 | 4.37e-32 | 128 |
| Msa1207840 | AT3G09220.2 | 25.688 | 436 | 290 | 12 | 100 | 509 | 3 | 430 | 9.79e-28 | 117 |
| Msa1207840 | AT5G07130.2 | 26.389 | 504 | 308 | 18 | 90 | 558 | 2 | 477 | 3.72e-27 | 115 |
| Msa1207840 | AT5G07130.3 | 26.389 | 504 | 308 | 18 | 90 | 558 | 2 | 477 | 3.72e-27 | 115 |
Find 165 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGAAGTCTGCCACATTTA+AGG | 0.121560 | 8_1:+65655240 | None:intergenic |
| TGGCTCCCAGTTTAATTATT+TGG | 0.135294 | 8_1:-65654849 | Msa1207840:three_prime_UTR |
| TGGAAGCTTTAGAGGATTTA+TGG | 0.153986 | 8_1:-65656072 | Msa1207840:CDS |
| TATCAACAAGTCTGAATTTC+AGG | 0.211179 | 8_1:-65656918 | Msa1207840:CDS |
| CTGAAAGATCCTTGTGGATT+TGG | 0.240958 | 8_1:+65656314 | None:intergenic |
| CAAAGAGCAGCTGGTGGATT+TGG | 0.248226 | 8_1:-65657877 | Msa1207840:CDS |
| TGTTCAAAATCGATGTTATC+AGG | 0.265298 | 8_1:+65657546 | None:intergenic |
| TGCTGACCATTACAAATTAA+AGG | 0.265825 | 8_1:-65656165 | Msa1207840:CDS |
| TGTAAATCAAATCACATAAA+AGG | 0.271262 | 8_1:-65658816 | Msa1207840:five_prime_UTR |
| GTAATTACTACAACAATTAT+AGG | 0.281133 | 8_1:+65654804 | None:intergenic |
| GGCTCCCAGTTTAATTATTT+GGG | 0.283123 | 8_1:-65654848 | Msa1207840:three_prime_UTR |
| GGTGAAGAAGCCATTGAATA+TGG | 0.286975 | 8_1:+65658736 | None:intergenic |
| AGTGTCCCAAATAATTAAAC+TGG | 0.299901 | 8_1:+65654843 | None:intergenic |
| TGGTAAGTCCAGTTCCATTT+TGG | 0.301426 | 8_1:+65657955 | None:intergenic |
| TGGAGCATGGACAGCAGTTT+TGG | 0.302215 | 8_1:-65655399 | Msa1207840:CDS |
| CCACAAGGATCTTTCAGATA+TGG | 0.317042 | 8_1:-65656308 | Msa1207840:CDS |
| GTAATCAATGGAAGCTTTAG+AGG | 0.317693 | 8_1:-65656080 | Msa1207840:CDS |
| TACATCACTGCTTCTCCTCT+TGG | 0.321669 | 8_1:-65658625 | Msa1207840:CDS |
| GTATGAAACCTCAAAATCAT+AGG | 0.321799 | 8_1:+65658645 | None:intergenic |
| TCATGGCAAGATGGTGTTCT+TGG | 0.331310 | 8_1:-65657997 | Msa1207840:CDS |
| TCACGTTGGCAACGAGTTAC+TGG | 0.341690 | 8_1:-65656724 | Msa1207840:CDS |
| CCCTCGACAATGTTGGAGTT+TGG | 0.344346 | 8_1:-65655373 | Msa1207840:CDS |
| ACCCGAGGAGGTCCGGTTAG+AGG | 0.356788 | 8_1:+65656113 | None:intergenic |
| CACAGCAACATTGTTGTTTG+TGG | 0.367710 | 8_1:+65658328 | None:intergenic |
| CTGAAGTCTGCCACATTTAA+GGG | 0.371433 | 8_1:+65655241 | None:intergenic |
| AGTGTGTCATTATATCTATA+AGG | 0.373217 | 8_1:+65657573 | None:intergenic |
| TTAGTTGATTGCGAAGAGTT+TGG | 0.378240 | 8_1:-65654984 | Msa1207840:three_prime_UTR |
| CCGTCTGTTTAGGTTTATCC+TGG | 0.379057 | 8_1:-65655419 | Msa1207840:intron |
| AACCTTGATTCATGGTATCT+TGG | 0.379868 | 8_1:-65655335 | Msa1207840:CDS |
| GAACAGAAAACCTTGATTCA+TGG | 0.383673 | 8_1:-65655343 | Msa1207840:CDS |
| CTAGATGATGGAAAAGATCT+TGG | 0.385324 | 8_1:-65657630 | Msa1207840:CDS |
| ATTGTCCTATTCCACCAAAA+TGG | 0.389757 | 8_1:-65657969 | Msa1207840:CDS |
| CCAATCCTGCCACTCCAATC+AGG | 0.392379 | 8_1:-65656190 | Msa1207840:CDS |
| GCTGACCATTACAAATTAAA+GGG | 0.394425 | 8_1:-65656164 | Msa1207840:CDS |
| TCCTCTTGGAGTACCCCAAC+AGG | 0.398295 | 8_1:-65658611 | Msa1207840:intron |
| GGACTATGAAAGAAAGAAAC+TGG | 0.404207 | 8_1:+65658872 | None:intergenic |
| GTAAATCTCTGTCACGTTGA+TGG | 0.410681 | 8_1:+65656283 | None:intergenic |
| GCCTCTAACCGGACCTCCTC+GGG | 0.410839 | 8_1:-65656114 | Msa1207840:CDS |
| TCTGATCCTTCACTTGAAAC+TGG | 0.411595 | 8_1:+65657935 | None:intergenic |
| CTGCTTCAATCAACGGGAAT+GGG | 0.420025 | 8_1:-65655095 | Msa1207840:CDS |
| CCAGATGGTGTTCTCATCAA+TGG | 0.420137 | 8_1:-65657603 | Msa1207840:CDS |
| TAATGGTCAGCAAGCCTGAT+TGG | 0.424218 | 8_1:+65656176 | None:intergenic |
| GCTATCAACAAACAGTTTCC+AGG | 0.425051 | 8_1:-65658368 | Msa1207840:CDS |
| TGTGAATGTCCACAACAAAT+TGG | 0.425756 | 8_1:-65658309 | Msa1207840:CDS |
| ATGAAAACCTCCTCATTCAT+TGG | 0.431957 | 8_1:-65658286 | Msa1207840:intron |
| CTATTCCACCAAAATGGAAC+TGG | 0.434841 | 8_1:-65657963 | Msa1207840:CDS |
| ATACTCCCTTTAATTTGTAA+TGG | 0.435490 | 8_1:+65656159 | None:intergenic |
| TTCAGCAAAGGAGGAGTTCA+TGG | 0.435896 | 8_1:-65658014 | Msa1207840:CDS |
| TTTCATCTGCTTCAATCAAC+GGG | 0.436558 | 8_1:-65655101 | Msa1207840:CDS |
| GATTGGAGAAGTGGTGTGGA+AGG | 0.436667 | 8_1:+65658942 | None:intergenic |
| TTGCGAAGAGTTTGGCTTGT+TGG | 0.437484 | 8_1:-65654976 | Msa1207840:three_prime_UTR |
| TGGCTTGTTGGTGAGATTTG+TGG | 0.442184 | 8_1:-65654964 | Msa1207840:three_prime_UTR |
| TCATGTATCAAGAATGTGAT+TGG | 0.443040 | 8_1:+65654782 | None:intergenic |
| TTGTGTCTATAAGGAAAGAA+AGG | 0.444984 | 8_1:+65658851 | None:intergenic |
| CCACATTTAAGGGCATTGTC+TGG | 0.445078 | 8_1:+65655251 | None:intergenic |
| TGAACCAAGCAAGATCTATC+AGG | 0.449999 | 8_1:-65656609 | Msa1207840:intron |
| CCTGATTGGAGTGGCAGGAT+TGG | 0.450544 | 8_1:+65656190 | None:intergenic |
| AGAGAGAGAGATTGGAGAAG+TGG | 0.454756 | 8_1:+65658933 | None:intergenic |
| GCAGGATGGACTTCGGAGAT+TGG | 0.461973 | 8_1:-65655892 | Msa1207840:intron |
| GTGTGTCATTATATCTATAA+GGG | 0.466183 | 8_1:+65657574 | None:intergenic |
| AAAACAACAATGTCCCCTTC+CGG | 0.467709 | 8_1:+65657805 | None:intergenic |
| TTGGTCAAGAAACATACATC+AGG | 0.467887 | 8_1:-65655316 | Msa1207840:CDS |
| ATGCATACTTATCACTTGAA+TGG | 0.471335 | 8_1:-65656020 | Msa1207840:CDS |
| TTTCCCACGAAGCCTCTAAC+CGG | 0.473650 | 8_1:-65656125 | Msa1207840:CDS |
| ACTACATTGTCGCAAGTGCC+AGG | 0.473662 | 8_1:-65656759 | Msa1207840:CDS |
| ATTTCATCTGCTTCAATCAA+CGG | 0.473734 | 8_1:-65655102 | Msa1207840:CDS |
| AGACAATAGTCAAATACAAT+TGG | 0.474655 | 8_1:-65659089 | Msa1207840:five_prime_UTR |
| ATGACCTCTTGCTTTCCCCT+TGG | 0.475068 | 8_1:+65656675 | None:intergenic |
| GAGATTGGTCTGAGAATAGC+AGG | 0.476348 | 8_1:-65655877 | Msa1207840:CDS |
| AGAGCAGCTGGTGGATTTGG+TGG | 0.476861 | 8_1:-65657874 | Msa1207840:CDS |
| AAGCGGAGAGCAACACTTAG+TGG | 0.478625 | 8_1:-65656224 | Msa1207840:CDS |
| CTTCAAATGGTGACAGCCTA+AGG | 0.485649 | 8_1:+65659051 | None:intergenic |
| TGTTTCTACCCGAGGAGGTC+CGG | 0.488278 | 8_1:+65656106 | None:intergenic |
| GAGACCTGATAGATCTTGCT+TGG | 0.490869 | 8_1:+65656605 | None:intergenic |
| CGACTTCGTGTACATAATGT+TGG | 0.490869 | 8_1:-65656943 | Msa1207840:CDS |
| GACCAAGATACCATGAATCA+AGG | 0.492744 | 8_1:+65655333 | None:intergenic |
| ATTAATGTAGGCTTTGAGAA+AGG | 0.494130 | 8_1:-65657655 | Msa1207840:intron |
| TTGAGAAAGGCTCTAGATGA+TGG | 0.494379 | 8_1:-65657642 | Msa1207840:CDS |
| TCTGCTTCAATCAACGGGAA+TGG | 0.495180 | 8_1:-65655096 | Msa1207840:CDS |
| CAGATGGTGTTCTCATCAAT+GGG | 0.495277 | 8_1:-65657602 | Msa1207840:CDS |
| GTATAGTATGAACTGTCCTT+AGG | 0.496777 | 8_1:-65659067 | Msa1207840:five_prime_UTR |
| AAAACTGCTGTCCATGCTCC+AGG | 0.500206 | 8_1:+65655401 | None:intergenic |
| GCAAGCCTGATTGGAGTGGC+AGG | 0.508141 | 8_1:+65656185 | None:intergenic |
| CTTGCACTATTCAAATTCCA+AGG | 0.508314 | 8_1:-65656692 | Msa1207840:CDS |
| GTAGAAACATCAGTAATCAA+TGG | 0.512552 | 8_1:-65656092 | Msa1207840:CDS |
| TCCCCTTCCGGAGTATCAAA+AGG | 0.513829 | 8_1:+65657817 | None:intergenic |
| CCATTGATGAGAACACCATC+TGG | 0.514712 | 8_1:+65657603 | None:intergenic |
| TTTCAAGTGAAGGATCAGAT+TGG | 0.514777 | 8_1:-65657931 | Msa1207840:CDS |
| TTGTTTAGCTTAATGTTCTG+TGG | 0.516495 | 8_1:-65654869 | Msa1207840:three_prime_UTR |
| TATCAAGAATTTAAGATGAA+AGG | 0.520588 | 8_1:+65654727 | None:intergenic |
| TTTAGGTTTATCCTGGAGCA+TGG | 0.523365 | 8_1:-65655412 | Msa1207840:intron |
| TTTGTGGTTACATTAATAGT+AGG | 0.524783 | 8_1:+65658344 | None:intergenic |
| GCTGAAGTTGTTATTCACTT+TGG | 0.525996 | 8_1:-65655073 | Msa1207840:CDS |
| TGAACTTGCATTCTGATCCA+TGG | 0.528156 | 8_1:+65656786 | None:intergenic |
| TAGAGTGGACACTGGATGGA+TGG | 0.533731 | 8_1:+65659004 | None:intergenic |
| GAGAGATTGGAGAAGTGGTG+TGG | 0.540422 | 8_1:+65658938 | None:intergenic |
| TTGCACTATTCAAATTCCAA+GGG | 0.541633 | 8_1:-65656691 | Msa1207840:CDS |
| TCTCTGCTAGAAGTAAGTTA+TGG | 0.541722 | 8_1:+65656887 | None:intergenic |
| GAACAAATTGATGTCAAACC+AGG | 0.544999 | 8_1:-65657528 | Msa1207840:intron |
| AATGAGTGAATGTCTTCAAA+TGG | 0.545566 | 8_1:+65659038 | None:intergenic |
| TTGGTCTCCCTCGACAATGT+TGG | 0.545883 | 8_1:-65655380 | Msa1207840:CDS |
| AAACCACCAGTGAAAATCGA+TGG | 0.548420 | 8_1:-65656248 | Msa1207840:CDS |
| ATACATCAGGGTTGTCAACC+CGG | 0.551620 | 8_1:-65655303 | Msa1207840:CDS |
| TTGATGAGAAAGAAGAAGAG+AGG | 0.551843 | 8_1:+65658715 | None:intergenic |
| TGGCAACGAGTTACTGGAGT+TGG | 0.551919 | 8_1:-65656718 | Msa1207840:CDS |
| GCTCTTTGAAAATTAAGTGA+AGG | 0.552773 | 8_1:+65657892 | None:intergenic |
| CAGTGAAAATCGATGGGAAG+CGG | 0.553222 | 8_1:-65656241 | Msa1207840:CDS |
| ATCAAAAGGAACAGAAATGA+CGG | 0.554519 | 8_1:+65657831 | None:intergenic |
| TATGAAACCTCAAAATCATA+GGG | 0.554546 | 8_1:+65658646 | None:intergenic |
| AGCAAGAGGTCATTTACCAC+CGG | 0.555237 | 8_1:-65656665 | Msa1207840:CDS |
| ACTAGCTTAGATATTCATGT+TGG | 0.562613 | 8_1:-65656832 | Msa1207840:CDS |
| CAAGTGATAAGTATGCATCT+TGG | 0.565246 | 8_1:+65656025 | None:intergenic |
| TTAAGGGCATTGTCTGGCAT+CGG | 0.569023 | 8_1:+65655257 | None:intergenic |
| ATTGACTGCAGGATGGACTT+CGG | 0.572724 | 8_1:-65655899 | Msa1207840:intron |
| AGGAGGAGTTCATGGCAAGA+TGG | 0.573398 | 8_1:-65658006 | Msa1207840:CDS |
| GACTTACCAGTTTCAAGTGA+AGG | 0.574483 | 8_1:-65657941 | Msa1207840:CDS |
| CGCAATCAACTAATTAAGAG+AGG | 0.574815 | 8_1:+65654994 | None:intergenic |
| GATGAAAGGAAAGTATGAAG+TGG | 0.579445 | 8_1:+65654741 | None:intergenic |
| AACCACCAGTGAAAATCGAT+GGG | 0.582588 | 8_1:-65656247 | Msa1207840:CDS |
| CAGCTGAAGAGAGTGTAAGA+AGG | 0.584437 | 8_1:+65658683 | None:intergenic |
| AAACAACCTACCAATGAATG+AGG | 0.588957 | 8_1:+65658276 | None:intergenic |
| ACGTGATTCATTCACAAACC+TGG | 0.590454 | 8_1:+65656741 | None:intergenic |
| GGTGTTCTCATCAATGGGAA+AGG | 0.593689 | 8_1:-65657597 | Msa1207840:CDS |
| CCAGACAATGCCCTTAAATG+TGG | 0.594808 | 8_1:-65655251 | Msa1207840:CDS |
| ATTACTGATGTTTCTACCCG+AGG | 0.595120 | 8_1:+65656098 | None:intergenic |
| GCAGGGGTACATATAACAAG+TGG | 0.596349 | 8_1:-65655859 | Msa1207840:CDS |
| GGTACATATAACAAGTGGGA+TGG | 0.596737 | 8_1:-65655854 | Msa1207840:CDS |
| TCAAATTGATCATCTGGACC+CGG | 0.598046 | 8_1:+65656646 | None:intergenic |
| TGGTGGTTGAAATAGGTCTG+GGG | 0.600438 | 8_1:-65658037 | Msa1207840:intron |
| TCAAAAGGAACAGAAATGAC+GGG | 0.601945 | 8_1:+65657832 | None:intergenic |
| TTGGTACACACGCAATCACA+CGG | 0.603449 | 8_1:-65657773 | Msa1207840:intron |
| GTATGAAGTGGAAACCGTGT+TGG | 0.603967 | 8_1:+65654753 | None:intergenic |
| GGTAGGTTTGAAATTTAACA+TGG | 0.604278 | 8_1:+65659158 | None:intergenic |
| ATACATGAAACTTGCCAACA+CGG | 0.606070 | 8_1:-65654767 | Msa1207840:three_prime_UTR |
| GGTCCGGTTAGAGGCTTCGT+GGG | 0.612012 | 8_1:+65656122 | None:intergenic |
| ATTGGAGAAGTGGTGTGGAA+GGG | 0.612731 | 8_1:+65658943 | None:intergenic |
| ATAGGTCTGGGGTTCAGCAA+AGG | 0.613231 | 8_1:-65658026 | Msa1207840:intron |
| AATAGCTCGTACTACAGCGC+AGG | 0.617032 | 8_1:-65655831 | Msa1207840:intron |
| ACCTGTTGGGGTACTCCAAG+AGG | 0.618129 | 8_1:+65658610 | None:intergenic |
| TCCAAACTCCAACATTGTCG+AGG | 0.619426 | 8_1:+65655372 | None:intergenic |
| GGTCTGGGGTTCAGCAAAGG+AGG | 0.623918 | 8_1:-65658023 | Msa1207840:CDS |
| AATTCCAAGGGGAAAGCAAG+AGG | 0.626773 | 8_1:-65656679 | Msa1207840:CDS |
| GTCAGCAAGCCTGATTGGAG+TGG | 0.632584 | 8_1:+65656181 | None:intergenic |
| GCAAGAGGTCATTTACCACC+GGG | 0.637101 | 8_1:-65656664 | Msa1207840:CDS |
| CCAAACTCCAACATTGTCGA+GGG | 0.637486 | 8_1:+65655373 | None:intergenic |
| GTTCTAGAGTGGACACTGGA+TGG | 0.641656 | 8_1:+65659000 | None:intergenic |
| TTACTTCTAGCAGAGACTGA+AGG | 0.644138 | 8_1:-65656880 | Msa1207840:CDS |
| GTGTCCCAAATAATTAAACT+GGG | 0.646084 | 8_1:+65654844 | None:intergenic |
| AAGGAACAGAAATGACGGGT+CGG | 0.646239 | 8_1:+65657836 | None:intergenic |
| TGCACTATTCAAATTCCAAG+GGG | 0.648906 | 8_1:-65656690 | Msa1207840:CDS |
| CAGGGGTACATATAACAAGT+GGG | 0.653422 | 8_1:-65655858 | Msa1207840:CDS |
| TGGTCAAGAAACATACATCA+GGG | 0.655143 | 8_1:-65655315 | Msa1207840:CDS |
| CCATATCTGAAAGATCCTTG+TGG | 0.657664 | 8_1:+65656308 | None:intergenic |
| AAAGATCTTGGAATGCCAGA+TGG | 0.662306 | 8_1:-65657618 | Msa1207840:CDS |
| CAACCTACCAATGAATGAGG+AGG | 0.666485 | 8_1:+65658279 | None:intergenic |
| AGATGGAACGTATCAGCAAG+TGG | 0.669963 | 8_1:-65656344 | Msa1207840:CDS |
| GTTACATTAATAGTAGGACC+TGG | 0.670641 | 8_1:+65658350 | None:intergenic |
| CAACATTATGTACACGAAGT+CGG | 0.670671 | 8_1:+65656944 | None:intergenic |
| AGATTGGTCTGAGAATAGCA+GGG | 0.671526 | 8_1:-65655876 | Msa1207840:CDS |
| ACTGATGTTTCTACCCGAGG+AGG | 0.675653 | 8_1:+65656101 | None:intergenic |
| GTGTGTTCTAGAGTGGACAC+TGG | 0.679962 | 8_1:+65658996 | None:intergenic |
| GGTTTGTGAATGAATCACGT+TGG | 0.686085 | 8_1:-65656738 | Msa1207840:CDS |
| GATTGGTCTGAGAATAGCAG+GGG | 0.702170 | 8_1:-65655875 | Msa1207840:CDS |
| AATTGATCATCTGGACCCGG+TGG | 0.707631 | 8_1:+65656649 | None:intergenic |
| GGTGCTCGTCCAAATCCACA+AGG | 0.734148 | 8_1:-65656323 | Msa1207840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTTAAAAAATTGA+GGG | - | chr8_1:65658294-65658313 | Msa1207840:CDS | 10.0% |
| !!! | TTAGTATTTGTTTCTATTTT+TGG | + | chr8_1:65654729-65654748 | None:intergenic | 15.0% |
| !!! | AAGTTTATTTTTTTTATTGG+TGG | - | chr8_1:65655857-65655876 | Msa1207840:CDS | 15.0% |
| !!! | AAGTTTTTTGAAATTAATGT+AGG | - | chr8_1:65656244-65656263 | Msa1207840:CDS | 15.0% |
| !!! | TTTCTTTGTTAATTTTTAAC+AGG | - | chr8_1:65656935-65656954 | Msa1207840:CDS | 15.0% |
| !! | AATATATAATTCTATAGAAC+TGG | + | chr8_1:65657340-65657359 | None:intergenic | 15.0% |
| !!! | GTTTTGTTTTTAAAAAATTG+AGG | - | chr8_1:65658293-65658312 | Msa1207840:CDS | 15.0% |
| !!! | AAAATTACCCCTTTTTTTAA+TGG | + | chr8_1:65654781-65654800 | None:intergenic | 20.0% |
| !!! | TCAATTTTTTTGTGTCTATA+AGG | + | chr8_1:65655072-65655091 | None:intergenic | 20.0% |
| !! | TGTAAATCAAATCACATAAA+AGG | - | chr8_1:65655095-65655114 | Msa1207840:CDS | 20.0% |
| !! | TGTTATAGTTAAACTTGAAA+AGG | - | chr8_1:65655437-65655456 | Msa1207840:intron | 20.0% |
| !! | GTTATAGTTAAACTTGAAAA+GGG | - | chr8_1:65655438-65655457 | Msa1207840:intron | 20.0% |
| !! | GTTATATAGAAAAGATGTAA+AGG | - | chr8_1:65655480-65655499 | Msa1207840:intron | 20.0% |
| !!! | ATGTTTTTCATTGTTTATGT+AGG | - | chr8_1:65655515-65655534 | Msa1207840:intron | 20.0% |
| !! | GTTTAAAAAGTTGAAAACTT+TGG | - | chr8_1:65655816-65655835 | Msa1207840:intron | 20.0% |
| !!! | TTACTTTTCAAATACTGATA+TGG | - | chr8_1:65656458-65656477 | Msa1207840:intron | 20.0% |
| !!! | TTGTTTTTCAAATACTGATA+TGG | - | chr8_1:65656520-65656539 | Msa1207840:intron | 20.0% |
| !!! | GCTTTTAGTAAATTAAGATT+AGG | - | chr8_1:65656690-65656709 | Msa1207840:CDS | 20.0% |
| !!! | TATCAACTTTAGAATTCATT+AGG | - | chr8_1:65657420-65657439 | Msa1207840:intron | 20.0% |
| !! | ACATATTTAATATGTCAACA+CGG | + | chr8_1:65657452-65657471 | None:intergenic | 20.0% |
| !! | GGTTTATGAAAAAAAAAAGA+AGG | + | chr8_1:65658205-65658224 | None:intergenic | 20.0% |
| !! | TTACTGAAAAATGTTCATTA+TGG | + | chr8_1:65658879-65658898 | None:intergenic | 20.0% |
| !! | GTAATTACTACAACAATTAT+AGG | + | chr8_1:65659110-65659129 | None:intergenic | 20.0% |
| !!! | TATCAAGAATTTAAGATGAA+AGG | + | chr8_1:65659187-65659206 | None:intergenic | 20.0% |
| ! | AGACAATAGTCAAATACAAT+TGG | - | chr8_1:65654822-65654841 | Msa1207840:three_prime_UTR | 25.0% |
| !!! | CATTGAATATGGAACTTTTT+TGG | + | chr8_1:65655167-65655186 | None:intergenic | 25.0% |
| ! | CAAAAAAGTTCCATATTCAA+TGG | - | chr8_1:65655165-65655184 | Msa1207840:intron | 25.0% |
| ! | TATGAAACCTCAAAATCATA+GGG | + | chr8_1:65655268-65655287 | None:intergenic | 25.0% |
| !! | CTTCTTTCTCTTACTATTTT+TGG | - | chr8_1:65655328-65655347 | Msa1207840:CDS | 25.0% |
| !!! | TCTCTTACTATTTTTGGAAA+TGG | - | chr8_1:65655334-65655353 | Msa1207840:CDS | 25.0% |
| !!! | CTCTTACTATTTTTGGAAAT+GGG | - | chr8_1:65655335-65655354 | Msa1207840:CDS | 25.0% |
| ! | TTTGTGGTTACATTAATAGT+AGG | + | chr8_1:65655570-65655589 | None:intergenic | 25.0% |
| !!! | TTTTTATTGGTGGTTGAAAT+AGG | - | chr8_1:65655867-65655886 | Msa1207840:CDS | 25.0% |
| !! | GTGTGTCATTATATCTATAA+GGG | + | chr8_1:65656340-65656359 | None:intergenic | 25.0% |
| !! | AGTGTGTCATTATATCTATA+AGG | + | chr8_1:65656341-65656360 | None:intergenic | 25.0% |
| !!! | TGATATGGATGTTTTTTGTT+TGG | - | chr8_1:65656473-65656492 | Msa1207840:intron | 25.0% |
| ! | AAACATTAGAAACATTTGAC+AGG | + | chr8_1:65656918-65656937 | None:intergenic | 25.0% |
| ! | AATTATATAGTCTGCATTAG+TGG | + | chr8_1:65657502-65657521 | None:intergenic | 25.0% |
| !!! | ATACTCCCTTTAATTTGTAA+TGG | + | chr8_1:65657755-65657774 | None:intergenic | 25.0% |
| !!! | GATATGCATTTTTTGTTGTA+GGG | - | chr8_1:65657913-65657932 | Msa1207840:CDS | 25.0% |
| ! | AAAGTCAATGATGAAAATCA+AGG | + | chr8_1:65658272-65658291 | None:intergenic | 25.0% |
| ! | ACTTTATCCAACATACTATT+TGG | - | chr8_1:65658380-65658399 | Msa1207840:intron | 25.0% |
| ! | TAGTAAACCAAATAGTATGT+TGG | + | chr8_1:65658390-65658409 | None:intergenic | 25.0% |
| ! | TAGTTGTGTATAAAACTTGT+AGG | + | chr8_1:65658459-65658478 | None:intergenic | 25.0% |
| !!! | GATGTAAATTTTCTTGTTTC+AGG | - | chr8_1:65658774-65658793 | Msa1207840:five_prime_UTR | 25.0% |
| !!! | GCAGATGAAATAATTTTTTG+AGG | + | chr8_1:65658800-65658819 | None:intergenic | 25.0% |
| ! | GGTAGGTTTGAAATTTAACA+TGG | + | chr8_1:65654756-65654775 | None:intergenic | 30.0% |
| ACCTACCTTCCATTAAAAAA+AGG | - | chr8_1:65654769-65654788 | Msa1207840:three_prime_UTR | 30.0% | |
| CCTACCTTCCATTAAAAAAA+GGG | - | chr8_1:65654770-65654789 | Msa1207840:three_prime_UTR | 30.0% | |
| CTACCTTCCATTAAAAAAAG+GGG | - | chr8_1:65654771-65654790 | Msa1207840:three_prime_UTR | 30.0% | |
| !!! | TTACCCCTTTTTTTAATGGA+AGG | + | chr8_1:65654777-65654796 | None:intergenic | 30.0% |
| AATGAGTGAATGTCTTCAAA+TGG | + | chr8_1:65654876-65654895 | None:intergenic | 30.0% | |
| TTAGCTGTGGTGTAAAAAAA+AGG | + | chr8_1:65654940-65654959 | None:intergenic | 30.0% | |
| TTGTGTCTATAAGGAAAGAA+AGG | + | chr8_1:65655063-65655082 | None:intergenic | 30.0% | |
| ! | ATTTGTTCCCTATGATTTTG+AGG | - | chr8_1:65655258-65655277 | Msa1207840:CDS | 30.0% |
| GTATGAAACCTCAAAATCAT+AGG | + | chr8_1:65655269-65655288 | None:intergenic | 30.0% | |
| AGAAAGAAGAAAAACCTGTT+GGG | + | chr8_1:65655317-65655336 | None:intergenic | 30.0% | |
| TAACTATTACGTATGAAGCA+TGG | - | chr8_1:65655703-65655722 | Msa1207840:intron | 30.0% | |
| TTATTAGACGTTATGAAGCA+CGG | + | chr8_1:65655788-65655807 | None:intergenic | 30.0% | |
| ! | GCTCTTTGAAAATTAAGTGA+AGG | + | chr8_1:65656022-65656041 | None:intergenic | 30.0% |
| ATCAAAAGGAACAGAAATGA+CGG | + | chr8_1:65656083-65656102 | None:intergenic | 30.0% | |
| !!! | TTGTTGTTTTTATTGGCGAT+TGG | - | chr8_1:65656119-65656138 | Msa1207840:CDS | 30.0% |
| GATTCTGTGTTAGATTAGAT+TGG | - | chr8_1:65656202-65656221 | Msa1207840:CDS | 30.0% | |
| !! | ATTAATGTAGGCTTTGAGAA+AGG | - | chr8_1:65656256-65656275 | Msa1207840:CDS | 30.0% |
| TGTTCAAAATCGATGTTATC+AGG | + | chr8_1:65656368-65656387 | None:intergenic | 30.0% | |
| TTGTATTTCAAGAAGTTACC+TGG | + | chr8_1:65656404-65656423 | None:intergenic | 30.0% | |
| TATTTCTTTGTAGTCACTCA+TGG | + | chr8_1:65656593-65656612 | None:intergenic | 30.0% | |
| CTCTTGTATACAATTTCTCT+AGG | - | chr8_1:65656624-65656643 | Msa1207840:CDS | 30.0% | |
| ATTAAGATTAGGCACTCAAA+AGG | - | chr8_1:65656701-65656720 | Msa1207840:CDS | 30.0% | |
| CTACTAACAGATATTAGTCA+AGG | + | chr8_1:65656810-65656829 | None:intergenic | 30.0% | |
| GTATGTTAGAACAATGAGTT+CGG | - | chr8_1:65656842-65656861 | Msa1207840:CDS | 30.0% | |
| TATCAACAAGTCTGAATTTC+AGG | - | chr8_1:65656993-65657012 | Msa1207840:intron | 30.0% | |
| ! | ACTAGCTTAGATATTCATGT+TGG | - | chr8_1:65657079-65657098 | Msa1207840:intron | 30.0% |
| ! | TGGACAATCTTATTCTTTTC+TGG | - | chr8_1:65657099-65657118 | Msa1207840:intron | 30.0% |
| !! | TTATTCTTTTCTGGTAACCA+TGG | - | chr8_1:65657108-65657127 | Msa1207840:intron | 30.0% |
| TTGCACTATTCAAATTCCAA+GGG | - | chr8_1:65657220-65657239 | Msa1207840:intron | 30.0% | |
| ! | GTTTTGTCAAATTGATCATC+TGG | + | chr8_1:65657274-65657293 | None:intergenic | 30.0% |
| TGCTGACCATTACAAATTAA+AGG | - | chr8_1:65657746-65657765 | Msa1207840:intron | 30.0% | |
| GCTGACCATTACAAATTAAA+GGG | - | chr8_1:65657747-65657766 | Msa1207840:intron | 30.0% | |
| GTAGAAACATCAGTAATCAA+TGG | - | chr8_1:65657819-65657838 | Msa1207840:CDS | 30.0% | |
| ATGCATACTTATCACTTGAA+TGG | - | chr8_1:65657891-65657910 | Msa1207840:CDS | 30.0% | |
| !!! | GGATATGCATTTTTTGTTGT+AGG | - | chr8_1:65657912-65657931 | Msa1207840:CDS | 30.0% |
| !! | TTAAAAAATTGAGGGTACTG+AGG | - | chr8_1:65658302-65658321 | Msa1207840:CDS | 30.0% |
| CAGTTGGTCAAAAGAATTTA+TGG | - | chr8_1:65658338-65658357 | Msa1207840:CDS | 30.0% | |
| ATTTCATCTGCTTCAATCAA+CGG | - | chr8_1:65658809-65658828 | Msa1207840:five_prime_UTR | 30.0% | |
| ! | TTGTTTAGCTTAATGTTCTG+TGG | - | chr8_1:65659042-65659061 | Msa1207840:five_prime_UTR | 30.0% |
| GTGTCCCAAATAATTAAACT+GGG | + | chr8_1:65659070-65659089 | None:intergenic | 30.0% | |
| AGTGTCCCAAATAATTAAAC+TGG | + | chr8_1:65659071-65659090 | None:intergenic | 30.0% | |
| TCATGTATCAAGAATGTGAT+TGG | + | chr8_1:65659132-65659151 | None:intergenic | 30.0% | |
| !!! | GTTTCTATTTTTGGTGAGTC+TGG | + | chr8_1:65654720-65654739 | None:intergenic | 35.0% |
| !!! | CCCTTTTTTTAATGGAAGGT+AGG | + | chr8_1:65654773-65654792 | None:intergenic | 35.0% |
| GTATAGTATGAACTGTCCTT+AGG | - | chr8_1:65654844-65654863 | Msa1207840:three_prime_UTR | 35.0% | |
| !! | AAAAAAGGTGTGTTCTAGAG+TGG | + | chr8_1:65654925-65654944 | None:intergenic | 35.0% |
| GGACTATGAAAGAAAGAAAC+TGG | + | chr8_1:65655042-65655061 | None:intergenic | 35.0% | |
| TTGATGAGAAAGAAGAAGAG+AGG | + | chr8_1:65655199-65655218 | None:intergenic | 35.0% | |
| GAAAGAAGAAAAACCTGTTG+GGG | + | chr8_1:65655316-65655335 | None:intergenic | 35.0% | |
| GAGAAAGAAGAAAAACCTGT+TGG | + | chr8_1:65655318-65655337 | None:intergenic | 35.0% | |
| GTTACATTAATAGTAGGACC+TGG | + | chr8_1:65655564-65655583 | None:intergenic | 35.0% | |
| TGTGAATGTCCACAACAAAT+TGG | - | chr8_1:65655602-65655621 | Msa1207840:intron | 35.0% | |
| !!! | GGTTTTCATCCAATTTGTTG+TGG | + | chr8_1:65655614-65655633 | None:intergenic | 35.0% |
| ATGAAAACCTCCTCATTCAT+TGG | - | chr8_1:65655625-65655644 | Msa1207840:intron | 35.0% | |
| AAACAACCTACCAATGAATG+AGG | + | chr8_1:65655638-65655657 | None:intergenic | 35.0% | |
| ATTGTCCTATTCCACCAAAA+TGG | - | chr8_1:65655942-65655961 | Msa1207840:intron | 35.0% | |
| ! | TTTCAAGTGAAGGATCAGAT+TGG | - | chr8_1:65655980-65655999 | Msa1207840:intron | 35.0% |
| ! | CTTAATTTTCAAAGAGCAGC+TGG | - | chr8_1:65656025-65656044 | Msa1207840:CDS | 35.0% |
| TCAAAAGGAACAGAAATGAC+GGG | + | chr8_1:65656082-65656101 | None:intergenic | 35.0% | |
| ! | TTCTGTTCCTTTTGATACTC+CGG | - | chr8_1:65656087-65656106 | Msa1207840:CDS | 35.0% |
| !!! | GGGGACATTGTTGTTTTTAT+TGG | - | chr8_1:65656112-65656131 | Msa1207840:CDS | 35.0% |
| !! | TGTTGTTTGAGTTGAGTTTG+TGG | - | chr8_1:65656170-65656189 | Msa1207840:CDS | 35.0% |
| !! | CTAGATGATGGAAAAGATCT+TGG | - | chr8_1:65656281-65656300 | Msa1207840:CDS | 35.0% |
| GAACAAATTGATGTCAAACC+AGG | - | chr8_1:65656383-65656402 | Msa1207840:intron | 35.0% | |
| GTATACAATTTCTCTAGGCA+TGG | - | chr8_1:65656629-65656648 | Msa1207840:CDS | 35.0% | |
| ATGTTGTGCTTCTTAATGCA+TGG | - | chr8_1:65656731-65656750 | Msa1207840:CDS | 35.0% | |
| AAGGTATATGAAGACCATAG+AGG | + | chr8_1:65656791-65656810 | None:intergenic | 35.0% | |
| CAACATTATGTACACGAAGT+CGG | + | chr8_1:65656970-65656989 | None:intergenic | 35.0% | |
| TCTCTGCTAGAAGTAAGTTA+TGG | + | chr8_1:65657027-65657046 | None:intergenic | 35.0% | |
| CTTGCACTATTCAAATTCCA+AGG | - | chr8_1:65657219-65657238 | Msa1207840:intron | 35.0% | |
| TGCACTATTCAAATTCCAAG+GGG | - | chr8_1:65657221-65657240 | Msa1207840:intron | 35.0% | |
| TGTCTCATTTACTTACGCTT+CGG | - | chr8_1:65657364-65657383 | Msa1207840:intron | 35.0% | |
| !! | CACTCATTTTTGCAATTCTG+TGG | - | chr8_1:65657534-65657553 | Msa1207840:CDS | 35.0% |
| TCTGTGGTTTATTGTGTAGA+TGG | - | chr8_1:65657550-65657569 | Msa1207840:CDS | 35.0% | |
| ! | GTAATCAATGGAAGCTTTAG+AGG | - | chr8_1:65657831-65657850 | Msa1207840:CDS | 35.0% |
| !! | TGGAAGCTTTAGAGGATTTA+TGG | - | chr8_1:65657839-65657858 | Msa1207840:CDS | 35.0% |
| CAAGTGATAAGTATGCATCT+TGG | + | chr8_1:65657889-65657908 | None:intergenic | 35.0% | |
| AGTGTAACATCATGCAAGTA+AGG | + | chr8_1:65657951-65657970 | None:intergenic | 35.0% | |
| AAACGCTTGAATCATGAGTT+TGG | + | chr8_1:65658226-65658245 | None:intergenic | 35.0% | |
| ! | AGGATGAAATCTAGTTCAGT+TGG | - | chr8_1:65658322-65658341 | Msa1207840:CDS | 35.0% |
| GAACAGAAAACCTTGATTCA+TGG | - | chr8_1:65658568-65658587 | Msa1207840:intron | 35.0% | |
| AACCTTGATTCATGGTATCT+TGG | - | chr8_1:65658576-65658595 | Msa1207840:intron | 35.0% | |
| TTGGTCAAGAAACATACATC+AGG | - | chr8_1:65658595-65658614 | Msa1207840:intron | 35.0% | |
| TGGTCAAGAAACATACATCA+GGG | - | chr8_1:65658596-65658615 | Msa1207840:intron | 35.0% | |
| !!! | GGTAACTCAGTTTTGTTAGT+AGG | + | chr8_1:65658636-65658655 | None:intergenic | 35.0% |
| TTTCATCTGCTTCAATCAAC+GGG | - | chr8_1:65658810-65658829 | Msa1207840:five_prime_UTR | 35.0% | |
| ! | GCTGAAGTTGTTATTCACTT+TGG | - | chr8_1:65658838-65658857 | Msa1207840:five_prime_UTR | 35.0% |
| CGCAATCAACTAATTAAGAG+AGG | + | chr8_1:65658920-65658939 | None:intergenic | 35.0% | |
| TTAGTTGATTGCGAAGAGTT+TGG | - | chr8_1:65658927-65658946 | Msa1207840:five_prime_UTR | 35.0% | |
| TGGCTCCCAGTTTAATTATT+TGG | - | chr8_1:65659062-65659081 | Msa1207840:five_prime_UTR | 35.0% | |
| GGCTCCCAGTTTAATTATTT+GGG | - | chr8_1:65659063-65659082 | Msa1207840:five_prime_UTR | 35.0% | |
| ATACATGAAACTTGCCAACA+CGG | - | chr8_1:65659144-65659163 | Msa1207840:five_prime_UTR | 35.0% | |
| ! | GATGAAAGGAAAGTATGAAG+TGG | + | chr8_1:65659173-65659192 | None:intergenic | 35.0% |
| !!! | TCTATTTTTGGTGAGTCTGG+CGG | + | chr8_1:65654717-65654736 | None:intergenic | 40.0% |
| !!! | AAGGGTTGTCTTTTTAGCTG+TGG | + | chr8_1:65654953-65654972 | None:intergenic | 40.0% |
| GGTGAAGAAGCCATTGAATA+TGG | + | chr8_1:65655178-65655197 | None:intergenic | 40.0% | |
| GCTATCAACAAACAGTTTCC+AGG | - | chr8_1:65655543-65655562 | Msa1207840:intron | 40.0% | |
| !! | CACAGCAACATTGTTGTTTG+TGG | + | chr8_1:65655586-65655605 | None:intergenic | 40.0% |
| AAACCTCCTCATTCATTGGT+AGG | - | chr8_1:65655629-65655648 | Msa1207840:intron | 40.0% | |
| ! | ATTGGTGGTTGAAATAGGTC+TGG | - | chr8_1:65655872-65655891 | Msa1207840:CDS | 40.0% |
| ! | TTGGTGGTTGAAATAGGTCT+GGG | - | chr8_1:65655873-65655892 | Msa1207840:CDS | 40.0% |
| !! | CAGTTCCATTTTGGTGGAAT+AGG | + | chr8_1:65655950-65655969 | None:intergenic | 40.0% |
| CTATTCCACCAAAATGGAAC+TGG | - | chr8_1:65655948-65655967 | Msa1207840:intron | 40.0% | |
| ! | TAAGTCCAGTTCCATTTTGG+TGG | + | chr8_1:65655956-65655975 | None:intergenic | 40.0% |
| ! | TGGTAAGTCCAGTTCCATTT+TGG | + | chr8_1:65655959-65655978 | None:intergenic | 40.0% |
| ! | GACTTACCAGTTTCAAGTGA+AGG | - | chr8_1:65655970-65655989 | Msa1207840:intron | 40.0% |
| TCTGATCCTTCACTTGAAAC+TGG | + | chr8_1:65655979-65655998 | None:intergenic | 40.0% | |
| ! | AATTTTCAAAGAGCAGCTGG+TGG | - | chr8_1:65656028-65656047 | Msa1207840:CDS | 40.0% |
| ! | TTCCTTTTGATACTCCGGAA+GGG | - | chr8_1:65656092-65656111 | Msa1207840:CDS | 40.0% |
| AAAACAACAATGTCCCCTTC+CGG | + | chr8_1:65656109-65656128 | None:intergenic | 40.0% | |
| !! | TTGAGAAAGGCTCTAGATGA+TGG | - | chr8_1:65656269-65656288 | Msa1207840:CDS | 40.0% |
| AAAGATCTTGGAATGCCAGA+TGG | - | chr8_1:65656293-65656312 | Msa1207840:CDS | 40.0% | |
| CAGATGGTGTTCTCATCAAT+GGG | - | chr8_1:65656309-65656328 | Msa1207840:CDS | 40.0% | |
| ! | GCACTCAAAGTTTTCCTCTA+TGG | - | chr8_1:65656774-65656793 | Msa1207840:CDS | 40.0% |
| CGACTTCGTGTACATAATGT+TGG | - | chr8_1:65656968-65656987 | Msa1207840:intron | 40.0% | |
| TTACTTCTAGCAGAGACTGA+AGG | - | chr8_1:65657031-65657050 | Msa1207840:intron | 40.0% | |
| TGAACTTGCATTCTGATCCA+TGG | + | chr8_1:65657128-65657147 | None:intergenic | 40.0% | |
| ACGTGATTCATTCACAAACC+TGG | + | chr8_1:65657173-65657192 | None:intergenic | 40.0% | |
| GGTTTGTGAATGAATCACGT+TGG | - | chr8_1:65657173-65657192 | Msa1207840:intron | 40.0% | |
| TCAAATTGATCATCTGGACC+CGG | + | chr8_1:65657268-65657287 | None:intergenic | 40.0% | |
| TGAACCAAGCAAGATCTATC+AGG | - | chr8_1:65657302-65657321 | Msa1207840:intron | 40.0% | |
| CTGAAAGATCCTTGTGGATT+TGG | + | chr8_1:65657600-65657619 | None:intergenic | 40.0% | |
| CCATATCTGAAAGATCCTTG+TGG | + | chr8_1:65657606-65657625 | None:intergenic | 40.0% | |
| CCACAAGGATCTTTCAGATA+TGG | - | chr8_1:65657603-65657622 | Msa1207840:CDS | 40.0% | |
| GTAAATCTCTGTCACGTTGA+TGG | + | chr8_1:65657631-65657650 | None:intergenic | 40.0% | |
| AAACCACCAGTGAAAATCGA+TGG | - | chr8_1:65657663-65657682 | Msa1207840:intron | 40.0% | |
| AACCACCAGTGAAAATCGAT+GGG | - | chr8_1:65657664-65657683 | Msa1207840:intron | 40.0% | |
| ! | ATTACTGATGTTTCTACCCG+AGG | + | chr8_1:65657816-65657835 | None:intergenic | 40.0% |
| !!! | CAAGTTTTGAGTGTTGCTGA+CGG | + | chr8_1:65657988-65658007 | None:intergenic | 40.0% |
| ! | AAACTTGATCCATTGACTGC+AGG | - | chr8_1:65658001-65658020 | Msa1207840:CDS | 40.0% |
| !! | AGATTGGTCTGAGAATAGCA+GGG | - | chr8_1:65658035-65658054 | Msa1207840:intron | 40.0% |
| ! | CAGGGGTACATATAACAAGT+GGG | - | chr8_1:65658053-65658072 | Msa1207840:intron | 40.0% |
| GGTACATATAACAAGTGGGA+TGG | - | chr8_1:65658057-65658076 | Msa1207840:intron | 40.0% | |
| TAAACCTAAACAGACGGCAA+GGG | + | chr8_1:65658489-65658508 | None:intergenic | 40.0% | |
| ATAAACCTAAACAGACGGCA+AGG | + | chr8_1:65658490-65658509 | None:intergenic | 40.0% | |
| CCAGGATAAACCTAAACAGA+CGG | + | chr8_1:65658495-65658514 | None:intergenic | 40.0% | |
| ! | TTTAGGTTTATCCTGGAGCA+TGG | - | chr8_1:65658499-65658518 | Msa1207840:intron | 40.0% |
| GACCAAGATACCATGAATCA+AGG | + | chr8_1:65658581-65658600 | None:intergenic | 40.0% | |
| !!! | TCAGTTTTGTTAGTAGGCTC+CGG | + | chr8_1:65658630-65658649 | None:intergenic | 40.0% |
| CTGAAGTCTGCCACATTTAA+GGG | + | chr8_1:65658673-65658692 | None:intergenic | 40.0% | |
| CTTCAAATGGTGACAGCCTA+AGG | + | chr8_1:65654863-65654882 | None:intergenic | 45.0% | |
| ATTGGAGAAGTGGTGTGGAA+GGG | + | chr8_1:65654971-65654990 | None:intergenic | 45.0% | |
| AGAGAGAGAGATTGGAGAAG+TGG | + | chr8_1:65654981-65655000 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGAT+TGG | + | chr8_1:65654989-65655008 | None:intergenic | 45.0% | |
| ! | CAGCTGAAGAGAGTGTAAGA+AGG | + | chr8_1:65655231-65655250 | None:intergenic | 45.0% |
| TACATCACTGCTTCTCCTCT+TGG | - | chr8_1:65655286-65655305 | Msa1207840:CDS | 45.0% | |
| CAACCTACCAATGAATGAGG+AGG | + | chr8_1:65655635-65655654 | None:intergenic | 45.0% | |
| GCATGGACACTCCTCATATT+AGG | - | chr8_1:65655720-65655739 | Msa1207840:intron | 45.0% | |
| GACGTTATGAAGCACGGATA+CGG | + | chr8_1:65655782-65655801 | None:intergenic | 45.0% | |
| TGGTGGTTGAAATAGGTCTG+GGG | - | chr8_1:65655874-65655893 | Msa1207840:CDS | 45.0% | |
| TTCAGCAAAGGAGGAGTTCA+TGG | - | chr8_1:65655897-65655916 | Msa1207840:intron | 45.0% | |
| TCATGGCAAGATGGTGTTCT+TGG | - | chr8_1:65655914-65655933 | Msa1207840:intron | 45.0% | |
| !! | AAGGAACAGAAATGACGGGT+CGG | + | chr8_1:65656078-65656097 | None:intergenic | 45.0% |
| ! | GTTCCTTTTGATACTCCGGA+AGG | - | chr8_1:65656091-65656110 | Msa1207840:CDS | 45.0% |
| ! | TCCTTTTGATACTCCGGAAG+GGG | - | chr8_1:65656093-65656112 | Msa1207840:CDS | 45.0% |
| TTGGTACACACGCAATCACA+CGG | - | chr8_1:65656138-65656157 | Msa1207840:CDS | 45.0% | |
| CCATTGATGAGAACACCATC+TGG | + | chr8_1:65656311-65656330 | None:intergenic | 45.0% | |
| CCAGATGGTGTTCTCATCAA+TGG | - | chr8_1:65656308-65656327 | Msa1207840:CDS | 45.0% | |
| GGTGTTCTCATCAATGGGAA+AGG | - | chr8_1:65656314-65656333 | Msa1207840:CDS | 45.0% | |
| AATTCCAAGGGGAAAGCAAG+AGG | - | chr8_1:65657232-65657251 | Msa1207840:intron | 45.0% | |
| AGCAAGAGGTCATTTACCAC+CGG | - | chr8_1:65657246-65657265 | Msa1207840:intron | 45.0% | |
| GAGACCTGATAGATCTTGCT+TGG | + | chr8_1:65657309-65657328 | None:intergenic | 45.0% | |
| AGATGGAACGTATCAGCAAG+TGG | - | chr8_1:65657567-65657586 | Msa1207840:CDS | 45.0% | |
| !!! | TTCCCATCGATTTTCACTGG+TGG | + | chr8_1:65657669-65657688 | None:intergenic | 45.0% |
| CAGTGAAAATCGATGGGAAG+CGG | - | chr8_1:65657670-65657689 | Msa1207840:intron | 45.0% | |
| TAATGGTCAGCAAGCCTGAT+TGG | + | chr8_1:65657738-65657757 | None:intergenic | 45.0% | |
| ! | TTGATCCATTGACTGCAGGA+TGG | - | chr8_1:65658005-65658024 | Msa1207840:CDS | 45.0% |
| ! | ATTGACTGCAGGATGGACTT+CGG | - | chr8_1:65658012-65658031 | Msa1207840:CDS | 45.0% |
| !! | GAGATTGGTCTGAGAATAGC+AGG | - | chr8_1:65658034-65658053 | Msa1207840:intron | 45.0% |
| !! | GATTGGTCTGAGAATAGCAG+GGG | - | chr8_1:65658036-65658055 | Msa1207840:intron | 45.0% |
| ! | GCAGGGGTACATATAACAAG+TGG | - | chr8_1:65658052-65658071 | Msa1207840:intron | 45.0% |
| !! | GCTCGCTTGTTGTAAAAGAG+TGG | + | chr8_1:65658180-65658199 | None:intergenic | 45.0% |
| ! | CCGTCTGTTTAGGTTTATCC+TGG | - | chr8_1:65658492-65658511 | Msa1207840:intron | 45.0% |
| CCAAACTCCAACATTGTCGA+GGG | + | chr8_1:65658541-65658560 | None:intergenic | 45.0% | |
| TCCAAACTCCAACATTGTCG+AGG | + | chr8_1:65658542-65658561 | None:intergenic | 45.0% | |
| ATACATCAGGGTTGTCAACC+CGG | - | chr8_1:65658608-65658627 | Msa1207840:intron | 45.0% | |
| !!! | CAGTTTTGTTAGTAGGCTCC+GGG | + | chr8_1:65658629-65658648 | None:intergenic | 45.0% |
| !! | TTAAGGGCATTGTCTGGCAT+CGG | + | chr8_1:65658657-65658676 | None:intergenic | 45.0% |
| !! | CCACATTTAAGGGCATTGTC+TGG | + | chr8_1:65658663-65658682 | None:intergenic | 45.0% |
| CCAGACAATGCCCTTAAATG+TGG | - | chr8_1:65658660-65658679 | Msa1207840:CDS | 45.0% | |
| GCTGAAGTCTGCCACATTTA+AGG | + | chr8_1:65658674-65658693 | None:intergenic | 45.0% | |
| TCTGCTTCAATCAACGGGAA+TGG | - | chr8_1:65658815-65658834 | Msa1207840:five_prime_UTR | 45.0% | |
| CTGCTTCAATCAACGGGAAT+GGG | - | chr8_1:65658816-65658835 | Msa1207840:five_prime_UTR | 45.0% | |
| !! | TTGCGAAGAGTTTGGCTTGT+TGG | - | chr8_1:65658935-65658954 | Msa1207840:five_prime_UTR | 45.0% |
| !! | TGGCTTGTTGGTGAGATTTG+TGG | - | chr8_1:65658947-65658966 | Msa1207840:five_prime_UTR | 45.0% |
| GTATGAAGTGGAAACCGTGT+TGG | + | chr8_1:65659161-65659180 | None:intergenic | 45.0% | |
| !!! | TAAAAGTTTATTTTTTTTAT+TGG | - | chr8_1:65655854-65655873 | Msa1207840:CDS | 5.0% |
| TAGAGTGGACACTGGATGGA+TGG | + | chr8_1:65654910-65654929 | None:intergenic | 50.0% | |
| !! | GTTCTAGAGTGGACACTGGA+TGG | + | chr8_1:65654914-65654933 | None:intergenic | 50.0% |
| !! | GTGTGTTCTAGAGTGGACAC+TGG | + | chr8_1:65654918-65654937 | None:intergenic | 50.0% |
| GATTGGAGAAGTGGTGTGGA+AGG | + | chr8_1:65654972-65654991 | None:intergenic | 50.0% | |
| GAGAGATTGGAGAAGTGGTG+TGG | + | chr8_1:65654976-65654995 | None:intergenic | 50.0% | |
| TCCTCATATTAGGCGTGTCC+CGG | - | chr8_1:65655730-65655749 | Msa1207840:intron | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | + | chr8_1:65655776-65655795 | None:intergenic | 50.0% | |
| ! | ATAGGTCTGGGGTTCAGCAA+AGG | - | chr8_1:65655885-65655904 | Msa1207840:CDS | 50.0% |
| AGGAGGAGTTCATGGCAAGA+TGG | - | chr8_1:65655905-65655924 | Msa1207840:intron | 50.0% | |
| !! | CAAAGAGCAGCTGGTGGATT+TGG | - | chr8_1:65656034-65656053 | Msa1207840:CDS | 50.0% |
| ! | TCCCCTTCCGGAGTATCAAA+AGG | + | chr8_1:65656097-65656116 | None:intergenic | 50.0% |
| ACTACATTGTCGCAAGTGCC+AGG | - | chr8_1:65657152-65657171 | Msa1207840:intron | 50.0% | |
| TCACGTTGGCAACGAGTTAC+TGG | - | chr8_1:65657187-65657206 | Msa1207840:intron | 50.0% | |
| TGGCAACGAGTTACTGGAGT+TGG | - | chr8_1:65657193-65657212 | Msa1207840:intron | 50.0% | |
| ATGACCTCTTGCTTTCCCCT+TGG | + | chr8_1:65657239-65657258 | None:intergenic | 50.0% | |
| GCAAGAGGTCATTTACCACC+GGG | - | chr8_1:65657247-65657266 | Msa1207840:intron | 50.0% | |
| AATTGATCATCTGGACCCGG+TGG | + | chr8_1:65657265-65657284 | None:intergenic | 50.0% | |
| !!! | CGCTTCCCATCGATTTTCAC+TGG | + | chr8_1:65657672-65657691 | None:intergenic | 50.0% |
| AAGCGGAGAGCAACACTTAG+TGG | - | chr8_1:65657687-65657706 | Msa1207840:intron | 50.0% | |
| TTTCCCACGAAGCCTCTAAC+CGG | - | chr8_1:65657786-65657805 | Msa1207840:CDS | 50.0% | |
| ! | ACTGATGTTTCTACCCGAGG+AGG | + | chr8_1:65657813-65657832 | None:intergenic | 50.0% |
| GAAGTCCATCCTGCAGTCAA+TGG | + | chr8_1:65658013-65658032 | None:intergenic | 50.0% | |
| AATAGCTCGTACTACAGCGC+AGG | - | chr8_1:65658080-65658099 | Msa1207840:intron | 50.0% | |
| GATTCCCTTGCCGTCTGTTT+AGG | - | chr8_1:65658482-65658501 | Msa1207840:intron | 50.0% | |
| AAAACTGCTGTCCATGCTCC+AGG | + | chr8_1:65658513-65658532 | None:intergenic | 50.0% | |
| ! | TGGAGCATGGACAGCAGTTT+TGG | - | chr8_1:65658512-65658531 | Msa1207840:intron | 50.0% |
| TTGGTCTCCCTCGACAATGT+TGG | - | chr8_1:65658531-65658550 | Msa1207840:intron | 50.0% | |
| CCCTCGACAATGTTGGAGTT+TGG | - | chr8_1:65658538-65658557 | Msa1207840:intron | 50.0% | |
| ! | TCCTCTTGGAGTACCCCAAC+AGG | - | chr8_1:65655300-65655319 | Msa1207840:CDS | 55.0% |
| ! | ACCTGTTGGGGTACTCCAAG+AGG | + | chr8_1:65655304-65655323 | None:intergenic | 55.0% |
| ACCGGGACACGCCTAATATG+AGG | + | chr8_1:65655734-65655753 | None:intergenic | 55.0% | |
| TATTAGGCGTGTCCCGGTGT+CGG | - | chr8_1:65655736-65655755 | Msa1207840:intron | 55.0% | |
| !! | AGAGCAGCTGGTGGATTTGG+TGG | - | chr8_1:65656037-65656056 | Msa1207840:CDS | 55.0% |
| GGTGCTCGTCCAAATCCACA+AGG | - | chr8_1:65657588-65657607 | Msa1207840:CDS | 55.0% | |
| CCTGATTGGAGTGGCAGGAT+TGG | + | chr8_1:65657724-65657743 | None:intergenic | 55.0% | |
| CCAATCCTGCCACTCCAATC+AGG | - | chr8_1:65657721-65657740 | Msa1207840:intron | 55.0% | |
| GTCAGCAAGCCTGATTGGAG+TGG | + | chr8_1:65657733-65657752 | None:intergenic | 55.0% | |
| ! | TGTTTCTACCCGAGGAGGTC+CGG | + | chr8_1:65657808-65657827 | None:intergenic | 55.0% |
| ! | GCAGGATGGACTTCGGAGAT+TGG | - | chr8_1:65658019-65658038 | Msa1207840:CDS | 55.0% |
| ACTGACGTGTCTCCGACACC+GGG | + | chr8_1:65655751-65655770 | None:intergenic | 60.0% | |
| CACTGACGTGTCTCCGACAC+CGG | + | chr8_1:65655752-65655771 | None:intergenic | 60.0% | |
| ! | GGTCTGGGGTTCAGCAAAGG+AGG | - | chr8_1:65655888-65655907 | Msa1207840:CDS | 60.0% |
| GCAAGCCTGATTGGAGTGGC+AGG | + | chr8_1:65657729-65657748 | None:intergenic | 60.0% | |
| GGTCCGGTTAGAGGCTTCGT+GGG | + | chr8_1:65657792-65657811 | None:intergenic | 60.0% | |
| AGGTCCGGTTAGAGGCTTCG+TGG | + | chr8_1:65657793-65657812 | None:intergenic | 60.0% | |
| AGCCTCTAACCGGACCTCCT+CGG | - | chr8_1:65657796-65657815 | Msa1207840:CDS | 60.0% | |
| GCCTCTAACCGGACCTCCTC+GGG | - | chr8_1:65657797-65657816 | Msa1207840:CDS | 65.0% | |
| ACCCGAGGAGGTCCGGTTAG+AGG | + | chr8_1:65657801-65657820 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 65654713 | 65659220 | 65654713 | ID=Msa1207840;Name=Msa1207840 |
| chr8_1 | mRNA | 65654713 | 65659220 | 65654713 | ID=Msa1207840-mRNA-1;Parent=Msa1207840;Name=Msa1207840-mRNA-1;_AED=0.05;_eAED=0.05;_QI=471|1|1|1|1|1|9|322|590 |
| chr8_1 | exon | 65654713 | 65655137 | 65654713 | ID=Msa1207840-mRNA-1:exon:21549;Parent=Msa1207840-mRNA-1 |
| chr8_1 | exon | 65655230 | 65655429 | 65655230 | ID=Msa1207840-mRNA-1:exon:21548;Parent=Msa1207840-mRNA-1 |
| chr8_1 | exon | 65655832 | 65655910 | 65655832 | ID=Msa1207840-mRNA-1:exon:21547;Parent=Msa1207840-mRNA-1 |
| chr8_1 | exon | 65655999 | 65656364 | 65655999 | ID=Msa1207840-mRNA-1:exon:21546;Parent=Msa1207840-mRNA-1 |
| chr8_1 | exon | 65656610 | 65656976 | 65656610 | ID=Msa1207840-mRNA-1:exon:21545;Parent=Msa1207840-mRNA-1 |
| chr8_1 | exon | 65657529 | 65657667 | 65657529 | ID=Msa1207840-mRNA-1:exon:21544;Parent=Msa1207840-mRNA-1 |
| chr8_1 | exon | 65657774 | 65658044 | 65657774 | ID=Msa1207840-mRNA-1:exon:21543;Parent=Msa1207840-mRNA-1 |
| chr8_1 | exon | 65658287 | 65658396 | 65658287 | ID=Msa1207840-mRNA-1:exon:21542;Parent=Msa1207840-mRNA-1 |
| chr8_1 | exon | 65658612 | 65659220 | 65658612 | ID=Msa1207840-mRNA-1:exon:21541;Parent=Msa1207840-mRNA-1 |
| chr8_1 | five_prime_UTR | 65658750 | 65659220 | 65658750 | ID=Msa1207840-mRNA-1:five_prime_utr;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65658612 | 65658749 | 65658612 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65658287 | 65658396 | 65658287 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65657774 | 65658044 | 65657774 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65657529 | 65657667 | 65657529 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65656610 | 65656976 | 65656610 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65655999 | 65656364 | 65655999 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65655832 | 65655910 | 65655832 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65655230 | 65655429 | 65655230 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | CDS | 65655035 | 65655137 | 65655035 | ID=Msa1207840-mRNA-1:cds;Parent=Msa1207840-mRNA-1 |
| chr8_1 | three_prime_UTR | 65654713 | 65655034 | 65654713 | ID=Msa1207840-mRNA-1:three_prime_utr;Parent=Msa1207840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
