Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622470 | ABN05684.1 | 98.239 | 284 | 5 | 0 | 1 | 284 | 1 | 284 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622470 | sp|Q2R4J1|GDT13_ORYSJ | 78.244 | 262 | 53 | 1 | 26 | 283 | 18 | 279 | 9.17e-136 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622470 | A2Q167 | 98.239 | 284 | 5 | 0 | 1 | 284 | 1 | 284 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030130 | Msa0622470 | 0.805987 | 1.023692e-49 | -8.615850e-47 |
| Msa0098470 | Msa0622470 | 0.822803 | 1.947902e-53 | -8.615850e-47 |
| Msa0622470 | Msa1028870 | 0.821784 | 3.357971e-53 | -8.615850e-47 |
| Msa0622470 | Msa1031390 | 0.803027 | 4.239866e-49 | -8.615850e-47 |
| Msa0622470 | Msa1067990 | 0.830160 | 3.434409e-55 | -8.615850e-47 |
| Msa0622470 | Msa1373170 | 0.806283 | 8.868825e-50 | -8.615850e-47 |
| Msa0435370 | Msa0622470 | 0.804083 | 2.561404e-49 | -8.615850e-47 |
| Msa0435570 | Msa0622470 | 0.805090 | 1.578631e-49 | -8.615850e-47 |
| Msa0590640 | Msa0622470 | 0.828568 | 8.364288e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622470 | MtrunA17_Chr7g0249231 | 98.239 | 284 | 5 | 0 | 1 | 284 | 1 | 284 | 0.0 | 561 |
| Msa0622470 | MtrunA17_Chr1g0210221 | 40.351 | 228 | 109 | 3 | 74 | 281 | 6 | 226 | 1.00e-51 | 169 |
| Msa0622470 | MtrunA17_Chr1g0169451 | 41.232 | 211 | 117 | 2 | 76 | 279 | 152 | 362 | 1.42e-41 | 147 |
| Msa0622470 | MtrunA17_Chr5g0397071 | 36.019 | 211 | 114 | 5 | 82 | 279 | 145 | 347 | 2.14e-28 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622470 | AT5G36290.1 | 73.852 | 283 | 62 | 5 | 13 | 283 | 11 | 293 | 2.42e-132 | 377 |
| Msa0622470 | AT5G36290.2 | 73.852 | 283 | 62 | 5 | 13 | 283 | 11 | 293 | 2.42e-132 | 377 |
| Msa0622470 | AT1G68650.1 | 43.946 | 223 | 111 | 2 | 72 | 281 | 4 | 225 | 9.74e-56 | 179 |
| Msa0622470 | AT1G25520.1 | 41.991 | 231 | 100 | 2 | 72 | 278 | 4 | 224 | 3.08e-55 | 178 |
| Msa0622470 | AT4G13590.1 | 40.741 | 216 | 111 | 4 | 76 | 279 | 146 | 356 | 1.23e-41 | 147 |
| Msa0622470 | AT4G13590.2 | 40.741 | 216 | 111 | 4 | 76 | 279 | 146 | 356 | 1.36e-41 | 147 |
| Msa0622470 | AT1G64150.1 | 34.559 | 272 | 143 | 8 | 27 | 274 | 101 | 361 | 5.79e-25 | 102 |
Find 109 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTCTTCTGTGAAGATTT+TGG | 0.120668 | 4_2:+74902685 | None:intergenic |
| GTTGTCTTTGTTGTAGAATT+TGG | 0.160892 | 4_2:-74901539 | Msa0622470:three_prime_UTR |
| TGCTTCTTTGAAATCAAATT+TGG | 0.183884 | 4_2:+74903099 | None:intergenic |
| CATTGTTATTGTCATTATTT+TGG | 0.214461 | 4_2:-74901421 | Msa0622470:three_prime_UTR |
| TCTCTTAGCTTGGATTCTTC+TGG | 0.261688 | 4_2:-74904296 | Msa0622470:CDS |
| CAAAATCTTATATTCCAATT+AGG | 0.264772 | 4_2:+74901483 | None:intergenic |
| TTTGAAGACTCCCTTCCTTT+TGG | 0.273104 | 4_2:-74901357 | Msa0622470:three_prime_UTR |
| TAGGAAAGTTCGATCCTAAT+TGG | 0.295140 | 4_2:-74901497 | Msa0622470:three_prime_UTR |
| TTGTCTTTGTTGTAGAATTT+GGG | 0.312632 | 4_2:-74901538 | Msa0622470:three_prime_UTR |
| ATTTATTATAGCAGCTCTTA+TGG | 0.317879 | 4_2:-74903395 | Msa0622470:CDS |
| AAAGTAGCAACAACCGTGTT+TGG | 0.345145 | 4_2:-74904927 | Msa0622470:five_prime_UTR |
| AAGAAGAAAATTAGAAAGTA+AGG | 0.349891 | 4_2:+74904795 | None:intergenic |
| ATCATTTAAATCGTGTTTGT+TGG | 0.352507 | 4_2:+74901249 | None:intergenic |
| TTTATATTCATAGGATTCTC+TGG | 0.357110 | 4_2:-74904494 | Msa0622470:intron |
| AAGTAGCAACAACCGTGTTT+GGG | 0.359801 | 4_2:-74904926 | Msa0622470:five_prime_UTR |
| AATTAGGATCGAACTTTCCT+AGG | 0.363531 | 4_2:+74901499 | None:intergenic |
| AGCTTGGATTCTTCTGGTGT+TGG | 0.387172 | 4_2:-74904290 | Msa0622470:CDS |
| TTCGGTCATTTCTCTTAGCT+TGG | 0.388909 | 4_2:-74904306 | Msa0622470:CDS |
| TACGACTGCTGTACATTGCT+TGG | 0.393896 | 4_2:-74902717 | Msa0622470:CDS |
| CCTAAGTCAATTGTCTTGTC+TGG | 0.404108 | 4_2:-74903361 | Msa0622470:CDS |
| TTACTGCAATTGTCGCAATC+TGG | 0.411024 | 4_2:+74901998 | None:intergenic |
| CCGGTAGTGGGATCTGGTTA+TGG | 0.415994 | 4_2:+74904823 | None:intergenic |
| GTAGCAGCTGGGGCCACCAT+AGG | 0.426028 | 4_2:-74901784 | Msa0622470:CDS |
| GTCCATTAGGTACTTTCTAC+AGG | 0.433115 | 4_2:-74903138 | Msa0622470:intron |
| TGCATGACTATCTATTGAAA+TGG | 0.438461 | 4_2:+74901298 | None:intergenic |
| GACAAGGGAAAACTTCATTT+CGG | 0.446559 | 4_2:-74902181 | Msa0622470:CDS |
| GTAGATCCGGTAGTGGGATC+TGG | 0.462407 | 4_2:+74904817 | None:intergenic |
| ATCTTCACAGAAGAAAGAAA+TGG | 0.475060 | 4_2:-74902680 | Msa0622470:CDS |
| GTCGGTGGTCTTCTCTTCCT+AGG | 0.477783 | 4_2:-74901682 | Msa0622470:CDS |
| GACAGTGGCTACAGAGCGTT+GGG | 0.479778 | 4_2:+74901702 | None:intergenic |
| AATGCAATCGGAGTAGCAGC+TGG | 0.484261 | 4_2:-74901796 | Msa0622470:CDS |
| GTTTGGGGATCTTGCATCGA+AGG | 0.485451 | 4_2:-74904910 | Msa0622470:five_prime_UTR |
| ACTTACCGTCATTATAATCA+AGG | 0.489547 | 4_2:+74903327 | None:intergenic |
| ATTAGAAAGTAAGGTAGATC+CGG | 0.490579 | 4_2:+74904804 | None:intergenic |
| ATTCTCTGGCTCACGACGAC+AGG | 0.492028 | 4_2:-74904480 | Msa0622470:CDS |
| TTCAACGATGTGTGGAGAGA+AGG | 0.496951 | 4_2:+74901381 | None:intergenic |
| CTCTAGATTAATACAAGTGC+TGG | 0.497882 | 4_2:-74901630 | Msa0622470:exon |
| GCTAAATTCCAAAATCCAAA+AGG | 0.501607 | 4_2:+74901342 | None:intergenic |
| GCACTACGATTCAACATCAA+TGG | 0.507707 | 4_2:-74904636 | Msa0622470:CDS |
| CACGACGACAGGCAAGAATC+CGG | 0.512240 | 4_2:-74904469 | Msa0622470:CDS |
| GCGTTGAATGATATAGAGAA+TGG | 0.513923 | 4_2:-74904329 | Msa0622470:CDS |
| CATACAAATAGTGCTGCTAC+AGG | 0.516828 | 4_2:-74903078 | Msa0622470:intron |
| TAGCAGCTGGGGCCACCATA+GGG | 0.516894 | 4_2:-74901783 | Msa0622470:CDS |
| CGTCGTTCAAACCTTCGCTC+AGG | 0.518400 | 4_2:-74904580 | Msa0622470:intron |
| GAGGAAGCATGCTGGCATCT+AGG | 0.521221 | 4_2:-74901729 | Msa0622470:CDS |
| ATGAAGACAAAGAAAAGCCT+AGG | 0.528533 | 4_2:+74901665 | None:intergenic |
| ATGTACCTCAGTGGCAGTGG+TGG | 0.534768 | 4_2:-74901752 | Msa0622470:CDS |
| CAATTGTCGCAATCTGGCTA+CGG | 0.543283 | 4_2:+74902004 | None:intergenic |
| ATGCAATCGGAGTAGCAGCT+GGG | 0.543597 | 4_2:-74901795 | Msa0622470:CDS |
| CGACAGTGGCTACAGAGCGT+TGG | 0.546302 | 4_2:+74901701 | None:intergenic |
| TCCGGTGGATCTGTGGATCT+CGG | 0.548999 | 4_2:-74904451 | Msa0622470:CDS |
| TTTAACATTCCTTGCTGAGT+GGG | 0.550817 | 4_2:-74902031 | Msa0622470:CDS |
| GATTGCGTGAATTGAAATGA+AGG | 0.552253 | 4_2:+74904873 | None:intergenic |
| ATTAGGATCGAACTTTCCTA+GGG | 0.552495 | 4_2:+74901500 | None:intergenic |
| AATTCCAAAATCCAAAAGGA+AGG | 0.552541 | 4_2:+74901346 | None:intergenic |
| GCAGAGGAGAAGAACGAAAA+CGG | 0.558746 | 4_2:+74904605 | None:intergenic |
| AGTGGTGGGAGGAAGCATGC+TGG | 0.559364 | 4_2:-74901737 | Msa0622470:CDS |
| GCAAGAATCCGGTGGATCTG+TGG | 0.559609 | 4_2:-74904458 | Msa0622470:CDS |
| ATCAATGATTCTCGTTAGTG+AGG | 0.560283 | 4_2:-74904240 | Msa0622470:intron |
| CCAGACAAGACAATTGACTT+AGG | 0.562706 | 4_2:+74903361 | None:intergenic |
| AATATGTACCTCAGTGGCAG+TGG | 0.565729 | 4_2:-74901755 | Msa0622470:CDS |
| TCAACGATGTGTGGAGAGAA+GGG | 0.569143 | 4_2:+74901382 | None:intergenic |
| CAACGCTCTGTAGCCACTGT+CGG | 0.569412 | 4_2:-74901700 | Msa0622470:CDS |
| TAGGTACTTTCTACAGGACT+AGG | 0.570677 | 4_2:-74903132 | Msa0622470:CDS |
| GGTACATATTGTGTGCCCTA+TGG | 0.570961 | 4_2:+74901768 | None:intergenic |
| CTGTGGCGGTTGAATTTGCG+AGG | 0.571205 | 4_2:+74904669 | None:intergenic |
| GAATGATATAGAGAATGGTT+CGG | 0.572567 | 4_2:-74904324 | Msa0622470:CDS |
| AGCACTTGTATTAATCTAGA+GGG | 0.573165 | 4_2:+74901632 | None:intergenic |
| CAAAATAATGACAATAACAA+TGG | 0.573630 | 4_2:+74901422 | None:intergenic |
| AAGTAAGGTAGATCCGGTAG+TGG | 0.578706 | 4_2:+74904810 | None:intergenic |
| AGGTTTGAACGACGAAGCAG+AGG | 0.579424 | 4_2:+74904589 | None:intergenic |
| TACGGTCACCCCACTCAGCA+AGG | 0.586363 | 4_2:+74902022 | None:intergenic |
| AGATTAATACAAGTGCTGGT+TGG | 0.587086 | 4_2:-74901626 | Msa0622470:exon |
| GTTGTATCTACCTACTCCCT+AGG | 0.587735 | 4_2:-74901516 | Msa0622470:three_prime_UTR |
| ACATATTGTGTGCCCTATGG+TGG | 0.588291 | 4_2:+74901771 | None:intergenic |
| ACCTCAGTGGCAGTGGTGGG+AGG | 0.588861 | 4_2:-74901748 | Msa0622470:CDS |
| CAGCACTTGTATTAATCTAG+AGG | 0.589972 | 4_2:+74901631 | None:intergenic |
| ACCGAGATCCACAGATCCAC+CGG | 0.590630 | 4_2:+74904450 | None:intergenic |
| AAGTGCCTTGATTATAATGA+CGG | 0.591556 | 4_2:-74903332 | Msa0622470:intron |
| CTTCAAAGTTCAACGATGTG+TGG | 0.596681 | 4_2:+74901373 | None:intergenic |
| TTTAAATGATGACTTTGACT+AGG | 0.598691 | 4_2:-74901236 | Msa0622470:three_prime_UTR |
| CACTTGTATTAATCTAGAGG+GGG | 0.603175 | 4_2:+74901634 | None:intergenic |
| CCATAACCAGATCCCACTAC+CGG | 0.603818 | 4_2:-74904823 | Msa0622470:five_prime_UTR |
| TACTTTCTACAGGACTAGGA+AGG | 0.605041 | 4_2:-74903128 | Msa0622470:CDS |
| TTAACATTCCTTGCTGAGTG+GGG | 0.606715 | 4_2:-74902030 | Msa0622470:CDS |
| CGCTCTGTAGCCACTGTCGG+TGG | 0.611670 | 4_2:-74901697 | Msa0622470:CDS |
| ATTCCAAAATCCAAAAGGAA+GGG | 0.611762 | 4_2:+74901347 | None:intergenic |
| CGATGCAAGATCCCCAAACA+CGG | 0.622630 | 4_2:+74904914 | None:intergenic |
| AATGAAGCTGACCTGAGCGA+AGG | 0.623925 | 4_2:+74904569 | None:intergenic |
| AGTAGCAACAACCGTGTTTG+GGG | 0.623975 | 4_2:-74904925 | Msa0622470:five_prime_UTR |
| AGCACGTTGAAACTGTAATG+TGG | 0.629172 | 4_2:-74901322 | Msa0622470:three_prime_UTR |
| TGTACCTCAGTGGCAGTGGT+GGG | 0.630607 | 4_2:-74901751 | Msa0622470:CDS |
| ATCGAACTTTCCTAGGGAGT+AGG | 0.631723 | 4_2:+74901506 | None:intergenic |
| TCCTCCCACCACTGCCACTG+AGG | 0.633636 | 4_2:+74901747 | None:intergenic |
| GAAGAGAAGACCACCGACAG+TGG | 0.640727 | 4_2:+74901687 | None:intergenic |
| TGCAATCGGAGTAGCAGCTG+GGG | 0.642034 | 4_2:-74901794 | Msa0622470:CDS |
| AGTAAGGTAGATCCGGTAGT+GGG | 0.643825 | 4_2:+74904811 | None:intergenic |
| GCACTTGTATTAATCTAGAG+GGG | 0.643990 | 4_2:+74901633 | None:intergenic |
| GTGAATTGAAATGAAGGTGA+TGG | 0.649740 | 4_2:+74904879 | None:intergenic |
| AAGGGAAAACTTCATTTCGG+CGG | 0.657157 | 4_2:-74902178 | Msa0622470:CDS |
| TAGAGATGCTTACTTTGGCG+CGG | 0.657983 | 4_2:+74904425 | None:intergenic |
| TGTGGCGGTTGAATTTGCGA+GGG | 0.661732 | 4_2:+74904670 | None:intergenic |
| ACTTGTATTAATCTAGAGGG+GGG | 0.683100 | 4_2:+74901635 | None:intergenic |
| GACGACAGGCAAGAATCCGG+TGG | 0.690791 | 4_2:-74904466 | Msa0622470:CDS |
| GATGTTGAATCGTAGTGCCA+TGG | 0.692820 | 4_2:+74904641 | None:intergenic |
| GTGCCATGGTGAATCTGTGG+CGG | 0.700561 | 4_2:+74904655 | None:intergenic |
| CAACCGCCACAGATTCACCA+TGG | 0.703037 | 4_2:-74904658 | Msa0622470:exon |
| GTAGTGCCATGGTGAATCTG+TGG | 0.713130 | 4_2:+74904652 | None:intergenic |
| GCACACAATATGTACCTCAG+TGG | 0.739190 | 4_2:-74901761 | Msa0622470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAGTATTATAAATAAAATT+AGG | + | chr4_2:74902094-74902113 | None:intergenic | 10.0% |
| !! | TACAAATAATCAAATATTTA+GGG | + | chr4_2:74904325-74904344 | None:intergenic | 10.0% |
| !!! | AATATTTTACAAAAATGAAT+GGG | + | chr4_2:74904821-74904840 | None:intergenic | 10.0% |
| !!! | AAATATTTTACAAAAATGAA+TGG | + | chr4_2:74904822-74904841 | None:intergenic | 10.0% |
| !!! | TTTGTACAAACTTTTTATAA+TGG | + | chr4_2:74902535-74902554 | None:intergenic | 15.0% |
| !!! | ATACTAATTGTTATTTCAAT+TGG | - | chr4_2:74902660-74902679 | Msa0622470:intron | 15.0% |
| !!! | TACTAATTGTTATTTCAATT+GGG | - | chr4_2:74902661-74902680 | Msa0622470:intron | 15.0% |
| !! | GTACAAATAATCAAATATTT+AGG | + | chr4_2:74904326-74904345 | None:intergenic | 15.0% |
| !! | GTGAAAGAAAAAAAAAATTA+AGG | + | chr4_2:74904710-74904729 | None:intergenic | 15.0% |
| !! | AAGAAGAAAATTAGAAAGTA+AGG | + | chr4_2:74901483-74901502 | None:intergenic | 20.0% |
| !! | GAATATAAACAAACACATTA+CGG | + | chr4_2:74901770-74901789 | None:intergenic | 20.0% |
| !! | ATGTGTTTGTTTATATTCAT+AGG | - | chr4_2:74901772-74901791 | Msa0622470:CDS | 20.0% |
| !! | CAAATTATGCAATAAAATCA+AGG | + | chr4_2:74902145-74902164 | None:intergenic | 20.0% |
| !!! | TTTTAGTTGTAAACTATGAT+AGG | - | chr4_2:74902189-74902208 | Msa0622470:CDS | 20.0% |
| !! | CTAATAGTTAAATATCAGTT+AGG | + | chr4_2:74902461-74902480 | None:intergenic | 20.0% |
| !!! | ACTAATTGTTATTTCAATTG+GGG | - | chr4_2:74902662-74902681 | Msa0622470:intron | 20.0% |
| !!! | TAAAAAGCATTTATAGAAAG+AGG | + | chr4_2:74902705-74902724 | None:intergenic | 20.0% |
| !!! | TTTTAGAATTTTATGTGACT+AGG | - | chr4_2:74902720-74902739 | Msa0622470:CDS | 20.0% |
| !! | TACTATAATTAACATTGTTC+TGG | - | chr4_2:74903294-74903313 | Msa0622470:intron | 20.0% |
| !!! | CATTCATTATCTTGTTTTTA+TGG | - | chr4_2:74903437-74903456 | Msa0622470:intron | 20.0% |
| !!! | TTTTTTTTTCTTTCACTTGA+TGG | - | chr4_2:74904714-74904733 | Msa0622470:five_prime_UTR | 20.0% |
| !! | CAAAATCTTATATTCCAATT+AGG | + | chr4_2:74904795-74904814 | None:intergenic | 20.0% |
| !! | CAAAATAATGACAATAACAA+TGG | + | chr4_2:74904856-74904875 | None:intergenic | 20.0% |
| !!! | CATTGTTATTGTCATTATTT+TGG | - | chr4_2:74904854-74904873 | Msa0622470:five_prime_UTR | 20.0% |
| !!! | TTATTGTCATTATTTTGGAA+GGG | - | chr4_2:74904859-74904878 | Msa0622470:five_prime_UTR | 20.0% |
| ! | TTTATATTCATAGGATTCTC+TGG | - | chr4_2:74901781-74901800 | Msa0622470:CDS | 25.0% |
| ! | ATTCAAATGAACAAAAAGAG+AGG | + | chr4_2:74901877-74901896 | None:intergenic | 25.0% |
| ! | ATTTGAATTGTTCATTCAAC+TGG | - | chr4_2:74901889-74901908 | Msa0622470:intron | 25.0% |
| ! | ACAACTAAAAAATTCTTCAC+TGG | + | chr4_2:74902179-74902198 | None:intergenic | 25.0% |
| ! | TGAATTGAATTTGTAGTGTT+TGG | - | chr4_2:74902403-74902422 | Msa0622470:intron | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAT+CGG | - | chr4_2:74902415-74902434 | Msa0622470:intron | 25.0% |
| ! | ATTTATTATAGCAGCTCTTA+TGG | - | chr4_2:74902880-74902899 | Msa0622470:intron | 25.0% |
| !! | TAATATAGAGCACTATTTCT+TGG | - | chr4_2:74903063-74903082 | Msa0622470:intron | 25.0% |
| !!! | TGCTTCTTTGAAATCAAATT+TGG | + | chr4_2:74903179-74903198 | None:intergenic | 25.0% |
| ! | CAAGATAATGAATGAAGATT+TGG | + | chr4_2:74903431-74903450 | None:intergenic | 25.0% |
| ! | AGACAAAGCTATAGTATAAA+TGG | + | chr4_2:74903679-74903698 | None:intergenic | 25.0% |
| ! | TATAGCATGTTTACAATTAC+AGG | + | chr4_2:74903954-74903973 | None:intergenic | 25.0% |
| ! | TTAAAGAAAAGAGTCAAACT+TGG | - | chr4_2:74904018-74904037 | Msa0622470:intron | 25.0% |
| !! | AGAATTTGTTCTTGTTAACT+AGG | - | chr4_2:74904050-74904069 | Msa0622470:intron | 25.0% |
| !! | GTCATTACCTCTAAAAATAT+GGG | + | chr4_2:74904144-74904163 | None:intergenic | 25.0% |
| !! | TGTCATTACCTCTAAAAATA+TGG | + | chr4_2:74904145-74904164 | None:intergenic | 25.0% |
| !! | TTGTCTTTGTTGTAGAATTT+GGG | - | chr4_2:74904737-74904756 | Msa0622470:five_prime_UTR | 25.0% |
| !!! | GTTATTGTCATTATTTTGGA+AGG | - | chr4_2:74904858-74904877 | Msa0622470:five_prime_UTR | 25.0% |
| !! | TAGTCATGCATATCTTTTAA+AGG | - | chr4_2:74904990-74905009 | Msa0622470:five_prime_UTR | 25.0% |
| ! | ATCATTTAAATCGTGTTTGT+TGG | + | chr4_2:74905029-74905048 | None:intergenic | 25.0% |
| ! | TTTAAATGATGACTTTGACT+AGG | - | chr4_2:74905039-74905058 | Msa0622470:five_prime_UTR | 25.0% |
| !!! | ATCTGGTTATGGTTTTGATA+CGG | + | chr4_2:74901444-74901463 | None:intergenic | 30.0% |
| ATTAGAAAGTAAGGTAGATC+CGG | + | chr4_2:74901474-74901493 | None:intergenic | 30.0% | |
| TATAAACAAACACATTACGG+CGG | + | chr4_2:74901767-74901786 | None:intergenic | 30.0% | |
| GAATGATATAGAGAATGGTT+CGG | - | chr4_2:74901951-74901970 | Msa0622470:intron | 30.0% | |
| TTTATGGAAAGAAAACGACT+AGG | - | chr4_2:74902290-74902309 | Msa0622470:intron | 30.0% | |
| AAGTTCTTATGAGCTTGTAA+AGG | - | chr4_2:74902557-74902576 | Msa0622470:intron | 30.0% | |
| TCTATTCTATGTTTGCGTTA+TGG | - | chr4_2:74902813-74902832 | Msa0622470:intron | 30.0% | |
| !!! | AACCTTTTTTCATGCTAGAT+TGG | - | chr4_2:74902848-74902867 | Msa0622470:intron | 30.0% |
| !!! | ACCTTTTTTCATGCTAGATT+GGG | - | chr4_2:74902849-74902868 | Msa0622470:intron | 30.0% |
| AAGTGCCTTGATTATAATGA+CGG | - | chr4_2:74902943-74902962 | Msa0622470:intron | 30.0% | |
| ACTTACCGTCATTATAATCA+AGG | + | chr4_2:74902951-74902970 | None:intergenic | 30.0% | |
| ATTAATGAGAACAGAAAAGC+AGG | + | chr4_2:74903002-74903021 | None:intergenic | 30.0% | |
| ! | TGCTTTTCTGTTCTCATTAA+TGG | - | chr4_2:74903001-74903020 | Msa0622470:intron | 30.0% |
| !!! | TTTTTTACATTGTGCTGTGA+TGG | - | chr4_2:74903028-74903047 | Msa0622470:intron | 30.0% |
| GTTATTTGTTTGTGTCCATT+AGG | - | chr4_2:74903124-74903143 | Msa0622470:CDS | 30.0% | |
| ! | AAAAGTACATGGAGTTAAAC+AGG | + | chr4_2:74903324-74903343 | None:intergenic | 30.0% |
| ! | AAACGTGTAACAAAAGTACA+TGG | + | chr4_2:74903335-74903354 | None:intergenic | 30.0% |
| GCGTATGACAAAAAAATGAT+AGG | + | chr4_2:74903515-74903534 | None:intergenic | 30.0% | |
| ! | GCAGTTCTTTATCTTTTCTT+CGG | - | chr4_2:74903533-74903552 | Msa0622470:intron | 30.0% |
| ! | CAGTTCTTTATCTTTTCTTC+GGG | - | chr4_2:74903534-74903553 | Msa0622470:intron | 30.0% |
| ! | TCTTTCTTCTGTGAAGATTT+TGG | + | chr4_2:74903593-74903612 | None:intergenic | 30.0% |
| ATCTTCACAGAAGAAAGAAA+TGG | - | chr4_2:74903595-74903614 | Msa0622470:intron | 30.0% | |
| ! | ATCTAGAATAAAGGAACTTG+AGG | + | chr4_2:74903729-74903748 | None:intergenic | 30.0% |
| TCAAGTTCCTTTATTCTAGA+TGG | - | chr4_2:74903728-74903747 | Msa0622470:intron | 30.0% | |
| ! | AAATGTGCCATCTAGAATAA+AGG | + | chr4_2:74903738-74903757 | None:intergenic | 30.0% |
| TAATATAGATGCAACTCTTC+AGG | - | chr4_2:74903851-74903870 | Msa0622470:intron | 30.0% | |
| !! | ATTGTTGATGACACATTAGT+TGG | - | chr4_2:74903989-74904008 | Msa0622470:intron | 30.0% |
| ! | TAGGTTGAAGAAAAACTTGA+AGG | - | chr4_2:74904069-74904088 | Msa0622470:intron | 30.0% |
| !!! | TTGTACACCCATATTTTTAG+AGG | - | chr4_2:74904134-74904153 | Msa0622470:intron | 30.0% |
| TAACCACCGACAAAAATTAA+AGG | + | chr4_2:74904384-74904403 | None:intergenic | 30.0% | |
| GCAACACATAAAAATGCAAT+CGG | - | chr4_2:74904467-74904486 | Msa0622470:CDS | 30.0% | |
| AGCACTTGTATTAATCTAGA+GGG | + | chr4_2:74904646-74904665 | None:intergenic | 30.0% | |
| ! | GTTGTCTTTGTTGTAGAATT+TGG | - | chr4_2:74904736-74904755 | Msa0622470:five_prime_UTR | 30.0% |
| ATTCCAAAATCCAAAAGGAA+GGG | + | chr4_2:74904931-74904950 | None:intergenic | 30.0% | |
| AATTCCAAAATCCAAAAGGA+AGG | + | chr4_2:74904932-74904951 | None:intergenic | 30.0% | |
| GCTAAATTCCAAAATCCAAA+AGG | + | chr4_2:74904936-74904955 | None:intergenic | 30.0% | |
| TGCATGACTATCTATTGAAA+TGG | + | chr4_2:74904980-74904999 | None:intergenic | 30.0% | |
| !! | TCATGCATATCTTTTAAAGG+TGG | - | chr4_2:74904993-74905012 | Msa0622470:five_prime_UTR | 30.0% |
| GTGAATTGAAATGAAGGTGA+TGG | + | chr4_2:74901399-74901418 | None:intergenic | 35.0% | |
| GATTGCGTGAATTGAAATGA+AGG | + | chr4_2:74901405-74901424 | None:intergenic | 35.0% | |
| ATAAACAAACACATTACGGC+GGG | + | chr4_2:74901766-74901785 | None:intergenic | 35.0% | |
| GCGTTGAATGATATAGAGAA+TGG | - | chr4_2:74901946-74901965 | Msa0622470:intron | 35.0% | |
| ATCAATGATTCTCGTTAGTG+AGG | - | chr4_2:74902035-74902054 | Msa0622470:CDS | 35.0% | |
| AGCATGACGAATTTAGTTAG+AGG | - | chr4_2:74902212-74902231 | Msa0622470:intron | 35.0% | |
| TAGTTAGAGGAAGCTCAAAT+TGG | - | chr4_2:74902225-74902244 | Msa0622470:intron | 35.0% | |
| !! | ACGACTAGGTGTTATTGTTA+AGG | - | chr4_2:74902304-74902323 | Msa0622470:intron | 35.0% |
| !! | CGACTAGGTGTTATTGTTAA+GGG | - | chr4_2:74902305-74902324 | Msa0622470:intron | 35.0% |
| !! | GTGTTATTGTTAAGGGTGTT+TGG | - | chr4_2:74902312-74902331 | Msa0622470:intron | 35.0% |
| !!! | CCTTTTTTCATGCTAGATTG+GGG | - | chr4_2:74902850-74902869 | Msa0622470:intron | 35.0% |
| ! | ATCTCGATGTTGTTGATAGA+AGG | + | chr4_2:74903100-74903119 | None:intergenic | 35.0% |
| TGTGCATTCTGGATTCATAA+TGG | - | chr4_2:74903239-74903258 | Msa0622470:intron | 35.0% | |
| ATTATAGTAGCTTTCGTCAC+AGG | + | chr4_2:74903283-74903302 | None:intergenic | 35.0% | |
| AAATGGAGAGAATTGAACTG+TGG | + | chr4_2:74903662-74903681 | None:intergenic | 35.0% | |
| !! | CTATAGCTTTGTCTTTGTAC+AGG | - | chr4_2:74903685-74903704 | Msa0622470:intron | 35.0% |
| AACAGTTACTGTATTTGTGC+TGG | - | chr4_2:74903762-74903781 | Msa0622470:intron | 35.0% | |
| ACATATTTAAACAGCCATCG+AGG | + | chr4_2:74903816-74903835 | None:intergenic | 35.0% | |
| TAAACATGCTATAGCATGCA+GGG | - | chr4_2:74903961-74903980 | Msa0622470:intron | 35.0% | |
| GTTGAAGAAAAACTTGAAGG+TGG | - | chr4_2:74904072-74904091 | Msa0622470:intron | 35.0% | |
| AAAAACTTGAAGGTGGACAA+GGG | - | chr4_2:74904079-74904098 | Msa0622470:intron | 35.0% | |
| GACAAGGGAAAACTTCATTT+CGG | - | chr4_2:74904094-74904113 | Msa0622470:intron | 35.0% | |
| ! | TTTTAACATTCCTTGCTGAG+TGG | - | chr4_2:74904243-74904262 | Msa0622470:CDS | 35.0% |
| TTTAACATTCCTTGCTGAGT+GGG | - | chr4_2:74904244-74904263 | Msa0622470:CDS | 35.0% | |
| CTGGAGACATAAAATCGATA+AGG | + | chr4_2:74904361-74904380 | None:intergenic | 35.0% | |
| !! | CTCCAGCCTTTAATTTTTGT+CGG | - | chr4_2:74904375-74904394 | Msa0622470:intron | 35.0% |
| ATGAAGACAAAGAAAAGCCT+AGG | + | chr4_2:74904613-74904632 | None:intergenic | 35.0% | |
| ACTTGTATTAATCTAGAGGG+GGG | + | chr4_2:74904643-74904662 | None:intergenic | 35.0% | |
| CACTTGTATTAATCTAGAGG+GGG | + | chr4_2:74904644-74904663 | None:intergenic | 35.0% | |
| GCACTTGTATTAATCTAGAG+GGG | + | chr4_2:74904645-74904664 | None:intergenic | 35.0% | |
| CAGCACTTGTATTAATCTAG+AGG | + | chr4_2:74904647-74904666 | None:intergenic | 35.0% | |
| CTCTAGATTAATACAAGTGC+TGG | - | chr4_2:74904645-74904664 | Msa0622470:exon | 35.0% | |
| !! | AGATTAATACAAGTGCTGGT+TGG | - | chr4_2:74904649-74904668 | Msa0622470:exon | 35.0% |
| ATTAGGATCGAACTTTCCTA+GGG | + | chr4_2:74904778-74904797 | None:intergenic | 35.0% | |
| AATTAGGATCGAACTTTCCT+AGG | + | chr4_2:74904779-74904798 | None:intergenic | 35.0% | |
| TAGGAAAGTTCGATCCTAAT+TGG | - | chr4_2:74904778-74904797 | Msa0622470:five_prime_UTR | 35.0% | |
| !! | GCATATCTTTTAAAGGTGGA+CGG | - | chr4_2:74904997-74905016 | Msa0622470:five_prime_UTR | 35.0% |
| AAAGTAGCAACAACCGTGTT+TGG | - | chr4_2:74901348-74901367 | Msa0622470:three_prime_UTR | 40.0% | |
| AAGTAGCAACAACCGTGTTT+GGG | - | chr4_2:74901349-74901368 | Msa0622470:three_prime_UTR | 40.0% | |
| GCACTACGATTCAACATCAA+TGG | - | chr4_2:74901639-74901658 | Msa0622470:exon | 40.0% | |
| TGAAAACGCGTAGAATGGAA+GGG | + | chr4_2:74901733-74901752 | None:intergenic | 40.0% | |
| ATGAAAACGCGTAGAATGGA+AGG | + | chr4_2:74901734-74901753 | None:intergenic | 40.0% | |
| ATGCATGAAAACGCGTAGAA+TGG | + | chr4_2:74901738-74901757 | None:intergenic | 40.0% | |
| TAAACAAACACATTACGGCG+GGG | + | chr4_2:74901765-74901784 | None:intergenic | 40.0% | |
| GAGGTTAGAGATGCTTACTT+TGG | + | chr4_2:74901858-74901877 | None:intergenic | 40.0% | |
| ! | TGCGAGTGATTTTTGTGAAC+AGG | - | chr4_2:74901921-74901940 | Msa0622470:intron | 40.0% |
| TTCGGTCATTTCTCTTAGCT+TGG | - | chr4_2:74901969-74901988 | Msa0622470:intron | 40.0% | |
| ! | TCTCTTAGCTTGGATTCTTC+TGG | - | chr4_2:74901979-74901998 | Msa0622470:intron | 40.0% |
| ! | ATCAGTGAAAGTGTGCGATA+CGG | - | chr4_2:74902252-74902271 | Msa0622470:intron | 40.0% |
| GAGTCAATGTGACGCATTTA+TGG | - | chr4_2:74902274-74902293 | Msa0622470:intron | 40.0% | |
| GGGTGTTTGGTAAAAAGTAG+TGG | - | chr4_2:74902325-74902344 | Msa0622470:intron | 40.0% | |
| CCCCAATCTAGCATGAAAAA+AGG | + | chr4_2:74902853-74902872 | None:intergenic | 40.0% | |
| ! | CCAGACAAGACAATTGACTT+AGG | + | chr4_2:74902917-74902936 | None:intergenic | 40.0% |
| CCTAAGTCAATTGTCTTGTC+TGG | - | chr4_2:74902914-74902933 | Msa0622470:intron | 40.0% | |
| GTCCATTAGGTACTTTCTAC+AGG | - | chr4_2:74903137-74903156 | Msa0622470:intron | 40.0% | |
| !! | GTCCTGTAGAAAGTACCTAA+TGG | + | chr4_2:74903142-74903161 | None:intergenic | 40.0% |
| TAGGTACTTTCTACAGGACT+AGG | - | chr4_2:74903143-74903162 | Msa0622470:intron | 40.0% | |
| TACTTTCTACAGGACTAGGA+AGG | - | chr4_2:74903147-74903166 | Msa0622470:intron | 40.0% | |
| ! | CATACAAATAGTGCTGCTAC+AGG | - | chr4_2:74903197-74903216 | Msa0622470:intron | 40.0% |
| GCTGCTACAGGTAAACTTAT+CGG | - | chr4_2:74903209-74903228 | Msa0622470:intron | 40.0% | |
| ATAATGGCTGAGTATGCACT+CGG | - | chr4_2:74903255-74903274 | Msa0622470:intron | 40.0% | |
| TTCTATCTATGCCTTGCTTC+TGG | - | chr4_2:74903382-74903401 | Msa0622470:CDS | 40.0% | |
| TTAATTGAGCTCTGCTCTCA+TGG | + | chr4_2:74903928-74903947 | None:intergenic | 40.0% | |
| GTAAACATGCTATAGCATGC+AGG | - | chr4_2:74903960-74903979 | Msa0622470:intron | 40.0% | |
| GAAAAACTTGAAGGTGGACA+AGG | - | chr4_2:74904078-74904097 | Msa0622470:intron | 40.0% | |
| AAGGGAAAACTTCATTTCGG+CGG | - | chr4_2:74904097-74904116 | Msa0622470:intron | 40.0% | |
| TTAACATTCCTTGCTGAGTG+GGG | - | chr4_2:74904245-74904264 | Msa0622470:CDS | 40.0% | |
| TTACTGCAATTGTCGCAATC+TGG | + | chr4_2:74904280-74904299 | None:intergenic | 40.0% | |
| !! | TAGGGTGTTGAGTTAAGAGA+TGG | + | chr4_2:74904307-74904326 | None:intergenic | 40.0% |
| CACCGACAAAAATTAAAGGC+TGG | + | chr4_2:74904380-74904399 | None:intergenic | 40.0% | |
| !! | CAGCCTTTAATTTTTGTCGG+TGG | - | chr4_2:74904378-74904397 | Msa0622470:intron | 40.0% |
| CTTCAAAGTTCAACGATGTG+TGG | + | chr4_2:74904905-74904924 | None:intergenic | 40.0% | |
| ! | TTTGAAGACTCCCTTCCTTT+TGG | - | chr4_2:74904918-74904937 | Msa0622470:five_prime_UTR | 40.0% |
| ! | ACTCCCTTCCTTTTGGATTT+TGG | - | chr4_2:74904925-74904944 | Msa0622470:five_prime_UTR | 40.0% |
| AGCACGTTGAAACTGTAATG+TGG | - | chr4_2:74904953-74904972 | Msa0622470:five_prime_UTR | 40.0% | |
| AGTAGCAACAACCGTGTTTG+GGG | - | chr4_2:74901350-74901369 | Msa0622470:three_prime_UTR | 45.0% | |
| AGTAAGGTAGATCCGGTAGT+GGG | + | chr4_2:74901467-74901486 | None:intergenic | 45.0% | |
| AAGTAAGGTAGATCCGGTAG+TGG | + | chr4_2:74901468-74901487 | None:intergenic | 45.0% | |
| GATGTTGAATCGTAGTGCCA+TGG | + | chr4_2:74901637-74901656 | None:intergenic | 45.0% | |
| GCAGAGGAGAAGAACGAAAA+CGG | + | chr4_2:74901673-74901692 | None:intergenic | 45.0% | |
| TAGAGATGCTTACTTTGGCG+CGG | + | chr4_2:74901853-74901872 | None:intergenic | 45.0% | |
| AGCTTGGATTCTTCTGGTGT+TGG | - | chr4_2:74901985-74902004 | Msa0622470:intron | 45.0% | |
| !!! | GTGCTGTGATGGACTGATTT+TGG | - | chr4_2:74903039-74903058 | Msa0622470:intron | 45.0% |
| ATCAGTGAACTCCAGAAGCA+AGG | + | chr4_2:74903396-74903415 | None:intergenic | 45.0% | |
| TACGACTGCTGTACATTGCT+TGG | - | chr4_2:74903558-74903577 | Msa0622470:intron | 45.0% | |
| ! | ATACTGACTAGTGACCTCGA+TGG | - | chr4_2:74903799-74903818 | Msa0622470:intron | 45.0% |
| AGTTTCCTTGTTACTCCACC+TGG | - | chr4_2:74903895-74903914 | Msa0622470:intron | 45.0% | |
| CAATTGTCGCAATCTGGCTA+CGG | + | chr4_2:74904274-74904293 | None:intergenic | 45.0% | |
| CAGCTGCACAAGGAAATTGA+AGG | + | chr4_2:74904447-74904466 | None:intergenic | 45.0% | |
| CTTCAATTTCCTTGTGCAGC+TGG | - | chr4_2:74904445-74904464 | Msa0622470:CDS | 45.0% | |
| ACATATTGTGTGCCCTATGG+TGG | + | chr4_2:74904507-74904526 | None:intergenic | 45.0% | |
| GGTACATATTGTGTGCCCTA+TGG | + | chr4_2:74904510-74904529 | None:intergenic | 45.0% | |
| GCACACAATATGTACCTCAG+TGG | - | chr4_2:74904514-74904533 | Msa0622470:intron | 45.0% | |
| AATATGTACCTCAGTGGCAG+TGG | - | chr4_2:74904520-74904539 | Msa0622470:intron | 45.0% | |
| GTTGTATCTACCTACTCCCT+AGG | - | chr4_2:74904759-74904778 | Msa0622470:five_prime_UTR | 45.0% | |
| ATCGAACTTTCCTAGGGAGT+AGG | + | chr4_2:74904772-74904791 | None:intergenic | 45.0% | |
| TCAACGATGTGTGGAGAGAA+GGG | + | chr4_2:74904896-74904915 | None:intergenic | 45.0% | |
| TTCAACGATGTGTGGAGAGA+AGG | + | chr4_2:74904897-74904916 | None:intergenic | 45.0% | |
| CGATGCAAGATCCCCAAACA+CGG | + | chr4_2:74901364-74901383 | None:intergenic | 50.0% | |
| GTTTGGGGATCTTGCATCGA+AGG | - | chr4_2:74901365-74901384 | Msa0622470:three_prime_UTR | 50.0% | |
| CCATAACCAGATCCCACTAC+CGG | - | chr4_2:74901452-74901471 | Msa0622470:three_prime_UTR | 50.0% | |
| TGTGGCGGTTGAATTTGCGA+GGG | + | chr4_2:74901608-74901627 | None:intergenic | 50.0% | |
| GTAGTGCCATGGTGAATCTG+TGG | + | chr4_2:74901626-74901645 | None:intergenic | 50.0% | |
| AGGTTTGAACGACGAAGCAG+AGG | + | chr4_2:74901689-74901708 | None:intergenic | 50.0% | |
| AATGAAGCTGACCTGAGCGA+AGG | + | chr4_2:74901709-74901728 | None:intergenic | 50.0% | |
| TCGGCGATACTTGTGCATTC+TGG | - | chr4_2:74903228-74903247 | Msa0622470:intron | 50.0% | |
| AGTGACCAGGTGGAGTAACA+AGG | + | chr4_2:74903903-74903922 | None:intergenic | 50.0% | |
| TATGTGTTGCCAGCTGCACA+AGG | + | chr4_2:74904457-74904476 | None:intergenic | 50.0% | |
| AATGCAATCGGAGTAGCAGC+TGG | - | chr4_2:74904479-74904498 | Msa0622470:CDS | 50.0% | |
| ATGCAATCGGAGTAGCAGCT+GGG | - | chr4_2:74904480-74904499 | Msa0622470:CDS | 50.0% | |
| !! | CCGGTAGTGGGATCTGGTTA+TGG | + | chr4_2:74901455-74901474 | None:intergenic | 55.0% |
| !! | GTAGATCCGGTAGTGGGATC+TGG | + | chr4_2:74901461-74901480 | None:intergenic | 55.0% |
| CTGTGGCGGTTGAATTTGCG+AGG | + | chr4_2:74901609-74901628 | None:intergenic | 55.0% | |
| CAACCGCCACAGATTCACCA+TGG | - | chr4_2:74901617-74901636 | Msa0622470:three_prime_UTR | 55.0% | |
| GTGCCATGGTGAATCTGTGG+CGG | + | chr4_2:74901623-74901642 | None:intergenic | 55.0% | |
| CGTCGTTCAAACCTTCGCTC+AGG | - | chr4_2:74901695-74901714 | Msa0622470:CDS | 55.0% | |
| ! | ATTCTCTGGCTCACGACGAC+AGG | - | chr4_2:74901795-74901814 | Msa0622470:CDS | 55.0% |
| CACGACGACAGGCAAGAATC+CGG | - | chr4_2:74901806-74901825 | Msa0622470:CDS | 55.0% | |
| GCAAGAATCCGGTGGATCTG+TGG | - | chr4_2:74901817-74901836 | Msa0622470:intron | 55.0% | |
| TCCGGTGGATCTGTGGATCT+CGG | - | chr4_2:74901824-74901843 | Msa0622470:intron | 55.0% | |
| ACCGAGATCCACAGATCCAC+CGG | + | chr4_2:74901828-74901847 | None:intergenic | 55.0% | |
| TCTCATGGCAAGTGACCAGG+TGG | + | chr4_2:74903913-74903932 | None:intergenic | 55.0% | |
| TGCTCTCATGGCAAGTGACC+AGG | + | chr4_2:74903916-74903935 | None:intergenic | 55.0% | |
| TGCAATCGGAGTAGCAGCTG+GGG | - | chr4_2:74904481-74904500 | Msa0622470:CDS | 55.0% | |
| ATGTACCTCAGTGGCAGTGG+TGG | - | chr4_2:74904523-74904542 | Msa0622470:intron | 55.0% | |
| TGTACCTCAGTGGCAGTGGT+GGG | - | chr4_2:74904524-74904543 | Msa0622470:intron | 55.0% | |
| ! | GAGGAAGCATGCTGGCATCT+AGG | - | chr4_2:74904546-74904565 | Msa0622470:intron | 55.0% |
| ! | GACAGTGGCTACAGAGCGTT+GGG | + | chr4_2:74904576-74904595 | None:intergenic | 55.0% |
| CAACGCTCTGTAGCCACTGT+CGG | - | chr4_2:74904575-74904594 | Msa0622470:intron | 55.0% | |
| GAAGAGAAGACCACCGACAG+TGG | + | chr4_2:74904591-74904610 | None:intergenic | 55.0% | |
| GTCGGTGGTCTTCTCTTCCT+AGG | - | chr4_2:74904593-74904612 | Msa0622470:CDS | 55.0% | |
| GACGACAGGCAAGAATCCGG+TGG | - | chr4_2:74901809-74901828 | Msa0622470:CDS | 60.0% | |
| TACGGTCACCCCACTCAGCA+AGG | + | chr4_2:74904256-74904275 | None:intergenic | 60.0% | |
| TAGCAGCTGGGGCCACCATA+GGG | - | chr4_2:74904492-74904511 | Msa0622470:intron | 60.0% | |
| ! | AGTGGTGGGAGGAAGCATGC+TGG | - | chr4_2:74904538-74904557 | Msa0622470:intron | 60.0% |
| CGACAGTGGCTACAGAGCGT+TGG | + | chr4_2:74904577-74904596 | None:intergenic | 60.0% | |
| GTAGCAGCTGGGGCCACCAT+AGG | - | chr4_2:74904491-74904510 | Msa0622470:intron | 65.0% | |
| ! | ACCTCAGTGGCAGTGGTGGG+AGG | - | chr4_2:74904527-74904546 | Msa0622470:intron | 65.0% |
| TCCTCCCACCACTGCCACTG+AGG | + | chr4_2:74904531-74904550 | None:intergenic | 65.0% | |
| CGCTCTGTAGCCACTGTCGG+TGG | - | chr4_2:74904578-74904597 | Msa0622470:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 74901210 | 74905087 | 74901210 | ID=Msa0622470;Name=Msa0622470 |
| chr4_2 | mRNA | 74901210 | 74905087 | 74901210 | ID=Msa0622470-mRNA-1;Parent=Msa0622470;Name=Msa0622470-mRNA-1;_AED=0.06;_eAED=0.06;_QI=426|1|1|1|1|1|9|432|284 |
| chr4_2 | exon | 74901210 | 74901833 | 74901210 | ID=Msa0622470-mRNA-1:exon:22720;Parent=Msa0622470-mRNA-1 |
| chr4_2 | exon | 74902002 | 74902061 | 74902002 | ID=Msa0622470-mRNA-1:exon:22719;Parent=Msa0622470-mRNA-1 |
| chr4_2 | exon | 74902142 | 74902225 | 74902142 | ID=Msa0622470-mRNA-1:exon:22718;Parent=Msa0622470-mRNA-1 |
| chr4_2 | exon | 74902675 | 74902760 | 74902675 | ID=Msa0622470-mRNA-1:exon:22717;Parent=Msa0622470-mRNA-1 |
| chr4_2 | exon | 74903079 | 74903151 | 74903079 | ID=Msa0622470-mRNA-1:exon:22716;Parent=Msa0622470-mRNA-1 |
| chr4_2 | exon | 74903333 | 74903431 | 74903333 | ID=Msa0622470-mRNA-1:exon:22715;Parent=Msa0622470-mRNA-1 |
| chr4_2 | exon | 74904241 | 74904354 | 74904241 | ID=Msa0622470-mRNA-1:exon:22714;Parent=Msa0622470-mRNA-1 |
| chr4_2 | exon | 74904438 | 74904503 | 74904438 | ID=Msa0622470-mRNA-1:exon:22713;Parent=Msa0622470-mRNA-1 |
| chr4_2 | exon | 74904581 | 74905087 | 74904581 | ID=Msa0622470-mRNA-1:exon:22712;Parent=Msa0622470-mRNA-1 |
| chr4_2 | five_prime_UTR | 74904662 | 74905087 | 74904662 | ID=Msa0622470-mRNA-1:five_prime_utr;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74904581 | 74904661 | 74904581 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74904438 | 74904503 | 74904438 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74904241 | 74904354 | 74904241 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74903333 | 74903431 | 74903333 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74903079 | 74903151 | 74903079 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74902675 | 74902760 | 74902675 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74902142 | 74902225 | 74902142 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74902002 | 74902061 | 74902002 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | CDS | 74901642 | 74901833 | 74901642 | ID=Msa0622470-mRNA-1:cds;Parent=Msa0622470-mRNA-1 |
| chr4_2 | three_prime_UTR | 74901210 | 74901641 | 74901210 | ID=Msa0622470-mRNA-1:three_prime_utr;Parent=Msa0622470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
