Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041610 | XP_013450328.1 | 100.000 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 0.0 | 897 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041610 | sp|Q8LFS6|BRN1L_ARATH | 69.213 | 432 | 105 | 10 | 15 | 433 | 17 | 433 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041610 | A0A072U4V5 | 100.000 | 434 | 0 | 0 | 1 | 434 | 1 | 434 | 0.0 | 897 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0647320 | Msa1041610 | 0.834424 | 3.020794e-56 | -8.615850e-47 |
| Msa1041610 | Msa1166510 | 0.972585 | 5.237560e-135 | -8.615850e-47 |
| Msa1041610 | Msa1357780 | 0.837194 | 6.002657e-57 | -8.615850e-47 |
| Msa0242820 | Msa1041610 | 0.807890 | 4.052158e-50 | -8.615850e-47 |
| Msa0287640 | Msa1041610 | 0.822617 | 2.152591e-53 | -8.615850e-47 |
| Msa0287660 | Msa1041610 | 0.804505 | 2.092219e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041610 | MtrunA17_Chr7g0268551 | 99.770 | 434 | 0 | 1 | 1 | 434 | 1 | 433 | 0.0 | 891 |
| Msa1041610 | MtrunA17_Chr4g0068631 | 48.315 | 178 | 88 | 2 | 16 | 190 | 88 | 264 | 1.96e-50 | 181 |
| Msa1041610 | MtrunA17_Chr7g0270201 | 32.984 | 191 | 105 | 3 | 16 | 189 | 74 | 258 | 7.23e-28 | 115 |
| Msa1041610 | MtrunA17_Chr4g0044541 | 28.374 | 289 | 173 | 11 | 1 | 270 | 198 | 471 | 6.50e-16 | 80.1 |
| Msa1041610 | MtrunA17_Chr3g0110211 | 26.016 | 246 | 161 | 8 | 6 | 245 | 16 | 246 | 1.23e-14 | 75.1 |
| Msa1041610 | MtrunA17_Chr1g0201151 | 26.542 | 373 | 204 | 18 | 5 | 320 | 197 | 556 | 2.24e-13 | 72.0 |
| Msa1041610 | MtrunA17_Chr3g0121631 | 40.000 | 80 | 47 | 1 | 351 | 430 | 38 | 116 | 5.14e-13 | 66.2 |
| Msa1041610 | MtrunA17_Chr5g0447761 | 26.163 | 172 | 109 | 4 | 14 | 168 | 4 | 174 | 1.27e-12 | 69.3 |
| Msa1041610 | MtrunA17_Chr3g0133651 | 24.138 | 261 | 157 | 8 | 4 | 247 | 175 | 411 | 1.71e-12 | 68.9 |
| Msa1041610 | MtrunA17_Chr4g0050781 | 39.189 | 74 | 45 | 0 | 351 | 424 | 9 | 82 | 2.71e-12 | 65.9 |
| Msa1041610 | MtrunA17_Chr2g0278661 | 40.541 | 74 | 44 | 0 | 350 | 423 | 8 | 81 | 2.96e-12 | 66.2 |
| Msa1041610 | MtrunA17_Chr2g0290191 | 22.997 | 287 | 167 | 7 | 17 | 275 | 5 | 265 | 6.69e-12 | 67.4 |
| Msa1041610 | MtrunA17_Chr0c09g0493511 | 24.898 | 245 | 160 | 7 | 18 | 243 | 120 | 359 | 1.63e-11 | 66.2 |
| Msa1041610 | MtrunA17_Chr3g0120721 | 25.146 | 171 | 109 | 4 | 17 | 178 | 19 | 179 | 2.11e-11 | 65.1 |
| Msa1041610 | MtrunA17_Chr3g0086861 | 37.037 | 81 | 51 | 0 | 347 | 427 | 42 | 122 | 2.18e-11 | 65.5 |
| Msa1041610 | MtrunA17_Chr4g0018581 | 35.514 | 107 | 69 | 0 | 317 | 423 | 419 | 525 | 3.33e-11 | 65.5 |
| Msa1041610 | MtrunA17_Chr7g0276201 | 26.316 | 171 | 113 | 5 | 17 | 184 | 105 | 265 | 3.56e-11 | 65.1 |
| Msa1041610 | MtrunA17_Chr4g0061451 | 35.897 | 78 | 50 | 0 | 347 | 424 | 40 | 117 | 3.83e-11 | 63.5 |
| Msa1041610 | MtrunA17_Chr1g0153181 | 28.000 | 275 | 162 | 11 | 7 | 263 | 207 | 463 | 4.38e-11 | 65.1 |
| Msa1041610 | MtrunA17_Chr3g0101061 | 25.071 | 351 | 221 | 13 | 17 | 341 | 41 | 375 | 4.70e-11 | 64.7 |
| Msa1041610 | MtrunA17_Chr3g0135111 | 24.339 | 189 | 120 | 3 | 12 | 177 | 6 | 194 | 5.80e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041610 | AT4G03110.1 | 69.213 | 432 | 105 | 10 | 15 | 433 | 17 | 433 | 0.0 | 570 |
| Msa1041610 | AT1G03457.1 | 66.355 | 428 | 117 | 10 | 7 | 428 | 3 | 409 | 0.0 | 551 |
| Msa1041610 | AT1G03457.2 | 64.989 | 437 | 117 | 11 | 7 | 428 | 3 | 418 | 0.0 | 543 |
| Msa1041610 | AT4G03110.2 | 68.434 | 396 | 98 | 9 | 15 | 398 | 17 | 397 | 0.0 | 521 |
| Msa1041610 | AT4G03110.3 | 68.514 | 397 | 97 | 10 | 15 | 398 | 17 | 398 | 0.0 | 519 |
| Msa1041610 | AT1G03457.3 | 62.769 | 325 | 94 | 10 | 110 | 428 | 1 | 304 | 2.71e-128 | 374 |
| Msa1041610 | AT4G16280.3 | 43.716 | 183 | 99 | 2 | 10 | 189 | 114 | 295 | 6.05e-48 | 172 |
| Msa1041610 | AT4G16280.4 | 43.716 | 183 | 99 | 2 | 10 | 189 | 39 | 220 | 4.78e-47 | 172 |
| Msa1041610 | AT4G16280.2 | 43.716 | 183 | 99 | 2 | 10 | 189 | 114 | 295 | 7.03e-47 | 172 |
| Msa1041610 | AT2G47310.1 | 32.967 | 182 | 112 | 2 | 17 | 189 | 111 | 291 | 6.31e-26 | 110 |
| Msa1041610 | AT4G34110.1 | 27.698 | 278 | 167 | 11 | 5 | 263 | 204 | 466 | 4.11e-15 | 78.2 |
| Msa1041610 | AT4G00830.4 | 26.901 | 171 | 112 | 5 | 17 | 184 | 117 | 277 | 3.98e-14 | 74.7 |
| Msa1041610 | AT4G00830.2 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 5.07e-14 | 74.3 |
| Msa1041610 | AT4G00830.1 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 5.07e-14 | 74.3 |
| Msa1041610 | AT4G00830.6 | 27.485 | 171 | 111 | 5 | 17 | 184 | 117 | 277 | 5.07e-14 | 74.3 |
| Msa1041610 | AT5G47620.1 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 6.38e-14 | 73.6 |
| Msa1041610 | AT5G47620.2 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 6.38e-14 | 73.6 |
| Msa1041610 | AT5G47620.5 | 25.984 | 254 | 159 | 9 | 14 | 253 | 4 | 242 | 6.38e-14 | 73.6 |
| Msa1041610 | AT2G18510.1 | 26.316 | 228 | 155 | 7 | 6 | 227 | 16 | 236 | 3.25e-13 | 71.2 |
| Msa1041610 | AT1G71770.1 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 3.88e-13 | 72.0 |
| Msa1041610 | AT1G71770.2 | 26.882 | 279 | 150 | 11 | 18 | 250 | 241 | 511 | 3.88e-13 | 72.0 |
| Msa1041610 | AT3G07810.2 | 26.316 | 171 | 106 | 4 | 17 | 168 | 7 | 176 | 9.60e-13 | 70.5 |
| Msa1041610 | AT3G07810.1 | 26.316 | 171 | 106 | 4 | 17 | 168 | 7 | 176 | 1.27e-12 | 70.1 |
| Msa1041610 | AT4G00830.3 | 29.586 | 169 | 102 | 5 | 17 | 184 | 117 | 269 | 1.53e-12 | 69.7 |
| Msa1041610 | AT4G00830.5 | 29.586 | 169 | 102 | 5 | 17 | 184 | 117 | 269 | 1.53e-12 | 69.7 |
| Msa1041610 | AT4G13850.2 | 42.169 | 83 | 47 | 1 | 351 | 433 | 37 | 118 | 1.80e-12 | 65.5 |
| Msa1041610 | AT4G13850.1 | 42.169 | 83 | 47 | 1 | 351 | 433 | 37 | 118 | 2.00e-12 | 65.5 |
| Msa1041610 | AT4G13850.3 | 42.169 | 83 | 47 | 1 | 351 | 433 | 37 | 118 | 1.01e-11 | 63.2 |
| Msa1041610 | AT1G22760.1 | 42.857 | 77 | 43 | 1 | 346 | 422 | 226 | 301 | 1.52e-11 | 67.0 |
| Msa1041610 | AT3G13224.2 | 21.698 | 212 | 131 | 4 | 17 | 220 | 20 | 204 | 1.73e-11 | 65.9 |
| Msa1041610 | AT4G13850.4 | 42.857 | 77 | 44 | 0 | 351 | 427 | 37 | 113 | 1.83e-11 | 62.0 |
| Msa1041610 | AT2G23350.1 | 26.667 | 345 | 207 | 17 | 1 | 324 | 210 | 529 | 2.25e-11 | 66.2 |
| Msa1041610 | AT5G50250.1 | 24.324 | 185 | 123 | 4 | 14 | 187 | 111 | 289 | 6.24e-11 | 63.5 |
| Msa1041610 | AT5G40490.1 | 26.316 | 171 | 107 | 4 | 17 | 178 | 43 | 203 | 6.34e-11 | 64.3 |
| Msa1041610 | AT5G51300.1 | 40.000 | 75 | 45 | 0 | 349 | 423 | 480 | 554 | 7.15e-11 | 64.7 |
| Msa1041610 | AT5G51300.2 | 40.000 | 75 | 45 | 0 | 349 | 423 | 480 | 554 | 7.15e-11 | 64.7 |
| Msa1041610 | AT5G51300.3 | 40.000 | 75 | 45 | 0 | 349 | 423 | 480 | 554 | 7.15e-11 | 64.7 |
| Msa1041610 | AT3G13224.3 | 21.698 | 212 | 131 | 4 | 17 | 220 | 11 | 195 | 8.78e-11 | 63.5 |
| Msa1041610 | AT1G01080.1 | 33.721 | 86 | 57 | 0 | 346 | 431 | 105 | 190 | 8.90e-11 | 63.2 |
Find 128 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAGCATCCTTCATTATT+TGG | 0.145202 | 7_1:+79183629 | Msa1041610:CDS |
| CTTTCTCTTTCTCTCTCTTT+TGG | 0.165519 | 7_1:-79180263 | None:intergenic |
| ACGATGAATTATGGCGAATT+TGG | 0.213680 | 7_1:-79180240 | None:intergenic |
| TCTTTCTTCTTTCTGAGATT+TGG | 0.230145 | 7_1:-79180334 | None:intergenic |
| TTAATTTCTTACCTCCTAAT+TGG | 0.238990 | 7_1:-79184953 | None:intergenic |
| TTTCTTTACACGAAACTTCT+TGG | 0.252350 | 7_1:+79180380 | Msa1041610:five_prime_UTR |
| TATCACATACCTCAAGAATT+TGG | 0.267175 | 7_1:+79184695 | Msa1041610:CDS |
| CCTGGTTCTGTTTCACCTTC+CGG | 0.267526 | 7_1:+79184136 | Msa1041610:CDS |
| CTTCTTGGACTCGACATTAA+TGG | 0.267985 | 7_1:+79180395 | Msa1041610:exon |
| ATAGCAGATTGAGCAGCTTC+TGG | 0.275678 | 7_1:-79184912 | None:intergenic |
| TCAACTTCAGAAATGTTCTT+TGG | 0.277981 | 7_1:-79182040 | None:intergenic |
| CTGTGCTTTCTGAGCTCTTC+GGG | 0.289780 | 7_1:-79183579 | None:intergenic |
| CTCCAAGTATGGAACTATAA+AGG | 0.292179 | 7_1:+79182078 | Msa1041610:CDS |
| AGAACAAGCTCTTGCTGCTT+TGG | 0.295520 | 7_1:+79182274 | Msa1041610:CDS |
| ACACGCATTAACGGCCTTAT+CGG | 0.303507 | 7_1:-79180730 | None:intergenic |
| ATTAGGAGGTAAGAAATTAA+AGG | 0.309794 | 7_1:+79184956 | Msa1041610:CDS |
| GGCTCTTATCCTGCTGTGCC+AGG | 0.318239 | 7_1:+79184052 | Msa1041610:CDS |
| TAGTTTCTAGGATTCATATT+GGG | 0.327152 | 7_1:-79184004 | None:intergenic |
| ATGATGAATGGATGCCAATT+AGG | 0.329590 | 7_1:+79184939 | Msa1041610:CDS |
| GGCAACTCCGCTACATCATC+AGG | 0.339581 | 7_1:+79184166 | Msa1041610:CDS |
| AGCAGCAAGAGCTTGTTCTT+TGG | 0.340647 | 7_1:-79182270 | None:intergenic |
| TGTTCATCAGTAAGGTTTAC+CGG | 0.346110 | 7_1:-79185003 | None:intergenic |
| GTTCCTCCATATAACGGTTA+TGG | 0.352351 | 7_1:+79183671 | Msa1041610:CDS |
| TGATAGGCTCCTGGAAGTTA+TGG | 0.362020 | 7_1:+79183878 | Msa1041610:intron |
| TGATAGCCATAACCGTTATA+TGG | 0.365595 | 7_1:-79183677 | None:intergenic |
| ACCGGTGTTAGCAAATGTTT+TGG | 0.367022 | 7_1:+79184791 | Msa1041610:CDS |
| GGAGGCACATGATAGTTTCT+AGG | 0.370299 | 7_1:-79184016 | None:intergenic |
| ATATAACGGTTATGGCTATC+AGG | 0.373888 | 7_1:+79183679 | Msa1041610:CDS |
| GTTTCACCTTCCGGTGGAAA+TGG | 0.379419 | 7_1:+79184145 | Msa1041610:CDS |
| TTCATATTGGGGCCGAGATC+TGG | 0.379609 | 7_1:-79183992 | None:intergenic |
| GCTAATGCCTTTCAACCATT+TGG | 0.382505 | 7_1:+79184731 | Msa1041610:CDS |
| CTTATTGTGACACGCATTAA+CGG | 0.390856 | 7_1:-79180739 | None:intergenic |
| ATCCTTTATAGTTCCATACT+TGG | 0.391509 | 7_1:-79182080 | None:intergenic |
| ACTGTGCTTTCTGAGCTCTT+CGG | 0.392609 | 7_1:-79183580 | None:intergenic |
| TCATCTTCCGTCATGTGTTT+CGG | 0.395974 | 7_1:-79180483 | None:intergenic |
| TCAGAACACAAACTCTTCAT+TGG | 0.399593 | 7_1:+79182010 | Msa1041610:intron |
| ATTGTTTGTGTTCATCAGTA+AGG | 0.400663 | 7_1:-79185011 | None:intergenic |
| GTGTTCCCTTAGTTGTCAAA+TGG | 0.401234 | 7_1:+79183531 | Msa1041610:CDS |
| ATAGTTTCTAGGATTCATAT+TGG | 0.403096 | 7_1:-79184005 | None:intergenic |
| CAATAGAGATAGACATTATG+AGG | 0.404908 | 7_1:-79185147 | None:intergenic |
| AATCAATGGAAAGCACAAAA+TGG | 0.410828 | 7_1:+79182301 | Msa1041610:CDS |
| GATAGGCTCCTGGAAGTTAT+GGG | 0.413886 | 7_1:+79183879 | Msa1041610:intron |
| TAAGAGCCAACATAACTTGC+AGG | 0.416204 | 7_1:-79184037 | None:intergenic |
| TCACAATAAGAAAACATTAC+CGG | 0.421330 | 7_1:+79180752 | Msa1041610:CDS |
| GGCATGAGCCCATAACTTCC+AGG | 0.430186 | 7_1:-79183887 | None:intergenic |
| TAGCAGATTGAGCAGCTTCT+GGG | 0.433513 | 7_1:-79184911 | None:intergenic |
| ATTATTTGGAGCCATGCCTA+TGG | 0.433566 | 7_1:+79183643 | Msa1041610:CDS |
| ACAAGCTCTTGCTGCTTTGG+AGG | 0.434947 | 7_1:+79182277 | Msa1041610:CDS |
| AATTAAAGGTTCAGCATAAG+AGG | 0.436395 | 7_1:+79184970 | Msa1041610:CDS |
| CCAGGTTGATTCTGCATTGG+TGG | 0.451380 | 7_1:-79183923 | None:intergenic |
| TTATCGGCTTCATCTCTAGA+AGG | 0.468242 | 7_1:-79180714 | None:intergenic |
| ATCAGCCCATTTGACAACTA+AGG | 0.471151 | 7_1:-79183537 | None:intergenic |
| TGTTGTAACCCTGGCACAGC+AGG | 0.473768 | 7_1:-79184061 | None:intergenic |
| GCTGCTTTGGAGGCAATCAA+TGG | 0.477211 | 7_1:+79182287 | Msa1041610:CDS |
| TTCTAGAGATGAAGCCGATA+AGG | 0.478824 | 7_1:+79180716 | Msa1041610:CDS |
| GCACTCAAAACTCTACCAAA+TGG | 0.487510 | 7_1:-79184746 | None:intergenic |
| CACAATAAGAAAACATTACC+GGG | 0.488544 | 7_1:+79180753 | Msa1041610:CDS |
| AATGCATTGCGGCCAGATCT+CGG | 0.489842 | 7_1:+79183980 | Msa1041610:CDS |
| GGTTATGTTCCTCCATATAA+CGG | 0.491884 | 7_1:+79183665 | Msa1041610:CDS |
| CAAATGGGCTGATACTGAAA+AGG | 0.494167 | 7_1:+79183547 | Msa1041610:CDS |
| TGTTCCCTTAGTTGTCAAAT+GGG | 0.495874 | 7_1:+79183532 | Msa1041610:CDS |
| GTGCCTCCTGCAAGTTATGT+TGG | 0.499189 | 7_1:+79184031 | Msa1041610:CDS |
| GGAGGACTATTCAAAGGTCT+TGG | 0.500082 | 7_1:-79184115 | None:intergenic |
| GCTCTTATCCTGCTGTGCCA+GGG | 0.508282 | 7_1:+79184053 | Msa1041610:CDS |
| GGTTGATTCTGCATTGGTGG+CGG | 0.512156 | 7_1:-79183920 | None:intergenic |
| ATGATGCCTCACATGAATCA+AGG | 0.516257 | 7_1:+79183956 | Msa1041610:CDS |
| CAACATCCAATGGCATATCC+TGG | 0.520136 | 7_1:+79184079 | Msa1041610:CDS |
| AAATTGTATTAACATTAGAC+TGG | 0.525639 | 7_1:-79185066 | None:intergenic |
| AACTCTACCAAATGGTTGAA+AGG | 0.528070 | 7_1:-79184738 | None:intergenic |
| AGTTTCTAGGATTCATATTG+GGG | 0.528224 | 7_1:-79184003 | None:intergenic |
| CATAAGAGGGACAACAAACC+CGG | 0.531629 | 7_1:+79184984 | Msa1041610:CDS |
| AGACCTTTGAATAGTCCTCC+TGG | 0.532938 | 7_1:+79184118 | Msa1041610:CDS |
| TCTGCTATTAGTATGATGAA+TGG | 0.533660 | 7_1:+79184927 | Msa1041610:CDS |
| TCTGGTGGTGGTCAAGCTGA+AGG | 0.536580 | 7_1:+79184202 | Msa1041610:CDS |
| GACATTAATGGCGGAAACAA+AGG | 0.537761 | 7_1:+79180407 | Msa1041610:exon |
| AGCGGAGTTGCCATTTCCAC+CGG | 0.538304 | 7_1:-79184155 | None:intergenic |
| GGTTCTCAACAGACAAGTAA+AGG | 0.545378 | 7_1:+79182118 | Msa1041610:CDS |
| TTATTTGGAGCCATGCCTAT+GGG | 0.546418 | 7_1:+79183644 | Msa1041610:CDS |
| CCACCAATGCAGAATCAACC+TGG | 0.548396 | 7_1:+79183923 | Msa1041610:CDS |
| ATTGGTGGCGGCATGCGGTA+CGG | 0.551343 | 7_1:-79183908 | None:intergenic |
| TAACCAGGTTGATTCTGCAT+TGG | 0.557945 | 7_1:-79183926 | None:intergenic |
| TCTTGATCTCCAAATTCTTG+AGG | 0.562460 | 7_1:-79184704 | None:intergenic |
| GGCATGGCTCCAAATAATGA+AGG | 0.562854 | 7_1:-79183638 | None:intergenic |
| GAAGTATGCAGATGGCGAGT+TGG | 0.566206 | 7_1:+79181843 | Msa1041610:CDS |
| TCTGCATACTTCACTTGCAA+TGG | 0.570290 | 7_1:-79181832 | None:intergenic |
| ATTCCTCCAGGATATGCCAT+TGG | 0.572038 | 7_1:-79184085 | None:intergenic |
| ACCAAAACATTTGCTAACAC+CGG | 0.572530 | 7_1:-79184792 | None:intergenic |
| TTACTGATGAACACAAACAA+TGG | 0.572912 | 7_1:+79185013 | Msa1041610:exon |
| CCGGAAGGTGAAACAGAACC+AGG | 0.575325 | 7_1:-79184136 | None:intergenic |
| GGCATCATATTGTGGTAACC+AGG | 0.578815 | 7_1:-79183941 | None:intergenic |
| GGTTCTGTTTCACCTTCCGG+TGG | 0.581373 | 7_1:+79184139 | Msa1041610:CDS |
| CTTGGACTAATCATTCCTCC+AGG | 0.583450 | 7_1:-79184097 | None:intergenic |
| GATGGCGAGTTGGAAAGATT+AGG | 0.585947 | 7_1:+79181853 | Msa1041610:CDS |
| TCAGCCCATTTGACAACTAA+GGG | 0.587954 | 7_1:-79183536 | None:intergenic |
| AAAGCTACACGCGCTTCTCG+AGG | 0.592067 | 7_1:+79180564 | Msa1041610:CDS |
| ACAGTCTCAAGCTTCTAATG+TGG | 0.599106 | 7_1:+79183598 | Msa1041610:CDS |
| GCCAGGGTTACAACATCCAA+TGG | 0.600312 | 7_1:+79184069 | Msa1041610:CDS |
| CAGTCTCAAGCTTCTAATGT+GGG | 0.603411 | 7_1:+79183599 | Msa1041610:CDS |
| TAGATAAACAGATTTGCGCC+AGG | 0.605436 | 7_1:-79184674 | None:intergenic |
| ATTAAAGGTTCAGCATAAGA+GGG | 0.606375 | 7_1:+79184971 | Msa1041610:CDS |
| GTTCATCAGTAAGGTTTACC+GGG | 0.607881 | 7_1:-79185002 | None:intergenic |
| AGCAGATTGAGCAGCTTCTG+GGG | 0.608016 | 7_1:-79184910 | None:intergenic |
| GAAAGTGTGAAATTGTTCGT+AGG | 0.610831 | 7_1:+79180453 | Msa1041610:CDS |
| TCTGCATTGGTGGCGGCATG+CGG | 0.611389 | 7_1:-79183913 | None:intergenic |
| ATGAATGGATGCCAATTAGG+AGG | 0.617833 | 7_1:+79184942 | Msa1041610:CDS |
| GCCATTGGATGTTGTAACCC+TGG | 0.618480 | 7_1:-79184070 | None:intergenic |
| GCATTTCCTTGATTCATGTG+AGG | 0.618490 | 7_1:-79183962 | None:intergenic |
| TTGCAAGTGAAGTATGCAGA+TGG | 0.626113 | 7_1:+79181835 | Msa1041610:CDS |
| AATAGAGATAGACATTATGA+GGG | 0.626213 | 7_1:-79185146 | None:intergenic |
| TATGGAGGAACATAACCCAT+AGG | 0.632075 | 7_1:-79183659 | None:intergenic |
| CAATGGAAAGCACAAAATGG+AGG | 0.634591 | 7_1:+79182304 | Msa1041610:CDS |
| GAACCAGGAGGACTATTCAA+AGG | 0.637034 | 7_1:-79184121 | None:intergenic |
| TCATGTGAGGCATCATATTG+TGG | 0.649926 | 7_1:-79183949 | None:intergenic |
| GAGTTGCCATTTCCACCGGA+AGG | 0.654667 | 7_1:-79184151 | None:intergenic |
| GCAACTCCGCTACATCATCA+GGG | 0.663111 | 7_1:+79184167 | Msa1041610:CDS |
| CTTGGACTCGACATTAATGG+CGG | 0.668095 | 7_1:+79180398 | Msa1041610:exon |
| GCTGGACCCTGATGATGTAG+CGG | 0.669272 | 7_1:-79184173 | None:intergenic |
| AGGAACATAACCCATAGGCA+TGG | 0.673621 | 7_1:-79183654 | None:intergenic |
| TAGCCATAACCGTTATATGG+AGG | 0.682373 | 7_1:-79183674 | None:intergenic |
| GTCGTCGATGCAAATTGACA+AGG | 0.687287 | 7_1:-79180294 | None:intergenic |
| TGAATCAAGGAAATGCATTG+CGG | 0.688594 | 7_1:+79183969 | Msa1041610:CDS |
| TCAAGTACCGAAACACATGA+CGG | 0.692471 | 7_1:+79180476 | Msa1041610:CDS |
| ATAAACAGATTTGCGCCAGG+TGG | 0.694236 | 7_1:-79184671 | None:intergenic |
| ACAATAAGAAAACATTACCG+GGG | 0.696985 | 7_1:+79180754 | Msa1041610:CDS |
| GAGCCAACATAACTTGCAGG+AGG | 0.697782 | 7_1:-79184034 | None:intergenic |
| CAATAAGAAAACATTACCGG+GGG | 0.709469 | 7_1:+79180755 | Msa1041610:CDS |
| CATCCAATGGCATATCCTGG+AGG | 0.717452 | 7_1:+79184082 | Msa1041610:CDS |
| GAAGGTGAAACAGAACCAGG+AGG | 0.777635 | 7_1:-79184133 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAATTATGTAATTAT+TGG | + | chr7_1:79181356-79181375 | Msa1041610:intron | 10.0% |
| !!! | GTAATATAATGTATTTTATA+TGG | + | chr7_1:79182407-79182426 | Msa1041610:intron | 10.0% |
| !! | TCATATAAATAATTATTAAC+GGG | - | chr7_1:79183023-79183042 | None:intergenic | 10.0% |
| !! | GTCATATAAATAATTATTAA+CGG | - | chr7_1:79183024-79183043 | None:intergenic | 10.0% |
| !! | TTAATAATTATTTATATGAC+AGG | + | chr7_1:79183024-79183043 | Msa1041610:intron | 10.0% |
| !! | AAAAAAAAACACGAAAATTA+GGG | - | chr7_1:79180667-79180686 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACACGAAAATT+AGG | - | chr7_1:79180668-79180687 | None:intergenic | 15.0% |
| !! | TCATATGAATTGAATAAAAA+CGG | - | chr7_1:79180831-79180850 | None:intergenic | 15.0% |
| !!! | AATTTTAGCAATTTATGTTT+TGG | + | chr7_1:79180953-79180972 | Msa1041610:intron | 15.0% |
| !! | CTGATAATAATTTAAGAAAA+TGG | + | chr7_1:79181131-79181150 | Msa1041610:intron | 15.0% |
| !! | TAATAATTTAAGAAAATGGA+CGG | + | chr7_1:79181135-79181154 | Msa1041610:intron | 15.0% |
| !! | ATTTCTATAATTAAGTTTAG+TGG | + | chr7_1:79181387-79181406 | Msa1041610:intron | 15.0% |
| !! | AATAATGATACAAAATAATG+TGG | - | chr7_1:79181758-79181777 | None:intergenic | 15.0% |
| !! | GGAATAAAATTTAAAAATTC+AGG | - | chr7_1:79182352-79182371 | None:intergenic | 15.0% |
| !!! | TTATTCCTATTTTTCATTTT+TGG | + | chr7_1:79182365-79182384 | Msa1041610:intron | 15.0% |
| !! | CATGTTGATATATTTATATT+CGG | + | chr7_1:79184275-79184294 | Msa1041610:intron | 15.0% |
| !!! | ATATTACTATATTTTCACTT+AGG | + | chr7_1:79184647-79184666 | Msa1041610:intron | 15.0% |
| !!! | TTCGTGTTTTTTTTTTTTGT+AGG | + | chr7_1:79180672-79180691 | Msa1041610:intron | 20.0% |
| !! | ATTATTATCAGTGTCATATA+TGG | - | chr7_1:79181122-79181141 | None:intergenic | 20.0% |
| !! | AATAATTTAAGAAAATGGAC+GGG | + | chr7_1:79181136-79181155 | Msa1041610:intron | 20.0% |
| !! | CATTAGTGACATAATTAAAA+TGG | - | chr7_1:79181584-79181603 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTGTTTCTAATTC+AGG | + | chr7_1:79181801-79181820 | Msa1041610:intron | 20.0% |
| !! | AGATAATTACTTATGAAAGA+AGG | - | chr7_1:79181977-79181996 | None:intergenic | 20.0% |
| !!! | AAGGATTTACAAATTTTAAG+AGG | + | chr7_1:79182097-79182116 | Msa1041610:CDS | 20.0% |
| !! | ATTCATTCTTTATTCTTTCT+AGG | + | chr7_1:79182159-79182178 | Msa1041610:intron | 20.0% |
| !! | AAATTTAAAAATTCAGGTGA+TGG | - | chr7_1:79182346-79182365 | None:intergenic | 20.0% |
| !! | TACTACCAAAAATGAAAAAT+AGG | - | chr7_1:79182373-79182392 | None:intergenic | 20.0% |
| !! | ATTATATTACACAATTAACC+TGG | - | chr7_1:79182397-79182416 | None:intergenic | 20.0% |
| !!! | CATCTTGTATTTAAAATGAT+TGG | - | chr7_1:79182539-79182558 | None:intergenic | 20.0% |
| !!! | TCATTTTAAATACAAGATGA+AGG | + | chr7_1:79182540-79182559 | Msa1041610:intron | 20.0% |
| !!! | GTTACAATTTTAGTTGTAAA+TGG | + | chr7_1:79182792-79182811 | Msa1041610:intron | 20.0% |
| !! | AAAATTGAAATAACAATTGC+AGG | - | chr7_1:79182914-79182933 | None:intergenic | 20.0% |
| !!! | AAAATGTGATGATTTTTGAA+TGG | - | chr7_1:79183786-79183805 | None:intergenic | 20.0% |
| !! | AATAAGTTAAAGGACTAAAA+AGG | - | chr7_1:79184309-79184328 | None:intergenic | 20.0% |
| !!! | ATCTCTAAAATGAGTAAATT+TGG | - | chr7_1:79184535-79184554 | None:intergenic | 20.0% |
| !!! | TAAAGCCTTAAATACATTTT+TGG | - | chr7_1:79184594-79184613 | None:intergenic | 20.0% |
| !! | TAGTAATATTTATCGTTGTA+AGG | - | chr7_1:79184636-79184655 | None:intergenic | 20.0% |
| !! | CTTATTAGTAATGAATTTGA+TGG | + | chr7_1:79184826-79184845 | Msa1041610:intron | 20.0% |
| !! | AAATTGTATTAACATTAGAC+TGG | - | chr7_1:79185069-79185088 | None:intergenic | 20.0% |
| !!! | ATTTGGTTTTTCGTAATTTG+GGG | - | chr7_1:79180320-79180339 | None:intergenic | 25.0% |
| !!! | GATTTGGTTTTTCGTAATTT+GGG | - | chr7_1:79180321-79180340 | None:intergenic | 25.0% |
| !!! | AGATTTGGTTTTTCGTAATT+TGG | - | chr7_1:79180322-79180341 | None:intergenic | 25.0% |
| ! | TAGTAGATTTGAAGAATTAG+CGG | - | chr7_1:79180627-79180646 | None:intergenic | 25.0% |
| ! | TCACAATAAGAAAACATTAC+CGG | + | chr7_1:79180752-79180771 | Msa1041610:CDS | 25.0% |
| !! | TTATGCTGTTTAATTCAATG+TGG | + | chr7_1:79180803-79180822 | Msa1041610:intron | 25.0% |
| ! | ATAATTTAAGAAAATGGACG+GGG | + | chr7_1:79181137-79181156 | Msa1041610:intron | 25.0% |
| ! | GTTCATCAAAATAACAAACT+TGG | - | chr7_1:79181224-79181243 | None:intergenic | 25.0% |
| ! | TCTATAATTAAGTTTAGTGG+CGG | + | chr7_1:79181390-79181409 | Msa1041610:intron | 25.0% |
| !! | TTGCGTTTCATTGAAATTTT+TGG | + | chr7_1:79181492-79181511 | Msa1041610:intron | 25.0% |
| !! | TGCGTTTCATTGAAATTTTT+GGG | + | chr7_1:79181493-79181512 | Msa1041610:intron | 25.0% |
| ! | TAATTCATTCATAGGTTACT+TGG | - | chr7_1:79181528-79181547 | None:intergenic | 25.0% |
| ! | AGTTAACGTAATTCATTCAT+AGG | - | chr7_1:79181536-79181555 | None:intergenic | 25.0% |
| ! | TATGAATGAATTACGTTAAC+TGG | + | chr7_1:79181535-79181554 | Msa1041610:intron | 25.0% |
| ! | ATATTTGTATCACAACTACT+TGG | - | chr7_1:79181637-79181656 | None:intergenic | 25.0% |
| ! | TCAAAATGTTCAATAGTATC+CGG | - | chr7_1:79181670-79181689 | None:intergenic | 25.0% |
| ! | TCATTATTCTTCATTCAGAT+TGG | + | chr7_1:79181770-79181789 | Msa1041610:intron | 25.0% |
| ! | CATTATTCTTCATTCAGATT+GGG | + | chr7_1:79181771-79181790 | Msa1041610:intron | 25.0% |
| ! | GCATGTCATTGATATAAAAA+TGG | - | chr7_1:79181955-79181974 | None:intergenic | 25.0% |
| !!! | AAGTAAAGGTGCTTATTTTA+CGG | + | chr7_1:79182132-79182151 | Msa1041610:intron | 25.0% |
| !! | TCTTTATTCTTTCTAGGTTT+TGG | + | chr7_1:79182165-79182184 | Msa1041610:intron | 25.0% |
| ! | TCATTCTATACAGAAATAGA+AGG | + | chr7_1:79182465-79182484 | Msa1041610:intron | 25.0% |
| ! | ACTACTATTTAGCAATATAG+TGG | + | chr7_1:79182619-79182638 | Msa1041610:intron | 25.0% |
| !! | TTAGATAGATAACATGCTTT+TGG | + | chr7_1:79182724-79182743 | Msa1041610:intron | 25.0% |
| ! | TACAACTAAAATTGTAACTG+AGG | - | chr7_1:79182790-79182809 | None:intergenic | 25.0% |
| ! | AATGATAATAAATGACTTCC+AGG | - | chr7_1:79183409-79183428 | None:intergenic | 25.0% |
| ! | GGAAGTCATTTATTATCATT+TGG | + | chr7_1:79183409-79183428 | Msa1041610:intron | 25.0% |
| !! | GACATTAATTTTCTCTTGAT+AGG | + | chr7_1:79183862-79183881 | Msa1041610:intron | 25.0% |
| !!! | TAGTTTCTAGGATTCATATT+GGG | - | chr7_1:79184007-79184026 | None:intergenic | 25.0% |
| !!! | ATAGTTTCTAGGATTCATAT+TGG | - | chr7_1:79184008-79184027 | None:intergenic | 25.0% |
| !!! | AGTCCTTTAACTTATTTTTG+AGG | + | chr7_1:79184313-79184332 | Msa1041610:intron | 25.0% |
| ! | GAACCTCAAAAATAAGTTAA+AGG | - | chr7_1:79184319-79184338 | None:intergenic | 25.0% |
| !!! | CTTATTTTTGAGGTTCAATT+TGG | + | chr7_1:79184323-79184342 | Msa1041610:intron | 25.0% |
| !!! | TAGACTCATTTTAGAGTTAA+GGG | - | chr7_1:79184350-79184369 | None:intergenic | 25.0% |
| !!! | ATAGACTCATTTTAGAGTTA+AGG | - | chr7_1:79184351-79184370 | None:intergenic | 25.0% |
| ! | GTTTAGGGAAATAGTAATAA+AGG | - | chr7_1:79184478-79184497 | None:intergenic | 25.0% |
| ! | TTATTACTATTTCCCTAAAC+TGG | + | chr7_1:79184478-79184497 | Msa1041610:intron | 25.0% |
| ! | TTAATTTCTTACCTCCTAAT+TGG | - | chr7_1:79184956-79184975 | None:intergenic | 25.0% |
| ! | ATTAGGAGGTAAGAAATTAA+AGG | + | chr7_1:79184956-79184975 | Msa1041610:CDS | 25.0% |
| !!! | TTTGGTTTTTCGTAATTTGG+GGG | - | chr7_1:79180319-79180338 | None:intergenic | 30.0% |
| !! | TCTTTCTTCTTTCTGAGATT+TGG | - | chr7_1:79180337-79180356 | None:intergenic | 30.0% |
| TTTCTTTACACGAAACTTCT+TGG | + | chr7_1:79180380-79180399 | Msa1041610:five_prime_UTR | 30.0% | |
| CACAATAAGAAAACATTACC+GGG | + | chr7_1:79180753-79180772 | Msa1041610:CDS | 30.0% | |
| ACAATAAGAAAACATTACCG+GGG | + | chr7_1:79180754-79180773 | Msa1041610:CDS | 30.0% | |
| !!! | TTGGTGCTTATTGCTATTTT+TGG | + | chr7_1:79180972-79180991 | Msa1041610:intron | 30.0% |
| !!! | TGGTGCTTATTGCTATTTTT+GGG | + | chr7_1:79180973-79180992 | Msa1041610:intron | 30.0% |
| ACCAAAAATGTGAAACACTA+GGG | - | chr7_1:79181050-79181069 | None:intergenic | 30.0% | |
| AACCAAAAATGTGAAACACT+AGG | - | chr7_1:79181051-79181070 | None:intergenic | 30.0% | |
| GATGCATTATTGAACAGATA+AGG | + | chr7_1:79181251-79181270 | Msa1041610:intron | 30.0% | |
| ATTGAACAGATAAGGATGAT+TGG | + | chr7_1:79181259-79181278 | Msa1041610:intron | 30.0% | |
| ! | GAACACTATTTTCTTTGACA+AGG | - | chr7_1:79181321-79181340 | None:intergenic | 30.0% |
| TACAAATATGCCTAAAAAGC+CGG | + | chr7_1:79181648-79181667 | Msa1041610:intron | 30.0% | |
| TCAACTTCAGAAATGTTCTT+TGG | - | chr7_1:79182043-79182062 | None:intergenic | 30.0% | |
| ATCCTTTATAGTTCCATACT+TGG | - | chr7_1:79182083-79182102 | None:intergenic | 30.0% | |
| TTCCTTAATCACAATTCACA+AGG | + | chr7_1:79182190-79182209 | Msa1041610:intron | 30.0% | |
| ! | AATCAATGGAAAGCACAAAA+TGG | + | chr7_1:79182301-79182320 | Msa1041610:CDS | 30.0% |
| AAAATTGTAACTGAGGTTGA+AGG | - | chr7_1:79182783-79182802 | None:intergenic | 30.0% | |
| AAATGGTCTTTGCAGTATAT+TGG | + | chr7_1:79182809-79182828 | Msa1041610:intron | 30.0% | |
| ATTCAGTCACAAAATCTTGT+TGG | + | chr7_1:79182845-79182864 | Msa1041610:intron | 30.0% | |
| ! | ATTATTAACGGGTAAAACCT+AGG | - | chr7_1:79183012-79183031 | None:intergenic | 30.0% |
| ! | AGGGAAAATAATTTGTGCTT+GGG | - | chr7_1:79183302-79183321 | None:intergenic | 30.0% |
| ! | AGCATCTGATCAGTAATTTT+GGG | - | chr7_1:79183344-79183363 | None:intergenic | 30.0% |
| ! | TAGCATCTGATCAGTAATTT+TGG | - | chr7_1:79183345-79183364 | None:intergenic | 30.0% |
| TGCAAACACAAGACAAAAAA+AGG | - | chr7_1:79183383-79183402 | None:intergenic | 30.0% | |
| ACACACATGACAAAATTTGA+CGG | + | chr7_1:79183446-79183465 | Msa1041610:intron | 30.0% | |
| TGATATATGCTGTCATGTAT+AGG | + | chr7_1:79183502-79183521 | Msa1041610:intron | 30.0% | |
| GATATATGCTGTCATGTATA+GGG | + | chr7_1:79183503-79183522 | Msa1041610:intron | 30.0% | |
| !! | AGTTTCTAGGATTCATATTG+GGG | - | chr7_1:79184006-79184025 | None:intergenic | 30.0% |
| AAATGACCAACTTGTGTTAA+CGG | - | chr7_1:79184393-79184412 | None:intergenic | 30.0% | |
| TAGTAATAAAGGCTTAGCTT+TGG | - | chr7_1:79184467-79184486 | None:intergenic | 30.0% | |
| TCACTTGCAATGTTTGATAA+CGG | - | chr7_1:79184512-79184531 | None:intergenic | 30.0% | |
| AGGGACCAAAAATGTATTTA+AGG | + | chr7_1:79184586-79184605 | Msa1041610:intron | 30.0% | |
| TATCACATACCTCAAGAATT+TGG | + | chr7_1:79184695-79184714 | Msa1041610:CDS | 30.0% | |
| TTCATTACTAATAAGAGCAG+AGG | - | chr7_1:79184821-79184840 | None:intergenic | 30.0% | |
| !!! | TGAATTTGATGGATTTTGTG+TGG | + | chr7_1:79184837-79184856 | Msa1041610:intron | 30.0% |
| TCTGCTATTAGTATGATGAA+TGG | + | chr7_1:79184927-79184946 | Msa1041610:CDS | 30.0% | |
| AATTAAAGGTTCAGCATAAG+AGG | + | chr7_1:79184970-79184989 | Msa1041610:CDS | 30.0% | |
| ATTAAAGGTTCAGCATAAGA+GGG | + | chr7_1:79184971-79184990 | Msa1041610:CDS | 30.0% | |
| ATTGTTTGTGTTCATCAGTA+AGG | - | chr7_1:79185014-79185033 | None:intergenic | 30.0% | |
| TTACTGATGAACACAAACAA+TGG | + | chr7_1:79185013-79185032 | Msa1041610:exon | 30.0% | |
| ACGATGAATTATGGCGAATT+TGG | - | chr7_1:79180243-79180262 | None:intergenic | 35.0% | |
| ! | CTCTTTTGGACGATGAATTA+TGG | - | chr7_1:79180252-79180271 | None:intergenic | 35.0% |
| ! | CTTTCTCTTTCTCTCTCTTT+TGG | - | chr7_1:79180266-79180285 | None:intergenic | 35.0% |
| ! | GAAAGTGTGAAATTGTTCGT+AGG | + | chr7_1:79180453-79180472 | Msa1041610:CDS | 35.0% |
| CTTATTGTGACACGCATTAA+CGG | - | chr7_1:79180742-79180761 | None:intergenic | 35.0% | |
| CAATAAGAAAACATTACCGG+GGG | + | chr7_1:79180755-79180774 | Msa1041610:CDS | 35.0% | |
| GTGATGAAAGCTATAAGAGT+GGG | - | chr7_1:79181002-79181021 | None:intergenic | 35.0% | |
| AGTGATGAAAGCTATAAGAG+TGG | - | chr7_1:79181003-79181022 | None:intergenic | 35.0% | |
| TGTGAAACACTAGGGTATAT+GGG | - | chr7_1:79181042-79181061 | None:intergenic | 35.0% | |
| ATGTGAAACACTAGGGTATA+TGG | - | chr7_1:79181043-79181062 | None:intergenic | 35.0% | |
| ! | ACCCTAGTGTTTCACATTTT+TGG | + | chr7_1:79181046-79181065 | Msa1041610:intron | 35.0% |
| !! | TGTATCGTGTTAGTTCTACT+AGG | + | chr7_1:79181193-79181212 | Msa1041610:intron | 35.0% |
| ! | TGACACAATTGTTGTTACTG+TGG | + | chr7_1:79181435-79181454 | Msa1041610:intron | 35.0% |
| ! | GACACAATTGTTGTTACTGT+GGG | + | chr7_1:79181436-79181455 | Msa1041610:intron | 35.0% |
| AATGAATTACGTTAACTGGC+AGG | + | chr7_1:79181539-79181558 | Msa1041610:intron | 35.0% | |
| GACATAATTAAAATGGAGCG+TGG | - | chr7_1:79181577-79181596 | None:intergenic | 35.0% | |
| TTTGTATCACAACTACTTGG+AGG | - | chr7_1:79181634-79181653 | None:intergenic | 35.0% | |
| ! | TCAATAGTATCCGGCTTTTT+AGG | - | chr7_1:79181661-79181680 | None:intergenic | 35.0% |
| TTTGACGACTTGATTATCCA+AGG | + | chr7_1:79181685-79181704 | Msa1041610:intron | 35.0% | |
| ! | TGTTTAGAACACTGAAGTGT+TGG | + | chr7_1:79181711-79181730 | Msa1041610:intron | 35.0% |
| TCAGAACACAAACTCTTCAT+TGG | + | chr7_1:79182010-79182029 | Msa1041610:intron | 35.0% | |
| CTCCAAGTATGGAACTATAA+AGG | + | chr7_1:79182078-79182097 | Msa1041610:CDS | 35.0% | |
| ! | AGCCTTGTGAATTGTGATTA+AGG | - | chr7_1:79182195-79182214 | None:intergenic | 35.0% |
| TTCTCTTACCATGTTGTAGT+AGG | + | chr7_1:79182224-79182243 | Msa1041610:intron | 35.0% | |
| !!! | TTTCATTTTTGGTAGTAGCC+AGG | + | chr7_1:79182376-79182395 | Msa1041610:intron | 35.0% |
| ATACAGAAATAGAAGGCAAG+TGG | + | chr7_1:79182472-79182491 | Msa1041610:intron | 35.0% | |
| TACAGAAATAGAAGGCAAGT+GGG | + | chr7_1:79182473-79182492 | Msa1041610:intron | 35.0% | |
| ! | GTTGAACCGCTTATTCTTTT+TGG | + | chr7_1:79182502-79182521 | Msa1041610:intron | 35.0% |
| ! | AACCGCTTATTCTTTTTGGA+TGG | + | chr7_1:79182506-79182525 | Msa1041610:intron | 35.0% |
| AGCCATCCAAAAAGAATAAG+CGG | - | chr7_1:79182511-79182530 | None:intergenic | 35.0% | |
| TTTGTATCCCTGTCTCAAAA+TGG | + | chr7_1:79182931-79182950 | Msa1041610:intron | 35.0% | |
| !!! | TAGGTTTCCATTTTGAGACA+GGG | - | chr7_1:79182941-79182960 | None:intergenic | 35.0% |
| !!! | TTAGGTTTCCATTTTGAGAC+AGG | - | chr7_1:79182942-79182961 | None:intergenic | 35.0% |
| GTCTCAAAATGGAAACCTAA+TGG | + | chr7_1:79182942-79182961 | Msa1041610:intron | 35.0% | |
| TCAAAATGGAAACCTAATGG+TGG | + | chr7_1:79182945-79182964 | Msa1041610:intron | 35.0% | |
| CAAAATGGAAACCTAATGGT+GGG | + | chr7_1:79182946-79182965 | Msa1041610:intron | 35.0% | |
| AACTTGATCCAAGTTTGGAA+AGG | + | chr7_1:79183051-79183070 | Msa1041610:intron | 35.0% | |
| ACTTGATCCAAGTTTGGAAA+GGG | + | chr7_1:79183052-79183071 | Msa1041610:intron | 35.0% | |
| ! | TGATTTTCCCTTTCCAAACT+TGG | - | chr7_1:79183062-79183081 | None:intergenic | 35.0% |
| TCTTGAGATTTATTCAGCTC+GGG | - | chr7_1:79183128-79183147 | None:intergenic | 35.0% | |
| GTCTTGAGATTTATTCAGCT+CGG | - | chr7_1:79183129-79183148 | None:intergenic | 35.0% | |
| AGCTGAATAAATCTCAAGAC+TGG | + | chr7_1:79183129-79183148 | Msa1041610:intron | 35.0% | |
| GCTGAATAAATCTCAAGACT+GGG | + | chr7_1:79183130-79183149 | Msa1041610:intron | 35.0% | |
| ! | GAGGGAAAATAATTTGTGCT+TGG | - | chr7_1:79183303-79183322 | None:intergenic | 35.0% |
| ! | GCACAAATTATTTTCCCTCT+TGG | + | chr7_1:79183304-79183323 | Msa1041610:intron | 35.0% |
| TGTTCCCTTAGTTGTCAAAT+GGG | + | chr7_1:79183532-79183551 | Msa1041610:CDS | 35.0% | |
| TCTCAGCATCCTTCATTATT+TGG | + | chr7_1:79183629-79183648 | Msa1041610:CDS | 35.0% | |
| GGTTATGTTCCTCCATATAA+CGG | + | chr7_1:79183665-79183684 | Msa1041610:CDS | 35.0% | |
| TGATAGCCATAACCGTTATA+TGG | - | chr7_1:79183680-79183699 | None:intergenic | 35.0% | |
| ATATAACGGTTATGGCTATC+AGG | + | chr7_1:79183679-79183698 | Msa1041610:CDS | 35.0% | |
| GAGAAGAACTGCATGAATTA+AGG | - | chr7_1:79183749-79183768 | None:intergenic | 35.0% | |
| TGAATCAAGGAAATGCATTG+CGG | + | chr7_1:79183969-79183988 | Msa1041610:CDS | 35.0% | |
| ! | TGTTAACGGACATAACTTAG+GGG | - | chr7_1:79184379-79184398 | None:intergenic | 35.0% |
| ! | GTGTTAACGGACATAACTTA+GGG | - | chr7_1:79184380-79184399 | None:intergenic | 35.0% |
| ! | TGTGTTAACGGACATAACTT+AGG | - | chr7_1:79184381-79184400 | None:intergenic | 35.0% |
| TTATGTCCGTTAACACAAGT+TGG | + | chr7_1:79184384-79184403 | Msa1041610:intron | 35.0% | |
| ACCAAACCGAACCTTAAATT+AGG | + | chr7_1:79184560-79184579 | Msa1041610:intron | 35.0% | |
| ! | CCTTAGCCTAATTTAAGGTT+CGG | - | chr7_1:79184569-79184588 | None:intergenic | 35.0% |
| CGAACCTTAAATTAGGCTAA+GGG | + | chr7_1:79184567-79184586 | Msa1041610:intron | 35.0% | |
| TCTTGATCTCCAAATTCTTG+AGG | - | chr7_1:79184707-79184726 | None:intergenic | 35.0% | |
| AACTCTACCAAATGGTTGAA+AGG | - | chr7_1:79184741-79184760 | None:intergenic | 35.0% | |
| ! | GTTTTTGTTGACAAAGCTAC+CGG | + | chr7_1:79184773-79184792 | Msa1041610:CDS | 35.0% |
| ! | ACCAAAACATTTGCTAACAC+CGG | - | chr7_1:79184795-79184814 | None:intergenic | 35.0% |
| ATGATGAATGGATGCCAATT+AGG | + | chr7_1:79184939-79184958 | Msa1041610:CDS | 35.0% | |
| TGTTCATCAGTAAGGTTTAC+CGG | - | chr7_1:79185006-79185025 | None:intergenic | 35.0% | |
| CTTCTTGGACTCGACATTAA+TGG | + | chr7_1:79180395-79180414 | Msa1041610:exon | 40.0% | |
| ! | GACATTAATGGCGGAAACAA+AGG | + | chr7_1:79180407-79180426 | Msa1041610:exon | 40.0% |
| !! | TCAAGTACCGAAACACATGA+CGG | + | chr7_1:79180476-79180495 | Msa1041610:CDS | 40.0% |
| TCATCTTCCGTCATGTGTTT+CGG | - | chr7_1:79180486-79180505 | None:intergenic | 40.0% | |
| !! | TTATCGGCTTCATCTCTAGA+AGG | - | chr7_1:79180717-79180736 | None:intergenic | 40.0% |
| ! | TTCTAGAGATGAAGCCGATA+AGG | + | chr7_1:79180716-79180735 | Msa1041610:CDS | 40.0% |
| AAAATTACTAAACGCACCCC+CGG | - | chr7_1:79180774-79180793 | None:intergenic | 40.0% | |
| TGAAACACTAGGGTATATGG+GGG | - | chr7_1:79181040-79181059 | None:intergenic | 40.0% | |
| GTGAAACACTAGGGTATATG+GGG | - | chr7_1:79181041-79181060 | None:intergenic | 40.0% | |
| AGAAAATGGACGGGGTTAAA+TGG | + | chr7_1:79181145-79181164 | Msa1041610:intron | 40.0% | |
| ! | TAAGTTTAGTGGCGGAATTG+TGG | + | chr7_1:79181398-79181417 | Msa1041610:intron | 40.0% |
| GAATTGTGGTCTGGAAAACA+CGG | + | chr7_1:79181412-79181431 | Msa1041610:intron | 40.0% | |
| ACAAACGCAACTTATCATGC+AGG | - | chr7_1:79181607-79181626 | None:intergenic | 40.0% | |
| ! | CAGTGTTCTAAACAAAGCCT+TGG | - | chr7_1:79181705-79181724 | None:intergenic | 40.0% |
| TCTGCATACTTCACTTGCAA+TGG | - | chr7_1:79181835-79181854 | None:intergenic | 40.0% | |
| TTGCAAGTGAAGTATGCAGA+TGG | + | chr7_1:79181835-79181854 | Msa1041610:CDS | 40.0% | |
| ! | TCTGCACTTTTCTCCAAGTA+TGG | + | chr7_1:79182067-79182086 | Msa1041610:CDS | 40.0% |
| GGTTCTCAACAGACAAGTAA+AGG | + | chr7_1:79182118-79182137 | Msa1041610:CDS | 40.0% | |
| ATGCACAACCTACTACAACA+TGG | - | chr7_1:79182235-79182254 | None:intergenic | 40.0% | |
| ! | CAATGGAAAGCACAAAATGG+AGG | + | chr7_1:79182304-79182323 | Msa1041610:CDS | 40.0% |
| AGTTGAAACCCTGACTAAGA+TGG | + | chr7_1:79182686-79182705 | Msa1041610:intron | 40.0% | |
| !!! | TGCTTTTGGTTCCTTGTATG+TGG | + | chr7_1:79182738-79182757 | Msa1041610:intron | 40.0% |
| GTTCCTTGTATGTGGTAGAA+TGG | + | chr7_1:79182746-79182765 | Msa1041610:intron | 40.0% | |
| TCTCCATTCTACCACATACA+AGG | - | chr7_1:79182752-79182771 | None:intergenic | 40.0% | |
| CAGTATATTGGACCTTCAAG+CGG | + | chr7_1:79182821-79182840 | Msa1041610:intron | 40.0% | |
| ! | TTCCCTACAATGGCTTGTAT+AGG | + | chr7_1:79182973-79182992 | Msa1041610:intron | 40.0% |
| GTCCTATACAAGCCATTGTA+GGG | - | chr7_1:79182978-79182997 | None:intergenic | 40.0% | |
| TGTCCTATACAAGCCATTGT+AGG | - | chr7_1:79182979-79182998 | None:intergenic | 40.0% | |
| TTGACTGAAACAGTGCACAA+AGG | - | chr7_1:79183177-79183196 | None:intergenic | 40.0% | |
| !! | TGAAGACTAGTTTGCCAAGA+GGG | - | chr7_1:79183321-79183340 | None:intergenic | 40.0% |
| GTGTTCCCTTAGTTGTCAAA+TGG | + | chr7_1:79183531-79183550 | Msa1041610:CDS | 40.0% | |
| TCAGCCCATTTGACAACTAA+GGG | - | chr7_1:79183539-79183558 | None:intergenic | 40.0% | |
| ATCAGCCCATTTGACAACTA+AGG | - | chr7_1:79183540-79183559 | None:intergenic | 40.0% | |
| !! | CAAATGGGCTGATACTGAAA+AGG | + | chr7_1:79183547-79183566 | Msa1041610:CDS | 40.0% |
| ACAGTCTCAAGCTTCTAATG+TGG | + | chr7_1:79183598-79183617 | Msa1041610:CDS | 40.0% | |
| CAGTCTCAAGCTTCTAATGT+GGG | + | chr7_1:79183599-79183618 | Msa1041610:CDS | 40.0% | |
| ! | ATTATTTGGAGCCATGCCTA+TGG | + | chr7_1:79183643-79183662 | Msa1041610:CDS | 40.0% |
| ! | TTATTTGGAGCCATGCCTAT+GGG | + | chr7_1:79183644-79183663 | Msa1041610:CDS | 40.0% |
| TATGGAGGAACATAACCCAT+AGG | - | chr7_1:79183662-79183681 | None:intergenic | 40.0% | |
| GTTCCTCCATATAACGGTTA+TGG | + | chr7_1:79183671-79183690 | Msa1041610:CDS | 40.0% | |
| TAGCCATAACCGTTATATGG+AGG | - | chr7_1:79183677-79183696 | None:intergenic | 40.0% | |
| TTGAATGGACGACAGTACTA+TGG | - | chr7_1:79183771-79183790 | None:intergenic | 40.0% | |
| ! | ATTTTCTCTTGATAGGCTCC+TGG | + | chr7_1:79183869-79183888 | Msa1041610:intron | 40.0% |
| !! | TAACCAGGTTGATTCTGCAT+TGG | - | chr7_1:79183929-79183948 | None:intergenic | 40.0% |
| ! | TCATGTGAGGCATCATATTG+TGG | - | chr7_1:79183952-79183971 | None:intergenic | 40.0% |
| ATGATGCCTCACATGAATCA+AGG | + | chr7_1:79183956-79183975 | Msa1041610:CDS | 40.0% | |
| GCATTTCCTTGATTCATGTG+AGG | - | chr7_1:79183965-79183984 | None:intergenic | 40.0% | |
| ! | TAAGAGCCAACATAACTTGC+AGG | - | chr7_1:79184040-79184059 | None:intergenic | 40.0% |
| ! | GCCTAATTTAAGGTTCGGTT+TGG | - | chr7_1:79184564-79184583 | None:intergenic | 40.0% |
| CCGAACCTTAAATTAGGCTA+AGG | + | chr7_1:79184566-79184585 | Msa1041610:intron | 40.0% | |
| TGGTCCCTTAGCCTAATTTA+AGG | - | chr7_1:79184574-79184593 | None:intergenic | 40.0% | |
| ! | TATTTTCACTTAGGACCACC+TGG | + | chr7_1:79184656-79184675 | Msa1041610:intron | 40.0% |
| TAGATAAACAGATTTGCGCC+AGG | - | chr7_1:79184677-79184696 | None:intergenic | 40.0% | |
| GCTAATGCCTTTCAACCATT+TGG | + | chr7_1:79184731-79184750 | Msa1041610:CDS | 40.0% | |
| GCACTCAAAACTCTACCAAA+TGG | - | chr7_1:79184749-79184768 | None:intergenic | 40.0% | |
| !! | ACCGGTGTTAGCAAATGTTT+TGG | + | chr7_1:79184791-79184810 | Msa1041610:CDS | 40.0% |
| ! | TGATGAGAGCTCTCATTTTC+AGG | + | chr7_1:79184870-79184889 | Msa1041610:intron | 40.0% |
| ! | GATGAGAGCTCTCATTTTCA+GGG | + | chr7_1:79184871-79184890 | Msa1041610:intron | 40.0% |
| ATGAATGGATGCCAATTAGG+AGG | + | chr7_1:79184942-79184961 | Msa1041610:CDS | 40.0% | |
| GTTCATCAGTAAGGTTTACC+GGG | - | chr7_1:79185005-79185024 | None:intergenic | 40.0% | |
| GTCGTCGATGCAAATTGACA+AGG | - | chr7_1:79180297-79180316 | None:intergenic | 45.0% | |
| CTTGGACTCGACATTAATGG+CGG | + | chr7_1:79180398-79180417 | Msa1041610:exon | 45.0% | |
| ! | ACACGCATTAACGGCCTTAT+CGG | - | chr7_1:79180733-79180752 | None:intergenic | 45.0% |
| !! | TCGTGTTAGTTCTACTAGGC+TGG | + | chr7_1:79181197-79181216 | Msa1041610:intron | 45.0% |
| !! | CGTGTTAGTTCTACTAGGCT+GGG | + | chr7_1:79181198-79181217 | Msa1041610:intron | 45.0% |
| TAACTGGCAGGTGTCCATAT+AGG | + | chr7_1:79181551-79181570 | Msa1041610:intron | 45.0% | |
| AAAATGGAGCGTGGCCTATA+TGG | - | chr7_1:79181568-79181587 | None:intergenic | 45.0% | |
| ! | GATGGCGAGTTGGAAAGATT+AGG | + | chr7_1:79181853-79181872 | Msa1041610:CDS | 45.0% |
| ! | AGCAGCAAGAGCTTGTTCTT+TGG | - | chr7_1:79182273-79182292 | None:intergenic | 45.0% |
| ! | AGAACAAGCTCTTGCTGCTT+TGG | + | chr7_1:79182274-79182293 | Msa1041610:CDS | 45.0% |
| ! | GGAAAGCACAAAATGGAGGT+TGG | + | chr7_1:79182308-79182327 | Msa1041610:intron | 45.0% |
| CGTTCATGCCATCTTAGTCA+GGG | - | chr7_1:79182697-79182716 | None:intergenic | 45.0% | |
| CCTGACTAAGATGGCATGAA+CGG | + | chr7_1:79182695-79182714 | Msa1041610:intron | 45.0% | |
| TAGGGAACAAACCCACCATT+AGG | - | chr7_1:79182960-79182979 | None:intergenic | 45.0% | |
| TAGGACATTGTTCCACACCT+AGG | + | chr7_1:79182992-79183011 | Msa1041610:intron | 45.0% | |
| ! | TAACGGGTAAAACCTAGGTG+TGG | - | chr7_1:79183007-79183026 | None:intergenic | 45.0% |
| GCTCGAACTTGATCCAAGTT+TGG | + | chr7_1:79183046-79183065 | Msa1041610:intron | 45.0% | |
| GGAAAGGGAAAATCAAGCTC+TGG | + | chr7_1:79183067-79183086 | Msa1041610:intron | 45.0% | |
| GCACAAAGGTTTGTGTGCAT+GGG | - | chr7_1:79183163-79183182 | None:intergenic | 45.0% | |
| TGCACAAAGGTTTGTGTGCA+TGG | - | chr7_1:79183164-79183183 | None:intergenic | 45.0% | |
| !! | GTGAAGACTAGTTTGCCAAG+AGG | - | chr7_1:79183322-79183341 | None:intergenic | 45.0% |
| TGTCTTGTGTTTGCATGACC+TGG | + | chr7_1:79183388-79183407 | Msa1041610:intron | 45.0% | |
| ACTGTGCTTTCTGAGCTCTT+CGG | - | chr7_1:79183583-79183602 | None:intergenic | 45.0% | |
| GGCATGGCTCCAAATAATGA+AGG | - | chr7_1:79183641-79183660 | None:intergenic | 45.0% | |
| AGGAACATAACCCATAGGCA+TGG | - | chr7_1:79183657-79183676 | None:intergenic | 45.0% | |
| TGATAGGCTCCTGGAAGTTA+TGG | + | chr7_1:79183878-79183897 | Msa1041610:intron | 45.0% | |
| GATAGGCTCCTGGAAGTTAT+GGG | + | chr7_1:79183879-79183898 | Msa1041610:intron | 45.0% | |
| GGCATCATATTGTGGTAACC+AGG | - | chr7_1:79183944-79183963 | None:intergenic | 45.0% | |
| ! | GGAGGCACATGATAGTTTCT+AGG | - | chr7_1:79184019-79184038 | None:intergenic | 45.0% |
| CAACATCCAATGGCATATCC+TGG | + | chr7_1:79184079-79184098 | Msa1041610:CDS | 45.0% | |
| ATTCCTCCAGGATATGCCAT+TGG | - | chr7_1:79184088-79184107 | None:intergenic | 45.0% | |
| CTTGGACTAATCATTCCTCC+AGG | - | chr7_1:79184100-79184119 | None:intergenic | 45.0% | |
| GGAGGACTATTCAAAGGTCT+TGG | - | chr7_1:79184118-79184137 | None:intergenic | 45.0% | |
| AGACCTTTGAATAGTCCTCC+TGG | + | chr7_1:79184118-79184137 | Msa1041610:CDS | 45.0% | |
| GAACCAGGAGGACTATTCAA+AGG | - | chr7_1:79184124-79184143 | None:intergenic | 45.0% | |
| TCAGGGTCCAGCAAAAATTC+TGG | + | chr7_1:79184184-79184203 | Msa1041610:CDS | 45.0% | |
| TCCAGCAAAAATTCTGGTGG+TGG | + | chr7_1:79184190-79184209 | Msa1041610:CDS | 45.0% | |
| ! | ACCACCACCAGAATTTTTGC+TGG | - | chr7_1:79184194-79184213 | None:intergenic | 45.0% |
| !! | GCTGTTAACTAGTGCTGATG+TGG | + | chr7_1:79184430-79184449 | Msa1041610:intron | 45.0% |
| ACGGTGTTTGTGCCAGTTTA+GGG | - | chr7_1:79184493-79184512 | None:intergenic | 45.0% | |
| AACGGTGTTTGTGCCAGTTT+AGG | - | chr7_1:79184494-79184513 | None:intergenic | 45.0% | |
| ATAAACAGATTTGCGCCAGG+TGG | - | chr7_1:79184674-79184693 | None:intergenic | 45.0% | |
| TAGCAGATTGAGCAGCTTCT+GGG | - | chr7_1:79184914-79184933 | None:intergenic | 45.0% | |
| ATAGCAGATTGAGCAGCTTC+TGG | - | chr7_1:79184915-79184934 | None:intergenic | 45.0% | |
| CATAAGAGGGACAACAAACC+CGG | + | chr7_1:79184984-79185003 | Msa1041610:CDS | 45.0% | |
| ! | TTAGTGGCGGAATTGTGGTC+TGG | + | chr7_1:79181403-79181422 | Msa1041610:intron | 50.0% |
| GAAGTATGCAGATGGCGAGT+TGG | + | chr7_1:79181843-79181862 | Msa1041610:CDS | 50.0% | |
| !! | ACAAGCTCTTGCTGCTTTGG+AGG | + | chr7_1:79182277-79182296 | Msa1041610:CDS | 50.0% |
| !! | GCTGCTTTGGAGGCAATCAA+TGG | + | chr7_1:79182287-79182306 | Msa1041610:CDS | 50.0% |
| ATAGAAGGCAAGTGGGCAAC+AGG | + | chr7_1:79182480-79182499 | Msa1041610:intron | 50.0% | |
| CCGTTCATGCCATCTTAGTC+AGG | - | chr7_1:79182698-79182717 | None:intergenic | 50.0% | |
| ! | TGTGACTGAATGCCGCTTGA+AGG | - | chr7_1:79182836-79182855 | None:intergenic | 50.0% |
| ! | GGTGGGTTTGTTCCCTACAA+TGG | + | chr7_1:79182963-79182982 | Msa1041610:intron | 50.0% |
| CTGTGCTTTCTGAGCTCTTC+GGG | - | chr7_1:79183582-79183601 | None:intergenic | 50.0% | |
| ! | GGTTGATTCTGCATTGGTGG+CGG | - | chr7_1:79183923-79183942 | None:intergenic | 50.0% |
| !! | CCAGGTTGATTCTGCATTGG+TGG | - | chr7_1:79183926-79183945 | None:intergenic | 50.0% |
| CCACCAATGCAGAATCAACC+TGG | + | chr7_1:79183923-79183942 | Msa1041610:CDS | 50.0% | |
| AATGCATTGCGGCCAGATCT+CGG | + | chr7_1:79183980-79183999 | Msa1041610:CDS | 50.0% | |
| TTCATATTGGGGCCGAGATC+TGG | - | chr7_1:79183995-79184014 | None:intergenic | 50.0% | |
| GTGCCTCCTGCAAGTTATGT+TGG | + | chr7_1:79184031-79184050 | Msa1041610:CDS | 50.0% | |
| ! | GAGCCAACATAACTTGCAGG+AGG | - | chr7_1:79184037-79184056 | None:intergenic | 50.0% |
| GCCAGGGTTACAACATCCAA+TGG | + | chr7_1:79184069-79184088 | Msa1041610:CDS | 50.0% | |
| GCCATTGGATGTTGTAACCC+TGG | - | chr7_1:79184073-79184092 | None:intergenic | 50.0% | |
| CATCCAATGGCATATCCTGG+AGG | + | chr7_1:79184082-79184101 | Msa1041610:CDS | 50.0% | |
| GAAGGTGAAACAGAACCAGG+AGG | - | chr7_1:79184136-79184155 | None:intergenic | 50.0% | |
| !! | CCTGGTTCTGTTTCACCTTC+CGG | + | chr7_1:79184136-79184155 | Msa1041610:CDS | 50.0% |
| GTTTCACCTTCCGGTGGAAA+TGG | + | chr7_1:79184145-79184164 | Msa1041610:CDS | 50.0% | |
| GCAACTCCGCTACATCATCA+GGG | + | chr7_1:79184167-79184186 | Msa1041610:CDS | 50.0% | |
| GGGTCCAGCAAAAATTCTGG+TGG | + | chr7_1:79184187-79184206 | Msa1041610:CDS | 50.0% | |
| AGCAGATTGAGCAGCTTCTG+GGG | - | chr7_1:79184913-79184932 | None:intergenic | 50.0% | |
| AAAGCTACACGCGCTTCTCG+AGG | + | chr7_1:79180564-79180583 | Msa1041610:CDS | 55.0% | |
| GGCATGAGCCCATAACTTCC+AGG | - | chr7_1:79183890-79183909 | None:intergenic | 55.0% | |
| GCTCTTATCCTGCTGTGCCA+GGG | + | chr7_1:79184053-79184072 | Msa1041610:CDS | 55.0% | |
| TGTTGTAACCCTGGCACAGC+AGG | - | chr7_1:79184064-79184083 | None:intergenic | 55.0% | |
| CCGGAAGGTGAAACAGAACC+AGG | - | chr7_1:79184139-79184158 | None:intergenic | 55.0% | |
| GGTTCTGTTTCACCTTCCGG+TGG | + | chr7_1:79184139-79184158 | Msa1041610:CDS | 55.0% | |
| ! | GAGTTGCCATTTCCACCGGA+AGG | - | chr7_1:79184154-79184173 | None:intergenic | 55.0% |
| ! | AGCGGAGTTGCCATTTCCAC+CGG | - | chr7_1:79184158-79184177 | None:intergenic | 55.0% |
| GGCAACTCCGCTACATCATC+AGG | + | chr7_1:79184166-79184185 | Msa1041610:CDS | 55.0% | |
| ! | GCTGGACCCTGATGATGTAG+CGG | - | chr7_1:79184176-79184195 | None:intergenic | 55.0% |
| !! | TCTGGTGGTGGTCAAGCTGA+AGG | + | chr7_1:79184202-79184221 | Msa1041610:CDS | 55.0% |
| !! | ATTGGTGGCGGCATGCGGTA+CGG | - | chr7_1:79183911-79183930 | None:intergenic | 60.0% |
| !! | TCTGCATTGGTGGCGGCATG+CGG | - | chr7_1:79183916-79183935 | None:intergenic | 60.0% |
| GGCTCTTATCCTGCTGTGCC+AGG | + | chr7_1:79184052-79184071 | Msa1041610:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79180211 | 79185154 | 79180211 | ID=Msa1041610;Name=Msa1041610 |
| chr7_1 | mRNA | 79180211 | 79185154 | 79180211 | ID=Msa1041610-mRNA-1;Parent=Msa1041610;Name=Msa1041610-mRNA-1;_AED=0.05;_eAED=0.05;_QI=203|0.87|0.88|1|1|1|9|135|434 |
| chr7_1 | exon | 79180211 | 79180585 | 79180211 | ID=Msa1041610-mRNA-1:exon:21322;Parent=Msa1041610-mRNA-1 |
| chr7_1 | exon | 79180694 | 79180776 | 79180694 | ID=Msa1041610-mRNA-1:exon:21323;Parent=Msa1041610-mRNA-1 |
| chr7_1 | exon | 79181823 | 79181874 | 79181823 | ID=Msa1041610-mRNA-1:exon:21324;Parent=Msa1041610-mRNA-1 |
| chr7_1 | exon | 79182014 | 79182139 | 79182014 | ID=Msa1041610-mRNA-1:exon:21325;Parent=Msa1041610-mRNA-1 |
| chr7_1 | exon | 79182243 | 79182325 | 79182243 | ID=Msa1041610-mRNA-1:exon:21326;Parent=Msa1041610-mRNA-1 |
| chr7_1 | exon | 79183524 | 79183700 | 79183524 | ID=Msa1041610-mRNA-1:exon:21327;Parent=Msa1041610-mRNA-1 |
| chr7_1 | exon | 79183884 | 79184223 | 79183884 | ID=Msa1041610-mRNA-1:exon:21328;Parent=Msa1041610-mRNA-1 |
| chr7_1 | exon | 79184669 | 79184812 | 79184669 | ID=Msa1041610-mRNA-1:exon:21329;Parent=Msa1041610-mRNA-1 |
| chr7_1 | exon | 79184892 | 79185154 | 79184892 | ID=Msa1041610-mRNA-1:exon:21330;Parent=Msa1041610-mRNA-1 |
| chr7_1 | five_prime_UTR | 79180211 | 79180413 | 79180211 | ID=Msa1041610-mRNA-1:five_prime_utr;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79180414 | 79180585 | 79180414 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79180694 | 79180776 | 79180694 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79181823 | 79181874 | 79181823 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79182014 | 79182139 | 79182014 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79182243 | 79182325 | 79182243 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79183524 | 79183700 | 79183524 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79183884 | 79184223 | 79183884 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79184669 | 79184812 | 79184669 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | CDS | 79184892 | 79185019 | 79184892 | ID=Msa1041610-mRNA-1:cds;Parent=Msa1041610-mRNA-1 |
| chr7_1 | three_prime_UTR | 79185020 | 79185154 | 79185020 | ID=Msa1041610-mRNA-1:three_prime_utr;Parent=Msa1041610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
