AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0242820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0242820 MtrunA17_Chr2g0295241 97.561 451 11 0 18 468 2 452 0.0 900
Msa0242820 MtrunA17_Chr4g0067811 72.851 442 117 2 28 467 13 453 0.0 660
Msa0242820 MtrunA17_Chr7g0270821 51.747 458 213 4 11 465 2 454 3.52e-168 481
Msa0242820 MtrunA17_Chr1g0193961 57.071 396 167 2 49 444 39 431 4.90e-163 469
Msa0242820 MtrunA17_Chr8g0387391 50.761 394 193 1 49 441 40 433 1.58e-146 427
Msa0242820 MtrunA17_Chr7g0255311 48.478 427 215 3 23 444 32 458 1.61e-145 425
Msa0242820 MtrunA17_Chr1g0202651 48.662 411 206 2 39 444 37 447 8.18e-142 415
Msa0242820 MtrunA17_Chr3g0095221 49.395 413 195 4 49 455 43 447 1.31e-139 408
Msa0242820 MtrunA17_Chr1g0202641 47.442 430 224 2 17 444 18 447 4.14e-139 424
Msa0242820 MtrunA17_Chr1g0202641 48.139 403 208 1 44 445 546 948 2.95e-133 408
Msa0242820 MtrunA17_Chr1g0202621 49.118 397 195 2 49 444 44 434 8.11e-137 402
Msa0242820 MtrunA17_Chr7g0248451 45.763 413 223 1 46 457 48 460 8.26e-136 400
Msa0242820 MtrunA17_Chr8g0348491 44.035 461 246 3 20 468 19 479 7.73e-134 394
Msa0242820 MtrunA17_Chr3g0130251 49.510 408 203 2 48 455 71 475 7.71e-132 389
Msa0242820 MtrunA17_Chr5g0442221 49.752 404 196 4 46 444 37 438 3.10e-129 382
Msa0242820 MtrunA17_Chr4g0070281 42.995 414 231 3 33 444 58 468 2.59e-124 370
Msa0242820 MtrunA17_Chr2g0301091 43.256 430 239 4 17 444 23 449 1.05e-122 366
Msa0242820 MtrunA17_Chr2g0319881 56.725 171 73 1 19 189 10 179 7.37e-60 194
Msa0242820 MtrunA17_Chr8g0365901 24.574 411 265 14 53 452 65 441 3.03e-21 96.3
Msa0242820 MtrunA17_Chr7g0258111 27.529 425 235 17 46 444 41 418 9.52e-21 94.7
Msa0242820 MtrunA17_Chr6g0449961 26.498 317 194 10 45 355 37 320 1.89e-20 93.6
Msa0242820 MtrunA17_Chr3g0121891 24.515 412 246 13 16 414 2 361 5.85e-19 88.6
Msa0242820 MtrunA17_Chr5g0418411 26.220 328 186 10 54 364 30 318 7.08e-19 88.6
Msa0242820 MtrunA17_Chr5g0413141 25.153 326 194 11 44 351 47 340 3.07e-18 87.0
Msa0242820 MtrunA17_Chr7g0230891 25.061 407 241 16 54 441 38 399 1.38e-17 84.7
Msa0242820 MtrunA17_Chr1g0173451 21.220 410 260 11 39 429 58 423 1.60e-17 84.7
Msa0242820 MtrunA17_Chr6g0468871 42.857 77 44 0 246 322 22 98 6.80e-16 73.2
Msa0242820 MtrunA17_Chr6g0461181 23.356 441 262 16 49 444 27 436 1.45e-15 78.6
Msa0242820 MtrunA17_Chr5g0413411 23.864 352 194 10 44 355 110 427 1.78e-15 79.0
Msa0242820 MtrunA17_Chr4g0043661 24.252 301 187 10 54 346 24 291 1.19e-14 75.5
Msa0242820 MtrunA17_Chr1g0194231 26.019 319 191 10 53 355 81 370 1.96e-14 75.5
Msa0242820 MtrunA17_Chr4g0020771 23.273 275 187 4 166 429 168 429 2.03e-14 75.1
Msa0242820 MtrunA17_Chr8g0337571 25.402 311 183 10 55 355 33 304 2.50e-14 74.7
Msa0242820 MtrunA17_Chr4g0052621 27.492 331 185 13 47 355 55 352 2.97e-14 74.7
Msa0242820 MtrunA17_Chr3g0121881 23.961 409 250 14 52 441 32 398 1.24e-12 69.3
Msa0242820 MtrunA17_Chr8g0337581 23.077 442 262 16 16 438 2 384 1.98e-12 68.6
Msa0242820 MtrunA17_Chr3g0100091 24.096 332 224 7 112 438 33 341 3.46e-12 67.8
Msa0242820 MtrunA17_Chr2g0332801 28.643 199 118 5 166 355 157 340 3.95e-12 68.2
Msa0242820 MtrunA17_Chr2g0303941 24.444 405 250 14 52 441 27 390 7.95e-12 67.0
Msa0242820 MtrunA17_Chr7g0228411 23.305 472 266 16 12 439 7 426 1.33e-11 66.2
Msa0242820 MtrunA17_Chr3g0089021 23.003 313 210 7 132 429 128 424 1.36e-11 66.2
Msa0242820 MtrunA17_Chr6g0468861 46.429 56 30 0 359 414 14 69 3.32e-11 59.3
Msa0242820 MtrunA17_Chr4g0067631 22.438 361 229 10 16 355 5 335 4.21e-11 64.7
Msa0242820 MtrunA17_Chr2g0293681 25.225 333 196 12 43 356 57 355 4.82e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0242820 AT3G16850.1 64.009 439 151 3 19 456 5 437 0.0 581
Msa0242820 AT3G06770.2 63.699 438 153 3 19 450 3 440 0.0 564
Msa0242820 AT3G06770.5 63.554 439 154 3 18 450 3 441 0.0 564
Msa0242820 AT5G49215.1 65.617 413 140 2 34 444 24 436 0.0 551
Msa0242820 AT5G49215.2 65.617 413 140 2 34 444 22 434 0.0 551
Msa0242820 AT3G06770.1 65.135 370 129 0 81 450 2 371 3.38e-175 496
Msa0242820 AT3G06770.3 65.135 370 129 0 81 450 2 371 3.38e-175 496
Msa0242820 AT3G62110.1 56.030 398 173 2 49 444 39 436 5.80e-166 476
Msa0242820 AT3G62110.2 56.030 398 173 2 49 444 39 436 5.80e-166 476
Msa0242820 AT3G06770.4 60.704 341 134 0 110 450 13 353 3.71e-146 422
Msa0242820 AT3G48950.1 49.626 401 200 2 46 444 38 438 7.88e-146 425
Msa0242820 AT4G23820.1 48.492 431 212 3 19 444 6 431 2.83e-142 415
Msa0242820 AT4G23500.1 50.378 397 196 1 49 444 64 460 1.99e-141 415
Msa0242820 AT3G61490.2 47.859 397 206 1 49 444 41 437 1.32e-136 402
Msa0242820 AT3G61490.3 47.859 397 206 1 49 444 41 437 1.32e-136 402
Msa0242820 AT3G61490.1 47.859 397 206 1 49 444 41 437 1.32e-136 402
Msa0242820 AT3G61490.5 47.859 397 206 1 49 444 56 452 2.41e-136 402
Msa0242820 AT3G61490.4 47.859 397 206 1 49 444 154 550 2.18e-135 403
Msa0242820 AT2G23900.1 46.618 414 217 3 46 457 49 460 2.46e-132 391
Msa0242820 AT4G33440.1 47.529 425 220 2 34 456 51 474 1.19e-131 389
Msa0242820 AT5G41870.1 48.878 401 194 4 49 444 41 435 1.63e-129 383
Msa0242820 AT3G42950.1 41.191 403 233 3 44 444 59 459 4.20e-116 350
Msa0242820 AT1G19170.1 42.169 415 235 4 33 444 69 481 7.84e-114 345
Msa0242820 AT3G15720.3 27.470 415 251 16 51 452 21 398 8.00e-24 103
Msa0242820 AT3G15720.1 27.470 415 251 16 51 452 22 399 9.10e-24 103
Msa0242820 AT3G15720.2 27.470 415 248 17 51 452 21 395 5.05e-22 99.0
Msa0242820 AT1G70500.1 25.700 393 244 13 53 432 67 424 6.12e-21 95.5
Msa0242820 AT1G23460.1 25.564 399 247 15 53 437 67 429 8.92e-21 95.1
Msa0242820 AT1G23460.2 25.564 399 247 15 53 437 43 405 1.02e-20 94.7
Msa0242820 AT2G41850.1 26.434 401 248 13 50 439 65 429 1.20e-20 94.4
Msa0242820 AT3G57510.1 25.455 385 234 12 52 420 67 414 2.55e-20 93.6
Msa0242820 AT3G15720.4 27.922 308 191 10 156 452 48 335 6.46e-20 92.0
Msa0242820 AT3G57790.2 27.134 328 176 11 52 352 34 325 4.99e-18 87.0
Msa0242820 AT3G57790.1 27.134 328 176 11 52 352 34 325 4.99e-18 87.0
Msa0242820 AT3G26610.1 25.240 313 193 9 54 355 68 350 8.80e-17 83.2
Msa0242820 AT5G14650.1 24.601 313 193 10 52 355 50 328 1.30e-16 82.4
Msa0242820 AT5G17200.1 25.987 304 178 8 53 348 39 303 1.70e-16 81.6
Msa0242820 AT1G48100.1 28.037 321 176 14 55 355 82 367 4.81e-16 80.9
Msa0242820 AT3G07970.1 26.545 275 176 6 166 429 167 426 6.30e-16 80.1
Msa0242820 AT1G56710.1 25.625 320 197 9 50 355 45 337 4.93e-15 77.4
Msa0242820 AT2G15470.1 25.610 410 254 15 49 441 27 402 3.28e-14 74.7
Msa0242820 AT1G02790.1 26.074 349 212 11 50 391 49 358 1.26e-13 73.2
Msa0242820 AT1G02460.1 25.857 321 190 12 54 355 90 381 2.31e-13 72.4
Msa0242820 AT2G43860.1 24.939 409 253 16 48 441 28 397 2.83e-13 72.0
Msa0242820 AT2G15460.1 25.686 401 248 14 49 433 27 393 3.89e-13 71.2
Msa0242820 AT3G59850.1 23.821 403 255 13 51 440 21 384 4.35e-13 71.2
Msa0242820 AT2G43870.1 24.868 378 233 11 51 415 19 358 5.58e-13 70.9
Msa0242820 AT3G59850.2 23.441 401 259 11 51 440 65 428 6.63e-13 70.9
Msa0242820 AT2G15450.1 25.245 408 255 14 49 440 27 400 8.64e-13 70.5
Msa0242820 AT1G17150.1 24.331 411 251 13 49 440 29 398 1.10e-12 70.1
Msa0242820 AT2G43880.1 23.383 402 258 15 52 441 30 393 2.70e-12 68.6
Msa0242820 AT5G14650.2 26.009 223 139 7 52 269 50 251 2.91e-12 67.8
Msa0242820 AT1G80170.1 24.213 413 258 14 49 441 46 423 4.24e-12 68.6
Msa0242820 AT1G43080.1 23.133 415 262 16 49 443 27 404 4.41e-12 68.2
Msa0242820 AT2G40310.1 24.455 413 255 16 49 441 27 402 7.47e-12 67.4
Msa0242820 AT4G13760.1 24.578 415 252 16 49 441 27 402 3.60e-11 65.5
Msa0242820 AT1G43100.1 23.134 402 253 15 49 431 27 391 4.91e-11 65.1
Msa0242820 AT1G43090.1 23.134 402 253 15 49 431 27 391 5.51e-11 65.1
Msa0242820 AT4G01890.1 25.000 328 182 12 55 355 67 357 6.38e-11 64.7
Msa0242820 AT3G14040.1 25.329 304 210 9 151 447 150 443 6.54e-11 64.7

Find 130 sgRNAs with CRISPR-Local

Find 681 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCCGTTTCTTCAAGTAAA+TGG 0.088505 2_2:+19295093 Msa0242820:CDS
GTACAAATAATGACCTATTT+TGG 0.177613 2_2:-19295496 None:intergenic
AGCAATGCCGTGAATGTTTA+TGG 0.195198 2_2:+19292754 Msa0242820:CDS
ATTCATGTGTAATGAAATTT+TGG 0.199629 2_2:+19295533 Msa0242820:three_prime_UTR
ATTCTTGCATATTCCAAAAT+AGG 0.253449 2_2:+19295483 Msa0242820:three_prime_UTR
ATGTCGTTTGAATCCTAAAT+TGG 0.263811 2_2:+19292789 Msa0242820:CDS
ATTGAAGCTTTACCTTCTTA+TGG 0.264280 2_2:+19293593 Msa0242820:CDS
CTTCTGTAGGAGACCTATTA+AGG 0.267608 2_2:-19285217 None:intergenic
GGTACTATACCGGCAGTATA+AGG 0.271970 2_2:-19294104 None:intergenic
ATTTCAGCTAAAGGTAATTC+TGG 0.272185 2_2:+19294906 Msa0242820:CDS
TTATGAGCAAGAATCAAATT+TGG 0.285483 2_2:-19295323 None:intergenic
TGCAAAAGTGGAAGTGCTTT+TGG 0.294030 2_2:-19294954 None:intergenic
ATTATTTACCTGCAATAAAC+AGG 0.300438 2_2:-19293954 None:intergenic
TCATTTGCCAATTGAGAATA+GGG 0.301752 2_2:+19295390 Msa0242820:three_prime_UTR
AGTGTCTCTATATTGGAATT+TGG 0.306110 2_2:+19292826 Msa0242820:CDS
CCACCAGGAAACTGGCTTAC+TGG 0.322724 2_2:+19292949 Msa0242820:CDS
TATGTAACCACCTCTTCCTT+TGG 0.328460 2_2:-19294835 None:intergenic
TGAGATAGAAAATTGCATTC+TGG 0.331713 2_2:-19292888 None:intergenic
TGTGGCCTAGGATCCAATTT+AGG 0.332220 2_2:-19292802 None:intergenic
GATCAGTACGGCATTAAATA+TGG 0.336655 2_2:+19294654 Msa0242820:CDS
GCCACACAGTGTCTCTATAT+TGG 0.338491 2_2:+19292819 Msa0242820:CDS
TTGGAAGATGTGGTCATAAC+AGG 0.339246 2_2:+19293671 Msa0242820:CDS
CCGGCAGTATAAGGGGATTC+TGG 0.339380 2_2:-19294095 None:intergenic
GTTCATCTTCGTGCATTTAC+CGG 0.342309 2_2:+19294708 Msa0242820:CDS
TCTCAAGTCATTTGCTGATA+AGG 0.351226 2_2:+19292906 Msa0242820:CDS
ACCGGCTCTGCTATTTCATT+TGG 0.351598 2_2:+19294726 Msa0242820:CDS
GGAAAGAATATCACAATTGC+TGG 0.353969 2_2:+19295002 Msa0242820:CDS
AAATGTTAACATGCTCTATC+AGG 0.358232 2_2:-19294779 None:intergenic
GGCAATAATGGAACCATTGA+TGG 0.360386 2_2:+19293792 Msa0242820:intron
GTACTATACCGGCAGTATAA+GGG 0.366594 2_2:-19294103 None:intergenic
TATGCAAGAATTGAAATCTA+AGG 0.368433 2_2:-19295471 None:intergenic
TTTGGATCAAATTTGTCATC+AGG 0.370603 2_2:-19294936 None:intergenic
ATGGAATGGTTTGGTGGGAC+TGG 0.373444 2_2:+19293817 Msa0242820:CDS
GATGAGGACGACTGTGGTTA+AGG 0.378902 2_2:-19293854 None:intergenic
TCTATGTGCCACCAGGAAAC+TGG 0.379700 2_2:+19292941 Msa0242820:CDS
TGCTTTATCACACATAGAAA+TGG 0.384138 2_2:+19294866 Msa0242820:CDS
TTCCGTTTCTTCAAGTAAAT+GGG 0.384317 2_2:+19295094 Msa0242820:CDS
GTCATTTGCCAATTGAGAAT+AGG 0.393303 2_2:+19295389 Msa0242820:three_prime_UTR
TATACAGCAATTTCAGCTAA+AGG 0.395099 2_2:+19294897 Msa0242820:CDS
TGCTGTCATTATTGGATCTC+AGG 0.395803 2_2:+19293017 Msa0242820:CDS
TTTCGGTGGAAGGCCTTAAT+AGG 0.398824 2_2:+19285204 Msa0242820:CDS
CTTATATGTACTTTCTCACT+TGG 0.401622 2_2:-19294681 None:intergenic
CCAAGTTCTTGACAAGGTTT+AGG 0.403560 2_2:-19295155 None:intergenic
ATAACATTGAAGGATATAAC+TGG 0.408428 2_2:+19294981 Msa0242820:CDS
GCATCCACCCTGTTTATTGC+AGG 0.409422 2_2:+19293946 Msa0242820:CDS
AAATAGTGATTTAAGATTGT+AGG 0.410370 2_2:-19295727 None:intergenic
AACCATTCCATTGCCATCAA+TGG 0.414602 2_2:-19293805 None:intergenic
AGATACAAGAGCTTGATAAA+TGG 0.415928 2_2:+19293641 Msa0242820:CDS
CTCAAGTCATTTGCTGATAA+GGG 0.419974 2_2:+19292907 Msa0242820:CDS
CCTAAACCTTGTCAAGAACT+TGG 0.423904 2_2:+19295155 Msa0242820:CDS
TGAATCCTAAATTGGATCCT+AGG 0.429800 2_2:+19292797 Msa0242820:CDS
TTTGGTAGTGCCTTTACAAA+AGG 0.429852 2_2:+19295551 Msa0242820:three_prime_UTR
TTCCCATTTACTTGAAGAAA+CGG 0.430980 2_2:-19295096 None:intergenic
GAATGTACCCTATTCTCAAT+TGG 0.432022 2_2:-19295397 None:intergenic
TGTAAAGCATGTAGTGGATT+TGG 0.434938 2_2:+19295630 Msa0242820:three_prime_UTR
ATATTGGAATTTGGTGCAGT+TGG 0.436498 2_2:+19292835 Msa0242820:CDS
TTTGCATCACATAACATTGA+AGG 0.443614 2_2:+19294971 Msa0242820:CDS
CTACCAGTAAGCCAGTTTCC+TGG 0.448344 2_2:-19292952 None:intergenic
ATAGAGACACTGTGTGGCCT+AGG 0.453912 2_2:-19292814 None:intergenic
GACGCAATTTCTCTCAAAAG+TGG 0.454842 2_2:+19294627 Msa0242820:CDS
TTGTTTAGGATCCATCTCAT+TGG 0.466913 2_2:+19293564 Msa0242820:intron
TTATGACCACATCTTCCAAC+TGG 0.467822 2_2:-19293667 None:intergenic
ATGAGGACGACTGTGGTTAA+GGG 0.472010 2_2:-19293853 None:intergenic
GAAGATTGTTATGTTTCCAT+TGG 0.475742 2_2:+19294600 Msa0242820:CDS
TTAAGGCCTTCCACCGAAAA+CGG 0.477264 2_2:-19285200 None:intergenic
GTGAGAAAGTACATATAAGA+AGG 0.477334 2_2:+19294685 Msa0242820:CDS
ATGGGAATGTTCAAATGTCT+CGG 0.480367 2_2:+19295112 Msa0242820:CDS
TCATTTGGTACTGAAATGTC+TGG 0.487250 2_2:+19294741 Msa0242820:CDS
AGAATCAAATTTGGTATCCA+AGG 0.488955 2_2:-19295314 None:intergenic
GTGCGAGTGTTGTAAATCCT+TGG 0.493743 2_2:+19295297 Msa0242820:three_prime_UTR
AAGCTCTTGTATCTTCCGTC+AGG 0.495493 2_2:-19293632 None:intergenic
AATAGGTCTCCTACAGAAGA+AGG 0.496370 2_2:+19285221 Msa0242820:CDS
TAGACAAGGTTATATTTGAA+AGG 0.499579 2_2:-19295067 None:intergenic
AACATCTCCATAAACATTCA+CGG 0.500990 2_2:-19292761 None:intergenic
CAATTTCTCTCAAAAGTGGA+TGG 0.507018 2_2:+19294631 Msa0242820:CDS
ATAAACTGTTCTCAAAACAC+TGG 0.508700 2_2:+19295250 Msa0242820:exon
GATGACGAAGAAGAATTTGA+AGG 0.513232 2_2:-19295182 None:intergenic
TGGGAATGTTCAAATGTCTC+GGG 0.517276 2_2:+19295113 Msa0242820:CDS
ACCAAATGAAATAGCAGAGC+CGG 0.517644 2_2:-19294727 None:intergenic
AATGGAACCATTGATGGCAA+TGG 0.521099 2_2:+19293798 Msa0242820:CDS
TCTTTCCCTCGGCCATAAGA+AGG 0.523156 2_2:-19293605 None:intergenic
AATGTTATGTGATGCAAAAG+TGG 0.524613 2_2:-19294966 None:intergenic
TCAATAACATTCCAATGAGA+TGG 0.528619 2_2:-19293575 None:intergenic
AAACACTGGATTGGCGTAAG+TGG 0.534015 2_2:+19295264 Msa0242820:three_prime_UTR
CCAGAATCCCCTTATACTGC+CGG 0.534389 2_2:+19294095 Msa0242820:CDS
ATTGAAATCTAAGGAATGAA+AGG 0.541989 2_2:-19295462 None:intergenic
GCTTTACCTTCTTATGGCCG+AGG 0.543091 2_2:+19293599 Msa0242820:CDS
ACAATTGCTGGAAGCTTGAG+TGG 0.543463 2_2:+19295014 Msa0242820:CDS
TTTCACTGTAAAGCATGTAG+TGG 0.545854 2_2:+19295624 Msa0242820:three_prime_UTR
AAAACCATGCCTTCTTCTGT+AGG 0.546781 2_2:-19285230 None:intergenic
CTTGATAAATGGTAACCAGT+TGG 0.546984 2_2:+19293652 Msa0242820:CDS
TGGTAACCAGTTGGAAGATG+TGG 0.548355 2_2:+19293661 Msa0242820:CDS
CGTCAGGAACATCTTTCCCT+CGG 0.553651 2_2:-19293616 None:intergenic
ACAGGGTGGATGCTATATGC+TGG 0.557217 2_2:-19293936 None:intergenic
AGAAATTGCGTCAAAACCAA+TGG 0.560982 2_2:-19294616 None:intergenic
TTCAGAACAACCAAAGGAAG+AGG 0.562716 2_2:+19294825 Msa0242820:CDS
TTACTAACCTGGTACTATAC+CGG 0.564112 2_2:-19294114 None:intergenic
ATGGCAATGGAATGGTTTGG+TGG 0.564149 2_2:+19293811 Msa0242820:CDS
GAATTTGGTGCAGTTGGAGA+TGG 0.565909 2_2:+19292841 Msa0242820:CDS
CTGTTCTCAAAACACTGGAT+TGG 0.573682 2_2:+19295255 Msa0242820:three_prime_UTR
TGGCAATGGAATGGTTTGGT+GGG 0.576997 2_2:+19293812 Msa0242820:CDS
TTGATGGCAATGGAATGGTT+TGG 0.583352 2_2:+19293808 Msa0242820:CDS
ATGACGAAGAAGAATTTGAA+GGG 0.583947 2_2:-19295181 None:intergenic
TACTATACCGGCAGTATAAG+GGG 0.586797 2_2:-19294102 None:intergenic
TGAGAAAGTACATATAAGAA+GGG 0.590695 2_2:+19294686 Msa0242820:CDS
AGAAACGGAATTTGTAGACA+AGG 0.591928 2_2:-19295081 None:intergenic
CTTTACCTTCTTATGGCCGA+GGG 0.592122 2_2:+19293600 Msa0242820:CDS
TGAAAGGCATATGTTTGTGA+AGG 0.592606 2_2:-19295051 None:intergenic
GTCTCCTACAGAAGAAGGCA+TGG 0.592818 2_2:+19285226 Msa0242820:CDS
GATATAATTTCAACGAGATG+AGG 0.595103 2_2:-19293870 None:intergenic
GCTCAGCTCTATGTGCCACC+AGG 0.597340 2_2:+19292934 Msa0242820:CDS
TATACTGCCGGTATAGTACC+AGG 0.604603 2_2:+19294107 Msa0242820:CDS
TGTTACTACCTCATGAGTCT+CGG 0.607492 2_2:+19295206 Msa0242820:CDS
AATTTCTCTCAAAAGTGGAT+GGG 0.608979 2_2:+19294632 Msa0242820:CDS
AACCATTGATGGCAATGGAA+TGG 0.612706 2_2:+19293803 Msa0242820:CDS
AAAAGTGGATGGGATCAGTA+CGG 0.626304 2_2:+19294642 Msa0242820:CDS
TTTGGTACTGAAATGTCTGG+TGG 0.627310 2_2:+19294744 Msa0242820:CDS
GAAAGGCATATGTTTGTGAA+GGG 0.628625 2_2:-19295050 None:intergenic
GGGTTACCAAGTTCTTGACA+AGG 0.644208 2_2:-19295161 None:intergenic
CGAGGGAAAGATGTTCCTGA+CGG 0.645144 2_2:+19293617 Msa0242820:CDS
ATTGAGTTCAGAACAACCAA+AGG 0.651524 2_2:+19294819 Msa0242820:CDS
AGAACAACCAAAGGAAGAGG+TGG 0.657978 2_2:+19294828 Msa0242820:CDS
ACTGGATTGGCGTAAGTGGT+TGG 0.658298 2_2:+19295268 Msa0242820:three_prime_UTR
AAGTCATTTGCTGATAAGGG+TGG 0.660065 2_2:+19292910 Msa0242820:CDS
CAACGAGATGAGGACGACTG+TGG 0.660908 2_2:-19293860 None:intergenic
TTATTTACCTGCAATAAACA+GGG 0.669198 2_2:-19293953 None:intergenic
TTTACCTGCAATAAACAGGG+TGG 0.674542 2_2:-19293950 None:intergenic
GCAGTATAAGGGGATTCTGG+AGG 0.680237 2_2:-19294092 None:intergenic
TCCAATATAGAGACACTGTG+TGG 0.732684 2_2:-19292820 None:intergenic
CCAGTAAGCCAGTTTCCTGG+TGG 0.733343 2_2:-19292949 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAATTTATATT+TGG - chr2_2:19288890-19288909 None:intergenic 0.0%
!! ATAATAATAATATGAATCAT+TGG + chr2_2:19285262-19285281 Msa0242820:intron 10.0%
!!! TGAATTTTTTTTTTTTGAAT+CGG + chr2_2:19285544-19285563 Msa0242820:intron 10.0%
!! TATAAATAAAACAAATCAAA+AGG + chr2_2:19286144-19286163 Msa0242820:intron 10.0%
!!! AATTTTACTAATTTAATAAC+AGG - chr2_2:19288104-19288123 None:intergenic 10.0%
!! AAACAAACATATAAAATATT+TGG - chr2_2:19288259-19288278 None:intergenic 10.0%
!! GTAAAATTATTAATACATAT+AGG - chr2_2:19288338-19288357 None:intergenic 10.0%
!! ATATTTGCATATTAAAAAAA+TGG + chr2_2:19289289-19289308 Msa0242820:intron 10.0%
!! AACTAAAATTGAATTAAAAA+TGG + chr2_2:19289990-19290009 Msa0242820:intron 10.0%
!! ACTAAAATTGAATTAAAAAT+GGG + chr2_2:19289991-19290010 Msa0242820:intron 10.0%
!! AAGAGAATATAATATTTATA+TGG - chr2_2:19290674-19290693 None:intergenic 10.0%
!! TATTATTAGACTATAATAAT+TGG + chr2_2:19291388-19291407 Msa0242820:intron 10.0%
!!! TTGAAACTTTTAAAACATAA+GGG - chr2_2:19287633-19287652 None:intergenic 15.0%
!!! TTTGAAACTTTTAAAACATA+AGG - chr2_2:19287634-19287653 None:intergenic 15.0%
!!! ATGTTTTAAAAGTTTCAAAT+TGG + chr2_2:19287635-19287654 Msa0242820:intron 15.0%
!! TTATTAAACTCAATATTACA+TGG - chr2_2:19287731-19287750 None:intergenic 15.0%
!! AATAAAAAAAATTGACTAAC+TGG + chr2_2:19288008-19288027 Msa0242820:intron 15.0%
!! TTTAAACTAGTGTATTTATT+TGG - chr2_2:19288575-19288594 None:intergenic 15.0%
!! AAAATAAAACAATTAAGTGT+TGG + chr2_2:19288597-19288616 Msa0242820:intron 15.0%
!! TATAAATGAATATGAACTAT+CGG - chr2_2:19288668-19288687 None:intergenic 15.0%
!! CATATTCATTTATAAAACTT+CGG + chr2_2:19288674-19288693 Msa0242820:intron 15.0%
!! CTTAATAGTATTCTAATAAT+AGG - chr2_2:19289442-19289461 None:intergenic 15.0%
!! CTATTATTAGAATACTATTA+AGG + chr2_2:19289440-19289459 Msa0242820:intron 15.0%
!! ATAACTATTCCTAATTAATA+AGG + chr2_2:19289531-19289550 Msa0242820:intron 15.0%
!! TATCATTAACCTTATTAATT+AGG - chr2_2:19289543-19289562 None:intergenic 15.0%
!!! TAAGAAAAAGGTATAAATAA+AGG + chr2_2:19289781-19289800 Msa0242820:intron 15.0%
!!! AAGAAAAAGGTATAAATAAA+GGG + chr2_2:19289782-19289801 Msa0242820:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr2_2:19289846-19289865 Msa0242820:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr2_2:19289847-19289866 Msa0242820:intron 15.0%
!!! CTATTATAGTATCATTTTTT+TGG + chr2_2:19290293-19290312 Msa0242820:intron 15.0%
!!! TCAATAGTTTTCTATTATTA+TGG + chr2_2:19290382-19290401 Msa0242820:intron 15.0%
!!! TATTTTCAAATTACATTTCA+TGG - chr2_2:19290417-19290436 None:intergenic 15.0%
!! ATAAATTAATTAGCACTAAT+TGG - chr2_2:19291287-19291306 None:intergenic 15.0%
!! ACTTCAACAAAAATATTATA+AGG - chr2_2:19292360-19292379 None:intergenic 15.0%
!!! TTTTTCATTTAATTTTTACC+AGG + chr2_2:19293771-19293790 Msa0242820:intron 15.0%
!! ATGATATAATTGAATATACT+CGG - chr2_2:19294405-19294424 None:intergenic 15.0%
!!! TCATTTTTCAAATAATTACT+AGG + chr2_2:19294421-19294440 Msa0242820:intron 15.0%
!!! CATTTTTCAAATAATTACTA+GGG + chr2_2:19294422-19294441 Msa0242820:intron 15.0%
!! ATAATATGAATCATTGGATA+AGG + chr2_2:19285268-19285287 Msa0242820:intron 20.0%
!! TAATATGAATCATTGGATAA+GGG + chr2_2:19285269-19285288 Msa0242820:intron 20.0%
!! ATATAAAATTTACCACGAAT+CGG + chr2_2:19285439-19285458 Msa0242820:intron 20.0%
!! TACAGTACAAATATCTTAAT+GGG + chr2_2:19285462-19285481 Msa0242820:intron 20.0%
!! AAAACAAATCAAAAGGAAAA+AGG + chr2_2:19286151-19286170 Msa0242820:intron 20.0%
!! GACAGTTAAAATAAACATAA+AGG - chr2_2:19287602-19287621 None:intergenic 20.0%
!!! ATGTTTTAAAAGTATCAAGT+TGG - chr2_2:19287892-19287911 None:intergenic 20.0%
!!! CTTGATACTTTTAAAACATA+AGG + chr2_2:19287893-19287912 Msa0242820:intron 20.0%
!!! ATGTTTTAAACATTTCAAGT+TGG - chr2_2:19287921-19287940 None:intergenic 20.0%
!!! AATAAACATTTTTAAGTTCC+CGG + chr2_2:19288061-19288080 Msa0242820:intron 20.0%
!! TTAAGATGTTTATGTTAGAT+AGG - chr2_2:19288208-19288227 None:intergenic 20.0%
!! CAATAAAATCAAAGTAGATA+TGG - chr2_2:19288235-19288254 None:intergenic 20.0%
!! TAAAAAAAAAATTGACTGAC+TGG - chr2_2:19288366-19288385 None:intergenic 20.0%
!!! TCTAGTTAGAAGTATAATTA+AGG - chr2_2:19288546-19288565 None:intergenic 20.0%
!!! TAGTAAGTCTTTTATTTCAA+AGG + chr2_2:19288627-19288646 Msa0242820:intron 20.0%
!! AAAACTGTGTCAATTAAATT+GGG - chr2_2:19289746-19289765 None:intergenic 20.0%
!! TTTCACACATATTAAGAAAA+AGG + chr2_2:19289769-19289788 Msa0242820:intron 20.0%
!!! AGAAAAAGGTATAAATAAAG+GGG + chr2_2:19289783-19289802 Msa0242820:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr2_2:19289916-19289935 Msa0242820:intron 20.0%
!! AATGAAAACAAATAAGTTAG+AGG - chr2_2:19290200-19290219 None:intergenic 20.0%
!! TATTTATAACCAACAATGAT+AGG + chr2_2:19290469-19290488 Msa0242820:intron 20.0%
!! ATTTGACATTATATAGATAG+TGG + chr2_2:19290508-19290527 Msa0242820:intron 20.0%
!!! TACTAATCATTTTCATTAAC+AGG + chr2_2:19291253-19291272 Msa0242820:intron 20.0%
!! TAAATAGAATACTCTACTTA+AGG - chr2_2:19291343-19291362 None:intergenic 20.0%
!! TTCATATACGTACAAATATT+TGG - chr2_2:19291696-19291715 None:intergenic 20.0%
!! AATATTTGTACGTATATGAA+AGG + chr2_2:19291696-19291715 Msa0242820:intron 20.0%
!!! TTGCTTTGTTTTTCATTTTA+AGG + chr2_2:19292062-19292081 Msa0242820:intron 20.0%
!!! TGCTTTGTTTTTCATTTTAA+GGG + chr2_2:19292063-19292082 Msa0242820:intron 20.0%
!!! TTTTTGTGTTTTGTTCATAT+GGG + chr2_2:19292135-19292154 Msa0242820:intron 20.0%
!! TCATACATAAAATTTGAACA+TGG - chr2_2:19292161-19292180 None:intergenic 20.0%
!! ATCAATATATCAGATCAAAA+TGG - chr2_2:19292264-19292283 None:intergenic 20.0%
!! ATCTTTGAATGTATTGAAAT+TGG + chr2_2:19293128-19293147 Msa0242820:intron 20.0%
!! TCTTTGAATGTATTGAAATT+GGG + chr2_2:19293129-19293148 Msa0242820:intron 20.0%
!!! AATTATATCATCTGATTTTG+TGG + chr2_2:19293884-19293903 Msa0242820:CDS 20.0%
!! TTCTTCTTTGATACTTAATT+TGG + chr2_2:19293987-19294006 Msa0242820:intron 20.0%
!! TTACCATCTCAAATAATTAT+CGG - chr2_2:19294307-19294326 None:intergenic 20.0%
!!! ATGAACAACTTGTTTTATTT+TGG - chr2_2:19295426-19295445 None:intergenic 20.0%
!!! ATTCATGTGTAATGAAATTT+TGG + chr2_2:19295533-19295552 Msa0242820:three_prime_UTR 20.0%
!! GTATCTTGCATACAAAATTT+TGG - chr2_2:19285415-19285434 None:intergenic 25.0%
!! TTCGTGGTAAATTTTATATG+CGG - chr2_2:19285438-19285457 None:intergenic 25.0%
! GTACAGTACAAATATCTTAA+TGG + chr2_2:19285461-19285480 Msa0242820:intron 25.0%
!!! GTATGTGAGTTTTATTTTGA+GGG - chr2_2:19285789-19285808 None:intergenic 25.0%
!!! TTTGAATCAAGTTGGTTTTT+GGG - chr2_2:19285909-19285928 None:intergenic 25.0%
!!! ATTTTAGTACCAAATTAGCA+GGG + chr2_2:19285972-19285991 Msa0242820:intron 25.0%
!!! AATCTATGTTTGACTTGATA+TGG - chr2_2:19286029-19286048 None:intergenic 25.0%
!! TTATTTTCTACCTTCATTGT+GGG - chr2_2:19286924-19286943 None:intergenic 25.0%
!!! TTTATTTTCTACCTTCATTG+TGG - chr2_2:19286925-19286944 None:intergenic 25.0%
! AAGAAGAAAACATCACAAAA+TGG + chr2_2:19287061-19287080 Msa0242820:intron 25.0%
! GATGAAATTAATTGCATGTT+TGG + chr2_2:19287575-19287594 Msa0242820:intron 25.0%
!!! GTTTATTTTAACTGTCAAGT+TGG + chr2_2:19287606-19287625 Msa0242820:intron 25.0%
! TTGAAACGTTTAAACCATAA+AGG - chr2_2:19287662-19287681 None:intergenic 25.0%
!! TTCAACTATGAGTAATGTTT+TGG - chr2_2:19287691-19287710 None:intergenic 25.0%
! TCTTAACCTATATCTCTAAA+CGG + chr2_2:19287818-19287837 Msa0242820:intron 25.0%
!!! GTTTATTTTAGGTTTCATGT+AGG - chr2_2:19287950-19287969 None:intergenic 25.0%
! TGAAACCTAAAATAAACACA+AGG + chr2_2:19287953-19287972 Msa0242820:intron 25.0%
!!! TGACGATGAGATTTTTATTT+AGG - chr2_2:19288144-19288163 None:intergenic 25.0%
! ATGTGCATGTATTAATTTAC+AGG + chr2_2:19288410-19288429 Msa0242820:intron 25.0%
! AAATAAAATTTACCACGAGT+CGG - chr2_2:19288492-19288511 None:intergenic 25.0%
!!! ATAACTTGCATACAGAATTT+TGG + chr2_2:19288516-19288535 Msa0242820:intron 25.0%
!!! TCTCCTACTATTTTTGTTTT+TGG + chr2_2:19288735-19288754 Msa0242820:intron 25.0%
! ATTTATATTTGGATACTCTC+CGG - chr2_2:19288879-19288898 None:intergenic 25.0%
! AATATTGACGATTAAGATAG+TGG - chr2_2:19289218-19289237 None:intergenic 25.0%
! CAAAAAATCAAGATACGATA+CGG - chr2_2:19289367-19289386 None:intergenic 25.0%
! AATGGTATAAAACTCACTTT+CGG - chr2_2:19289480-19289499 None:intergenic 25.0%
! CAAAACTGTGTCAATTAAAT+TGG - chr2_2:19289747-19289766 None:intergenic 25.0%
!! TTGAAATGAGACAGTTATTT+TGG + chr2_2:19289893-19289912 Msa0242820:intron 25.0%
!!! TGAAATGAGACAGTTATTTT+GGG + chr2_2:19289894-19289913 Msa0242820:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr2_2:19289915-19289934 Msa0242820:intron 25.0%
! ATACTCTATCCTTCATTTAA+TGG + chr2_2:19290749-19290768 Msa0242820:intron 25.0%
! TTATGTTCTCCATTAAATGA+AGG - chr2_2:19290761-19290780 None:intergenic 25.0%
!! ATTTGTAAGATTCTGATTTG+TGG - chr2_2:19291024-19291043 None:intergenic 25.0%
! CACTAATGCATTATTAATGT+TGG - chr2_2:19291449-19291468 None:intergenic 25.0%
!!! TTGCTGTCATTTTTTTACAT+TGG + chr2_2:19291737-19291756 Msa0242820:intron 25.0%
!!! TTTGTTACTTGTTTTTGTGT+TGG + chr2_2:19291872-19291891 Msa0242820:intron 25.0%
!!! TCTCTTCAAGTTTTGATTTT+TGG + chr2_2:19292086-19292105 Msa0242820:intron 25.0%
!!! TTCAAGTTTTGATTTTTGGT+TGG + chr2_2:19292090-19292109 Msa0242820:intron 25.0%
!!! GTTTTTGTGTTTTGTTCATA+TGG + chr2_2:19292134-19292153 Msa0242820:intron 25.0%
!!! ATGTATGAGATTTGTTCTTT+TGG + chr2_2:19292173-19292192 Msa0242820:intron 25.0%
!!! TGTATGAGATTTGTTCTTTT+GGG + chr2_2:19292174-19292193 Msa0242820:intron 25.0%
!!! GTTTTTTTGTTCCTTTTGTT+TGG + chr2_2:19292196-19292215 Msa0242820:intron 25.0%
!!! TTTCTATGTCGTTTTAAATC+TGG + chr2_2:19292658-19292677 Msa0242820:intron 25.0%
!!! TTCTATGTCGTTTTAAATCT+GGG + chr2_2:19292659-19292678 Msa0242820:intron 25.0%
! ACTAACAAAATTCTTACTCA+GGG - chr2_2:19293162-19293181 None:intergenic 25.0%
!! CCATGAGTAAAAAATCATTT+TGG - chr2_2:19293317-19293336 None:intergenic 25.0%
!!! CCAAAATGATTTTTTACTCA+TGG + chr2_2:19293314-19293333 Msa0242820:intron 25.0%
! AATTGTGTATTGTTCCTATT+TGG + chr2_2:19293374-19293393 Msa0242820:intron 25.0%
! GCTATATTATTATAGCGTAT+CGG + chr2_2:19293430-19293449 Msa0242820:intron 25.0%
!! TAATTTTTACCAGGCAATAA+TGG + chr2_2:19293780-19293799 Msa0242820:intron 25.0%
! TTATTTACCTGCAATAAACA+GGG - chr2_2:19293956-19293975 None:intergenic 25.0%
! ATTATTTACCTGCAATAAAC+AGG - chr2_2:19293957-19293976 None:intergenic 25.0%
! TAATTTGGCAGACAAAATTA+AGG + chr2_2:19294002-19294021 Msa0242820:intron 25.0%
! AATTTGGCAGACAAAATTAA+GGG + chr2_2:19294003-19294022 Msa0242820:intron 25.0%
! CTTTAATATGTTTACTAACC+TGG - chr2_2:19294128-19294147 None:intergenic 25.0%
! ATACCGATAATTATTTGAGA+TGG + chr2_2:19294301-19294320 Msa0242820:intron 25.0%
!! TGAGAAAGTACATATAAGAA+GGG + chr2_2:19294686-19294705 Msa0242820:CDS 25.0%
!! AACATTTTCAACTCAAATAG+TGG + chr2_2:19294795-19294814 Msa0242820:CDS 25.0%
! ATAACATTGAAGGATATAAC+TGG + chr2_2:19294981-19295000 Msa0242820:CDS 25.0%
! TAGACAAGGTTATATTTGAA+AGG - chr2_2:19295070-19295089 None:intergenic 25.0%
! TTATGAGCAAGAATCAAATT+TGG - chr2_2:19295326-19295345 None:intergenic 25.0%
! ATTGAAATCTAAGGAATGAA+AGG - chr2_2:19295465-19295484 None:intergenic 25.0%
! TATGCAAGAATTGAAATCTA+AGG - chr2_2:19295474-19295493 None:intergenic 25.0%
! ATTCTTGCATATTCCAAAAT+AGG + chr2_2:19295483-19295502 Msa0242820:three_prime_UTR 25.0%
!! GTACAAATAATGACCTATTT+TGG - chr2_2:19295499-19295518 None:intergenic 25.0%
!! TAGTAAGCATTTTAGTCCAA+GGG - chr2_2:19285303-19285322 None:intergenic 30.0%
!! ATAGTAAGCATTTTAGTCCA+AGG - chr2_2:19285304-19285323 None:intergenic 30.0%
! TCGTGGTAAATTTTATATGC+GGG - chr2_2:19285437-19285456 None:intergenic 30.0%
ATCTACTAATTTACTGGTAC+TGG - chr2_2:19285513-19285532 None:intergenic 30.0%
ATGTGCATCTACTAATTTAC+TGG - chr2_2:19285519-19285538 None:intergenic 30.0%
! TTATCTTCAGGGATGTTTTT+AGG - chr2_2:19285661-19285680 None:intergenic 30.0%
!! TGTTTACAGTGCTTGTTTTT+GGG - chr2_2:19285721-19285740 None:intergenic 30.0%
!!! TTATTTTGAGGGTGTTCTTT+GGG - chr2_2:19285778-19285797 None:intergenic 30.0%
!!! TTTATTTTGAGGGTGTTCTT+TGG - chr2_2:19285779-19285798 None:intergenic 30.0%
!!! GGTATGTGAGTTTTATTTTG+AGG - chr2_2:19285790-19285809 None:intergenic 30.0%
!!! GTTTTTGTTTTGTGCTCTTT+CGG - chr2_2:19285887-19285906 None:intergenic 30.0%
!!! CTTTGAATCAAGTTGGTTTT+TGG - chr2_2:19285910-19285929 None:intergenic 30.0%
ATTTGGTACTAAAATCTGGT+GGG - chr2_2:19285967-19285986 None:intergenic 30.0%
AATTTGGTACTAAAATCTGG+TGG - chr2_2:19285968-19285987 None:intergenic 30.0%
GCTAATTTGGTACTAAAATC+TGG - chr2_2:19285971-19285990 None:intergenic 30.0%
!! GATTTTAGTACCAAATTAGC+AGG + chr2_2:19285971-19285990 Msa0242820:intron 30.0%
AATATGTAAGACGAAAGACA+TGG + chr2_2:19286112-19286131 Msa0242820:intron 30.0%
CAACACAAACATAAATCTAG+AGG + chr2_2:19286460-19286479 Msa0242820:intron 30.0%
ACACAACCCAAATCATTAAA+AGG + chr2_2:19286535-19286554 Msa0242820:intron 30.0%
!!! GAATTTTTTTGGGTCCTTTT+GGG - chr2_2:19286645-19286664 None:intergenic 30.0%
!!! AGAATTTTTTTGGGTCCTTT+TGG - chr2_2:19286646-19286665 None:intergenic 30.0%
AAAAGGACCCAAAAAAATTC+TGG + chr2_2:19286645-19286664 Msa0242820:intron 30.0%
!!! TGTACCTCCAGAATTTTTTT+GGG - chr2_2:19286655-19286674 None:intergenic 30.0%
!!! ATGTACCTCCAGAATTTTTT+TGG - chr2_2:19286656-19286675 None:intergenic 30.0%
! CAGATGAAACAGAACTTTTA+AGG + chr2_2:19286752-19286771 Msa0242820:intron 30.0%
! TGTTCTTAACTCGAGTTTTA+TGG - chr2_2:19286985-19287004 None:intergenic 30.0%
AGTTTCAAATTGGTCCTTTA+TGG + chr2_2:19287645-19287664 Msa0242820:intron 30.0%
! ATGGTTTAAACGTTTCAAGT+CGG + chr2_2:19287664-19287683 Msa0242820:intron 30.0%
CTCAATATTACATGGTTGAA+GGG - chr2_2:19287723-19287742 None:intergenic 30.0%
ACTCAATATTACATGGTTGA+AGG - chr2_2:19287724-19287743 None:intergenic 30.0%
! ACTTTTCCGTTTAGAGATAT+AGG - chr2_2:19287827-19287846 None:intergenic 30.0%
!! TAGTGCCTTGTGTTTATTTT+AGG - chr2_2:19287961-19287980 None:intergenic 30.0%
TCGTCATTAACAAAAGATGA+TGG + chr2_2:19288158-19288177 Msa0242820:intron 30.0%
CACATGCAGATGAAATTAAT+AGG - chr2_2:19287567-19287586 None:intergenic 30.0%
TGAATATGAACTATCGGATA+AGG - chr2_2:19288662-19288681 None:intergenic 30.0%
GGTCCAAAAACAAAAATAGT+AGG - chr2_2:19288741-19288760 None:intergenic 30.0%
!!! TCATCCATTTTAAAGTATCG+GGG - chr2_2:19288797-19288816 None:intergenic 30.0%
!!! GTCATCCATTTTAAAGTATC+GGG - chr2_2:19288798-19288817 None:intergenic 30.0%
!!! CGTCATCCATTTTAAAGTAT+CGG - chr2_2:19288799-19288818 None:intergenic 30.0%
!!! AGTACTGATGTGTTCTTTTT+TGG + chr2_2:19289062-19289081 Msa0242820:intron 30.0%
!!! TGGATATAGTGCTTCTTTTT+TGG + chr2_2:19289082-19289101 Msa0242820:intron 30.0%
AATGCTACACTATATCCAAA+AGG - chr2_2:19289136-19289155 None:intergenic 30.0%
ATTAACAAACACAAGAAACC+AGG - chr2_2:19289269-19289288 None:intergenic 30.0%
!! TAAGTTTGAAGAGTTGGTAA+TGG - chr2_2:19289498-19289517 None:intergenic 30.0%
TCATGTTAAGTTTGAAGAGT+TGG - chr2_2:19289504-19289523 None:intergenic 30.0%
ACTCTTCAAACTTAACATGA+TGG + chr2_2:19289504-19289523 Msa0242820:intron 30.0%
AATAAGTTAGAGGAGTGAAT+GGG - chr2_2:19290190-19290209 None:intergenic 30.0%
AAATAAGTTAGAGGAGTGAA+TGG - chr2_2:19290191-19290210 None:intergenic 30.0%
! GATAGTGGTAGTATACAATA+AGG + chr2_2:19290523-19290542 Msa0242820:intron 30.0%
ATATGACCAGTAAGATTGAA+GGG - chr2_2:19290705-19290724 None:intergenic 30.0%
AACACACACATACATAAATG+AGG + chr2_2:19291125-19291144 Msa0242820:intron 30.0%
!! GGTATTTTTCGACTTAACAA+AGG + chr2_2:19291409-19291428 Msa0242820:intron 30.0%
AGTGTTAAATATCTTGAGTG+AGG + chr2_2:19291465-19291484 Msa0242820:intron 30.0%
AACTAATCGAGAAACTTATG+AGG - chr2_2:19291565-19291584 None:intergenic 30.0%
CAGCAAATGAAGAAGATTAA+TGG - chr2_2:19291723-19291742 None:intergenic 30.0%
! GTTTAAGGTGAAAACTCAAA+AGG - chr2_2:19292020-19292039 None:intergenic 30.0%
CTTAAACTAGTTCCAAATCT+GGG + chr2_2:19292033-19292052 Msa0242820:intron 30.0%
TGATTAACAACAATCACCAT+TGG - chr2_2:19292232-19292251 None:intergenic 30.0%
GCAAAAACAATGAAAGAACT+AGG - chr2_2:19292426-19292445 None:intergenic 30.0%
AATTCACTTCAAATTGACAG+AGG - chr2_2:19292517-19292536 None:intergenic 30.0%
TGTATGTGTTAATGCTTCAT+AGG + chr2_2:19292624-19292643 Msa0242820:intron 30.0%
AATGCTTCATAGGTTATGTT+TGG + chr2_2:19292634-19292653 Msa0242820:intron 30.0%
TAAACCAATTAATCACCAGA+AGG - chr2_2:19292692-19292711 None:intergenic 30.0%
AACATCTCCATAAACATTCA+CGG - chr2_2:19292764-19292783 None:intergenic 30.0%
! ATGTCGTTTGAATCCTAAAT+TGG + chr2_2:19292789-19292808 Msa0242820:CDS 30.0%
AGTGTCTCTATATTGGAATT+TGG + chr2_2:19292826-19292845 Msa0242820:CDS 30.0%
TGAGATAGAAAATTGCATTC+TGG - chr2_2:19292891-19292910 None:intergenic 30.0%
AATCAAATTTCAGGAGTTAC+TGG - chr2_2:19293070-19293089 None:intergenic 30.0%
GACGAAACTAATCAAATTTC+AGG - chr2_2:19293079-19293098 None:intergenic 30.0%
CACTAACAAAATTCTTACTC+AGG - chr2_2:19293163-19293182 None:intergenic 30.0%
! CTGAGTAAGAATTTTGTTAG+TGG + chr2_2:19293161-19293180 Msa0242820:intron 30.0%
ATGAGGATCAAGCTTATTAA+GGG + chr2_2:19293216-19293235 Msa0242820:intron 30.0%
TGAAATTTCATAAACATCCC+TGG - chr2_2:19293251-19293270 None:intergenic 30.0%
! AAAATCATTTTGGACCTTGA+AGG - chr2_2:19293307-19293326 None:intergenic 30.0%
! GACAACATTTTGTACCAAAT+AGG - chr2_2:19293391-19293410 None:intergenic 30.0%
TGGTACAAAATGTTGTCAAA+TGG + chr2_2:19293394-19293413 Msa0242820:intron 30.0%
TACAAAATGTTGTCAAATGG+CGG + chr2_2:19293397-19293416 Msa0242820:intron 30.0%
TTTCATGTGAAACCAATTTG+AGG + chr2_2:19293520-19293539 Msa0242820:intron 30.0%
TTCATGTGAAACCAATTTGA+GGG + chr2_2:19293521-19293540 Msa0242820:intron 30.0%
TCAATAACATTCCAATGAGA+TGG - chr2_2:19293578-19293597 None:intergenic 30.0%
ATTGAAGCTTTACCTTCTTA+TGG + chr2_2:19293593-19293612 Msa0242820:CDS 30.0%
AGATACAAGAGCTTGATAAA+TGG + chr2_2:19293641-19293660 Msa0242820:CDS 30.0%
GATAGAAGCAAGAACAAATT+TGG - chr2_2:19293712-19293731 None:intergenic 30.0%
! TCTTGCTTCTATCAAGTTTT+TGG + chr2_2:19293719-19293738 Msa0242820:intron 30.0%
GATATAATTTCAACGAGATG+AGG - chr2_2:19293873-19293892 None:intergenic 30.0%
GTAAGCTATTGACATTTGAA+AGG - chr2_2:19294504-19294523 None:intergenic 30.0%
GAAGATTGTTATGTTTCCAT+TGG + chr2_2:19294600-19294619 Msa0242820:CDS 30.0%
AATTTCTCTCAAAAGTGGAT+GGG + chr2_2:19294632-19294651 Msa0242820:CDS 30.0%
CTTATATGTACTTTCTCACT+TGG - chr2_2:19294684-19294703 None:intergenic 30.0%
! GTGAGAAAGTACATATAAGA+AGG + chr2_2:19294685-19294704 Msa0242820:CDS 30.0%
AAATGTTAACATGCTCTATC+AGG - chr2_2:19294782-19294801 None:intergenic 30.0%
TGCTTTATCACACATAGAAA+TGG + chr2_2:19294866-19294885 Msa0242820:CDS 30.0%
TATACAGCAATTTCAGCTAA+AGG + chr2_2:19294897-19294916 Msa0242820:CDS 30.0%
ATTTCAGCTAAAGGTAATTC+TGG + chr2_2:19294906-19294925 Msa0242820:CDS 30.0%
TTTGGATCAAATTTGTCATC+AGG - chr2_2:19294939-19294958 None:intergenic 30.0%
AATGTTATGTGATGCAAAAG+TGG - chr2_2:19294969-19294988 None:intergenic 30.0%
TTTGCATCACATAACATTGA+AGG + chr2_2:19294971-19294990 Msa0242820:CDS 30.0%
ATTCCGTTTCTTCAAGTAAA+TGG + chr2_2:19295093-19295112 Msa0242820:CDS 30.0%
TTCCGTTTCTTCAAGTAAAT+GGG + chr2_2:19295094-19295113 Msa0242820:CDS 30.0%
TTCCCATTTACTTGAAGAAA+CGG - chr2_2:19295099-19295118 None:intergenic 30.0%
ATGACGAAGAAGAATTTGAA+GGG - chr2_2:19295184-19295203 None:intergenic 30.0%
ATAAACTGTTCTCAAAACAC+TGG + chr2_2:19295250-19295269 Msa0242820:exon 30.0%
AGAATCAAATTTGGTATCCA+AGG - chr2_2:19295317-19295336 None:intergenic 30.0%
TCATTTGCCAATTGAGAATA+GGG + chr2_2:19295390-19295409 Msa0242820:three_prime_UTR 30.0%
!! CATTTTGAGTCCTTTTGTAA+AGG - chr2_2:19295564-19295583 None:intergenic 30.0%
GATAAGGGTTAATTAACCCT+TGG + chr2_2:19285284-19285303 Msa0242820:intron 35.0%
!! CGAAAGTAATTGAGTGTTGA+AGG - chr2_2:19285330-19285349 None:intergenic 35.0%
TATAATTACTCGACGTTGCT+CGG + chr2_2:19285368-19285387 Msa0242820:intron 35.0%
! GTTTTGTGGGTTTATCTTCA+GGG - chr2_2:19285672-19285691 None:intergenic 35.0%
! TGTTTTGTGGGTTTATCTTC+AGG - chr2_2:19285673-19285692 None:intergenic 35.0%
! TTTGGGAATGAGTCTGTTTT+AGG - chr2_2:19285704-19285723 None:intergenic 35.0%
!! GTGTTTACAGTGCTTGTTTT+TGG - chr2_2:19285722-19285741 None:intergenic 35.0%
!!! TATTTTGAGGGTGTTCTTTG+GGG - chr2_2:19285777-19285796 None:intergenic 35.0%
GTCAGTTCTTTGAATCAAGT+TGG - chr2_2:19285917-19285936 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - chr2_2:19285941-19285960 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - chr2_2:19285942-19285961 None:intergenic 35.0%
! GACTTGATATGGTTTTTCTC+TGG - chr2_2:19286018-19286037 None:intergenic 35.0%
! GTTTAGGTGTTTTCTGAGTT+TGG - chr2_2:19286195-19286214 None:intergenic 35.0%
!! AGCTCTGTTTTGTGCTTTTT+CGG - chr2_2:19286220-19286239 None:intergenic 35.0%
! TTGTGTTGTTGCTTGTTTCT+TGG - chr2_2:19286448-19286467 None:intergenic 35.0%
CGAAATCCTACAACAAAACA+CGG + chr2_2:19286487-19286506 Msa0242820:intron 35.0%
GAAATCCTACAACAAAACAC+GGG + chr2_2:19286488-19286507 Msa0242820:intron 35.0%
CAACCCAAATCATTAAAAGG+TGG + chr2_2:19286538-19286557 Msa0242820:intron 35.0%
! CAGCCACCTTTTAATGATTT+GGG - chr2_2:19286544-19286563 None:intergenic 35.0%
ATTATTGTTTACTCCGGTGT+CGG - chr2_2:19286588-19286607 None:intergenic 35.0%
GGCTTGATTATTGTTTACTC+CGG - chr2_2:19286594-19286613 None:intergenic 35.0%
AACTGCTTATCACTGCTAAA+GGG - chr2_2:19286953-19286972 None:intergenic 35.0%
AAACTGCTTATCACTGCTAA+AGG - chr2_2:19286954-19286973 None:intergenic 35.0%
! TCTTCTTTCTTTGTTTGCAG+TGG - chr2_2:19287022-19287041 None:intergenic 35.0%
! TGGCTAAAGTATTTGGATCT+GGG + chr2_2:19287436-19287455 Msa0242820:intron 35.0%
GTGTGCATAAAGTACAATCT+TGG - chr2_2:19287546-19287565 None:intergenic 35.0%
CTAAACGGAAAAGTGACTAA+AGG + chr2_2:19287833-19287852 Msa0242820:intron 35.0%
GTGCGTACTCATTAAGATAT+TGG + chr2_2:19288459-19288478 Msa0242820:intron 35.0%
CTTCACAGGTATTCTATAGT+AGG - chr2_2:19288774-19288793 None:intergenic 35.0%
! AGCACTAACAATGTTCCTTT+TGG + chr2_2:19289118-19289137 Msa0242820:intron 35.0%
CTGTGTCAATTAAATTGGGA+CGG - chr2_2:19289742-19289761 None:intergenic 35.0%
GGTATAAATAAAGGGGAAAG+TGG + chr2_2:19289790-19289809 Msa0242820:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr2_2:19289929-19289948 Msa0242820:intron 35.0%
AAAATGGGATAACCTAAGAG+TGG + chr2_2:19290006-19290025 Msa0242820:intron 35.0%
AGAGAGATTAGAACTAGAAG+GGG - chr2_2:19290165-19290184 None:intergenic 35.0%
CAGAGAGATTAGAACTAGAA+GGG - chr2_2:19290166-19290185 None:intergenic 35.0%
ATAAGTTAGAGGAGTGAATG+GGG - chr2_2:19290189-19290208 None:intergenic 35.0%
GATATGACCAGTAAGATTGA+AGG - chr2_2:19290706-19290725 None:intergenic 35.0%
AGTTATATTCAAAGTCGTGC+TGG - chr2_2:19290966-19290985 None:intergenic 35.0%
! AATTGTTTGAAACGGCTTCA+TGG - chr2_2:19291216-19291235 None:intergenic 35.0%
! GCCGTTTCAAACAATTTTGT+CGG + chr2_2:19291220-19291239 Msa0242820:intron 35.0%
GCCGACAAAATTGTTTGAAA+CGG - chr2_2:19291224-19291243 None:intergenic 35.0%
ACTAATATCTCGAATCGAGA+AGG - chr2_2:19291511-19291530 None:intergenic 35.0%
!!! GCTTTTTCATTTCATGCCAT+CGG - chr2_2:19291616-19291635 None:intergenic 35.0%
! CCAGATTTGGAACTAGTTTA+AGG - chr2_2:19292035-19292054 None:intergenic 35.0%
CCTTAAACTAGTTCCAAATC+TGG + chr2_2:19292032-19292051 Msa0242820:intron 35.0%
AAGCAATATAGTCCCAGATT+TGG - chr2_2:19292048-19292067 None:intergenic 35.0%
GCATATACAAGCCAAACAAA+AGG - chr2_2:19292210-19292229 None:intergenic 35.0%
GAAGTGATTCTCTCATTGAT+TGG + chr2_2:19292375-19292394 Msa0242820:intron 35.0%
CTTTCCTTCTGGTGATTAAT+TGG + chr2_2:19292685-19292704 Msa0242820:intron 35.0%
! TGGTTTATGTGACCTTTTTC+AGG + chr2_2:19292705-19292724 Msa0242820:intron 35.0%
!!! TTTATGTGACCTTTTTCAGG+TGG + chr2_2:19292708-19292727 Msa0242820:intron 35.0%
TGAATCCTAAATTGGATCCT+AGG + chr2_2:19292797-19292816 Msa0242820:CDS 35.0%
!! ATATTGGAATTTGGTGCAGT+TGG + chr2_2:19292835-19292854 Msa0242820:CDS 35.0%
! TCTCAAGTCATTTGCTGATA+AGG + chr2_2:19292906-19292925 Msa0242820:CDS 35.0%
! CTCAAGTCATTTGCTGATAA+GGG + chr2_2:19292907-19292926 Msa0242820:CDS 35.0%
! AGCACCTTTTTCCAAAAAGA+GGG - chr2_2:19293001-19293020 None:intergenic 35.0%
!! GAAAAAGGTGCTGTCATTAT+TGG + chr2_2:19293009-19293028 Msa0242820:CDS 35.0%
CTGGTAAAAAATGAAGCAAG+AGG - chr2_2:19293051-19293070 None:intergenic 35.0%
!!! TTTCGTCTTTTTTATGTGCG+AGG + chr2_2:19293092-19293111 Msa0242820:intron 35.0%
! GAATTTTGTTAGTGGTTTCG+TGG + chr2_2:19293169-19293188 Msa0242820:intron 35.0%
TGACTAACAAAAGAGACATG+AGG + chr2_2:19293199-19293218 Msa0242820:intron 35.0%
CATGAGGATCAAGCTTATTA+AGG + chr2_2:19293215-19293234 Msa0242820:intron 35.0%
AACCAATTTGAGGGTAATTG+AGG + chr2_2:19293530-19293549 Msa0242820:intron 35.0%
!! AGGAGTGGTTTTTCTTGTTT+AGG + chr2_2:19293550-19293569 Msa0242820:intron 35.0%
! TTGTTTAGGATCCATCTCAT+TGG + chr2_2:19293564-19293583 Msa0242820:intron 35.0%
CTTGATAAATGGTAACCAGT+TGG + chr2_2:19293652-19293671 Msa0242820:CDS 35.0%
TTACTAACCTGGTACTATAC+CGG - chr2_2:19294117-19294136 None:intergenic 35.0%
CTGTTATCCTCATTGTGAAA+TGG + chr2_2:19294156-19294175 Msa0242820:intron 35.0%
CTTCAGATTGAATGAGTGTT+CGG + chr2_2:19294203-19294222 Msa0242820:intron 35.0%
TTGAATGTAAGCACACATGT+TGG + chr2_2:19294332-19294351 Msa0242820:intron 35.0%
AAAGGTTGTCTATGAAGTAC+TGG - chr2_2:19294486-19294505 None:intergenic 35.0%
AGAAATTGCGTCAAAACCAA+TGG - chr2_2:19294619-19294638 None:intergenic 35.0%
CAATTTCTCTCAAAAGTGGA+TGG + chr2_2:19294631-19294650 Msa0242820:CDS 35.0%
GATCAGTACGGCATTAAATA+TGG + chr2_2:19294654-19294673 Msa0242820:CDS 35.0%
! TCATTTGGTACTGAAATGTC+TGG + chr2_2:19294741-19294760 Msa0242820:CDS 35.0%
ATTGAGTTCAGAACAACCAA+AGG + chr2_2:19294819-19294838 Msa0242820:CDS 35.0%
GGAAAGAATATCACAATTGC+TGG + chr2_2:19295002-19295021 Msa0242820:CDS 35.0%
! GAAAGGCATATGTTTGTGAA+GGG - chr2_2:19295053-19295072 None:intergenic 35.0%
! TGAAAGGCATATGTTTGTGA+AGG - chr2_2:19295054-19295073 None:intergenic 35.0%
AGAAACGGAATTTGTAGACA+AGG - chr2_2:19295084-19295103 None:intergenic 35.0%
ATGGGAATGTTCAAATGTCT+CGG + chr2_2:19295112-19295131 Msa0242820:CDS 35.0%
GATGACGAAGAAGAATTTGA+AGG - chr2_2:19295185-19295204 None:intergenic 35.0%
GTCATTTGCCAATTGAGAAT+AGG + chr2_2:19295389-19295408 Msa0242820:three_prime_UTR 35.0%
GAATGTACCCTATTCTCAAT+TGG - chr2_2:19295400-19295419 None:intergenic 35.0%
!! TTTGGTAGTGCCTTTACAAA+AGG + chr2_2:19295551-19295570 Msa0242820:three_prime_UTR 35.0%
TTTCACTGTAAAGCATGTAG+TGG + chr2_2:19295624-19295643 Msa0242820:three_prime_UTR 35.0%
!! TGTAAAGCATGTAGTGGATT+TGG + chr2_2:19295630-19295649 Msa0242820:three_prime_UTR 35.0%
CTTCTGTAGGAGACCTATTA+AGG - chr2_2:19285220-19285239 None:intergenic 40.0%
AATAGGTCTCCTACAGAAGA+AGG + chr2_2:19285221-19285240 Msa0242820:CDS 40.0%
AAAACCATGCCTTCTTCTGT+AGG - chr2_2:19285233-19285252 None:intergenic 40.0%
ATAATTACTCGACGTTGCTC+GGG + chr2_2:19285369-19285388 Msa0242820:intron 40.0%
!! ATTTGTACTGTACCGATTCG+TGG - chr2_2:19285454-19285473 None:intergenic 40.0%
ATGCGGCACAATTTGTATCT+TGG - chr2_2:19285617-19285636 None:intergenic 40.0%
CAAATTGTGCCGCATATAGA+CGG + chr2_2:19285622-19285641 Msa0242820:intron 40.0%
TATGGTGTACCGTCTATATG+CGG - chr2_2:19285634-19285653 None:intergenic 40.0%
!!! GGGATGTTTTTAGGTGGTTA+TGG - chr2_2:19285652-19285671 None:intergenic 40.0%
!!! TCTTCAGGGATGTTTTTAGG+TGG - chr2_2:19285658-19285677 None:intergenic 40.0%
!! TAGGTGGTGATGTGTTTTGT+GGG - chr2_2:19285685-19285704 None:intergenic 40.0%
!! TTAGGTGGTGATGTGTTTTG+TGG - chr2_2:19285686-19285705 None:intergenic 40.0%
!!! ATTTTGAGGGTGTTCTTTGG+GGG - chr2_2:19285776-19285795 None:intergenic 40.0%
!! TCTTCGATTTGTTGGGTGTT+GGG - chr2_2:19285812-19285831 None:intergenic 40.0%
ATGGAAGTTGCATGATCCTT+TGG - chr2_2:19285843-19285862 None:intergenic 40.0%
TTTGTGCTCTTTCGGTAGAT+CGG - chr2_2:19285879-19285898 None:intergenic 40.0%
! ATGGTTTTTCTCTGGTGTAC+CGG - chr2_2:19286010-19286029 None:intergenic 40.0%
!!! GTTACTTTTGCTTCGAGATC+GGG - chr2_2:19286069-19286088 None:intergenic 40.0%
!!! GGTTACTTTTGCTTCGAGAT+CGG - chr2_2:19286070-19286089 None:intergenic 40.0%
!!! ATTGTGTGCTGGTTTTCGAT+GGG - chr2_2:19286095-19286114 None:intergenic 40.0%
!!! TATTGTGTGCTGGTTTTCGA+TGG - chr2_2:19286096-19286115 None:intergenic 40.0%
TCGTCTTACATATTGTGTGC+TGG - chr2_2:19286106-19286125 None:intergenic 40.0%
! AGGTGTTTTCTGAGTTTGGA+GGG - chr2_2:19286191-19286210 None:intergenic 40.0%
! TAGGTGTTTTCTGAGTTTGG+AGG - chr2_2:19286192-19286211 None:intergenic 40.0%
!!! TTGTGCTTTTTCGGTGGTTT+AGG - chr2_2:19286211-19286230 None:intergenic 40.0%
!!! TCTGTTTTGTGCTTTTTCGG+TGG - chr2_2:19286217-19286236 None:intergenic 40.0%
TGGAGGAAAACTCTGTTACA+CGG - chr2_2:19286262-19286281 None:intergenic 40.0%
! GTAACAGAGTTTTCCTCCAA+AGG + chr2_2:19286263-19286282 Msa0242820:intron 40.0%
TTTGTTGGGGTCATTTCCTT+TGG - chr2_2:19286282-19286301 None:intergenic 40.0%
!! TGATGTTTTAAGTGAGGAGG+CGG - chr2_2:19286308-19286327 None:intergenic 40.0%
!! GGTTGATGTTTTAAGTGAGG+AGG - chr2_2:19286311-19286330 None:intergenic 40.0%
!! GGTGGTTGATGTTTTAAGTG+AGG - chr2_2:19286314-19286333 None:intergenic 40.0%
!! TTAATCAATTGTGGTGGTGG+TGG - chr2_2:19286351-19286370 None:intergenic 40.0%
AGGTTAATCAATTGTGGTGG+TGG - chr2_2:19286354-19286373 None:intergenic 40.0%
TGGAGGTTAATCAATTGTGG+TGG - chr2_2:19286357-19286376 None:intergenic 40.0%
TGGTGGAGGTTAATCAATTG+TGG - chr2_2:19286360-19286379 None:intergenic 40.0%
TTCTTGGTGAGGATGTTTGA+CGG - chr2_2:19286432-19286451 None:intergenic 40.0%
! TTGTTGCTTGTTTCTTGGTG+AGG - chr2_2:19286443-19286462 None:intergenic 40.0%
! GCAGCCACCTTTTAATGATT+TGG - chr2_2:19286545-19286564 None:intergenic 40.0%
AGGACCCAAAAAAATTCTGG+AGG + chr2_2:19286648-19286667 Msa0242820:intron 40.0%
AGATGTTACTCGAAAGGGTT+TGG - chr2_2:19286715-19286734 None:intergenic 40.0%
TCGTCAGATGTTACTCGAAA+GGG - chr2_2:19286720-19286739 None:intergenic 40.0%
ACTTGGAGGTAACTTTGTTG+TGG - chr2_2:19286780-19286799 None:intergenic 40.0%
TTACTGCTTGTTTGTGTGTC+TGG - chr2_2:19286807-19286826 None:intergenic 40.0%
ACTGCTTATCACTGCTAAAG+GGG - chr2_2:19286952-19286971 None:intergenic 40.0%
AAAGAAAGAAGACCACACAG+TGG + chr2_2:19287030-19287049 Msa0242820:intron 40.0%
AAGAAAGAAGACCACACAGT+GGG + chr2_2:19287031-19287050 Msa0242820:intron 40.0%
AAAAAACCAACCCCAAACTC+CGG + chr2_2:19287159-19287178 Msa0242820:intron 40.0%
! TGCATCGTGGCTAAAGTATT+TGG + chr2_2:19287429-19287448 Msa0242820:intron 40.0%
! GTGGCTAAAGTATTTGGATC+TGG + chr2_2:19287435-19287454 Msa0242820:intron 40.0%
! GGCTAAAGTATTTGGATCTG+GGG + chr2_2:19287437-19287456 Msa0242820:intron 40.0%
TTAGAGAGAGGTCAGAGAAA+AGG + chr2_2:19287494-19287513 Msa0242820:intron 40.0%
GTATGAATTTCTGCATGTCC+GGG - chr2_2:19288082-19288101 None:intergenic 40.0%
GGTATGAATTTCTGCATGTC+CGG - chr2_2:19288083-19288102 None:intergenic 40.0%
TCTATAGTAGGAGACATGTC+TGG - chr2_2:19288762-19288781 None:intergenic 40.0%
! GAAGCCCCGATACTTTAAAA+TGG + chr2_2:19288790-19288809 Msa0242820:intron 40.0%
ACACAAGTATCCGTGAGTAT+CGG - chr2_2:19288947-19288966 None:intergenic 40.0%
! GCATTGATGTATAGCACTGA+TGG + chr2_2:19289151-19289170 Msa0242820:intron 40.0%
ATGTTAATGTACTACGAGCC+TGG + chr2_2:19289248-19289267 Msa0242820:intron 40.0%
TACGAGATACGATACGGATA+CGG - chr2_2:19289398-19289417 None:intergenic 40.0%
TCCGTATCGTATCTCGTATT+CGG + chr2_2:19289400-19289419 Msa0242820:intron 40.0%
ATAAAACTCACTTTCGGCTC+AGG - chr2_2:19289474-19289493 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG - chr2_2:19289739-19289758 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr2_2:19289930-19289949 Msa0242820:intron 40.0%
GGACATAATAAGCCACTCTT+AGG - chr2_2:19290021-19290040 None:intergenic 40.0%
TCAAACTAGACTGTGAGTCA+GGG - chr2_2:19290042-19290061 None:intergenic 40.0%
ATCTTCTCCATGATTGGAGT+GGG + chr2_2:19290095-19290114 Msa0242820:intron 40.0%
ACAGAAGAGAAACAGGAGAA+TGG - chr2_2:19290126-19290145 None:intergenic 40.0%
TGGATTGACAGAAGAGAAAC+AGG - chr2_2:19290133-19290152 None:intergenic 40.0%
GCAGAGAGATTAGAACTAGA+AGG - chr2_2:19290167-19290186 None:intergenic 40.0%
CGTATACCCTTCAATCTTAC+TGG + chr2_2:19290696-19290715 Msa0242820:intron 40.0%
TCTTACTGGTCATATCATCG+AGG + chr2_2:19290710-19290729 Msa0242820:intron 40.0%
GAAGGATAGAGTATGTGAAG+AGG - chr2_2:19290743-19290762 None:intergenic 40.0%
! GAGAACATAGGACTTTTGAG+TGG - chr2_2:19291000-19291019 None:intergenic 40.0%
! CTGATTTGTGGTGAGAACAT+AGG - chr2_2:19291012-19291031 None:intergenic 40.0%
CGATAAAAACTTTGCACCGA+TGG + chr2_2:19291597-19291616 Msa0242820:intron 40.0%
GTACTTACAAGCATCTTCTC+AGG - chr2_2:19291951-19291970 None:intergenic 40.0%
CTTGTAAGTACGTTTCACTC+TGG + chr2_2:19291960-19291979 Msa0242820:intron 40.0%
!! GTTTGGCTTGTATATGCCAA+TGG + chr2_2:19292213-19292232 Msa0242820:intron 40.0%
! AATCTGGGATACTTTCCTTC+TGG + chr2_2:19292674-19292693 Msa0242820:intron 40.0%
AGCAATGCCGTGAATGTTTA+TGG + chr2_2:19292754-19292773 Msa0242820:CDS 40.0%
TCCAATATAGAGACACTGTG+TGG - chr2_2:19292823-19292842 None:intergenic 40.0%
! AAGTCATTTGCTGATAAGGG+TGG + chr2_2:19292910-19292929 Msa0242820:CDS 40.0%
TTTCCAAAAAGAGGGTGAGA+TGG - chr2_2:19292993-19293012 None:intergenic 40.0%
!! CTCACCCTCTTTTTGGAAAA+AGG + chr2_2:19292994-19293013 Msa0242820:CDS 40.0%
! CAGCACCTTTTTCCAAAAAG+AGG - chr2_2:19293002-19293021 None:intergenic 40.0%
TGCTGTCATTATTGGATCTC+AGG + chr2_2:19293017-19293036 Msa0242820:CDS 40.0%
CTCCTCAATTACCCTCAAAT+TGG - chr2_2:19293535-19293554 None:intergenic 40.0%
ATTTGAGGGTAATTGAGGAG+TGG + chr2_2:19293535-19293554 Msa0242820:intron 40.0%
TTATGACCACATCTTCCAAC+TGG - chr2_2:19293670-19293689 None:intergenic 40.0%
TTGGAAGATGTGGTCATAAC+AGG + chr2_2:19293671-19293690 Msa0242820:CDS 40.0%
TCAATGGTTCCATTATTGCC+TGG - chr2_2:19293792-19293811 None:intergenic 40.0%
! GGCAATAATGGAACCATTGA+TGG + chr2_2:19293792-19293811 Msa0242820:intron 40.0%
! AATGGAACCATTGATGGCAA+TGG + chr2_2:19293798-19293817 Msa0242820:CDS 40.0%
! AACCATTGATGGCAATGGAA+TGG + chr2_2:19293803-19293822 Msa0242820:CDS 40.0%
AACCATTCCATTGCCATCAA+TGG - chr2_2:19293808-19293827 None:intergenic 40.0%
! TTGATGGCAATGGAATGGTT+TGG + chr2_2:19293808-19293827 Msa0242820:CDS 40.0%
TTTACCTGCAATAAACAGGG+TGG - chr2_2:19293953-19293972 None:intergenic 40.0%
TACTATACCGGCAGTATAAG+GGG - chr2_2:19294105-19294124 None:intergenic 40.0%
GTACTATACCGGCAGTATAA+GGG - chr2_2:19294106-19294125 None:intergenic 40.0%
! GAAGTGTCAATGCTACATAG+AGG - chr2_2:19294187-19294206 None:intergenic 40.0%
AGTTGGACACAAGCATGTAT+TGG - chr2_2:19294232-19294251 None:intergenic 40.0%
CCAACTATGAGGCAAAAACA+CGG + chr2_2:19294246-19294265 Msa0242820:intron 40.0%
! GTGTCGATGTTAGTCACTTA+TGG - chr2_2:19294378-19294397 None:intergenic 40.0%
GTCAATAGCTTACCAAACCT+TGG + chr2_2:19294511-19294530 Msa0242820:intron 40.0%
GACGCAATTTCTCTCAAAAG+TGG + chr2_2:19294627-19294646 Msa0242820:CDS 40.0%
AAAAGTGGATGGGATCAGTA+CGG + chr2_2:19294642-19294661 Msa0242820:CDS 40.0%
GTTCATCTTCGTGCATTTAC+CGG + chr2_2:19294708-19294727 Msa0242820:CDS 40.0%
ACCAAATGAAATAGCAGAGC+CGG - chr2_2:19294730-19294749 None:intergenic 40.0%
! TTTGGTACTGAAATGTCTGG+TGG + chr2_2:19294744-19294763 Msa0242820:CDS 40.0%
TTCAGAACAACCAAAGGAAG+AGG + chr2_2:19294825-19294844 Msa0242820:CDS 40.0%
TATGTAACCACCTCTTCCTT+TGG - chr2_2:19294838-19294857 None:intergenic 40.0%
!!! TGCAAAAGTGGAAGTGCTTT+TGG - chr2_2:19294957-19294976 None:intergenic 40.0%
TGGGAATGTTCAAATGTCTC+GGG + chr2_2:19295113-19295132 Msa0242820:CDS 40.0%
CCAAGTTCTTGACAAGGTTT+AGG - chr2_2:19295158-19295177 None:intergenic 40.0%
CCTAAACCTTGTCAAGAACT+TGG + chr2_2:19295155-19295174 Msa0242820:CDS 40.0%
TGTTACTACCTCATGAGTCT+CGG + chr2_2:19295206-19295225 Msa0242820:CDS 40.0%
!!! TATTTTGACCGAGACTCATG+AGG - chr2_2:19295217-19295236 None:intergenic 40.0%
CTGTTCTCAAAACACTGGAT+TGG + chr2_2:19295255-19295274 Msa0242820:three_prime_UTR 40.0%
TTAAGGCCTTCCACCGAAAA+CGG - chr2_2:19285203-19285222 None:intergenic 45.0%
TTTCGGTGGAAGGCCTTAAT+AGG + chr2_2:19285204-19285223 Msa0242820:CDS 45.0%
! GCTCGGGTTAGACATAATTG+AGG + chr2_2:19285385-19285404 Msa0242820:intron 45.0%
!! GGGAATGAGTCTGTTTTAGG+TGG - chr2_2:19285701-19285720 None:intergenic 45.0%
!! CTTCGATTTGTTGGGTGTTG+GGG - chr2_2:19285811-19285830 None:intergenic 45.0%
!! CTCTTCGATTTGTTGGGTGT+TGG - chr2_2:19285813-19285832 None:intergenic 45.0%
! CAGGTGCTCTTCGATTTGTT+GGG - chr2_2:19285819-19285838 None:intergenic 45.0%
! TCAGGTGCTCTTCGATTTGT+TGG - chr2_2:19285820-19285839 None:intergenic 45.0%
AGTTGCATGATCCTTTGGTC+AGG - chr2_2:19285838-19285857 None:intergenic 45.0%
! TGGTTTTTCTCTGGTGTACC+GGG - chr2_2:19286009-19286028 None:intergenic 45.0%
GGAGGAAAACTCTGTTACAC+GGG - chr2_2:19286261-19286280 None:intergenic 45.0%
!! GATGTTTTAAGTGAGGAGGC+GGG - chr2_2:19286307-19286326 None:intergenic 45.0%
!! TAGTGATGCAATGATGGTGG+TGG - chr2_2:19286407-19286426 None:intergenic 45.0%
!!! GGTATGCTCTTGTCGCTTTT+TGG - chr2_2:19286615-19286634 None:intergenic 45.0%
AATGACTACTACCGCCAACA+CGG + chr2_2:19286677-19286696 Msa0242820:intron 45.0%
GTCGTCAGATGTTACTCGAA+AGG - chr2_2:19286721-19286740 None:intergenic 45.0%
TTTGTGTGTCTGGTGCAACT+TGG - chr2_2:19286797-19286816 None:intergenic 45.0%
AGGACAAGAGGCAACAAGAT+CGG + chr2_2:19287284-19287303 Msa0242820:intron 45.0%
GAGTTCGTCAGCTGTTTATG+CGG - chr2_2:19287321-19287340 None:intergenic 45.0%
AAAACTGATGAACCAAGCGC+CGG + chr2_2:19287343-19287362 Msa0242820:intron 45.0%
CACGATGCAGATCTAAGAGA+GGG - chr2_2:19287418-19287437 None:intergenic 45.0%
GGGAAAAGAACTGCTGAAGA+GGG + chr2_2:19287457-19287476 Msa0242820:intron 45.0%
GGAAAAGAACTGCTGAAGAG+GGG + chr2_2:19287458-19287477 Msa0242820:intron 45.0%
! TTGGGTTTGGGTTTAGAGAG+AGG + chr2_2:19287482-19287501 Msa0242820:intron 45.0%
!! TTAAAGTATCGGGGCTTCAC+AGG - chr2_2:19288788-19288807 None:intergenic 45.0%
!! GATACGTATCGGGAAGTATC+AGG - chr2_2:19288857-19288876 None:intergenic 45.0%
GATACTTCCCGATACGTATC+CGG + chr2_2:19288857-19288876 Msa0242820:intron 45.0%
ATACTCTCCGGATACGTATC+GGG - chr2_2:19288867-19288886 None:intergenic 45.0%
GATACTCTCCGGATACGTAT+CGG - chr2_2:19288868-19288887 None:intergenic 45.0%
CACAAGTATCCGTGAGTATC+GGG - chr2_2:19288946-19288965 None:intergenic 45.0%
!!! AGCACTGATGGTGCTCTTTT+TGG + chr2_2:19289163-19289182 Msa0242820:intron 45.0%
ACGAGATACGATACGGATAC+GGG - chr2_2:19289397-19289416 None:intergenic 45.0%
CCCGAATACGAGATACGATA+CGG - chr2_2:19289404-19289423 None:intergenic 45.0%
CCGTATCGTATCTCGTATTC+GGG + chr2_2:19289401-19289420 Msa0242820:intron 45.0%
GTCAAACTAGACTGTGAGTC+AGG - chr2_2:19290043-19290062 None:intergenic 45.0%
GCTAGCATCTTCTCCATGAT+TGG + chr2_2:19290089-19290108 Msa0242820:intron 45.0%
CATCTTCTCCATGATTGGAG+TGG + chr2_2:19290094-19290113 Msa0242820:intron 45.0%
GAAGAGAAACAGGAGAATGG+TGG - chr2_2:19290123-19290142 None:intergenic 45.0%
TGGCTGCATAGTGTTCTGTT+CGG - chr2_2:19291189-19291208 None:intergenic 45.0%
! TGAAACGGCTTCATGGATTG+TGG - chr2_2:19291209-19291228 None:intergenic 45.0%
AGAGAAGAAGCAGGAACAAG+AGG - chr2_2:19291819-19291838 None:intergenic 45.0%
GCAAAAGGGTCAGAGACTAA+AGG - chr2_2:19291919-19291938 None:intergenic 45.0%
TCAGGTCAAAGCTGGCAAAA+GGG - chr2_2:19291933-19291952 None:intergenic 45.0%
AGAGCAATGCCACCTGAAAA+AGG - chr2_2:19292720-19292739 None:intergenic 45.0%
TGTGGCCTAGGATCCAATTT+AGG - chr2_2:19292805-19292824 None:intergenic 45.0%
GCCACACAGTGTCTCTATAT+TGG + chr2_2:19292819-19292838 Msa0242820:CDS 45.0%
!! GAATTTGGTGCAGTTGGAGA+TGG + chr2_2:19292841-19292860 Msa0242820:CDS 45.0%
! TAGCCATCTCACCCTCTTTT+TGG + chr2_2:19292987-19293006 Msa0242820:CDS 45.0%
! TATTAAGGGCACACGTATCC+AGG + chr2_2:19293230-19293249 Msa0242820:intron 45.0%
! ATTAAGGGCACACGTATCCA+GGG + chr2_2:19293231-19293250 Msa0242820:intron 45.0%
CTTTACCTTCTTATGGCCGA+GGG + chr2_2:19293600-19293619 Msa0242820:CDS 45.0%
AAGCTCTTGTATCTTCCGTC+AGG - chr2_2:19293635-19293654 None:intergenic 45.0%
TGGTAACCAGTTGGAAGATG+TGG + chr2_2:19293661-19293680 Msa0242820:CDS 45.0%
! ATGGCAATGGAATGGTTTGG+TGG + chr2_2:19293811-19293830 Msa0242820:CDS 45.0%
!! TGGCAATGGAATGGTTTGGT+GGG + chr2_2:19293812-19293831 Msa0242820:CDS 45.0%
ATGAGGACGACTGTGGTTAA+GGG - chr2_2:19293856-19293875 None:intergenic 45.0%
GGTACTATACCGGCAGTATA+AGG - chr2_2:19294107-19294126 None:intergenic 45.0%
TATACTGCCGGTATAGTACC+AGG + chr2_2:19294107-19294126 Msa0242820:CDS 45.0%
! GGCATTGCCATTTCACAATG+AGG - chr2_2:19294166-19294185 None:intergenic 45.0%
CATGCTTGTGTCCAACTATG+AGG + chr2_2:19294235-19294254 Msa0242820:intron 45.0%
!! CCGTGTTTTTGCCTCATAGT+TGG - chr2_2:19294249-19294268 None:intergenic 45.0%
TAGCTTACCAAACCTTGGTG+AGG + chr2_2:19294516-19294535 Msa0242820:intron 45.0%
AGCTTACCAAACCTTGGTGA+GGG + chr2_2:19294517-19294536 Msa0242820:intron 45.0%
!! ACCGGCTCTGCTATTTCATT+TGG + chr2_2:19294726-19294745 Msa0242820:CDS 45.0%
AGAACAACCAAAGGAAGAGG+TGG + chr2_2:19294828-19294847 Msa0242820:CDS 45.0%
ACAATTGCTGGAAGCTTGAG+TGG + chr2_2:19295014-19295033 Msa0242820:CDS 45.0%
! TGTCTCGGGATTTTCAGACT+CGG + chr2_2:19295127-19295146 Msa0242820:CDS 45.0%
GGGTTACCAAGTTCTTGACA+AGG - chr2_2:19295164-19295183 None:intergenic 45.0%
!! AAACACTGGATTGGCGTAAG+TGG + chr2_2:19295264-19295283 Msa0242820:three_prime_UTR 45.0%
! GTGCGAGTGTTGTAAATCCT+TGG + chr2_2:19295297-19295316 Msa0242820:three_prime_UTR 45.0%
!!! TTTTTTATATATTTTTCTTT+TGG - chr2_2:19287103-19287122 None:intergenic 5.0%
!! AATATATAAAAAAAAAAGTT+CGG + chr2_2:19287110-19287129 Msa0242820:intron 5.0%
GTCTCCTACAGAAGAAGGCA+TGG + chr2_2:19285226-19285245 Msa0242820:CDS 50.0%
!! ATCGAAGAGCACCTGACCAA+AGG + chr2_2:19285824-19285843 Msa0242820:intron 50.0%
! GTTTTTCTCTGGTGTACCGG+GGG - chr2_2:19286007-19286026 None:intergenic 50.0%
! GGTTTTTCTCTGGTGTACCG+GGG - chr2_2:19286008-19286027 None:intergenic 50.0%
TTTGCTTCGAGATCGGGAGT+CGG - chr2_2:19286063-19286082 None:intergenic 50.0%
!!! TGTGCTGGTTTTCGATGGGT+CGG - chr2_2:19286091-19286110 None:intergenic 50.0%
AGAGCTAGTGACGACGAACA+TGG + chr2_2:19286234-19286253 Msa0242820:intron 50.0%
GTTGGGGTCATTTCCTTTGG+AGG - chr2_2:19286279-19286298 None:intergenic 50.0%
GCGTAGTGATGCAATGATGG+TGG - chr2_2:19286410-19286429 None:intergenic 50.0%
ACGGCGTAGTGATGCAATGA+TGG - chr2_2:19286413-19286432 None:intergenic 50.0%
GCATACCAACACGACCCAAA+AGG + chr2_2:19286628-19286647 Msa0242820:intron 50.0%
ACCAAACTCAACCACACCTC+CGG + chr2_2:19286885-19286904 Msa0242820:intron 50.0%
! TCTTTTGTGAGCCCACTGTG+TGG - chr2_2:19287045-19287064 None:intergenic 50.0%
AAGTTCGGCCACCAAAACAG+CGG + chr2_2:19287125-19287144 Msa0242820:intron 50.0%
TTCGTAGCTGTTTGGGTGGT+TGG - chr2_2:19287246-19287265 None:intergenic 50.0%
AACCACCCAAACAGCTACGA+AGG + chr2_2:19287245-19287264 Msa0242820:intron 50.0%
CAGCTCCTTCGTAGCTGTTT+GGG - chr2_2:19287253-19287272 None:intergenic 50.0%
ACAGCTCCTTCGTAGCTGTT+TGG - chr2_2:19287254-19287273 None:intergenic 50.0%
AAGGAGCTGTCTGTCGACAA+AGG + chr2_2:19287264-19287283 Msa0242820:intron 50.0%
GTCTGTCGACAAAGGACAAG+AGG + chr2_2:19287272-19287291 Msa0242820:intron 50.0%
GATGCAGATCTAAGAGAGGG+TGG - chr2_2:19287415-19287434 None:intergenic 50.0%
CCACGATGCAGATCTAAGAG+AGG - chr2_2:19287419-19287438 None:intergenic 50.0%
CCTCTCTTAGATCTGCATCG+TGG + chr2_2:19287416-19287435 Msa0242820:intron 50.0%
GGGGAAAAGAACTGCTGAAG+AGG + chr2_2:19287456-19287475 Msa0242820:intron 50.0%
AGAACTGCTGAAGAGGGGTT+TGG + chr2_2:19287463-19287482 Msa0242820:intron 50.0%
GAACTGCTGAAGAGGGGTTT+GGG + chr2_2:19287464-19287483 Msa0242820:intron 50.0%
! CTGAAGAGGGGTTTGGGTTT+GGG + chr2_2:19287470-19287489 Msa0242820:intron 50.0%
!! ATTGGTCATGTACCGACTCG+TGG + chr2_2:19288477-19288496 Msa0242820:intron 50.0%
! GTATCGGTGCAAGATACGCA+GGG - chr2_2:19288831-19288850 None:intergenic 50.0%
!! GGGAAGTATCAGGCAGGTAT+CGG - chr2_2:19288847-19288866 None:intergenic 50.0%
! CGGGACGTATCGGAAAGTAT+CGG - chr2_2:19288927-19288946 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr2_2:19289934-19289953 Msa0242820:intron 50.0%
TCATGGAGAAGATGCTAGCC+TGG - chr2_2:19290088-19290107 None:intergenic 50.0%
TGCCACCATTCTATACCACC+TGG + chr2_2:19290935-19290954 Msa0242820:intron 50.0%
TGCCAGGTGGTATAGAATGG+TGG - chr2_2:19290940-19290959 None:intergenic 50.0%
CAGTGCCAGGTGGTATAGAA+TGG - chr2_2:19290943-19290962 None:intergenic 50.0%
GAGAGAGAGAGAGAAGAAGC+AGG - chr2_2:19291828-19291847 None:intergenic 50.0%
CTCAGGTCAAAGCTGGCAAA+AGG - chr2_2:19291934-19291953 None:intergenic 50.0%
GCATCTTCTCAGGTCAAAGC+TGG - chr2_2:19291941-19291960 None:intergenic 50.0%
ACACATACACGTGATCAGCG+CGG - chr2_2:19292613-19292632 None:intergenic 50.0%
ATAGAGACACTGTGTGGCCT+AGG - chr2_2:19292817-19292836 None:intergenic 50.0%
TCTATGTGCCACCAGGAAAC+TGG + chr2_2:19292941-19292960 Msa0242820:CDS 50.0%
CTACCAGTAAGCCAGTTTCC+TGG - chr2_2:19292955-19292974 None:intergenic 50.0%
TGAGACGCTTGTCACCTTCA+AGG + chr2_2:19293290-19293309 Msa0242820:intron 50.0%
GCTTTACCTTCTTATGGCCG+AGG + chr2_2:19293599-19293618 Msa0242820:CDS 50.0%
TCTTTCCCTCGGCCATAAGA+AGG - chr2_2:19293608-19293627 None:intergenic 50.0%
CGTCAGGAACATCTTTCCCT+CGG - chr2_2:19293619-19293638 None:intergenic 50.0%
CGAGGGAAAGATGTTCCTGA+CGG + chr2_2:19293617-19293636 Msa0242820:CDS 50.0%
!! ATGGAATGGTTTGGTGGGAC+TGG + chr2_2:19293817-19293836 Msa0242820:CDS 50.0%
GATGAGGACGACTGTGGTTA+AGG - chr2_2:19293857-19293876 None:intergenic 50.0%
ACAGGGTGGATGCTATATGC+TGG - chr2_2:19293939-19293958 None:intergenic 50.0%
GCATCCACCCTGTTTATTGC+AGG + chr2_2:19293946-19293965 Msa0242820:CDS 50.0%
GCAGTATAAGGGGATTCTGG+AGG - chr2_2:19294095-19294114 None:intergenic 50.0%
CCAGAATCCCCTTATACTGC+CGG + chr2_2:19294095-19294114 Msa0242820:CDS 50.0%
!! ACGATACTGACTCTGACTCG+TGG + chr2_2:19294278-19294297 Msa0242820:intron 50.0%
AAGTGACCCTCACCAAGGTT+TGG - chr2_2:19294526-19294545 None:intergenic 50.0%
TAGCTAAGTGACCCTCACCA+AGG - chr2_2:19294531-19294550 None:intergenic 50.0%
!! ACTGGATTGGCGTAAGTGGT+TGG + chr2_2:19295268-19295287 Msa0242820:three_prime_UTR 50.0%
! ATGGCTCCGTTTTCGGTGGA+AGG + chr2_2:19285194-19285213 Msa0242820:CDS 55.0%
ACCATACCTTGCGTCTTGCG+GGG - chr2_2:19285590-19285609 None:intergenic 55.0%
GACCATACCTTGCGTCTTGC+GGG - chr2_2:19285591-19285610 None:intergenic 55.0%
CGACCATACCTTGCGTCTTG+CGG - chr2_2:19285592-19285611 None:intergenic 55.0%
GTGCTCTTTCGGTAGATCGG+AGG - chr2_2:19285876-19285895 None:intergenic 55.0%
TTGCTTCGAGATCGGGAGTC+GGG - chr2_2:19286062-19286081 None:intergenic 55.0%
TGAGGAGGCGGGTGTTTGTT+GGG - chr2_2:19286296-19286315 None:intergenic 55.0%
! GTGGTGATGATGTGTGGTGG+TGG - chr2_2:19286332-19286351 None:intergenic 55.0%
! GTGGTGGTGATGATGTGTGG+TGG - chr2_2:19286335-19286354 None:intergenic 55.0%
!! GTGGTGGTGGTGATGATGTG+TGG - chr2_2:19286338-19286357 None:intergenic 55.0%
!! TGGTGATGTAGTGGTGGTGG+AGG - chr2_2:19286374-19286393 None:intergenic 55.0%
!! ATGATGGTGGTGGTGATGCG+CGG - chr2_2:19286397-19286416 None:intergenic 55.0%
!! CGCTGCCCGTGTTTTGTTGT+AGG - chr2_2:19286496-19286515 None:intergenic 55.0%
!! GCAGCGACGCTGGTTTGAAA+CGG + chr2_2:19286510-19286529 Msa0242820:intron 55.0%
AAAGGTGGCTGCCTGTGACA+AGG + chr2_2:19286553-19286572 Msa0242820:intron 55.0%
GGCTGCCTGTGACAAGGAAA+AGG + chr2_2:19286559-19286578 Msa0242820:intron 55.0%
! GGACGCCTTTTCCTTGTCAC+AGG - chr2_2:19286567-19286586 None:intergenic 55.0%
!! AAGGAAAAGGCGTCCGACAC+CGG + chr2_2:19286572-19286591 Msa0242820:intron 55.0%
!! TGGGTCCTTTTGGGTCGTGT+TGG - chr2_2:19286636-19286655 None:intergenic 55.0%
GTGTGTCTGGTGCAACTTGG+AGG - chr2_2:19286794-19286813 None:intergenic 55.0%
GGTGCAAGCACCCACAATGA+AGG + chr2_2:19286911-19286930 Msa0242820:intron 55.0%
CTGTTTCGTGGGTCTGTCAG+TGG - chr2_2:19287196-19287215 None:intergenic 55.0%
ACCCACGAAACAGAACCGCA+AGG + chr2_2:19287203-19287222 Msa0242820:intron 55.0%
CCCTTGCGGTTCTGTTTCGT+GGG - chr2_2:19287207-19287226 None:intergenic 55.0%
CCCACGAAACAGAACCGCAA+GGG + chr2_2:19287204-19287223 Msa0242820:intron 55.0%
TCCCTTGCGGTTCTGTTTCG+TGG - chr2_2:19287208-19287227 None:intergenic 55.0%
!! GGGTGGTTGGTTTCGAGCTT+GGG - chr2_2:19287233-19287252 None:intergenic 55.0%
!! TGGGTGGTTGGTTTCGAGCT+TGG - chr2_2:19287234-19287253 None:intergenic 55.0%
CTCCTTCGTAGCTGTTTGGG+TGG - chr2_2:19287250-19287269 None:intergenic 55.0%
! CGTTGATTACCTCCCTCCTC+CGG - chr2_2:19287365-19287384 None:intergenic 55.0%
CGGAGGAGGGAGGTAATCAA+CGG + chr2_2:19287363-19287382 Msa0242820:intron 55.0%
AGGAGGGAGGTAATCAACGG+TGG + chr2_2:19287366-19287385 Msa0242820:intron 55.0%
! GCTGAAGAGGGGTTTGGGTT+TGG + chr2_2:19287469-19287488 Msa0242820:intron 55.0%
!! GGTATCGGTGCAAGATACGC+AGG - chr2_2:19288832-19288851 None:intergenic 55.0%
!! CGTATCGGGAAGTATCAGGC+AGG - chr2_2:19288853-19288872 None:intergenic 55.0%
!! CCGTGAGTATCGGGACGTAT+CGG - chr2_2:19288937-19288956 None:intergenic 55.0%
CCGATACGTCCCGATACTCA+CGG + chr2_2:19288934-19288953 Msa0242820:intron 55.0%
ACTCACTTTCGGCTCAGGAG+AGG - chr2_2:19289469-19289488 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr2_2:19289938-19289957 Msa0242820:intron 55.0%
TTGTACTACTCCCTCCGTCC+CGG - chr2_2:19289951-19289970 None:intergenic 55.0%
CCTGGCAGCATTCACTTGAC+AGG - chr2_2:19290070-19290089 None:intergenic 55.0%
CCTGTCAAGTGAATGCTGCC+AGG + chr2_2:19290067-19290086 Msa0242820:intron 55.0%
ACTAGAAGGGGTCGAGCATG+TGG - chr2_2:19290153-19290172 None:intergenic 55.0%
CCAGTAAGCCAGTTTCCTGG+TGG - chr2_2:19292952-19292971 None:intergenic 55.0%
! CCACCAGGAAACTGGCTTAC+TGG + chr2_2:19292949-19292968 Msa0242820:CDS 55.0%
CAACGAGATGAGGACGACTG+TGG - chr2_2:19293863-19293882 None:intergenic 55.0%
CCGGCAGTATAAGGGGATTC+TGG - chr2_2:19294098-19294117 None:intergenic 55.0%
TACCTTGCGTCTTGCGGGGA+TGG - chr2_2:19285586-19285605 None:intergenic 60.0%
TCCCCGCAAGACGCAAGGTA+TGG + chr2_2:19285586-19285605 Msa0242820:intron 60.0%
! TGGGGGTGAGTGGTGACGAT+GGG - chr2_2:19285759-19285778 None:intergenic 60.0%
! TTGGGGGTGAGTGGTGACGA+TGG - chr2_2:19285760-19285779 None:intergenic 60.0%
! GGGTGTTCTTTGGGGGTGAG+TGG - chr2_2:19285769-19285788 None:intergenic 60.0%
GATCGGAGGTCGCGAGGTTA+TGG - chr2_2:19285862-19285881 None:intergenic 60.0%
!! CGAGGGGTGCCCTGCTAATT+TGG - chr2_2:19285984-19286003 None:intergenic 60.0%
TGCTTCGAGATCGGGAGTCG+GGG - chr2_2:19286061-19286080 None:intergenic 60.0%
! GAGGAGGCGGGTGTTTGTTG+GGG - chr2_2:19286295-19286314 None:intergenic 60.0%
GTGAGGAGGCGGGTGTTTGT+TGG - chr2_2:19286297-19286316 None:intergenic 60.0%
! CGGTGGTGATGTAGTGGTGG+TGG - chr2_2:19286377-19286396 None:intergenic 60.0%
! GATGCGCGGTGGTGATGTAG+TGG - chr2_2:19286383-19286402 None:intergenic 60.0%
! GCCGGAGGTGTGGTTGAGTT+TGG - chr2_2:19286889-19286908 None:intergenic 60.0%
ACTCAACCACACCTCCGGCA+AGG + chr2_2:19286890-19286909 Msa0242820:intron 60.0%
TGTGGGTGCTTGCACCTTGC+CGG - chr2_2:19286907-19286926 None:intergenic 60.0%
TTCGGCCACCAAAACAGCGG+TGG + chr2_2:19287128-19287147 Msa0242820:intron 60.0%
! TGTTCGCGCCACCGCTGTTT+TGG - chr2_2:19287139-19287158 None:intergenic 60.0%
TCGAGCTTGGGTGTCCCTTG+CGG - chr2_2:19287221-19287240 None:intergenic 60.0%
!! ACTGATGAACCAAGCGCCGG+AGG + chr2_2:19287346-19287365 Msa0242820:intron 60.0%
!! ATGAACCAAGCGCCGGAGGA+GGG + chr2_2:19287350-19287369 Msa0242820:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr2_2:19289937-19289956 Msa0242820:intron 60.0%
GGTGGTGCCCACTCCAATCA+TGG - chr2_2:19290105-19290124 None:intergenic 60.0%
! AAAGTCGTGCTGGCAGTGCC+AGG - chr2_2:19290956-19290975 None:intergenic 60.0%
GCTCAGCTCTATGTGCCACC+AGG + chr2_2:19292934-19292953 Msa0242820:CDS 60.0%
! TGAGTGGTGACGATGGGCGG+TGG - chr2_2:19285753-19285772 None:intergenic 65.0%
! GGGTGAGTGGTGACGATGGG+CGG - chr2_2:19285756-19285775 None:intergenic 65.0%
TCGGTAGATCGGAGGTCGCG+AGG - chr2_2:19285868-19285887 None:intergenic 65.0%
! GCGCGGTGGTGATGTAGTGG+TGG - chr2_2:19286380-19286399 None:intergenic 65.0%
!! ATGGTGGTGGTGATGCGCGG+TGG - chr2_2:19286394-19286413 None:intergenic 65.0%
CAAAACACGGGCAGCGACGC+TGG + chr2_2:19286500-19286519 Msa0242820:intron 65.0%
GCGTAGACGCTCCGTGTTGG+CGG - chr2_2:19286691-19286710 None:intergenic 65.0%
GGTGCGTAGACGCTCCGTGT+TGG - chr2_2:19286694-19286713 None:intergenic 65.0%
CTTGCACCTTGCCGGAGGTG+TGG - chr2_2:19286899-19286918 None:intergenic 65.0%
!! TCGCGCCACCGCTGTTTTGG+TGG - chr2_2:19287136-19287155 None:intergenic 65.0%
CAACCCCAAACTCCGGCGAG+CGG + chr2_2:19287166-19287185 Msa0242820:intron 65.0%
TCGACCGCTCGCCGGAGTTT+GGG - chr2_2:19287173-19287192 None:intergenic 65.0%
!! GATGAACCAAGCGCCGGAGG+AGG + chr2_2:19287349-19287368 Msa0242820:intron 65.0%
CGCCATCCCCGCAAGACGCA+AGG + chr2_2:19285581-19285600 Msa0242820:intron 70.0%
! GTGGTGACGATGGGCGGTGG+TGG - chr2_2:19285750-19285769 None:intergenic 70.0%
TCTGGTGTACCGGGGGCGAG+GGG - chr2_2:19286000-19286019 None:intergenic 70.0%
CTCTGGTGTACCGGGGGCGA+GGG - chr2_2:19286001-19286020 None:intergenic 70.0%
TCTCTGGTGTACCGGGGGCG+AGG - chr2_2:19286002-19286021 None:intergenic 70.0%
GGGTGCTTGCACCTTGCCGG+AGG - chr2_2:19286904-19286923 None:intergenic 70.0%
! CGCTCGCCGGAGTTTGGGGT+TGG - chr2_2:19287168-19287187 None:intergenic 70.0%
CGACCGCTCGCCGGAGTTTG+GGG - chr2_2:19287172-19287191 None:intergenic 70.0%
GTCGACCGCTCGCCGGAGTT+TGG - chr2_2:19287174-19287193 None:intergenic 70.0%
GTCAGTGGTCGACCGCTCGC+CGG - chr2_2:19287181-19287200 None:intergenic 70.0%
!! AACCAAGCGCCGGAGGAGGG+AGG + chr2_2:19287353-19287372 Msa0242820:intron 70.0%
TACCTCCCTCCTCCGGCGCT+TGG - chr2_2:19287358-19287377 None:intergenic 70.0%
! GTCGTGCTGGCAGTGCCAGG+TGG - chr2_2:19290953-19290972 None:intergenic 70.0%
!! AGCAGGGCACCCCTCGCCCC+CGG + chr2_2:19285988-19286007 Msa0242820:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 19285194 19295741 19285194 ID=Msa0242820;Name=Msa0242820
chr2_2 mRNA 19285194 19295741 19285194 ID=Msa0242820-mRNA-1;Parent=Msa0242820;Name=Msa0242820-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.8|0.83|0.83|1|1|6|491|468
chr2_2 exon 19285194 19285247 19285194 ID=Msa0242820-mRNA-1:exon:7807;Parent=Msa0242820-mRNA-1
chr2_2 exon 19292727 19293038 19292727 ID=Msa0242820-mRNA-1:exon:7808;Parent=Msa0242820-mRNA-1
chr2_2 exon 19293572 19293692 19293572 ID=Msa0242820-mRNA-1:exon:7809;Parent=Msa0242820-mRNA-1
chr2_2 exon 19293793 19293967 19293793 ID=Msa0242820-mRNA-1:exon:7810;Parent=Msa0242820-mRNA-1
chr2_2 exon 19294058 19294128 19294058 ID=Msa0242820-mRNA-1:exon:7811;Parent=Msa0242820-mRNA-1
chr2_2 exon 19294577 19295741 19294577 ID=Msa0242820-mRNA-1:exon:7812;Parent=Msa0242820-mRNA-1
chr2_2 CDS 19285194 19285247 19285194 ID=Msa0242820-mRNA-1:cds;Parent=Msa0242820-mRNA-1
chr2_2 CDS 19292727 19293038 19292727 ID=Msa0242820-mRNA-1:cds;Parent=Msa0242820-mRNA-1
chr2_2 CDS 19293572 19293692 19293572 ID=Msa0242820-mRNA-1:cds;Parent=Msa0242820-mRNA-1
chr2_2 CDS 19293793 19293967 19293793 ID=Msa0242820-mRNA-1:cds;Parent=Msa0242820-mRNA-1
chr2_2 CDS 19294058 19294128 19294058 ID=Msa0242820-mRNA-1:cds;Parent=Msa0242820-mRNA-1
chr2_2 CDS 19294577 19295250 19294577 ID=Msa0242820-mRNA-1:cds;Parent=Msa0242820-mRNA-1
chr2_2 three_prime_UTR 19295251 19295741 19295251 ID=Msa0242820-mRNA-1:three_prime_utr;Parent=Msa0242820-mRNA-1
Gene Sequence

>Msa0242820

ATGGCTCCGTTTTCGGTGGAAGGCCTTAATAGGTCTCCTACAGAAGAAGGCATGGTGGCATTGCTCTTGCTTCTTGCATTGAGCAATGCCGTGAATGTTTATGGAGATGTTGAGATATGTCGTTTGAATCCTAAATTGGATCCTAGGCCACACAGTGTCTCTATATTGGAATTTGGTGCAGTTGGAGATGGTAAAACACTGAATACAATTGCATTCCAGAATGCAATTTTCTATCTCAAGTCATTTGCTGATAAGGGTGGTGCTCAGCTCTATGTGCCACCAGGAAACTGGCTTACTGGTAGTTTCAATCTTACTAGCCATCTCACCCTCTTTTTGGAAAAAGGTGCTGTCATTATTGGATCTCAGGATCCATCTCATTGGAATGTTATTGAAGCTTTACCTTCTTATGGCCGAGGGAAAGATGTTCCTGACGGAAGATACAAGAGCTTGATAAATGGTAACCAGTTGGAAGATGTGGTCATAACAGGCAATAATGGAACCATTGATGGCAATGGAATGGTTTGGTGGGACTGGTTTAAGTCTCATTCCCTTAACCACAGTCGTCCTCATCTCGTTGAAATTATATCATCTGATTTTGTGGTAGTTTCAAATCTTACATTCTTGAATGCTCCAGCATATAGCATCCACCCTGTTTATTGCAGCAATGTACATATTCAAAACATTTCAATCTCTACTCCTCCAGAATCCCCTTATACTGCCGGTATAGTACCAGATTCTTCTGATAATGTTTGTATAGAAGATTGTTATGTTTCCATTGGTTTTGACGCAATTTCTCTCAAAAGTGGATGGGATCAGTACGGCATTAAATATGGAAGACCAAGTGAGAAAGTACATATAAGAAGGGTTCATCTTCGTGCATTTACCGGCTCTGCTATTTCATTTGGTACTGAAATGTCTGGTGGAATTTCAAAAGTCCTGATAGAGCATGTTAACATTTTCAACTCAAATAGTGGCATTGAGTTCAGAACAACCAAAGGAAGAGGTGGTTACATAAAAGAAATTGCTTTATCACACATAGAAATGGAAAATGTTTATACAGCAATTTCAGCTAAAGGTAATTCTGGTTCTCATCCTGATGACAAATTTGATCCAAAAGCACTTCCACTTTTGCATCACATAACATTGAAGGATATAACTGGAAAGAATATCACAATTGCTGGAAGCTTGAGTGGAATAGAAGAATCACCCTTCACAAACATATGCCTTTCAAATATAACCTTGTCTACAAATTCCGTTTCTTCAAGTAAATGGGAATGTTCAAATGTCTCGGGATTTTCAGACTCGGTGTTGCCTAAACCTTGTCAAGAACTTGGTAACCCTTCAAATTCTTCTTCGTCATCGTGTTACTACCTCATGAGTCTCGGTCAAAATACTGCAGCGATTTAA
Protein sequence

>Msa0242820

MAPFSVEGLNRSPTEEGMVALLLLLALSNAVNVYGDVEICRLNPKLDPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGNWLTGSFNLTSHLTLFLEKGAVIIGSQDPSHWNVIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMVWWDWFKSHSLNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPPESPYTAGIVPDSSDNVCIEDCYVSIGFDAISLKSGWDQYGIKYGRPSEKVHIRRVHLRAFTGSAISFGTEMSGGISKVLIEHVNIFNSNSGIEFRTTKGRGGYIKEIALSHIEMENVYTAISAKGNSGSHPDDKFDPKALPLLHHITLKDITGKNITIAGSLSGIEESPFTNICLSNITLSTNSVSSSKWECSNVSGFSDSVLPKPCQELGNPSNSSSSSCYYLMSLGQNTAAI*