Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1450520 | sp|Q9SU40|SKU5_ARATH | 79.359 | 562 | 115 | 1 | 6 | 566 | 3 | 564 | 0.0 | 946 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1450520 | G7JK45 | 98.475 | 590 | 9 | 0 | 1 | 590 | 1 | 590 | 0.0 | 1202 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0030130 | Msa1450520 | 0.826735 | 2.304175e-54 | -8.615850e-47 |
Msa0109890 | Msa1450520 | 0.840177 | 1.017097e-57 | -8.615850e-47 |
Msa0118270 | Msa1450520 | 0.801922 | 7.164651e-49 | -8.615850e-47 |
Msa1366330 | Msa1450520 | 0.831223 | 1.885740e-55 | -8.615850e-47 |
Msa1404680 | Msa1450520 | 0.840355 | 9.140619e-58 | -8.615850e-47 |
Msa1427110 | Msa1450520 | 0.814738 | 1.322417e-51 | -8.615850e-47 |
Msa1450520 | Msa1455400 | 0.830146 | 3.461255e-55 | -8.615850e-47 |
Msa0617940 | Msa1450520 | 0.800316 | 1.526328e-48 | -8.615850e-47 |
Msa0692790 | Msa1450520 | 0.801886 | 7.286140e-49 | -8.615850e-47 |
Msa0706760 | Msa1450520 | 0.804288 | 2.321369e-49 | -8.615850e-47 |
Msa0716890 | Msa1450520 | 0.802329 | 5.906379e-49 | -8.615850e-47 |
Msa0828840 | Msa1450520 | 0.817485 | 3.218946e-52 | -8.615850e-47 |
Msa0156240 | Msa1450520 | 0.805952 | 1.041323e-49 | -8.615850e-47 |
Msa0161400 | Msa1450520 | 0.805082 | 1.584788e-49 | -8.615850e-47 |
Msa0170130 | Msa1450520 | 0.824815 | 6.580427e-54 | -8.615850e-47 |
Msa1257720 | Msa1450520 | 0.998058 | 3.742018e-255 | -8.615850e-47 |
Msa1257780 | Msa1450520 | 0.948677 | 5.865493e-107 | -8.615850e-47 |
Msa1329160 | Msa1450520 | 0.957961 | 7.623326e-116 | -8.615850e-47 |
Msa0400420 | Msa1450520 | 0.833331 | 5.670779e-56 | -8.615850e-47 |
Msa1028870 | Msa1450520 | 0.819883 | 9.193499e-53 | -8.615850e-47 |
Msa1031010 | Msa1450520 | 0.853211 | 2.775149e-61 | -8.615850e-47 |
Msa1031020 | Msa1450520 | 0.844457 | 7.471894e-59 | -8.615850e-47 |
Msa1035060 | Msa1450520 | 0.810822 | 9.521292e-51 | -8.615850e-47 |
Msa1067990 | Msa1450520 | 0.804060 | 2.589366e-49 | -8.615850e-47 |
Msa1070150 | Msa1450520 | 0.855814 | 4.901816e-62 | -8.615850e-47 |
Msa1080760 | Msa1450520 | 0.825991 | 3.465747e-54 | -8.615850e-47 |
Msa0241610 | Msa1450520 | 0.801088 | 1.061808e-48 | -8.615850e-47 |
Msa0287640 | Msa1450520 | 0.803240 | 3.831058e-49 | -8.615850e-47 |
Msa0317870 | Msa1450520 | 0.810349 | 1.204546e-50 | -8.615850e-47 |
Msa0327670 | Msa1450520 | 0.817772 | 2.773151e-52 | -8.615850e-47 |
Msa1157980 | Msa1450520 | 0.834442 | 2.990157e-56 | -8.615850e-47 |
Msa1207840 | Msa1450520 | 0.996053 | 7.470798e-223 | -8.615850e-47 |
Msa0519760 | Msa1450520 | 0.814196 | 1.742411e-51 | -8.615850e-47 |
Msa0519810 | Msa1450520 | 0.820467 | 6.754986e-53 | -8.615850e-47 |
Msa0519840 | Msa1450520 | 0.821233 | 4.502853e-53 | -8.615850e-47 |
Msa0590630 | Msa1450520 | 0.800370 | 1.488064e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1450520 | MtrunA17_Chr4g0056511 | 98.475 | 590 | 9 | 0 | 1 | 590 | 1 | 590 | 0.0 | 1202 |
Msa1450520 | MtrunA17_Chr3g0079321 | 66.954 | 581 | 192 | 0 | 6 | 586 | 8 | 588 | 0.0 | 815 |
Msa1450520 | MtrunA17_Chr7g0234061 | 67.135 | 569 | 181 | 4 | 24 | 589 | 26 | 591 | 0.0 | 775 |
Msa1450520 | MtrunA17_Chr3g0143671 | 52.514 | 537 | 234 | 7 | 16 | 551 | 19 | 535 | 0.0 | 552 |
Msa1450520 | MtrunA17_Chr4g0024861 | 51.776 | 535 | 237 | 6 | 18 | 551 | 18 | 532 | 0.0 | 544 |
Msa1450520 | MtrunA17_Chr1g0157341 | 51.273 | 550 | 244 | 7 | 6 | 551 | 5 | 534 | 0.0 | 535 |
Msa1450520 | MtrunA17_Chr8g0374261 | 48.746 | 558 | 257 | 9 | 4 | 557 | 7 | 539 | 0.0 | 524 |
Msa1450520 | MtrunA17_Chr2g0322441 | 51.963 | 535 | 236 | 6 | 18 | 551 | 21 | 535 | 0.0 | 523 |
Msa1450520 | MtrunA17_Chr5g0402831 | 50.749 | 534 | 240 | 7 | 18 | 551 | 22 | 532 | 2.53e-179 | 517 |
Msa1450520 | MtrunA17_Chr4g0038671 | 49.355 | 543 | 250 | 8 | 10 | 551 | 16 | 534 | 3.53e-179 | 517 |
Msa1450520 | MtrunA17_Chr8g0374271 | 49.064 | 534 | 244 | 8 | 22 | 551 | 26 | 535 | 2.76e-177 | 512 |
Msa1450520 | MtrunA17_Chr4g0075071 | 48.168 | 546 | 261 | 7 | 8 | 551 | 11 | 536 | 9.42e-172 | 498 |
Msa1450520 | MtrunA17_Chr4g0043251 | 47.509 | 562 | 275 | 8 | 1 | 558 | 1 | 546 | 9.25e-171 | 496 |
Msa1450520 | MtrunA17_Chr4g0043261 | 45.273 | 550 | 277 | 7 | 13 | 558 | 11 | 540 | 3.43e-161 | 471 |
Msa1450520 | MtrunA17_Chr3g0121151 | 44.865 | 555 | 276 | 8 | 15 | 558 | 50 | 585 | 8.24e-157 | 462 |
Msa1450520 | MtrunA17_Chr3g0121161 | 45.144 | 556 | 273 | 10 | 15 | 558 | 50 | 585 | 7.67e-156 | 459 |
Msa1450520 | MtrunA17_Chr4g0024641 | 52.155 | 464 | 200 | 7 | 89 | 551 | 13 | 455 | 7.26e-155 | 469 |
Msa1450520 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 886 | 951 | 4.76e-14 | 75.5 |
Msa1450520 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 514 | 579 | 6.61e-14 | 75.1 |
Msa1450520 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 576 | 641 | 6.61e-14 | 75.1 |
Msa1450520 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 638 | 703 | 6.61e-14 | 75.1 |
Msa1450520 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 700 | 765 | 6.61e-14 | 75.1 |
Msa1450520 | MtrunA17_Chr4g0024641 | 48.485 | 66 | 34 | 0 | 486 | 551 | 824 | 889 | 6.61e-14 | 75.1 |
Msa1450520 | MtrunA17_Chr4g0024641 | 50.820 | 61 | 30 | 0 | 491 | 551 | 457 | 517 | 1.74e-13 | 73.9 |
Msa1450520 | MtrunA17_Chr4g0024641 | 46.970 | 66 | 35 | 0 | 486 | 551 | 762 | 827 | 6.51e-13 | 72.0 |
Msa1450520 | MtrunA17_Chr3g0121171 | 45.772 | 544 | 269 | 7 | 22 | 558 | 21 | 545 | 8.10e-146 | 465 |
Msa1450520 | MtrunA17_Chr3g0121171 | 45.324 | 556 | 272 | 10 | 15 | 558 | 585 | 1120 | 2.06e-144 | 461 |
Msa1450520 | MtrunA17_Chr3g0121171 | 44.685 | 555 | 277 | 8 | 15 | 558 | 1160 | 1695 | 6.74e-143 | 457 |
Msa1450520 | MtrunA17_Chr3g0121171 | 43.705 | 556 | 272 | 11 | 15 | 558 | 1735 | 2261 | 7.30e-136 | 437 |
Msa1450520 | MtrunA17_Chr1g0197301 | 48.348 | 333 | 164 | 6 | 220 | 550 | 4 | 330 | 8.62e-102 | 311 |
Msa1450520 | MtrunA17_Chr5g0404341 | 29.474 | 570 | 356 | 18 | 9 | 549 | 14 | 566 | 3.85e-62 | 215 |
Msa1450520 | MtrunA17_Chr5g0404361 | 29.534 | 579 | 360 | 19 | 1 | 549 | 51 | 611 | 7.10e-60 | 209 |
Msa1450520 | MtrunA17_Chr7g0238941 | 29.101 | 567 | 332 | 19 | 29 | 549 | 36 | 578 | 1.82e-54 | 194 |
Msa1450520 | MtrunA17_Chr7g0238351 | 28.670 | 579 | 367 | 18 | 6 | 549 | 14 | 581 | 2.95e-53 | 191 |
Msa1450520 | MtrunA17_Chr3g0118321 | 27.367 | 581 | 362 | 21 | 6 | 550 | 7 | 563 | 7.29e-53 | 189 |
Msa1450520 | MtrunA17_Chr8g0346581 | 28.599 | 521 | 335 | 14 | 29 | 522 | 36 | 546 | 2.03e-52 | 188 |
Msa1450520 | MtrunA17_Chr7g0237491 | 27.931 | 580 | 369 | 20 | 6 | 549 | 14 | 580 | 2.71e-52 | 188 |
Msa1450520 | MtrunA17_Chr5g0429511 | 28.371 | 571 | 361 | 19 | 7 | 549 | 8 | 558 | 1.24e-51 | 186 |
Msa1450520 | MtrunA17_Chr4g0031901 | 27.788 | 547 | 334 | 13 | 8 | 514 | 25 | 550 | 1.64e-51 | 186 |
Msa1450520 | MtrunA17_Chr1g0197311 | 41.152 | 243 | 105 | 4 | 10 | 221 | 8 | 243 | 8.07e-51 | 175 |
Msa1450520 | MtrunA17_Chr7g0237441 | 27.336 | 578 | 375 | 18 | 6 | 549 | 14 | 580 | 5.55e-50 | 182 |
Msa1450520 | MtrunA17_Chr4g0005921 | 26.703 | 543 | 365 | 15 | 29 | 549 | 26 | 557 | 6.83e-50 | 181 |
Msa1450520 | MtrunA17_Chr3g0104061 | 28.159 | 554 | 351 | 20 | 24 | 549 | 22 | 556 | 5.90e-49 | 179 |
Msa1450520 | MtrunA17_Chr8g0382691 | 29.371 | 572 | 341 | 19 | 17 | 551 | 24 | 569 | 1.22e-48 | 178 |
Msa1450520 | MtrunA17_Chr3g0118331 | 28.086 | 559 | 342 | 20 | 29 | 550 | 27 | 562 | 1.38e-47 | 175 |
Msa1450520 | MtrunA17_Chr5g0431581 | 27.417 | 569 | 371 | 17 | 10 | 549 | 5 | 560 | 1.94e-46 | 172 |
Msa1450520 | MtrunA17_Chr5g0436461 | 26.970 | 571 | 368 | 20 | 6 | 549 | 6 | 554 | 1.58e-45 | 169 |
Msa1450520 | MtrunA17_Chr7g0240971 | 28.223 | 574 | 340 | 19 | 6 | 531 | 3 | 552 | 9.36e-44 | 164 |
Msa1450520 | MtrunA17_Chr3g0114211 | 28.358 | 536 | 341 | 17 | 9 | 514 | 13 | 535 | 1.61e-43 | 164 |
Msa1450520 | MtrunA17_Chr5g0437681 | 28.166 | 529 | 335 | 16 | 14 | 509 | 11 | 527 | 3.21e-43 | 162 |
Msa1450520 | MtrunA17_Chr7g0238981 | 26.763 | 553 | 365 | 17 | 29 | 549 | 49 | 593 | 9.69e-43 | 162 |
Msa1450520 | MtrunA17_Chr4g0008521 | 26.476 | 559 | 363 | 12 | 27 | 549 | 26 | 572 | 3.23e-41 | 157 |
Msa1450520 | MtrunA17_Chr7g0240991 | 28.796 | 573 | 358 | 20 | 15 | 549 | 11 | 571 | 3.80e-41 | 157 |
Msa1450520 | MtrunA17_Chr2g0278811 | 25.376 | 599 | 384 | 19 | 6 | 549 | 17 | 607 | 1.78e-39 | 152 |
Msa1450520 | MtrunA17_Chr4g0075781 | 37.778 | 225 | 78 | 5 | 133 | 355 | 3 | 167 | 1.35e-36 | 134 |
Msa1450520 | MtrunA17_Chr3g0118341 | 35.714 | 168 | 102 | 6 | 8 | 172 | 8 | 172 | 3.51e-24 | 100 |
Msa1450520 | MtrunA17_Chr3g0133871 | 31.980 | 197 | 125 | 5 | 6 | 196 | 9 | 202 | 6.25e-22 | 94.7 |
Msa1450520 | MtrunA17_Chr3g0118351 | 26.087 | 345 | 204 | 11 | 242 | 550 | 5 | 334 | 4.23e-18 | 86.3 |
Msa1450520 | MtrunA17_Chr4g0024651 | 46.970 | 66 | 35 | 0 | 18 | 83 | 18 | 83 | 3.56e-12 | 63.2 |
Msa1450520 | MtrunA17_Chr5g0436431 | 31.944 | 144 | 82 | 5 | 380 | 507 | 85 | 228 | 4.13e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1450520 | AT4G12420.1 | 79.359 | 562 | 115 | 1 | 6 | 566 | 3 | 564 | 0.0 | 946 |
Msa1450520 | AT4G12420.2 | 79.359 | 562 | 115 | 1 | 6 | 566 | 3 | 564 | 0.0 | 946 |
Msa1450520 | AT5G51480.1 | 65.165 | 577 | 198 | 3 | 15 | 589 | 16 | 591 | 0.0 | 794 |
Msa1450520 | AT4G25240.2 | 66.018 | 565 | 191 | 1 | 3 | 567 | 5 | 568 | 0.0 | 777 |
Msa1450520 | AT4G25240.1 | 66.018 | 565 | 191 | 1 | 3 | 567 | 5 | 568 | 0.0 | 777 |
Msa1450520 | AT5G48450.2 | 62.410 | 556 | 198 | 4 | 5 | 559 | 7 | 552 | 0.0 | 720 |
Msa1450520 | AT5G48450.1 | 62.410 | 556 | 198 | 4 | 5 | 559 | 7 | 552 | 0.0 | 720 |
Msa1450520 | AT1G76160.1 | 49.281 | 556 | 253 | 8 | 1 | 551 | 1 | 532 | 0.0 | 530 |
Msa1450520 | AT1G21850.1 | 49.081 | 544 | 254 | 6 | 9 | 551 | 11 | 532 | 0.0 | 525 |
Msa1450520 | AT4G22010.1 | 50.000 | 548 | 249 | 8 | 11 | 553 | 7 | 534 | 3.10e-180 | 520 |
Msa1450520 | AT1G41830.1 | 48.816 | 549 | 256 | 7 | 6 | 553 | 11 | 535 | 3.91e-180 | 520 |
Msa1450520 | AT1G21860.1 | 48.346 | 544 | 258 | 6 | 9 | 551 | 11 | 532 | 6.69e-180 | 519 |
Msa1450520 | AT4G38420.1 | 49.724 | 543 | 246 | 9 | 16 | 551 | 19 | 541 | 9.70e-175 | 506 |
Msa1450520 | AT1G55570.1 | 47.417 | 542 | 264 | 7 | 17 | 553 | 19 | 544 | 3.12e-173 | 503 |
Msa1450520 | AT3G13390.1 | 48.059 | 541 | 260 | 7 | 23 | 558 | 24 | 548 | 4.98e-171 | 497 |
Msa1450520 | AT4G28090.1 | 49.074 | 540 | 250 | 10 | 16 | 551 | 18 | 536 | 1.78e-168 | 490 |
Msa1450520 | AT5G66920.1 | 46.629 | 534 | 256 | 8 | 22 | 551 | 32 | 540 | 8.90e-168 | 489 |
Msa1450520 | AT4G37160.1 | 48.820 | 551 | 254 | 10 | 8 | 553 | 11 | 538 | 7.06e-167 | 486 |
Msa1450520 | AT1G55560.1 | 45.714 | 560 | 278 | 9 | 6 | 558 | 5 | 545 | 9.40e-167 | 486 |
Msa1450520 | AT3G13400.2 | 45.648 | 563 | 284 | 9 | 1 | 558 | 1 | 546 | 7.82e-166 | 484 |
Msa1450520 | AT3G13400.1 | 45.648 | 563 | 284 | 9 | 1 | 558 | 1 | 546 | 7.82e-166 | 484 |
Msa1450520 | AT1G75790.1 | 45.073 | 548 | 273 | 10 | 16 | 553 | 16 | 545 | 3.09e-159 | 467 |
Msa1450520 | AT2G23630.2 | 47.940 | 534 | 256 | 7 | 22 | 554 | 30 | 542 | 2.56e-158 | 464 |
Msa1450520 | AT2G23630.1 | 47.940 | 534 | 256 | 7 | 22 | 554 | 25 | 537 | 3.43e-158 | 464 |
Msa1450520 | AT4G38420.3 | 49.068 | 483 | 219 | 9 | 16 | 491 | 19 | 481 | 6.60e-149 | 439 |
Msa1450520 | AT4G38420.2 | 49.123 | 456 | 205 | 9 | 16 | 464 | 19 | 454 | 1.12e-138 | 411 |
Msa1450520 | AT4G37160.2 | 49.134 | 462 | 207 | 10 | 8 | 464 | 11 | 449 | 1.28e-137 | 408 |
Msa1450520 | AT5G21105.1 | 28.916 | 581 | 351 | 19 | 8 | 550 | 20 | 576 | 5.20e-58 | 204 |
Msa1450520 | AT5G21100.1 | 28.322 | 572 | 346 | 18 | 18 | 550 | 15 | 561 | 1.35e-55 | 197 |
Msa1450520 | AT5G21105.3 | 28.810 | 538 | 326 | 17 | 8 | 507 | 20 | 538 | 4.56e-54 | 192 |
Msa1450520 | AT4G39830.1 | 27.087 | 587 | 371 | 17 | 6 | 553 | 13 | 581 | 1.50e-53 | 192 |
Msa1450520 | AT2G30210.1 | 28.229 | 542 | 348 | 16 | 6 | 518 | 9 | 538 | 1.75e-51 | 186 |
Msa1450520 | AT1G18140.1 | 28.998 | 569 | 338 | 21 | 29 | 549 | 31 | 581 | 1.37e-50 | 184 |
Msa1450520 | AT5G58910.2 | 27.257 | 576 | 367 | 19 | 6 | 549 | 12 | 567 | 7.60e-50 | 182 |
Msa1450520 | AT2G46570.1 | 28.442 | 552 | 348 | 17 | 29 | 549 | 34 | 569 | 5.79e-49 | 179 |
Msa1450520 | AT5G60020.1 | 27.857 | 560 | 356 | 16 | 29 | 549 | 27 | 577 | 1.47e-48 | 178 |
Msa1450520 | AT5G58910.3 | 27.431 | 576 | 365 | 20 | 6 | 549 | 12 | 566 | 2.02e-48 | 177 |
Msa1450520 | AT5G48100.1 | 26.394 | 538 | 362 | 10 | 1 | 514 | 1 | 528 | 2.20e-48 | 177 |
Msa1450520 | AT5G09360.1 | 29.049 | 568 | 354 | 20 | 6 | 544 | 18 | 565 | 5.56e-48 | 176 |
Msa1450520 | AT5G60020.3 | 28.125 | 544 | 343 | 16 | 45 | 549 | 11 | 545 | 1.21e-47 | 175 |
Msa1450520 | AT2G29130.1 | 26.950 | 564 | 347 | 16 | 29 | 549 | 32 | 573 | 1.89e-47 | 175 |
Msa1450520 | AT5G03260.1 | 26.795 | 571 | 373 | 16 | 6 | 549 | 5 | 557 | 7.39e-46 | 170 |
Msa1450520 | AT5G60020.2 | 27.938 | 519 | 330 | 14 | 29 | 510 | 27 | 538 | 2.44e-45 | 169 |
Msa1450520 | AT2G38080.1 | 25.342 | 584 | 375 | 18 | 1 | 549 | 1 | 558 | 3.84e-45 | 168 |
Msa1450520 | AT5G01190.1 | 26.667 | 570 | 375 | 18 | 9 | 549 | 3 | 558 | 6.87e-45 | 167 |
Msa1450520 | AT5G05390.1 | 26.945 | 527 | 344 | 15 | 13 | 509 | 10 | 525 | 8.82e-45 | 167 |
Msa1450520 | AT3G09220.1 | 26.908 | 524 | 347 | 14 | 14 | 509 | 12 | 527 | 7.03e-43 | 162 |
Msa1450520 | AT5G07130.1 | 27.133 | 586 | 362 | 19 | 8 | 558 | 7 | 562 | 1.18e-42 | 161 |
Msa1450520 | AT5G01190.2 | 26.894 | 528 | 347 | 17 | 47 | 549 | 31 | 544 | 1.71e-42 | 160 |
Msa1450520 | AT5G01040.1 | 28.157 | 586 | 360 | 20 | 6 | 551 | 4 | 568 | 1.93e-42 | 161 |
Msa1450520 | AT5G58910.1 | 27.002 | 537 | 336 | 19 | 45 | 549 | 11 | 523 | 2.81e-42 | 160 |
Msa1450520 | AT5G01050.1 | 27.598 | 587 | 347 | 19 | 13 | 551 | 14 | 570 | 3.80e-42 | 160 |
Msa1450520 | AT4G39830.3 | 26.358 | 497 | 312 | 15 | 93 | 553 | 6 | 484 | 4.47e-38 | 147 |
Msa1450520 | AT2G40370.1 | 25.801 | 562 | 359 | 17 | 6 | 522 | 7 | 555 | 4.96e-38 | 148 |
Msa1450520 | AT4G39830.2 | 26.358 | 497 | 312 | 15 | 93 | 553 | 8 | 486 | 5.12e-38 | 147 |
Msa1450520 | AT2G46570.2 | 28.024 | 496 | 310 | 17 | 85 | 549 | 5 | 484 | 4.05e-36 | 141 |
Msa1450520 | AT4G39830.4 | 25.553 | 497 | 303 | 14 | 93 | 553 | 8 | 473 | 1.16e-33 | 134 |
Msa1450520 | AT5G21105.2 | 27.919 | 394 | 229 | 13 | 191 | 550 | 13 | 385 | 4.37e-32 | 128 |
Msa1450520 | AT3G09220.2 | 25.688 | 436 | 290 | 12 | 100 | 509 | 3 | 430 | 9.79e-28 | 117 |
Msa1450520 | AT5G07130.2 | 26.389 | 504 | 308 | 18 | 90 | 558 | 2 | 477 | 3.72e-27 | 115 |
Msa1450520 | AT5G07130.3 | 26.389 | 504 | 308 | 18 | 90 | 558 | 2 | 477 | 3.72e-27 | 115 |
Find 165 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGAAGTCTGCCACATTTA+AGG | 0.121560 | tig0032970:-16476 | None:intergenic |
TGGCTCCCAGTTTAATTATT+TGG | 0.135294 | tig0032970:+16867 | Msa1450520:three_prime_UTR |
TGGAAGCTTTAGAGGATTTA+TGG | 0.153986 | tig0032970:+15645 | Msa1450520:CDS |
TATCAACAAGTCTGAATTTC+AGG | 0.211179 | tig0032970:+14799 | Msa1450520:CDS |
CTGAAAGATCCTTGTGGATT+TGG | 0.240958 | tig0032970:-15403 | None:intergenic |
CAAAGAGCAGCTGGTGGATT+TGG | 0.248226 | tig0032970:+13840 | Msa1450520:CDS |
TGTTCAAAATCGATGTTATC+AGG | 0.265298 | tig0032970:-14171 | None:intergenic |
TGCTGACCATTACAAATTAA+AGG | 0.265825 | tig0032970:+15552 | Msa1450520:CDS |
TGTAAATCAAATCACATAAA+AGG | 0.271262 | tig0032970:+12901 | Msa1450520:five_prime_UTR |
GTAATTACTACAACAATTAT+AGG | 0.281133 | tig0032970:-16912 | None:intergenic |
GGCTCCCAGTTTAATTATTT+GGG | 0.283123 | tig0032970:+16868 | Msa1450520:three_prime_UTR |
GGTGAAGAAGCCATTGAATA+TGG | 0.286975 | tig0032970:-12981 | None:intergenic |
AGTGTCCCAAATAATTAAAC+TGG | 0.299901 | tig0032970:-16873 | None:intergenic |
TGGTAAGTCCAGTTCCATTT+TGG | 0.301426 | tig0032970:-13762 | None:intergenic |
TGGAGCATGGACAGCAGTTT+TGG | 0.302215 | tig0032970:+16317 | Msa1450520:CDS |
CCACAAGGATCTTTCAGATA+TGG | 0.317042 | tig0032970:+15409 | Msa1450520:CDS |
GTAATCAATGGAAGCTTTAG+AGG | 0.317693 | tig0032970:+15637 | Msa1450520:CDS |
TACATCACTGCTTCTCCTCT+TGG | 0.321669 | tig0032970:+13092 | Msa1450520:CDS |
GTATGAAACCTCAAAATCAT+AGG | 0.321799 | tig0032970:-13072 | None:intergenic |
TCATGGCAAGATGGTGTTCT+TGG | 0.331310 | tig0032970:+13720 | Msa1450520:CDS |
TCACGTTGGCAACGAGTTAC+TGG | 0.341690 | tig0032970:+14993 | Msa1450520:CDS |
CCCTCGACAATGTTGGAGTT+TGG | 0.344346 | tig0032970:+16343 | Msa1450520:CDS |
ACCCGAGGAGGTCCGGTTAG+AGG | 0.356788 | tig0032970:-15604 | None:intergenic |
CACAGCAACATTGTTGTTTG+TGG | 0.367710 | tig0032970:-13389 | None:intergenic |
CTGAAGTCTGCCACATTTAA+GGG | 0.371433 | tig0032970:-16475 | None:intergenic |
AGTGTGTCATTATATCTATA+AGG | 0.373217 | tig0032970:-14144 | None:intergenic |
TTAGTTGATTGCGAAGAGTT+TGG | 0.378240 | tig0032970:+16732 | Msa1450520:three_prime_UTR |
CCGTCTGTTTAGGTTTATCC+TGG | 0.379057 | tig0032970:+16297 | Msa1450520:intron |
AACCTTGATTCATGGTATCT+TGG | 0.379868 | tig0032970:+16381 | Msa1450520:CDS |
GAACAGAAAACCTTGATTCA+TGG | 0.383673 | tig0032970:+16373 | Msa1450520:CDS |
CTAGATGATGGAAAAGATCT+TGG | 0.385324 | tig0032970:+14087 | Msa1450520:CDS |
ATTGTCCTATTCCACCAAAA+TGG | 0.389757 | tig0032970:+13748 | Msa1450520:CDS |
CCAATCCTGCCACTCCAATC+AGG | 0.392379 | tig0032970:+15527 | Msa1450520:CDS |
GCTGACCATTACAAATTAAA+GGG | 0.394425 | tig0032970:+15553 | Msa1450520:CDS |
TCCTCTTGGAGTACCCCAAC+AGG | 0.398295 | tig0032970:+13106 | Msa1450520:CDS |
GGACTATGAAAGAAAGAAAC+TGG | 0.404207 | tig0032970:-12845 | None:intergenic |
GTAAATCTCTGTCACGTTGA+TGG | 0.410681 | tig0032970:-15434 | None:intergenic |
GCCTCTAACCGGACCTCCTC+GGG | 0.410839 | tig0032970:+15603 | Msa1450520:CDS |
TCTGATCCTTCACTTGAAAC+TGG | 0.411595 | tig0032970:-13782 | None:intergenic |
CTGCTTCAATCAACGGGAAT+GGG | 0.420025 | tig0032970:+16621 | Msa1450520:CDS |
CCAGATGGTGTTCTCATCAA+TGG | 0.420137 | tig0032970:+14114 | Msa1450520:CDS |
TAATGGTCAGCAAGCCTGAT+TGG | 0.424218 | tig0032970:-15541 | None:intergenic |
GCTATCAACAAACAGTTTCC+AGG | 0.425051 | tig0032970:+13349 | Msa1450520:CDS |
TGTGAATGTCCACAACAAAT+TGG | 0.425756 | tig0032970:+13408 | Msa1450520:CDS |
ATGAAAACCTCCTCATTCAT+TGG | 0.431957 | tig0032970:+13431 | Msa1450520:CDS |
CTATTCCACCAAAATGGAAC+TGG | 0.434841 | tig0032970:+13754 | Msa1450520:CDS |
ATACTCCCTTTAATTTGTAA+TGG | 0.435490 | tig0032970:-15558 | None:intergenic |
TTCAGCAAAGGAGGAGTTCA+TGG | 0.435896 | tig0032970:+13703 | Msa1450520:CDS |
TTTCATCTGCTTCAATCAAC+GGG | 0.436558 | tig0032970:+16615 | Msa1450520:CDS |
GATTGGAGAAGTGGTGTGGA+AGG | 0.436667 | tig0032970:-12791 | None:intergenic |
TTGCGAAGAGTTTGGCTTGT+TGG | 0.437484 | tig0032970:+16740 | Msa1450520:three_prime_UTR |
TGGCTTGTTGGTGAGATTTG+TGG | 0.442184 | tig0032970:+16752 | Msa1450520:three_prime_UTR |
TCATGTATCAAGAATGTGAT+TGG | 0.443040 | tig0032970:-16934 | None:intergenic |
TTGTGTCTATAAGGAAAGAA+AGG | 0.444984 | tig0032970:-12866 | None:intergenic |
CCACATTTAAGGGCATTGTC+TGG | 0.445078 | tig0032970:-16465 | None:intergenic |
TGAACCAAGCAAGATCTATC+AGG | 0.449999 | tig0032970:+15108 | Msa1450520:CDS |
CCTGATTGGAGTGGCAGGAT+TGG | 0.450544 | tig0032970:-15527 | None:intergenic |
AGAGAGAGAGATTGGAGAAG+TGG | 0.454756 | tig0032970:-12800 | None:intergenic |
GCAGGATGGACTTCGGAGAT+TGG | 0.461973 | tig0032970:+15825 | Msa1450520:intron |
GTGTGTCATTATATCTATAA+GGG | 0.466183 | tig0032970:-14143 | None:intergenic |
AAAACAACAATGTCCCCTTC+CGG | 0.467709 | tig0032970:-13912 | None:intergenic |
TTGGTCAAGAAACATACATC+AGG | 0.467887 | tig0032970:+16400 | Msa1450520:CDS |
ATGCATACTTATCACTTGAA+TGG | 0.471335 | tig0032970:+15697 | Msa1450520:CDS |
TTTCCCACGAAGCCTCTAAC+CGG | 0.473650 | tig0032970:+15592 | Msa1450520:CDS |
ACTACATTGTCGCAAGTGCC+AGG | 0.473662 | tig0032970:+14958 | Msa1450520:CDS |
ATTTCATCTGCTTCAATCAA+CGG | 0.473734 | tig0032970:+16614 | Msa1450520:CDS |
AGACAATAGTCAAATACAAT+TGG | 0.474655 | tig0032970:+12644 | Msa1450520:five_prime_UTR |
ATGACCTCTTGCTTTCCCCT+TGG | 0.475068 | tig0032970:-15042 | None:intergenic |
GAGATTGGTCTGAGAATAGC+AGG | 0.476348 | tig0032970:+15840 | Msa1450520:CDS |
AGAGCAGCTGGTGGATTTGG+TGG | 0.476861 | tig0032970:+13843 | Msa1450520:CDS |
AAGCGGAGAGCAACACTTAG+TGG | 0.478625 | tig0032970:+15493 | Msa1450520:CDS |
CTTCAAATGGTGACAGCCTA+AGG | 0.485649 | tig0032970:-12682 | None:intergenic |
TGTTTCTACCCGAGGAGGTC+CGG | 0.488278 | tig0032970:-15611 | None:intergenic |
CGACTTCGTGTACATAATGT+TGG | 0.490869 | tig0032970:+14774 | Msa1450520:CDS |
GAGACCTGATAGATCTTGCT+TGG | 0.490869 | tig0032970:-15112 | None:intergenic |
GACCAAGATACCATGAATCA+AGG | 0.492744 | tig0032970:-16383 | None:intergenic |
ATTAATGTAGGCTTTGAGAA+AGG | 0.494130 | tig0032970:+14062 | Msa1450520:intron |
TTGAGAAAGGCTCTAGATGA+TGG | 0.494379 | tig0032970:+14075 | Msa1450520:CDS |
TCTGCTTCAATCAACGGGAA+TGG | 0.495180 | tig0032970:+16620 | Msa1450520:CDS |
CAGATGGTGTTCTCATCAAT+GGG | 0.495277 | tig0032970:+14115 | Msa1450520:CDS |
GTATAGTATGAACTGTCCTT+AGG | 0.496777 | tig0032970:+12666 | Msa1450520:five_prime_UTR |
AAAACTGCTGTCCATGCTCC+AGG | 0.500206 | tig0032970:-16315 | None:intergenic |
GCAAGCCTGATTGGAGTGGC+AGG | 0.508141 | tig0032970:-15532 | None:intergenic |
CTTGCACTATTCAAATTCCA+AGG | 0.508314 | tig0032970:+15025 | Msa1450520:CDS |
GTAGAAACATCAGTAATCAA+TGG | 0.512552 | tig0032970:+15625 | Msa1450520:CDS |
TCCCCTTCCGGAGTATCAAA+AGG | 0.513829 | tig0032970:-13900 | None:intergenic |
CCATTGATGAGAACACCATC+TGG | 0.514712 | tig0032970:-14114 | None:intergenic |
TTTCAAGTGAAGGATCAGAT+TGG | 0.514777 | tig0032970:+13786 | Msa1450520:CDS |
TTGTTTAGCTTAATGTTCTG+TGG | 0.516495 | tig0032970:+16847 | Msa1450520:three_prime_UTR |
TATCAAGAATTTAAGATGAA+AGG | 0.520588 | tig0032970:-16989 | None:intergenic |
TTTAGGTTTATCCTGGAGCA+TGG | 0.523365 | tig0032970:+16304 | Msa1450520:intron |
TTTGTGGTTACATTAATAGT+AGG | 0.524783 | tig0032970:-13373 | None:intergenic |
GCTGAAGTTGTTATTCACTT+TGG | 0.525996 | tig0032970:+16643 | Msa1450520:CDS |
TGAACTTGCATTCTGATCCA+TGG | 0.528156 | tig0032970:-14931 | None:intergenic |
TAGAGTGGACACTGGATGGA+TGG | 0.533731 | tig0032970:-12729 | None:intergenic |
GAGAGATTGGAGAAGTGGTG+TGG | 0.540422 | tig0032970:-12795 | None:intergenic |
TTGCACTATTCAAATTCCAA+GGG | 0.541633 | tig0032970:+15026 | Msa1450520:CDS |
TCTCTGCTAGAAGTAAGTTA+TGG | 0.541722 | tig0032970:-14830 | None:intergenic |
GAACAAATTGATGTCAAACC+AGG | 0.544999 | tig0032970:+14189 | Msa1450520:CDS |
AATGAGTGAATGTCTTCAAA+TGG | 0.545566 | tig0032970:-12695 | None:intergenic |
TTGGTCTCCCTCGACAATGT+TGG | 0.545883 | tig0032970:+16336 | Msa1450520:CDS |
AAACCACCAGTGAAAATCGA+TGG | 0.548420 | tig0032970:+15469 | Msa1450520:CDS |
ATACATCAGGGTTGTCAACC+CGG | 0.551620 | tig0032970:+16413 | Msa1450520:CDS |
TTGATGAGAAAGAAGAAGAG+AGG | 0.551843 | tig0032970:-13002 | None:intergenic |
TGGCAACGAGTTACTGGAGT+TGG | 0.551919 | tig0032970:+14999 | Msa1450520:CDS |
GCTCTTTGAAAATTAAGTGA+AGG | 0.552773 | tig0032970:-13825 | None:intergenic |
CAGTGAAAATCGATGGGAAG+CGG | 0.553222 | tig0032970:+15476 | Msa1450520:CDS |
ATCAAAAGGAACAGAAATGA+CGG | 0.554519 | tig0032970:-13886 | None:intergenic |
TATGAAACCTCAAAATCATA+GGG | 0.554546 | tig0032970:-13071 | None:intergenic |
AGCAAGAGGTCATTTACCAC+CGG | 0.555237 | tig0032970:+15052 | Msa1450520:CDS |
ACTAGCTTAGATATTCATGT+TGG | 0.562613 | tig0032970:+14885 | Msa1450520:CDS |
CAAGTGATAAGTATGCATCT+TGG | 0.565246 | tig0032970:-15692 | None:intergenic |
TTAAGGGCATTGTCTGGCAT+CGG | 0.569023 | tig0032970:-16459 | None:intergenic |
ATTGACTGCAGGATGGACTT+CGG | 0.572724 | tig0032970:+15818 | Msa1450520:intron |
AGGAGGAGTTCATGGCAAGA+TGG | 0.573398 | tig0032970:+13711 | Msa1450520:CDS |
GACTTACCAGTTTCAAGTGA+AGG | 0.574483 | tig0032970:+13776 | Msa1450520:CDS |
CGCAATCAACTAATTAAGAG+AGG | 0.574815 | tig0032970:-16722 | None:intergenic |
GATGAAAGGAAAGTATGAAG+TGG | 0.579445 | tig0032970:-16975 | None:intergenic |
AACCACCAGTGAAAATCGAT+GGG | 0.582588 | tig0032970:+15470 | Msa1450520:CDS |
CAGCTGAAGAGAGTGTAAGA+AGG | 0.584437 | tig0032970:-13034 | None:intergenic |
AAACAACCTACCAATGAATG+AGG | 0.588957 | tig0032970:-13441 | None:intergenic |
ACGTGATTCATTCACAAACC+TGG | 0.590454 | tig0032970:-14976 | None:intergenic |
GGTGTTCTCATCAATGGGAA+AGG | 0.593689 | tig0032970:+14120 | Msa1450520:CDS |
CCAGACAATGCCCTTAAATG+TGG | 0.594808 | tig0032970:+16465 | Msa1450520:CDS |
ATTACTGATGTTTCTACCCG+AGG | 0.595120 | tig0032970:-15619 | None:intergenic |
GCAGGGGTACATATAACAAG+TGG | 0.596349 | tig0032970:+15858 | Msa1450520:CDS |
GGTACATATAACAAGTGGGA+TGG | 0.596737 | tig0032970:+15863 | Msa1450520:CDS |
TCAAATTGATCATCTGGACC+CGG | 0.598046 | tig0032970:-15071 | None:intergenic |
TGGTGGTTGAAATAGGTCTG+GGG | 0.600438 | tig0032970:+13680 | Msa1450520:intron |
TCAAAAGGAACAGAAATGAC+GGG | 0.601945 | tig0032970:-13885 | None:intergenic |
TTGGTACACACGCAATCACA+CGG | 0.603449 | tig0032970:+13944 | Msa1450520:CDS |
GTATGAAGTGGAAACCGTGT+TGG | 0.603967 | tig0032970:-16963 | None:intergenic |
GGTAGGTTTGAAATTTAACA+TGG | 0.604278 | tig0032970:-12575 | None:intergenic |
ATACATGAAACTTGCCAACA+CGG | 0.606070 | tig0032970:+16949 | Msa1450520:three_prime_UTR |
GGTCCGGTTAGAGGCTTCGT+GGG | 0.612012 | tig0032970:-15595 | None:intergenic |
ATTGGAGAAGTGGTGTGGAA+GGG | 0.612731 | tig0032970:-12790 | None:intergenic |
ATAGGTCTGGGGTTCAGCAA+AGG | 0.613231 | tig0032970:+13691 | Msa1450520:intron |
AATAGCTCGTACTACAGCGC+AGG | 0.617032 | tig0032970:+15886 | Msa1450520:CDS |
ACCTGTTGGGGTACTCCAAG+AGG | 0.618129 | tig0032970:-13107 | None:intergenic |
TCCAAACTCCAACATTGTCG+AGG | 0.619426 | tig0032970:-16344 | None:intergenic |
GGTCTGGGGTTCAGCAAAGG+AGG | 0.623918 | tig0032970:+13694 | Msa1450520:intron |
AATTCCAAGGGGAAAGCAAG+AGG | 0.626773 | tig0032970:+15038 | Msa1450520:CDS |
GTCAGCAAGCCTGATTGGAG+TGG | 0.632584 | tig0032970:-15536 | None:intergenic |
GCAAGAGGTCATTTACCACC+GGG | 0.637101 | tig0032970:+15053 | Msa1450520:CDS |
CCAAACTCCAACATTGTCGA+GGG | 0.637486 | tig0032970:-16343 | None:intergenic |
GTTCTAGAGTGGACACTGGA+TGG | 0.641656 | tig0032970:-12733 | None:intergenic |
TTACTTCTAGCAGAGACTGA+AGG | 0.644138 | tig0032970:+14837 | Msa1450520:CDS |
GTGTCCCAAATAATTAAACT+GGG | 0.646084 | tig0032970:-16872 | None:intergenic |
AAGGAACAGAAATGACGGGT+CGG | 0.646239 | tig0032970:-13881 | None:intergenic |
TGCACTATTCAAATTCCAAG+GGG | 0.648906 | tig0032970:+15027 | Msa1450520:CDS |
CAGGGGTACATATAACAAGT+GGG | 0.653422 | tig0032970:+15859 | Msa1450520:CDS |
TGGTCAAGAAACATACATCA+GGG | 0.655143 | tig0032970:+16401 | Msa1450520:CDS |
CCATATCTGAAAGATCCTTG+TGG | 0.657664 | tig0032970:-15409 | None:intergenic |
AAAGATCTTGGAATGCCAGA+TGG | 0.662306 | tig0032970:+14099 | Msa1450520:CDS |
CAACCTACCAATGAATGAGG+AGG | 0.666485 | tig0032970:-13438 | None:intergenic |
AGATGGAACGTATCAGCAAG+TGG | 0.669963 | tig0032970:+15373 | Msa1450520:intron |
GTTACATTAATAGTAGGACC+TGG | 0.670641 | tig0032970:-13367 | None:intergenic |
CAACATTATGTACACGAAGT+CGG | 0.670671 | tig0032970:-14773 | None:intergenic |
AGATTGGTCTGAGAATAGCA+GGG | 0.671526 | tig0032970:+15841 | Msa1450520:CDS |
ACTGATGTTTCTACCCGAGG+AGG | 0.675653 | tig0032970:-15616 | None:intergenic |
GTGTGTTCTAGAGTGGACAC+TGG | 0.679962 | tig0032970:-12737 | None:intergenic |
GGTTTGTGAATGAATCACGT+TGG | 0.686085 | tig0032970:+14979 | Msa1450520:CDS |
GATTGGTCTGAGAATAGCAG+GGG | 0.702170 | tig0032970:+15842 | Msa1450520:CDS |
AATTGATCATCTGGACCCGG+TGG | 0.707631 | tig0032970:-15068 | None:intergenic |
GGTGCTCGTCCAAATCCACA+AGG | 0.734148 | tig0032970:+15394 | Msa1450520:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGTTTTTAAAAAATTGA+GGG | + | tig0032970:16099-16118 | Msa1450520:intron | 10.0% |
!!! | TTAGTATTTGTTTCTATTTT+TGG | - | tig0032970:12551-12570 | None:intergenic | 15.0% |
!!! | AAGTTTATTTTTTTTATTGG+TGG | + | tig0032970:13663-13682 | Msa1450520:intron | 15.0% |
!!! | AAGTTTTTTGAAATTAATGT+AGG | + | tig0032970:14050-14069 | Msa1450520:intron | 15.0% |
!!! | TTTCTTTGTTAATTTTTAAC+AGG | + | tig0032970:14741-14760 | Msa1450520:intron | 15.0% |
!! | AATATATAATTCTATAGAAC+TGG | - | tig0032970:15146-15165 | None:intergenic | 15.0% |
!!! | GTTTTGTTTTTAAAAAATTG+AGG | + | tig0032970:16098-16117 | Msa1450520:intron | 15.0% |
!!! | AAAATTACCCCTTTTTTTAA+TGG | - | tig0032970:12603-12622 | None:intergenic | 20.0% |
!!! | TCAATTTTTTTGTGTCTATA+AGG | - | tig0032970:12878-12897 | None:intergenic | 20.0% |
!! | TGTAAATCAAATCACATAAA+AGG | + | tig0032970:12901-12920 | Msa1450520:five_prime_UTR | 20.0% |
!! | TGTTATAGTTAAACTTGAAA+AGG | + | tig0032970:13243-13262 | Msa1450520:intron | 20.0% |
!! | GTTATAGTTAAACTTGAAAA+GGG | + | tig0032970:13244-13263 | Msa1450520:intron | 20.0% |
!! | GTTATATAGAAAAGATGTAA+AGG | + | tig0032970:13286-13305 | Msa1450520:intron | 20.0% |
!!! | ATGTTTTTCATTGTTTATGT+AGG | + | tig0032970:13321-13340 | Msa1450520:intron | 20.0% |
!! | GTTTAAAAAGTTGAAAACTT+TGG | + | tig0032970:13622-13641 | Msa1450520:intron | 20.0% |
!!! | TTACTTTTCAAATACTGATA+TGG | + | tig0032970:14264-14283 | Msa1450520:intron | 20.0% |
!!! | TTGTTTTTCAAATACTGATA+TGG | + | tig0032970:14326-14345 | Msa1450520:intron | 20.0% |
!!! | GCTTTTAGTAAATTAAGATT+AGG | + | tig0032970:14496-14515 | Msa1450520:intron | 20.0% |
!!! | TATCAACTTTAGAATTCATT+AGG | + | tig0032970:15226-15245 | Msa1450520:intron | 20.0% |
!! | ACATATTTAATATGTCAACA+CGG | - | tig0032970:15258-15277 | None:intergenic | 20.0% |
!! | TGGTTTATGAAAAAAAAAGA+AGG | - | tig0032970:16011-16030 | None:intergenic | 20.0% |
!! | TTACTGAAAAATGTTCATTA+TGG | - | tig0032970:16684-16703 | None:intergenic | 20.0% |
!! | GTAATTACTACAACAATTAT+AGG | - | tig0032970:16915-16934 | None:intergenic | 20.0% |
!!! | TATCAAGAATTTAAGATGAA+AGG | - | tig0032970:16992-17011 | None:intergenic | 20.0% |
! | AGACAATAGTCAAATACAAT+TGG | + | tig0032970:12644-12663 | Msa1450520:five_prime_UTR | 25.0% |
!!! | CATTGAATATGGAACTTTTT+TGG | - | tig0032970:12973-12992 | None:intergenic | 25.0% |
! | CAAAAAAGTTCCATATTCAA+TGG | + | tig0032970:12971-12990 | Msa1450520:exon | 25.0% |
! | TATGAAACCTCAAAATCATA+GGG | - | tig0032970:13074-13093 | None:intergenic | 25.0% |
!! | CTTCTTTCTCTTACTATTTT+TGG | + | tig0032970:13134-13153 | Msa1450520:intron | 25.0% |
!!! | TCTCTTACTATTTTTGGAAA+TGG | + | tig0032970:13140-13159 | Msa1450520:intron | 25.0% |
!!! | CTCTTACTATTTTTGGAAAT+GGG | + | tig0032970:13141-13160 | Msa1450520:intron | 25.0% |
! | TTTGTGGTTACATTAATAGT+AGG | - | tig0032970:13376-13395 | None:intergenic | 25.0% |
!!! | TTTTTATTGGTGGTTGAAAT+AGG | + | tig0032970:13673-13692 | Msa1450520:intron | 25.0% |
!! | GTGTGTCATTATATCTATAA+GGG | - | tig0032970:14146-14165 | None:intergenic | 25.0% |
!! | AGTGTGTCATTATATCTATA+AGG | - | tig0032970:14147-14166 | None:intergenic | 25.0% |
!!! | TGATATGGATGTTTTTTGTT+TGG | + | tig0032970:14279-14298 | Msa1450520:intron | 25.0% |
! | AAACATTAGAAACATTTGAC+AGG | - | tig0032970:14724-14743 | None:intergenic | 25.0% |
! | AATTATATAGTCTGCATTAG+TGG | - | tig0032970:15308-15327 | None:intergenic | 25.0% |
!!! | ATACTCCCTTTAATTTGTAA+TGG | - | tig0032970:15561-15580 | None:intergenic | 25.0% |
!!! | GATATGCATTTTTTGTTGTA+GGG | + | tig0032970:15719-15738 | Msa1450520:CDS | 25.0% |
! | AAAGTCAATGATGAAAATCA+AGG | - | tig0032970:16077-16096 | None:intergenic | 25.0% |
! | ACTTTATCCAACATACTATT+TGG | + | tig0032970:16185-16204 | Msa1450520:intron | 25.0% |
! | TAGTAAACCAAATAGTATGT+TGG | - | tig0032970:16195-16214 | None:intergenic | 25.0% |
! | TAGTTGTGTATAAAACTTGT+AGG | - | tig0032970:16264-16283 | None:intergenic | 25.0% |
!!! | GATGTAAATTTTCTTGTTTC+AGG | + | tig0032970:16579-16598 | Msa1450520:intron | 25.0% |
!!! | GCAGATGAAATAATTTTTTG+AGG | - | tig0032970:16605-16624 | None:intergenic | 25.0% |
! | GGTAGGTTTGAAATTTAACA+TGG | - | tig0032970:12578-12597 | None:intergenic | 30.0% |
ACCTACCTTCCATTAAAAAA+AGG | + | tig0032970:12591-12610 | Msa1450520:five_prime_UTR | 30.0% | |
CCTACCTTCCATTAAAAAAA+GGG | + | tig0032970:12592-12611 | Msa1450520:five_prime_UTR | 30.0% | |
CTACCTTCCATTAAAAAAAG+GGG | + | tig0032970:12593-12612 | Msa1450520:five_prime_UTR | 30.0% | |
!!! | TTACCCCTTTTTTTAATGGA+AGG | - | tig0032970:12599-12618 | None:intergenic | 30.0% |
AATGAGTGAATGTCTTCAAA+TGG | - | tig0032970:12698-12717 | None:intergenic | 30.0% | |
TTAGCTGTGGTGTAAAAAAA+AGG | - | tig0032970:12762-12781 | None:intergenic | 30.0% | |
TTGTGTCTATAAGGAAAGAA+AGG | - | tig0032970:12869-12888 | None:intergenic | 30.0% | |
! | ATTTGTTCCCTATGATTTTG+AGG | + | tig0032970:13064-13083 | Msa1450520:CDS | 30.0% |
GTATGAAACCTCAAAATCAT+AGG | - | tig0032970:13075-13094 | None:intergenic | 30.0% | |
AGAAAGAAGAAAAACCTGTT+GGG | - | tig0032970:13123-13142 | None:intergenic | 30.0% | |
TAACTATTACGTATGAAGCA+TGG | + | tig0032970:13509-13528 | Msa1450520:intron | 30.0% | |
TTATTAGACGTTATGAAGCA+CGG | - | tig0032970:13594-13613 | None:intergenic | 30.0% | |
! | GCTCTTTGAAAATTAAGTGA+AGG | - | tig0032970:13828-13847 | None:intergenic | 30.0% |
ATCAAAAGGAACAGAAATGA+CGG | - | tig0032970:13889-13908 | None:intergenic | 30.0% | |
!!! | TTGTTGTTTTTATTGGCGAT+TGG | + | tig0032970:13925-13944 | Msa1450520:CDS | 30.0% |
GATTCTGTGTTAGATTAGAT+TGG | + | tig0032970:14008-14027 | Msa1450520:intron | 30.0% | |
!! | ATTAATGTAGGCTTTGAGAA+AGG | + | tig0032970:14062-14081 | Msa1450520:intron | 30.0% |
TGTTCAAAATCGATGTTATC+AGG | - | tig0032970:14174-14193 | None:intergenic | 30.0% | |
TTGTATTTCAAGAAGTTACC+TGG | - | tig0032970:14210-14229 | None:intergenic | 30.0% | |
TATTTCTTTGTAGTCACTCA+TGG | - | tig0032970:14399-14418 | None:intergenic | 30.0% | |
CTCTTGTATACAATTTCTCT+AGG | + | tig0032970:14430-14449 | Msa1450520:intron | 30.0% | |
ATTAAGATTAGGCACTCAAA+AGG | + | tig0032970:14507-14526 | Msa1450520:intron | 30.0% | |
CTACTAACAGATATTAGTCA+AGG | - | tig0032970:14616-14635 | None:intergenic | 30.0% | |
GTATGTTAGAACAATGAGTT+CGG | + | tig0032970:14648-14667 | Msa1450520:intron | 30.0% | |
TATCAACAAGTCTGAATTTC+AGG | + | tig0032970:14799-14818 | Msa1450520:CDS | 30.0% | |
! | ACTAGCTTAGATATTCATGT+TGG | + | tig0032970:14885-14904 | Msa1450520:CDS | 30.0% |
! | TGGACAATCTTATTCTTTTC+TGG | + | tig0032970:14905-14924 | Msa1450520:CDS | 30.0% |
!! | TTATTCTTTTCTGGTAACCA+TGG | + | tig0032970:14914-14933 | Msa1450520:CDS | 30.0% |
TTGCACTATTCAAATTCCAA+GGG | + | tig0032970:15026-15045 | Msa1450520:CDS | 30.0% | |
! | GTTTTGTCAAATTGATCATC+TGG | - | tig0032970:15080-15099 | None:intergenic | 30.0% |
TGCTGACCATTACAAATTAA+AGG | + | tig0032970:15552-15571 | Msa1450520:CDS | 30.0% | |
GCTGACCATTACAAATTAAA+GGG | + | tig0032970:15553-15572 | Msa1450520:CDS | 30.0% | |
GTAGAAACATCAGTAATCAA+TGG | + | tig0032970:15625-15644 | Msa1450520:CDS | 30.0% | |
ATGCATACTTATCACTTGAA+TGG | + | tig0032970:15697-15716 | Msa1450520:CDS | 30.0% | |
!!! | GGATATGCATTTTTTGTTGT+AGG | + | tig0032970:15718-15737 | Msa1450520:CDS | 30.0% |
!! | TTAAAAAATTGAGGGTACTG+AGG | + | tig0032970:16107-16126 | Msa1450520:intron | 30.0% |
CAGTTGGTCAAAAGAATTTA+TGG | + | tig0032970:16143-16162 | Msa1450520:intron | 30.0% | |
ATTTCATCTGCTTCAATCAA+CGG | + | tig0032970:16614-16633 | Msa1450520:CDS | 30.0% | |
! | TTGTTTAGCTTAATGTTCTG+TGG | + | tig0032970:16847-16866 | Msa1450520:three_prime_UTR | 30.0% |
GTGTCCCAAATAATTAAACT+GGG | - | tig0032970:16875-16894 | None:intergenic | 30.0% | |
AGTGTCCCAAATAATTAAAC+TGG | - | tig0032970:16876-16895 | None:intergenic | 30.0% | |
TCATGTATCAAGAATGTGAT+TGG | - | tig0032970:16937-16956 | None:intergenic | 30.0% | |
!!! | GTTTCTATTTTTGGTGAGTC+TGG | - | tig0032970:12542-12561 | None:intergenic | 35.0% |
!!! | CCCTTTTTTTAATGGAAGGT+AGG | - | tig0032970:12595-12614 | None:intergenic | 35.0% |
GTATAGTATGAACTGTCCTT+AGG | + | tig0032970:12666-12685 | Msa1450520:five_prime_UTR | 35.0% | |
!! | AAAAAAGGTGTGTTCTAGAG+TGG | - | tig0032970:12747-12766 | None:intergenic | 35.0% |
GGACTATGAAAGAAAGAAAC+TGG | - | tig0032970:12848-12867 | None:intergenic | 35.0% | |
TTGATGAGAAAGAAGAAGAG+AGG | - | tig0032970:13005-13024 | None:intergenic | 35.0% | |
GAAAGAAGAAAAACCTGTTG+GGG | - | tig0032970:13122-13141 | None:intergenic | 35.0% | |
GAGAAAGAAGAAAAACCTGT+TGG | - | tig0032970:13124-13143 | None:intergenic | 35.0% | |
GTTACATTAATAGTAGGACC+TGG | - | tig0032970:13370-13389 | None:intergenic | 35.0% | |
TGTGAATGTCCACAACAAAT+TGG | + | tig0032970:13408-13427 | Msa1450520:CDS | 35.0% | |
!!! | GGTTTTCATCCAATTTGTTG+TGG | - | tig0032970:13420-13439 | None:intergenic | 35.0% |
ATGAAAACCTCCTCATTCAT+TGG | + | tig0032970:13431-13450 | Msa1450520:CDS | 35.0% | |
AAACAACCTACCAATGAATG+AGG | - | tig0032970:13444-13463 | None:intergenic | 35.0% | |
ATTGTCCTATTCCACCAAAA+TGG | + | tig0032970:13748-13767 | Msa1450520:CDS | 35.0% | |
! | TTTCAAGTGAAGGATCAGAT+TGG | + | tig0032970:13786-13805 | Msa1450520:CDS | 35.0% |
! | CTTAATTTTCAAAGAGCAGC+TGG | + | tig0032970:13831-13850 | Msa1450520:CDS | 35.0% |
TCAAAAGGAACAGAAATGAC+GGG | - | tig0032970:13888-13907 | None:intergenic | 35.0% | |
! | TTCTGTTCCTTTTGATACTC+CGG | + | tig0032970:13893-13912 | Msa1450520:CDS | 35.0% |
!!! | GGGGACATTGTTGTTTTTAT+TGG | + | tig0032970:13918-13937 | Msa1450520:CDS | 35.0% |
!! | TGTTGTTTGAGTTGAGTTTG+TGG | + | tig0032970:13976-13995 | Msa1450520:intron | 35.0% |
!! | CTAGATGATGGAAAAGATCT+TGG | + | tig0032970:14087-14106 | Msa1450520:CDS | 35.0% |
GAACAAATTGATGTCAAACC+AGG | + | tig0032970:14189-14208 | Msa1450520:CDS | 35.0% | |
GTATACAATTTCTCTAGGCA+TGG | + | tig0032970:14435-14454 | Msa1450520:intron | 35.0% | |
ATGTTGTGCTTCTTAATGCA+TGG | + | tig0032970:14537-14556 | Msa1450520:intron | 35.0% | |
AAGGTATATGAAGACCATAG+AGG | - | tig0032970:14597-14616 | None:intergenic | 35.0% | |
CAACATTATGTACACGAAGT+CGG | - | tig0032970:14776-14795 | None:intergenic | 35.0% | |
TCTCTGCTAGAAGTAAGTTA+TGG | - | tig0032970:14833-14852 | None:intergenic | 35.0% | |
CTTGCACTATTCAAATTCCA+AGG | + | tig0032970:15025-15044 | Msa1450520:CDS | 35.0% | |
TGCACTATTCAAATTCCAAG+GGG | + | tig0032970:15027-15046 | Msa1450520:CDS | 35.0% | |
TGTCTCATTTACTTACGCTT+CGG | + | tig0032970:15170-15189 | Msa1450520:intron | 35.0% | |
!! | CACTCATTTTTGCAATTCTG+TGG | + | tig0032970:15340-15359 | Msa1450520:intron | 35.0% |
TCTGTGGTTTATTGTGTAGA+TGG | + | tig0032970:15356-15375 | Msa1450520:intron | 35.0% | |
! | GTAATCAATGGAAGCTTTAG+AGG | + | tig0032970:15637-15656 | Msa1450520:CDS | 35.0% |
!! | TGGAAGCTTTAGAGGATTTA+TGG | + | tig0032970:15645-15664 | Msa1450520:CDS | 35.0% |
CAAGTGATAAGTATGCATCT+TGG | - | tig0032970:15695-15714 | None:intergenic | 35.0% | |
AGTGTAACATCATGCAAGTA+AGG | - | tig0032970:15757-15776 | None:intergenic | 35.0% | |
AAACGCTTGAATCATGAGTT+TGG | - | tig0032970:16031-16050 | None:intergenic | 35.0% | |
! | AGGATGAAATCTAGTTCAGT+TGG | + | tig0032970:16127-16146 | Msa1450520:intron | 35.0% |
GAACAGAAAACCTTGATTCA+TGG | + | tig0032970:16373-16392 | Msa1450520:CDS | 35.0% | |
AACCTTGATTCATGGTATCT+TGG | + | tig0032970:16381-16400 | Msa1450520:CDS | 35.0% | |
TTGGTCAAGAAACATACATC+AGG | + | tig0032970:16400-16419 | Msa1450520:CDS | 35.0% | |
TGGTCAAGAAACATACATCA+GGG | + | tig0032970:16401-16420 | Msa1450520:CDS | 35.0% | |
!!! | GGTAACTCAGTTTTGTTAGT+AGG | - | tig0032970:16441-16460 | None:intergenic | 35.0% |
TTTCATCTGCTTCAATCAAC+GGG | + | tig0032970:16615-16634 | Msa1450520:CDS | 35.0% | |
! | GCTGAAGTTGTTATTCACTT+TGG | + | tig0032970:16643-16662 | Msa1450520:CDS | 35.0% |
CGCAATCAACTAATTAAGAG+AGG | - | tig0032970:16725-16744 | None:intergenic | 35.0% | |
TTAGTTGATTGCGAAGAGTT+TGG | + | tig0032970:16732-16751 | Msa1450520:three_prime_UTR | 35.0% | |
TGGCTCCCAGTTTAATTATT+TGG | + | tig0032970:16867-16886 | Msa1450520:three_prime_UTR | 35.0% | |
GGCTCCCAGTTTAATTATTT+GGG | + | tig0032970:16868-16887 | Msa1450520:three_prime_UTR | 35.0% | |
ATACATGAAACTTGCCAACA+CGG | + | tig0032970:16949-16968 | Msa1450520:three_prime_UTR | 35.0% | |
! | GATGAAAGGAAAGTATGAAG+TGG | - | tig0032970:16978-16997 | None:intergenic | 35.0% |
!!! | TCTATTTTTGGTGAGTCTGG+CGG | - | tig0032970:12539-12558 | None:intergenic | 40.0% |
!!! | AAGGGTTGTCTTTTTAGCTG+TGG | - | tig0032970:12775-12794 | None:intergenic | 40.0% |
GGTGAAGAAGCCATTGAATA+TGG | - | tig0032970:12984-13003 | None:intergenic | 40.0% | |
GCTATCAACAAACAGTTTCC+AGG | + | tig0032970:13349-13368 | Msa1450520:CDS | 40.0% | |
!! | CACAGCAACATTGTTGTTTG+TGG | - | tig0032970:13392-13411 | None:intergenic | 40.0% |
AAACCTCCTCATTCATTGGT+AGG | + | tig0032970:13435-13454 | Msa1450520:intron | 40.0% | |
! | ATTGGTGGTTGAAATAGGTC+TGG | + | tig0032970:13678-13697 | Msa1450520:intron | 40.0% |
! | TTGGTGGTTGAAATAGGTCT+GGG | + | tig0032970:13679-13698 | Msa1450520:intron | 40.0% |
!! | CAGTTCCATTTTGGTGGAAT+AGG | - | tig0032970:13756-13775 | None:intergenic | 40.0% |
CTATTCCACCAAAATGGAAC+TGG | + | tig0032970:13754-13773 | Msa1450520:CDS | 40.0% | |
! | TAAGTCCAGTTCCATTTTGG+TGG | - | tig0032970:13762-13781 | None:intergenic | 40.0% |
! | TGGTAAGTCCAGTTCCATTT+TGG | - | tig0032970:13765-13784 | None:intergenic | 40.0% |
! | GACTTACCAGTTTCAAGTGA+AGG | + | tig0032970:13776-13795 | Msa1450520:CDS | 40.0% |
TCTGATCCTTCACTTGAAAC+TGG | - | tig0032970:13785-13804 | None:intergenic | 40.0% | |
! | AATTTTCAAAGAGCAGCTGG+TGG | + | tig0032970:13834-13853 | Msa1450520:CDS | 40.0% |
! | TTCCTTTTGATACTCCGGAA+GGG | + | tig0032970:13898-13917 | Msa1450520:CDS | 40.0% |
AAAACAACAATGTCCCCTTC+CGG | - | tig0032970:13915-13934 | None:intergenic | 40.0% | |
!! | TTGAGAAAGGCTCTAGATGA+TGG | + | tig0032970:14075-14094 | Msa1450520:CDS | 40.0% |
AAAGATCTTGGAATGCCAGA+TGG | + | tig0032970:14099-14118 | Msa1450520:CDS | 40.0% | |
CAGATGGTGTTCTCATCAAT+GGG | + | tig0032970:14115-14134 | Msa1450520:CDS | 40.0% | |
! | GCACTCAAAGTTTTCCTCTA+TGG | + | tig0032970:14580-14599 | Msa1450520:intron | 40.0% |
CGACTTCGTGTACATAATGT+TGG | + | tig0032970:14774-14793 | Msa1450520:CDS | 40.0% | |
TTACTTCTAGCAGAGACTGA+AGG | + | tig0032970:14837-14856 | Msa1450520:CDS | 40.0% | |
TGAACTTGCATTCTGATCCA+TGG | - | tig0032970:14934-14953 | None:intergenic | 40.0% | |
ACGTGATTCATTCACAAACC+TGG | - | tig0032970:14979-14998 | None:intergenic | 40.0% | |
GGTTTGTGAATGAATCACGT+TGG | + | tig0032970:14979-14998 | Msa1450520:CDS | 40.0% | |
TCAAATTGATCATCTGGACC+CGG | - | tig0032970:15074-15093 | None:intergenic | 40.0% | |
TGAACCAAGCAAGATCTATC+AGG | + | tig0032970:15108-15127 | Msa1450520:CDS | 40.0% | |
CTGAAAGATCCTTGTGGATT+TGG | - | tig0032970:15406-15425 | None:intergenic | 40.0% | |
CCATATCTGAAAGATCCTTG+TGG | - | tig0032970:15412-15431 | None:intergenic | 40.0% | |
CCACAAGGATCTTTCAGATA+TGG | + | tig0032970:15409-15428 | Msa1450520:CDS | 40.0% | |
GTAAATCTCTGTCACGTTGA+TGG | - | tig0032970:15437-15456 | None:intergenic | 40.0% | |
AAACCACCAGTGAAAATCGA+TGG | + | tig0032970:15469-15488 | Msa1450520:CDS | 40.0% | |
AACCACCAGTGAAAATCGAT+GGG | + | tig0032970:15470-15489 | Msa1450520:CDS | 40.0% | |
! | ATTACTGATGTTTCTACCCG+AGG | - | tig0032970:15622-15641 | None:intergenic | 40.0% |
!!! | CAAGTTTTGAGTGTTGCTGA+CGG | - | tig0032970:15794-15813 | None:intergenic | 40.0% |
! | AAACTTGATCCATTGACTGC+AGG | + | tig0032970:15807-15826 | Msa1450520:intron | 40.0% |
!! | AGATTGGTCTGAGAATAGCA+GGG | + | tig0032970:15841-15860 | Msa1450520:CDS | 40.0% |
! | CAGGGGTACATATAACAAGT+GGG | + | tig0032970:15859-15878 | Msa1450520:CDS | 40.0% |
GGTACATATAACAAGTGGGA+TGG | + | tig0032970:15863-15882 | Msa1450520:CDS | 40.0% | |
TAAACCTAAACAGACGGCAA+GGG | - | tig0032970:16294-16313 | None:intergenic | 40.0% | |
ATAAACCTAAACAGACGGCA+AGG | - | tig0032970:16295-16314 | None:intergenic | 40.0% | |
CCAGGATAAACCTAAACAGA+CGG | - | tig0032970:16300-16319 | None:intergenic | 40.0% | |
! | TTTAGGTTTATCCTGGAGCA+TGG | + | tig0032970:16304-16323 | Msa1450520:intron | 40.0% |
GACCAAGATACCATGAATCA+AGG | - | tig0032970:16386-16405 | None:intergenic | 40.0% | |
!!! | TCAGTTTTGTTAGTAGGCTC+CGG | - | tig0032970:16435-16454 | None:intergenic | 40.0% |
CTGAAGTCTGCCACATTTAA+GGG | - | tig0032970:16478-16497 | None:intergenic | 40.0% | |
CTTCAAATGGTGACAGCCTA+AGG | - | tig0032970:12685-12704 | None:intergenic | 45.0% | |
ATTGGAGAAGTGGTGTGGAA+GGG | - | tig0032970:12793-12812 | None:intergenic | 45.0% | |
AGAGAGAGAGATTGGAGAAG+TGG | - | tig0032970:12803-12822 | None:intergenic | 45.0% | |
AGAGAGAGAGAGAGAGAGAT+TGG | - | tig0032970:12811-12830 | None:intergenic | 45.0% | |
! | CAGCTGAAGAGAGTGTAAGA+AGG | - | tig0032970:13037-13056 | None:intergenic | 45.0% |
TACATCACTGCTTCTCCTCT+TGG | + | tig0032970:13092-13111 | Msa1450520:CDS | 45.0% | |
CAACCTACCAATGAATGAGG+AGG | - | tig0032970:13441-13460 | None:intergenic | 45.0% | |
GCATGGACACTCCTCATATT+AGG | + | tig0032970:13526-13545 | Msa1450520:intron | 45.0% | |
GACGTTATGAAGCACGGATA+CGG | - | tig0032970:13588-13607 | None:intergenic | 45.0% | |
TGGTGGTTGAAATAGGTCTG+GGG | + | tig0032970:13680-13699 | Msa1450520:intron | 45.0% | |
TTCAGCAAAGGAGGAGTTCA+TGG | + | tig0032970:13703-13722 | Msa1450520:CDS | 45.0% | |
TCATGGCAAGATGGTGTTCT+TGG | + | tig0032970:13720-13739 | Msa1450520:CDS | 45.0% | |
!! | AAGGAACAGAAATGACGGGT+CGG | - | tig0032970:13884-13903 | None:intergenic | 45.0% |
! | GTTCCTTTTGATACTCCGGA+AGG | + | tig0032970:13897-13916 | Msa1450520:CDS | 45.0% |
! | TCCTTTTGATACTCCGGAAG+GGG | + | tig0032970:13899-13918 | Msa1450520:CDS | 45.0% |
TTGGTACACACGCAATCACA+CGG | + | tig0032970:13944-13963 | Msa1450520:CDS | 45.0% | |
CCATTGATGAGAACACCATC+TGG | - | tig0032970:14117-14136 | None:intergenic | 45.0% | |
CCAGATGGTGTTCTCATCAA+TGG | + | tig0032970:14114-14133 | Msa1450520:CDS | 45.0% | |
GGTGTTCTCATCAATGGGAA+AGG | + | tig0032970:14120-14139 | Msa1450520:CDS | 45.0% | |
AATTCCAAGGGGAAAGCAAG+AGG | + | tig0032970:15038-15057 | Msa1450520:CDS | 45.0% | |
AGCAAGAGGTCATTTACCAC+CGG | + | tig0032970:15052-15071 | Msa1450520:CDS | 45.0% | |
GAGACCTGATAGATCTTGCT+TGG | - | tig0032970:15115-15134 | None:intergenic | 45.0% | |
AGATGGAACGTATCAGCAAG+TGG | + | tig0032970:15373-15392 | Msa1450520:intron | 45.0% | |
!!! | TTCCCATCGATTTTCACTGG+TGG | - | tig0032970:15475-15494 | None:intergenic | 45.0% |
CAGTGAAAATCGATGGGAAG+CGG | + | tig0032970:15476-15495 | Msa1450520:CDS | 45.0% | |
TAATGGTCAGCAAGCCTGAT+TGG | - | tig0032970:15544-15563 | None:intergenic | 45.0% | |
! | TTGATCCATTGACTGCAGGA+TGG | + | tig0032970:15811-15830 | Msa1450520:intron | 45.0% |
! | ATTGACTGCAGGATGGACTT+CGG | + | tig0032970:15818-15837 | Msa1450520:intron | 45.0% |
!! | GAGATTGGTCTGAGAATAGC+AGG | + | tig0032970:15840-15859 | Msa1450520:CDS | 45.0% |
!! | GATTGGTCTGAGAATAGCAG+GGG | + | tig0032970:15842-15861 | Msa1450520:CDS | 45.0% |
! | GCAGGGGTACATATAACAAG+TGG | + | tig0032970:15858-15877 | Msa1450520:CDS | 45.0% |
!! | GCTCGCTTGTTGTAAAAGAG+TGG | - | tig0032970:15986-16005 | None:intergenic | 45.0% |
! | CCGTCTGTTTAGGTTTATCC+TGG | + | tig0032970:16297-16316 | Msa1450520:intron | 45.0% |
CCAAACTCCAACATTGTCGA+GGG | - | tig0032970:16346-16365 | None:intergenic | 45.0% | |
TCCAAACTCCAACATTGTCG+AGG | - | tig0032970:16347-16366 | None:intergenic | 45.0% | |
ATACATCAGGGTTGTCAACC+CGG | + | tig0032970:16413-16432 | Msa1450520:CDS | 45.0% | |
!!! | CAGTTTTGTTAGTAGGCTCC+GGG | - | tig0032970:16434-16453 | None:intergenic | 45.0% |
!! | TTAAGGGCATTGTCTGGCAT+CGG | - | tig0032970:16462-16481 | None:intergenic | 45.0% |
!! | CCACATTTAAGGGCATTGTC+TGG | - | tig0032970:16468-16487 | None:intergenic | 45.0% |
CCAGACAATGCCCTTAAATG+TGG | + | tig0032970:16465-16484 | Msa1450520:CDS | 45.0% | |
GCTGAAGTCTGCCACATTTA+AGG | - | tig0032970:16479-16498 | None:intergenic | 45.0% | |
TCTGCTTCAATCAACGGGAA+TGG | + | tig0032970:16620-16639 | Msa1450520:CDS | 45.0% | |
CTGCTTCAATCAACGGGAAT+GGG | + | tig0032970:16621-16640 | Msa1450520:CDS | 45.0% | |
!! | TTGCGAAGAGTTTGGCTTGT+TGG | + | tig0032970:16740-16759 | Msa1450520:three_prime_UTR | 45.0% |
!! | TGGCTTGTTGGTGAGATTTG+TGG | + | tig0032970:16752-16771 | Msa1450520:three_prime_UTR | 45.0% |
GTATGAAGTGGAAACCGTGT+TGG | - | tig0032970:16966-16985 | None:intergenic | 45.0% | |
!!! | TAAAAGTTTATTTTTTTTAT+TGG | + | tig0032970:13660-13679 | Msa1450520:intron | 5.0% |
TAGAGTGGACACTGGATGGA+TGG | - | tig0032970:12732-12751 | None:intergenic | 50.0% | |
!! | GTTCTAGAGTGGACACTGGA+TGG | - | tig0032970:12736-12755 | None:intergenic | 50.0% |
!! | GTGTGTTCTAGAGTGGACAC+TGG | - | tig0032970:12740-12759 | None:intergenic | 50.0% |
GATTGGAGAAGTGGTGTGGA+AGG | - | tig0032970:12794-12813 | None:intergenic | 50.0% | |
GAGAGATTGGAGAAGTGGTG+TGG | - | tig0032970:12798-12817 | None:intergenic | 50.0% | |
TCCTCATATTAGGCGTGTCC+CGG | + | tig0032970:13536-13555 | Msa1450520:intron | 50.0% | |
ATGAAGCACGGATACGGACA+CGG | - | tig0032970:13582-13601 | None:intergenic | 50.0% | |
! | ATAGGTCTGGGGTTCAGCAA+AGG | + | tig0032970:13691-13710 | Msa1450520:intron | 50.0% |
AGGAGGAGTTCATGGCAAGA+TGG | + | tig0032970:13711-13730 | Msa1450520:CDS | 50.0% | |
!! | CAAAGAGCAGCTGGTGGATT+TGG | + | tig0032970:13840-13859 | Msa1450520:CDS | 50.0% |
! | TCCCCTTCCGGAGTATCAAA+AGG | - | tig0032970:13903-13922 | None:intergenic | 50.0% |
ACTACATTGTCGCAAGTGCC+AGG | + | tig0032970:14958-14977 | Msa1450520:CDS | 50.0% | |
TCACGTTGGCAACGAGTTAC+TGG | + | tig0032970:14993-15012 | Msa1450520:CDS | 50.0% | |
TGGCAACGAGTTACTGGAGT+TGG | + | tig0032970:14999-15018 | Msa1450520:CDS | 50.0% | |
ATGACCTCTTGCTTTCCCCT+TGG | - | tig0032970:15045-15064 | None:intergenic | 50.0% | |
GCAAGAGGTCATTTACCACC+GGG | + | tig0032970:15053-15072 | Msa1450520:CDS | 50.0% | |
AATTGATCATCTGGACCCGG+TGG | - | tig0032970:15071-15090 | None:intergenic | 50.0% | |
!!! | CGCTTCCCATCGATTTTCAC+TGG | - | tig0032970:15478-15497 | None:intergenic | 50.0% |
AAGCGGAGAGCAACACTTAG+TGG | + | tig0032970:15493-15512 | Msa1450520:CDS | 50.0% | |
TTTCCCACGAAGCCTCTAAC+CGG | + | tig0032970:15592-15611 | Msa1450520:CDS | 50.0% | |
! | ACTGATGTTTCTACCCGAGG+AGG | - | tig0032970:15619-15638 | None:intergenic | 50.0% |
GAAGTCCATCCTGCAGTCAA+TGG | - | tig0032970:15819-15838 | None:intergenic | 50.0% | |
AATAGCTCGTACTACAGCGC+AGG | + | tig0032970:15886-15905 | Msa1450520:CDS | 50.0% | |
GATTCCCTTGCCGTCTGTTT+AGG | + | tig0032970:16287-16306 | Msa1450520:intron | 50.0% | |
AAAACTGCTGTCCATGCTCC+AGG | - | tig0032970:16318-16337 | None:intergenic | 50.0% | |
! | TGGAGCATGGACAGCAGTTT+TGG | + | tig0032970:16317-16336 | Msa1450520:CDS | 50.0% |
TTGGTCTCCCTCGACAATGT+TGG | + | tig0032970:16336-16355 | Msa1450520:CDS | 50.0% | |
CCCTCGACAATGTTGGAGTT+TGG | + | tig0032970:16343-16362 | Msa1450520:CDS | 50.0% | |
! | TCCTCTTGGAGTACCCCAAC+AGG | + | tig0032970:13106-13125 | Msa1450520:CDS | 55.0% |
! | ACCTGTTGGGGTACTCCAAG+AGG | - | tig0032970:13110-13129 | None:intergenic | 55.0% |
ACCGGGACACGCCTAATATG+AGG | - | tig0032970:13540-13559 | None:intergenic | 55.0% | |
TATTAGGCGTGTCCCGGTGT+CGG | + | tig0032970:13542-13561 | Msa1450520:intron | 55.0% | |
!! | AGAGCAGCTGGTGGATTTGG+TGG | + | tig0032970:13843-13862 | Msa1450520:CDS | 55.0% |
GGTGCTCGTCCAAATCCACA+AGG | + | tig0032970:15394-15413 | Msa1450520:CDS | 55.0% | |
CCTGATTGGAGTGGCAGGAT+TGG | - | tig0032970:15530-15549 | None:intergenic | 55.0% | |
CCAATCCTGCCACTCCAATC+AGG | + | tig0032970:15527-15546 | Msa1450520:CDS | 55.0% | |
GTCAGCAAGCCTGATTGGAG+TGG | - | tig0032970:15539-15558 | None:intergenic | 55.0% | |
! | TGTTTCTACCCGAGGAGGTC+CGG | - | tig0032970:15614-15633 | None:intergenic | 55.0% |
! | GCAGGATGGACTTCGGAGAT+TGG | + | tig0032970:15825-15844 | Msa1450520:intron | 55.0% |
ACTGACGTGTCTCCGACACC+GGG | - | tig0032970:13557-13576 | None:intergenic | 60.0% | |
CACTGACGTGTCTCCGACAC+CGG | - | tig0032970:13558-13577 | None:intergenic | 60.0% | |
! | GGTCTGGGGTTCAGCAAAGG+AGG | + | tig0032970:13694-13713 | Msa1450520:intron | 60.0% |
GCAAGCCTGATTGGAGTGGC+AGG | - | tig0032970:15535-15554 | None:intergenic | 60.0% | |
GGTCCGGTTAGAGGCTTCGT+GGG | - | tig0032970:15598-15617 | None:intergenic | 60.0% | |
AGGTCCGGTTAGAGGCTTCG+TGG | - | tig0032970:15599-15618 | None:intergenic | 60.0% | |
AGCCTCTAACCGGACCTCCT+CGG | + | tig0032970:15602-15621 | Msa1450520:CDS | 60.0% | |
GCCTCTAACCGGACCTCCTC+GGG | + | tig0032970:15603-15622 | Msa1450520:CDS | 65.0% | |
ACCCGAGGAGGTCCGGTTAG+AGG | - | tig0032970:15607-15626 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0032970 | gene | 12535 | 17025 | 12535 | ID=Msa1450520;Name=Msa1450520 |
tig0032970 | mRNA | 12535 | 17025 | 12535 | ID=Msa1450520-mRNA-1;Parent=Msa1450520;Name=Msa1450520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=455|1|1|1|1|1|9|322|590 |
tig0032970 | exon | 12535 | 13127 | 12535 | ID=Msa1450520-mRNA-1:exon:17497;Parent=Msa1450520-mRNA-1 |
tig0032970 | exon | 13343 | 13452 | 13343 | ID=Msa1450520-mRNA-1:exon:17498;Parent=Msa1450520-mRNA-1 |
tig0032970 | exon | 13695 | 13965 | 13695 | ID=Msa1450520-mRNA-1:exon:17499;Parent=Msa1450520-mRNA-1 |
tig0032970 | exon | 14072 | 14210 | 14072 | ID=Msa1450520-mRNA-1:exon:17500;Parent=Msa1450520-mRNA-1 |
tig0032970 | exon | 14763 | 15129 | 14763 | ID=Msa1450520-mRNA-1:exon:17501;Parent=Msa1450520-mRNA-1 |
tig0032970 | exon | 15375 | 15740 | 15375 | ID=Msa1450520-mRNA-1:exon:17502;Parent=Msa1450520-mRNA-1 |
tig0032970 | exon | 15829 | 15907 | 15829 | ID=Msa1450520-mRNA-1:exon:17503;Parent=Msa1450520-mRNA-1 |
tig0032970 | exon | 16309 | 16508 | 16309 | ID=Msa1450520-mRNA-1:exon:17504;Parent=Msa1450520-mRNA-1 |
tig0032970 | exon | 16601 | 17025 | 16601 | ID=Msa1450520-mRNA-1:exon:17505;Parent=Msa1450520-mRNA-1 |
tig0032970 | five_prime_UTR | 12535 | 12989 | 12535 | ID=Msa1450520-mRNA-1:five_prime_utr;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 12990 | 13127 | 12990 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 13343 | 13452 | 13343 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 13695 | 13965 | 13695 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 14072 | 14210 | 14072 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 14763 | 15129 | 14763 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 15375 | 15740 | 15375 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 15829 | 15907 | 15829 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 16309 | 16508 | 16309 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | CDS | 16601 | 16703 | 16601 | ID=Msa1450520-mRNA-1:cds;Parent=Msa1450520-mRNA-1 |
tig0032970 | three_prime_UTR | 16704 | 17025 | 16704 | ID=Msa1450520-mRNA-1:three_prime_utr;Parent=Msa1450520-mRNA-1 |
Gene Sequence |
Protein sequence |