AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1042520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1042520 MtrunA17_Chr7g0254701 98.502 267 4 0 1 267 1 267 0.0 536
Msa1042520 MtrunA17_Chr4g0060351 36.029 136 87 0 13 148 7 142 2.69e-29 108
Msa1042520 MtrunA17_Chr8g0362321 35.294 136 88 0 13 148 7 142 2.74e-29 108
Msa1042520 MtrunA17_Chr2g0316211 38.158 152 90 1 4 155 3 150 5.07e-29 107
Msa1042520 MtrunA17_Chr2g0316201 37.500 152 91 1 4 155 3 150 2.93e-28 105
Msa1042520 MtrunA17_Chr3g0131871 35.338 133 85 1 29 160 22 154 1.85e-26 102
Msa1042520 MtrunA17_Chr3g0108261 34.965 143 93 0 13 155 4 146 5.38e-25 97.1
Msa1042520 MtrunA17_Chr5g0432831 34.965 143 93 0 13 155 4 146 5.38e-25 97.1
Msa1042520 MtrunA17_Chr1g0154011 34.965 143 93 0 13 155 4 146 5.98e-25 97.1
Msa1042520 MtrunA17_Chr7g0275361 34.266 143 94 0 13 155 4 146 2.49e-24 95.5
Msa1042520 MtrunA17_Chr8g0369311 34.266 143 94 0 13 155 60 202 5.78e-24 95.9
Msa1042520 MtrunA17_Chr4g0037011 34.532 139 91 0 13 151 4 142 7.37e-24 94.0
Msa1042520 MtrunA17_Chr3g0139901 35.570 149 92 3 14 158 7 155 9.83e-24 94.0
Msa1042520 MtrunA17_Chr1g0199951 32.192 146 95 3 10 152 41 185 1.90e-18 80.9
Msa1042520 MtrunA17_Chr8g0378601 29.921 127 89 0 13 139 25 151 3.65e-18 79.7
Msa1042520 MtrunA17_Chr4g0053191 35.849 106 66 1 46 149 45 150 6.25e-18 78.6
Msa1042520 MtrunA17_Chr4g0038891 30.968 155 99 2 3 150 18 171 2.54e-17 77.4
Msa1042520 MtrunA17_Chr5g0396451 31.915 141 95 1 10 150 32 171 6.65e-17 76.3
Msa1042520 MtrunA17_Chr5g0401831 30.986 142 91 3 14 148 8 149 7.42e-17 75.9
Msa1042520 MtrunA17_Chr8g0348701 27.344 128 91 2 31 156 21 148 2.60e-16 75.1
Msa1042520 MtrunA17_Chr8g0387131 28.125 128 90 2 31 156 21 148 4.99e-16 74.3
Msa1042520 MtrunA17_Chr4g0059291 25.600 125 91 2 36 158 26 150 9.62e-13 65.1
Msa1042520 MtrunA17_Chr5g0403591 33.684 95 63 0 54 148 72 166 2.02e-12 64.3
Msa1042520 MtrunA17_Chr4g0031181 25.397 126 81 1 33 145 28 153 2.53e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1042520 AT5G05080.2 68.539 267 68 2 1 267 1 251 2.08e-128 364
Msa1042520 AT5G05080.3 68.539 267 68 2 1 267 1 251 2.08e-128 364
Msa1042520 AT5G05080.1 68.539 267 68 2 1 267 1 251 2.08e-128 364
Msa1042520 AT5G05080.4 68.539 267 68 2 1 267 1 251 2.08e-128 364
Msa1042520 AT2G02760.1 35.294 136 88 0 13 148 7 142 8.88e-29 107
Msa1042520 AT2G02760.2 35.294 136 88 0 13 148 7 142 8.88e-29 107
Msa1042520 AT2G02760.4 35.294 136 88 0 13 148 7 142 8.88e-29 107
Msa1042520 AT2G02760.3 35.294 136 88 0 13 148 7 142 8.88e-29 107
Msa1042520 AT1G14400.1 35.294 136 88 0 13 148 7 142 1.17e-28 107
Msa1042520 AT1G14400.2 35.294 136 88 0 13 148 7 142 1.17e-28 107
Msa1042520 AT1G78870.2 37.500 152 91 1 4 155 3 150 6.73e-28 105
Msa1042520 AT1G16890.2 36.842 152 92 1 4 155 3 150 1.87e-27 103
Msa1042520 AT5G50870.1 33.793 145 94 2 14 156 6 150 1.96e-26 102
Msa1042520 AT5G62540.1 35.338 133 86 0 13 145 7 139 3.25e-26 100
Msa1042520 AT1G16890.3 34.591 159 95 2 4 155 3 159 2.07e-25 99.0
Msa1042520 AT4G27960.1 34.266 143 94 0 13 155 4 146 7.51e-25 97.1
Msa1042520 AT5G41700.5 34.965 143 93 0 13 155 4 146 8.80e-25 97.1
Msa1042520 AT5G41700.2 34.965 143 93 0 13 155 4 146 8.80e-25 97.1
Msa1042520 AT5G41700.1 34.965 143 93 0 13 155 4 146 8.80e-25 97.1
Msa1042520 AT5G53300.2 34.266 143 94 0 13 155 4 146 1.46e-24 96.3
Msa1042520 AT5G53300.4 34.266 143 94 0 13 155 4 146 1.46e-24 96.3
Msa1042520 AT5G53300.1 34.266 143 94 0 13 155 4 146 1.46e-24 96.3
Msa1042520 AT1G64230.2 33.566 143 95 0 13 155 4 146 1.96e-24 95.9
Msa1042520 AT1G64230.1 33.566 143 95 0 13 155 4 146 1.96e-24 95.9
Msa1042520 AT2G16740.1 34.965 143 93 0 13 155 4 146 3.58e-24 95.1
Msa1042520 AT3G08690.2 33.566 143 95 0 13 155 4 146 6.14e-24 94.7
Msa1042520 AT3G08690.1 33.566 143 95 0 13 155 4 146 6.14e-24 94.7
Msa1042520 AT5G41700.4 35.862 145 90 2 13 155 4 147 1.17e-23 94.0
Msa1042520 AT5G56150.1 32.867 143 96 0 13 155 4 146 1.34e-23 94.0
Msa1042520 AT1G78870.3 40.909 110 61 1 4 113 3 108 1.42e-23 92.4
Msa1042520 AT4G27960.2 34.266 143 94 0 13 155 34 176 2.01e-23 94.4
Msa1042520 AT1G64230.3 32.895 152 93 2 13 155 4 155 2.45e-23 93.2
Msa1042520 AT5G50870.2 31.410 156 94 3 14 156 6 161 2.57e-23 94.7
Msa1042520 AT1G16890.1 40.909 110 65 0 46 155 8 117 4.04e-23 91.7
Msa1042520 AT1G78870.4 40.909 110 65 0 46 155 8 117 5.31e-23 91.3
Msa1042520 AT3G24515.1 37.342 158 86 3 14 158 10 167 1.24e-22 96.3
Msa1042520 AT5G25760.1 37.302 126 76 2 14 136 7 132 2.13e-22 90.9
Msa1042520 AT5G25760.2 37.302 126 76 2 14 136 7 132 2.13e-22 90.9
Msa1042520 AT3G13550.1 30.556 144 100 0 13 156 39 182 5.91e-22 90.5
Msa1042520 AT1G36340.2 40.351 114 68 0 44 157 41 154 1.07e-21 89.0
Msa1042520 AT1G36340.1 40.351 114 68 0 44 157 41 154 1.07e-21 89.0
Msa1042520 AT3G08700.2 31.944 144 97 1 13 155 4 147 1.60e-21 88.2
Msa1042520 AT3G08700.1 31.944 144 97 1 13 155 4 147 1.60e-21 88.2
Msa1042520 AT1G78870.1 40.541 111 65 1 46 155 8 118 3.49e-21 86.7
Msa1042520 AT5G41700.3 37.500 104 65 0 13 116 4 107 3.88e-21 87.0
Msa1042520 AT3G24515.3 36.842 133 77 2 30 158 63 192 2.01e-20 90.5
Msa1042520 AT3G13550.2 32.143 112 76 0 13 124 39 150 7.41e-20 84.3
Msa1042520 AT5G53300.3 36.893 103 65 0 13 115 4 106 9.04e-20 82.4
Msa1042520 AT5G56150.2 35.849 106 68 0 13 118 4 109 9.24e-20 82.4
Msa1042520 AT1G64230.5 35.714 112 72 0 44 155 77 188 1.12e-19 84.7
Msa1042520 AT1G64230.4 35.714 112 72 0 44 155 77 188 1.12e-19 84.7
Msa1042520 AT3G20060.1 33.333 141 93 1 10 150 36 175 4.14e-18 80.1
Msa1042520 AT1G50490.1 34.043 141 92 1 10 150 35 174 1.98e-17 78.2
Msa1042520 AT3G20060.2 34.426 122 79 1 29 150 10 130 4.06e-16 73.6
Msa1042520 AT1G63800.1 28.462 130 91 2 31 158 21 150 4.18e-16 74.7
Msa1042520 AT1G63800.2 28.462 130 91 2 31 158 6 135 4.20e-16 74.3
Msa1042520 AT3G57870.1 30.070 143 93 3 14 149 9 151 1.23e-15 72.8
Msa1042520 AT5G41340.1 27.344 128 91 2 31 156 21 148 8.77e-15 71.2
Msa1042520 AT2G46030.5 28.125 128 90 2 31 156 21 148 4.26e-14 69.3
Msa1042520 AT2G46030.1 28.125 128 90 2 31 156 21 148 4.26e-14 69.3
Msa1042520 AT2G18600.1 33.043 115 74 1 49 160 69 183 8.96e-14 68.6
Msa1042520 AT2G18600.2 33.043 115 74 1 49 160 69 183 8.96e-14 68.6
Msa1042520 AT2G46030.4 28.125 128 90 2 31 156 24 151 1.02e-13 68.2
Msa1042520 AT2G46030.2 28.125 128 90 2 31 156 24 151 1.02e-13 68.2
Msa1042520 AT4G36800.2 30.986 142 92 3 14 152 34 172 2.35e-13 67.4
Msa1042520 AT4G36800.1 30.986 142 92 3 14 152 34 172 2.35e-13 67.4
Msa1042520 AT2G46030.3 28.125 128 90 2 31 156 93 220 2.43e-13 68.6
Msa1042520 AT5G41340.2 28.571 105 73 2 54 156 9 113 7.13e-12 62.4
Msa1042520 AT2G32790.1 35.398 113 73 0 44 156 64 176 1.24e-11 62.4

Find 81 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCACTGTTGGCAATATT+TGG 0.133789 7_1:-80461808 None:intergenic
TTGTGTACTATTGATCTTTC+TGG 0.148256 7_1:+80462834 Msa1042520:three_prime_UTR
AAAACTAAGGCACAAATAAA+AGG 0.283841 7_1:-80462720 None:intergenic
GTCATTTACTGTTGATTACT+TGG 0.327343 7_1:+80462932 Msa1042520:three_prime_UTR
AGTTCATTTAAAGCTGATTC+TGG 0.328582 7_1:-80462040 None:intergenic
CACACACAAAAGAGGAGTTT+CGG 0.339105 7_1:-80459996 None:intergenic
TTGTGTCAACGCGCTCAAAA+AGG 0.346414 7_1:+80461834 Msa1042520:CDS
TCCTCTTGCTCCAGTGGTTG+AGG 0.353319 7_1:-80462499 None:intergenic
CCCATAATCAACAGGTTGTT+AGG 0.362147 7_1:+80461996 Msa1042520:intron
AGAATCAGCTTTAAATGAAC+TGG 0.367979 7_1:+80462042 Msa1042520:CDS
GCAAGTTGCCTTATCACATT+AGG 0.371102 7_1:-80461260 None:intergenic
TTGCAATTTGATAGAAAGAA+AGG 0.378430 7_1:+80462741 Msa1042520:three_prime_UTR
TGTGTACTATTGATCTTTCT+GGG 0.394804 7_1:+80462835 Msa1042520:three_prime_UTR
TCTATCAAATTGCAAAACTA+AGG 0.411937 7_1:-80462733 None:intergenic
CCTCTTGCTCCAGTGGTTGA+GGG 0.414800 7_1:-80462498 None:intergenic
ACACACAAAAGAGGAGTTTC+GGG 0.420365 7_1:-80459995 None:intergenic
AAGTGTTTGAGTAAAATTAG+AGG 0.432184 7_1:-80462955 None:intergenic
ATTCAGAGCAGTAGTTGATT+CGG 0.434687 7_1:-80462394 None:intergenic
TTTAAAGCTGATTCTGGAAA+CGG 0.436344 7_1:-80462034 None:intergenic
TTGTGAACTCTGAATTAGTT+CGG 0.442211 7_1:+80460746 Msa1042520:five_prime_UTR
AATATTTGGATGGAAAATCT+TGG 0.449656 7_1:-80461794 None:intergenic
GGAATCCTAGCCTTGGGTTA+CGG 0.454102 7_1:+80461860 Msa1042520:CDS
GGGGAAGGGATATGGGTAAT+GGG 0.460053 7_1:+80462798 Msa1042520:three_prime_UTR
AAGAGGAACTAGTCAGGATC+AGG 0.466133 7_1:+80462515 Msa1042520:CDS
AGGATTGGAATCCTAGCCTT+GGG 0.467861 7_1:+80461854 Msa1042520:CDS
CGGAAAACTCCACTCTCATA+AGG 0.469183 7_1:-80461476 None:intergenic
CTGTCATTGCCCTCAACCAC+TGG 0.475571 7_1:+80462489 Msa1042520:CDS
TTTCCACACTCTCCTCCTAA+AGG 0.481533 7_1:+80461524 Msa1042520:CDS
GACATCAAAACCATGCCGTC+AGG 0.481655 7_1:+80462450 Msa1042520:CDS
ATCTTCCGCCTAATGTGATA+AGG 0.491201 7_1:+80461252 Msa1042520:CDS
CTGCTCATGCACCACAAAAG+AGG 0.495555 7_1:+80462601 Msa1042520:CDS
ATCAACAGTAAATGACAGTA+AGG 0.500543 7_1:-80462925 None:intergenic
AACTTTAATGCCCTCAGGAG+GGG 0.501972 7_1:-80461309 None:intergenic
ACTAGTTCCTCTTGCTCCAG+TGG 0.503278 7_1:-80462505 None:intergenic
AAGGATTGGAATCCTAGCCT+TGG 0.504209 7_1:+80461853 Msa1042520:CDS
CACTGTTGGCAATATTTGGA+TGG 0.511422 7_1:-80461804 None:intergenic
GACACAAATCTCTCCACTGT+TGG 0.513774 7_1:-80461818 None:intergenic
TTTGCTGACATTGAAGGCCC+TGG 0.514631 7_1:+80461362 Msa1042520:CDS
ACTACTGCTTGAAAATTATG+AGG 0.514928 7_1:+80462072 Msa1042520:CDS
TTCGGAAGCTCCTCACTCCT+CGG 0.528489 7_1:+80460764 Msa1042520:five_prime_UTR
TATTTAAACACACCTTTAGG+AGG 0.530844 7_1:-80461536 None:intergenic
TGGAGCAAGAGGAACTAGTC+AGG 0.535304 7_1:+80462509 Msa1042520:CDS
CATTGGAACTGCTAAAGCTC+AGG 0.536497 7_1:+80462626 Msa1042520:CDS
TCAAAGCCGAAATTCAAAAG+TGG 0.539030 7_1:+80462363 Msa1042520:CDS
TAGTCAGGATCAGGCAGTAG+TGG 0.540085 7_1:+80462524 Msa1042520:CDS
CCCTCAACCACTGGAGCAAG+AGG 0.542063 7_1:+80462498 Msa1042520:CDS
CAGAGCAGCACCTGACGGCA+TGG 0.548312 7_1:-80462460 None:intergenic
ACGACAACTTTAATGCCCTC+AGG 0.561456 7_1:-80461314 None:intergenic
GCACCACAAAAGAGGGACAT+TGG 0.563104 7_1:+80462609 Msa1042520:CDS
TGCTCATGCACCACAAAAGA+GGG 0.567894 7_1:+80462602 Msa1042520:CDS
TAATGTTTCTTCTGCTGCCG+CGG 0.572323 7_1:+80462569 Msa1042520:CDS
TCAGCTTTAAATGAACTGGC+TGG 0.575529 7_1:+80462046 Msa1042520:CDS
TGTGATAAGGCAACTTGCCA+AGG 0.579080 7_1:+80461265 Msa1042520:CDS
AGGAGTATGCTAGACATGCC+AGG 0.585519 7_1:+80462092 Msa1042520:CDS
TACTTACCATCAGCAGCACA+AGG 0.588502 7_1:-80460812 None:intergenic
GGGTTCCCTTGTGCTGCTGA+TGG 0.593752 7_1:+80460806 Msa1042520:exon
TCTTGATGAAACCCCTCCTG+AGG 0.594622 7_1:+80461298 Msa1042520:CDS
AGTCAGGATCAGGCAGTAGT+GGG 0.598334 7_1:+80462525 Msa1042520:CDS
CAACTTTAATGCCCTCAGGA+GGG 0.602990 7_1:-80461310 None:intergenic
CATCCAAATATTGCCAACAG+TGG 0.613849 7_1:+80461805 Msa1042520:CDS
CTTGATGAAACCCCTCCTGA+GGG 0.614249 7_1:+80461299 Msa1042520:CDS
GCGATAGTTTCAACTTCATG+CGG 0.617025 7_1:-80461496 None:intergenic
AGTTCTGTCACCGAGGAGTG+AGG 0.617389 7_1:-80460774 None:intergenic
AGTTGCCTTATCACATTAGG+CGG 0.618457 7_1:-80461257 None:intergenic
GCTGCAACTCCTTATGAGAG+TGG 0.619407 7_1:+80461467 Msa1042520:intron
TAAGAATATGCCGTAACCCA+AGG 0.622851 7_1:-80461870 None:intergenic
ACAACTTTAATGCCCTCAGG+AGG 0.632908 7_1:-80461311 None:intergenic
GGTGGCAGAGCAGCACCTGA+CGG 0.636975 7_1:-80462465 None:intergenic
ACACCTTTAGGAGGAGAGTG+TGG 0.641291 7_1:-80461527 None:intergenic
AGAAACATTAGCAGACGACT+CGG 0.654224 7_1:-80462556 None:intergenic
GTGACAGAACTAAACAAAGA+GGG 0.657227 7_1:+80460786 Msa1042520:five_prime_UTR
GGTGACAGAACTAAACAAAG+AGG 0.668525 7_1:+80460785 Msa1042520:five_prime_UTR
CACACAAAAGAGGAGTTTCG+GGG 0.674580 7_1:-80459994 None:intergenic
ACACAAAAGAGGAGTTTCGG+GGG 0.684145 7_1:-80459993 None:intergenic
TTTGTTTAGTTCTGTCACCG+AGG 0.698145 7_1:-80460781 None:intergenic
GTGGTTGAGGGCAATGACAG+TGG 0.706158 7_1:-80462486 None:intergenic
ACTTACCATCAGCAGCACAA+GGG 0.715502 7_1:-80460811 None:intergenic
GTTGAGGGCAATGACAGTGG+TGG 0.726469 7_1:-80462483 None:intergenic
TGTTGATCAGACAAACACCT+CGG 0.734036 7_1:+80462416 Msa1042520:CDS
ATGAGCAGCAGAAACTACCG+CGG 0.757246 7_1:-80462586 None:intergenic
GATGTCAGCATTAAGCACCG+AGG 0.759983 7_1:-80462433 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATAAAATAAAT+TGG - chr7_1:80462145-80462164 None:intergenic 0.0%
!! TATATATATATAAAATAAAT+TGG - chr7_1:80462145-80462164 None:intergenic 0.0%
!!! TTTTCTTATATTTATTCTTT+TGG + chr7_1:80460465-80460484 Msa1042520:intron 10.0%
!!! TTTTCTTATATTTATTCTTT+TGG + chr7_1:80460465-80460484 Msa1042520:intron 10.0%
!! TATATATAAAATAAATTGGC+AGG - chr7_1:80462141-80462160 None:intergenic 15.0%
!! ACAAAAAAAAACAAAAAAAG+AGG + chr7_1:80462770-80462789 Msa1042520:three_prime_UTR 15.0%
!! CAAAAAAAAACAAAAAAAGA+GGG + chr7_1:80462771-80462790 Msa1042520:three_prime_UTR 15.0%
!! AAAAAAAAACAAAAAAAGAG+GGG + chr7_1:80462772-80462791 Msa1042520:three_prime_UTR 15.0%
!! TATATATAAAATAAATTGGC+AGG - chr7_1:80462141-80462160 None:intergenic 15.0%
!! ACAAAAAAAAACAAAAAAAG+AGG + chr7_1:80462770-80462789 Msa1042520:three_prime_UTR 15.0%
!! CAAAAAAAAACAAAAAAAGA+GGG + chr7_1:80462771-80462790 Msa1042520:three_prime_UTR 15.0%
!! AAAAAAAAACAAAAAAAGAG+GGG + chr7_1:80462772-80462791 Msa1042520:three_prime_UTR 15.0%
!!! ATTTTCGAACTTTTGTTATA+TGG + chr7_1:80460537-80460556 Msa1042520:intron 20.0%
!! TAATCTGATGAAATGATATT+AGG + chr7_1:80460663-80460682 Msa1042520:intron 20.0%
!!! ATTTTCGAACTTTTGTTATA+TGG + chr7_1:80460537-80460556 Msa1042520:intron 20.0%
!! TAATCTGATGAAATGATATT+AGG + chr7_1:80460663-80460682 Msa1042520:intron 20.0%
! TGAAATTGAAATGATTGAAG+TGG - chr7_1:80460053-80460072 None:intergenic 25.0%
!!! TCAATTTCATTTCACTTTTC+TGG + chr7_1:80460064-80460083 Msa1042520:intron 25.0%
!!! CAATTTCATTTCACTTTTCT+GGG + chr7_1:80460065-80460084 Msa1042520:intron 25.0%
!!! GTTTCGTGATTTGTTTTATA+GGG + chr7_1:80460487-80460506 Msa1042520:intron 25.0%
!! ATACTAAAATCTGAAGTACA+AGG - chr7_1:80460609-80460628 None:intergenic 25.0%
!!! TTGTACTTCAGATTTTAGTA+TGG + chr7_1:80460608-80460627 Msa1042520:intron 25.0%
! GATTATCATTCAACAATCAT+GGG - chr7_1:80460648-80460667 None:intergenic 25.0%
! AGATTATCATTCAACAATCA+TGG - chr7_1:80460649-80460668 None:intergenic 25.0%
! TGATTCGTTATATCTTGTAA+CGG + chr7_1:80460849-80460868 Msa1042520:intron 25.0%
! TTCTATTTAAACACACCTTT+AGG - chr7_1:80461542-80461561 None:intergenic 25.0%
!! CTACATTAGTATTTTTCTGT+TGG + chr7_1:80461562-80461581 Msa1042520:intron 25.0%
! CTTTCAATTCGGAAAAATAA+AGG - chr7_1:80461665-80461684 None:intergenic 25.0%
! TATACTCGATTCTTTCAATT+CGG - chr7_1:80461676-80461695 None:intergenic 25.0%
! CCTATAACATTAAATTTGAC+AGG - chr7_1:80461763-80461782 None:intergenic 25.0%
! CCTGTCAAATTTAATGTTAT+AGG + chr7_1:80461760-80461779 Msa1042520:intron 25.0%
! AATATTTGGATGGAAAATCT+TGG - chr7_1:80461797-80461816 None:intergenic 25.0%
!! TGACTTTTTGAATTAAGTTC+TGG + chr7_1:80461939-80461958 Msa1042520:intron 25.0%
! TATATATATATGTCGATCTG+TGG + chr7_1:80462213-80462232 Msa1042520:intron 25.0%
! AAAACTAAGGCACAAATAAA+AGG - chr7_1:80462723-80462742 None:intergenic 25.0%
! TCTATCAAATTGCAAAACTA+AGG - chr7_1:80462736-80462755 None:intergenic 25.0%
! TTGCAATTTGATAGAAAGAA+AGG + chr7_1:80462741-80462760 Msa1042520:three_prime_UTR 25.0%
! AAGTGTTTGAGTAAAATTAG+AGG - chr7_1:80462958-80462977 None:intergenic 25.0%
! TGAAATTGAAATGATTGAAG+TGG - chr7_1:80460053-80460072 None:intergenic 25.0%
!!! TCAATTTCATTTCACTTTTC+TGG + chr7_1:80460064-80460083 Msa1042520:intron 25.0%
!!! CAATTTCATTTCACTTTTCT+GGG + chr7_1:80460065-80460084 Msa1042520:intron 25.0%
!!! GTTTCGTGATTTGTTTTATA+GGG + chr7_1:80460487-80460506 Msa1042520:intron 25.0%
!! ATACTAAAATCTGAAGTACA+AGG - chr7_1:80460609-80460628 None:intergenic 25.0%
!!! TTGTACTTCAGATTTTAGTA+TGG + chr7_1:80460608-80460627 Msa1042520:intron 25.0%
! GATTATCATTCAACAATCAT+GGG - chr7_1:80460648-80460667 None:intergenic 25.0%
! AGATTATCATTCAACAATCA+TGG - chr7_1:80460649-80460668 None:intergenic 25.0%
! TGATTCGTTATATCTTGTAA+CGG + chr7_1:80460849-80460868 Msa1042520:intron 25.0%
! TTCTATTTAAACACACCTTT+AGG - chr7_1:80461542-80461561 None:intergenic 25.0%
!! CTACATTAGTATTTTTCTGT+TGG + chr7_1:80461562-80461581 Msa1042520:intron 25.0%
! CTTTCAATTCGGAAAAATAA+AGG - chr7_1:80461665-80461684 None:intergenic 25.0%
! TATACTCGATTCTTTCAATT+CGG - chr7_1:80461676-80461695 None:intergenic 25.0%
! CCTATAACATTAAATTTGAC+AGG - chr7_1:80461763-80461782 None:intergenic 25.0%
! CCTGTCAAATTTAATGTTAT+AGG + chr7_1:80461760-80461779 Msa1042520:intron 25.0%
! AATATTTGGATGGAAAATCT+TGG - chr7_1:80461797-80461816 None:intergenic 25.0%
!! TGACTTTTTGAATTAAGTTC+TGG + chr7_1:80461939-80461958 Msa1042520:intron 25.0%
! TATATATATATGTCGATCTG+TGG + chr7_1:80462213-80462232 Msa1042520:intron 25.0%
! AAAACTAAGGCACAAATAAA+AGG - chr7_1:80462723-80462742 None:intergenic 25.0%
! TCTATCAAATTGCAAAACTA+AGG - chr7_1:80462736-80462755 None:intergenic 25.0%
! TTGCAATTTGATAGAAAGAA+AGG + chr7_1:80462741-80462760 Msa1042520:three_prime_UTR 25.0%
! AAGTGTTTGAGTAAAATTAG+AGG - chr7_1:80462958-80462977 None:intergenic 25.0%
GAAAAAAAAAAGATCCAGCT+TGG - chr7_1:80460127-80460146 None:intergenic 30.0%
TACACGTAAACAGAAATCAA+GGG - chr7_1:80460186-80460205 None:intergenic 30.0%
ATACACGTAAACAGAAATCA+AGG - chr7_1:80460187-80460206 None:intergenic 30.0%
! ATGATACTTTTCCAATCTGA+TGG + chr7_1:80460219-80460238 Msa1042520:intron 30.0%
! TGATACTTTTCCAATCTGAT+GGG + chr7_1:80460220-80460239 Msa1042520:intron 30.0%
AAGAAAATTACCCATCAGAT+TGG - chr7_1:80460233-80460252 None:intergenic 30.0%
!!! TTTTTTGAGTTTCGATCAAG+GGG - chr7_1:80460323-80460342 None:intergenic 30.0%
!!! CTTTTTTGAGTTTCGATCAA+GGG - chr7_1:80460324-80460343 None:intergenic 30.0%
!!! TCTTTTTTGAGTTTCGATCA+AGG - chr7_1:80460325-80460344 None:intergenic 30.0%
!!! GGTTTCGTGATTTGTTTTAT+AGG + chr7_1:80460486-80460505 Msa1042520:intron 30.0%
TTAGGTGTACTAATTTCTTG+TGG + chr7_1:80460681-80460700 Msa1042520:intron 30.0%
TTGTGAACTCTGAATTAGTT+CGG + chr7_1:80460746-80460765 Msa1042520:five_prime_UTR 30.0%
AAACCTGTTGCACATTAAAT+TGG - chr7_1:80460890-80460909 None:intergenic 30.0%
!! GTGGTTGTTTTATTCCATTT+TGG + chr7_1:80460915-80460934 Msa1042520:intron 30.0%
!! GTGGTTGTTTTATTCCATTT+TGG + chr7_1:80460915-80460934 Msa1042520:intron 30.0%
TGTAGTTGTTCTATTCCATT+TGG + chr7_1:80460978-80460997 Msa1042520:intron 30.0%
GTAGTTGTTCTATTCCATTT+GGG + chr7_1:80460979-80460998 Msa1042520:intron 30.0%
TGTAGTTGTTCTATTCCATT+TGG + chr7_1:80460978-80460997 Msa1042520:intron 30.0%
GTAGTTGTTCTATTCCATTT+GGG + chr7_1:80460979-80460998 Msa1042520:intron 30.0%
ATTACACGACAAATCCAAAA+TGG - chr7_1:80461121-80461140 None:intergenic 30.0%
! GTAATTGTTCGATTCCATTT+TGG + chr7_1:80461136-80461155 Msa1042520:intron 30.0%
!!! ATTCCATTTTGGTTCAGTAA+CGG + chr7_1:80461179-80461198 Msa1042520:intron 30.0%
!!! TTGTATGGTGCTTTTGTTTT+AGG + chr7_1:80461217-80461236 Msa1042520:intron 30.0%
!! ATCAAGATTTTTCAACTCCT+TGG - chr7_1:80461285-80461304 None:intergenic 30.0%
! ACAATTTTTGCTGACATTGA+AGG + chr7_1:80461356-80461375 Msa1042520:CDS 30.0%
TATTTAAACACACCTTTAGG+AGG - chr7_1:80461539-80461558 None:intergenic 30.0%
! AGGAATCAATCAATGTTTTC+AGG - chr7_1:80461645-80461664 None:intergenic 30.0%
CATATTCTTATCGTAAGTCT+TGG + chr7_1:80461883-80461902 Msa1042520:intron 30.0%
! TGAATTAAGTTCTGGTTGAT+TGG + chr7_1:80461947-80461966 Msa1042520:intron 30.0%
! TTTAAAGCTGATTCTGGAAA+CGG - chr7_1:80462037-80462056 None:intergenic 30.0%
! AGTTCATTTAAAGCTGATTC+TGG - chr7_1:80462043-80462062 None:intergenic 30.0%
!! AGAATCAGCTTTAAATGAAC+TGG + chr7_1:80462042-80462061 Msa1042520:CDS 30.0%
ACTACTGCTTGAAAATTATG+AGG + chr7_1:80462072-80462091 Msa1042520:CDS 30.0%
!! ATAGCTCCACTTTTGAATTT+CGG - chr7_1:80462372-80462391 None:intergenic 30.0%
AAAAAACAAAAAAAGAGGGG+AGG + chr7_1:80462775-80462794 Msa1042520:three_prime_UTR 30.0%
AAAAACAAAAAAAGAGGGGA+GGG + chr7_1:80462776-80462795 Msa1042520:three_prime_UTR 30.0%
TTGTGTACTATTGATCTTTC+TGG + chr7_1:80462834-80462853 Msa1042520:three_prime_UTR 30.0%
TGTGTACTATTGATCTTTCT+GGG + chr7_1:80462835-80462854 Msa1042520:three_prime_UTR 30.0%
ATCAACAGTAAATGACAGTA+AGG - chr7_1:80462928-80462947 None:intergenic 30.0%
! GTCATTTACTGTTGATTACT+TGG + chr7_1:80462932-80462951 Msa1042520:three_prime_UTR 30.0%
GAAAAAAAAAAGATCCAGCT+TGG - chr7_1:80460127-80460146 None:intergenic 30.0%
TACACGTAAACAGAAATCAA+GGG - chr7_1:80460186-80460205 None:intergenic 30.0%
ATACACGTAAACAGAAATCA+AGG - chr7_1:80460187-80460206 None:intergenic 30.0%
! ATGATACTTTTCCAATCTGA+TGG + chr7_1:80460219-80460238 Msa1042520:intron 30.0%
! TGATACTTTTCCAATCTGAT+GGG + chr7_1:80460220-80460239 Msa1042520:intron 30.0%
AAGAAAATTACCCATCAGAT+TGG - chr7_1:80460233-80460252 None:intergenic 30.0%
!!! TTTTTTGAGTTTCGATCAAG+GGG - chr7_1:80460323-80460342 None:intergenic 30.0%
!!! CTTTTTTGAGTTTCGATCAA+GGG - chr7_1:80460324-80460343 None:intergenic 30.0%
!!! TCTTTTTTGAGTTTCGATCA+AGG - chr7_1:80460325-80460344 None:intergenic 30.0%
!!! GGTTTCGTGATTTGTTTTAT+AGG + chr7_1:80460486-80460505 Msa1042520:intron 30.0%
TTAGGTGTACTAATTTCTTG+TGG + chr7_1:80460681-80460700 Msa1042520:intron 30.0%
TTGTGAACTCTGAATTAGTT+CGG + chr7_1:80460746-80460765 Msa1042520:five_prime_UTR 30.0%
AAACCTGTTGCACATTAAAT+TGG - chr7_1:80460890-80460909 None:intergenic 30.0%
!! GTGGTTGTTTTATTCCATTT+TGG + chr7_1:80460915-80460934 Msa1042520:intron 30.0%
!! GTGGTTGTTTTATTCCATTT+TGG + chr7_1:80460915-80460934 Msa1042520:intron 30.0%
TGTAGTTGTTCTATTCCATT+TGG + chr7_1:80460978-80460997 Msa1042520:intron 30.0%
GTAGTTGTTCTATTCCATTT+GGG + chr7_1:80460979-80460998 Msa1042520:intron 30.0%
TGTAGTTGTTCTATTCCATT+TGG + chr7_1:80460978-80460997 Msa1042520:intron 30.0%
GTAGTTGTTCTATTCCATTT+GGG + chr7_1:80460979-80460998 Msa1042520:intron 30.0%
ATTACACGACAAATCCAAAA+TGG - chr7_1:80461121-80461140 None:intergenic 30.0%
! GTAATTGTTCGATTCCATTT+TGG + chr7_1:80461136-80461155 Msa1042520:intron 30.0%
!!! ATTCCATTTTGGTTCAGTAA+CGG + chr7_1:80461179-80461198 Msa1042520:intron 30.0%
!!! TTGTATGGTGCTTTTGTTTT+AGG + chr7_1:80461217-80461236 Msa1042520:intron 30.0%
!! ATCAAGATTTTTCAACTCCT+TGG - chr7_1:80461285-80461304 None:intergenic 30.0%
! ACAATTTTTGCTGACATTGA+AGG + chr7_1:80461356-80461375 Msa1042520:CDS 30.0%
TATTTAAACACACCTTTAGG+AGG - chr7_1:80461539-80461558 None:intergenic 30.0%
! AGGAATCAATCAATGTTTTC+AGG - chr7_1:80461645-80461664 None:intergenic 30.0%
CATATTCTTATCGTAAGTCT+TGG + chr7_1:80461883-80461902 Msa1042520:intron 30.0%
! TGAATTAAGTTCTGGTTGAT+TGG + chr7_1:80461947-80461966 Msa1042520:intron 30.0%
! TTTAAAGCTGATTCTGGAAA+CGG - chr7_1:80462037-80462056 None:intergenic 30.0%
! AGTTCATTTAAAGCTGATTC+TGG - chr7_1:80462043-80462062 None:intergenic 30.0%
!! AGAATCAGCTTTAAATGAAC+TGG + chr7_1:80462042-80462061 Msa1042520:CDS 30.0%
ACTACTGCTTGAAAATTATG+AGG + chr7_1:80462072-80462091 Msa1042520:CDS 30.0%
!! ATAGCTCCACTTTTGAATTT+CGG - chr7_1:80462372-80462391 None:intergenic 30.0%
AAAAAACAAAAAAAGAGGGG+AGG + chr7_1:80462775-80462794 Msa1042520:three_prime_UTR 30.0%
AAAAACAAAAAAAGAGGGGA+GGG + chr7_1:80462776-80462795 Msa1042520:three_prime_UTR 30.0%
TTGTGTACTATTGATCTTTC+TGG + chr7_1:80462834-80462853 Msa1042520:three_prime_UTR 30.0%
TGTGTACTATTGATCTTTCT+GGG + chr7_1:80462835-80462854 Msa1042520:three_prime_UTR 30.0%
ATCAACAGTAAATGACAGTA+AGG - chr7_1:80462928-80462947 None:intergenic 30.0%
! GTCATTTACTGTTGATTACT+TGG + chr7_1:80462932-80462951 Msa1042520:three_prime_UTR 30.0%
! TCCTCTTTTGTGTGTGAAAA+AGG + chr7_1:80460003-80460022 Msa1042520:five_prime_UTR 35.0%
!! ACCTTTTTCACACACAAAAG+AGG - chr7_1:80460007-80460026 None:intergenic 35.0%
AGGTGAATCATCTTCATCTA+AGG + chr7_1:80460023-80460042 Msa1042520:intron 35.0%
TTTCTTCAATTACACCAAGC+TGG + chr7_1:80460110-80460129 Msa1042520:intron 35.0%
!! TCTGATGGGTAATTTTCTTG+TGG + chr7_1:80460234-80460253 Msa1042520:intron 35.0%
!! CTGATGGGTAATTTTCTTGT+GGG + chr7_1:80460235-80460254 Msa1042520:intron 35.0%
!! TGATGGGTAATTTTCTTGTG+GGG + chr7_1:80460236-80460255 Msa1042520:intron 35.0%
!!! TCACATGTTTTTTCCCCATT+AGG + chr7_1:80460290-80460309 Msa1042520:intron 35.0%
!!! CACATGTTTTTTCCCCATTA+GGG + chr7_1:80460291-80460310 Msa1042520:intron 35.0%
ATGCTATTGTGTGTACATGA+AGG + chr7_1:80460390-80460409 Msa1042520:intron 35.0%
TGCTATTGTGTGTACATGAA+GGG + chr7_1:80460391-80460410 Msa1042520:intron 35.0%
GTGACAGAACTAAACAAAGA+GGG + chr7_1:80460786-80460805 Msa1042520:five_prime_UTR 35.0%
CAAGATATAACGAATCAAGC+AGG - chr7_1:80460846-80460865 None:intergenic 35.0%
TTGCCAATTTAATGTGCAAC+AGG + chr7_1:80460884-80460903 Msa1042520:intron 35.0%
ACTACACGACAAATCCAAAA+TGG - chr7_1:80460964-80460983 None:intergenic 35.0%
ACTACACGACAAATCGAAAA+TGG - chr7_1:80461058-80461077 None:intergenic 35.0%
! GTAGTTGTTCGATTCCATTT+TGG + chr7_1:80461104-80461123 Msa1042520:intron 35.0%
AAAAAGGAAGTTGCTTACCA+GGG - chr7_1:80461382-80461401 None:intergenic 35.0%
TAAAAAGGAAGTTGCTTACC+AGG - chr7_1:80461383-80461402 None:intergenic 35.0%
! TGTGGAAGGGTACATTAAAA+AGG - chr7_1:80461398-80461417 None:intergenic 35.0%
!! CATTGATTCCCATAATCAAC+AGG + chr7_1:80461988-80462007 Msa1042520:intron 35.0%
! CCTAACAACCTGTTGATTAT+GGG - chr7_1:80461999-80462018 None:intergenic 35.0%
! ACCTAACAACCTGTTGATTA+TGG - chr7_1:80462000-80462019 None:intergenic 35.0%
GTCTTACGTAAAAACTAGCA+TGG - chr7_1:80462270-80462289 None:intergenic 35.0%
! GTTTTTACGTAAGACATTCC+CGG + chr7_1:80462275-80462294 Msa1042520:intron 35.0%
!! CTTTGATTTTGCATGGATTC+CGG - chr7_1:80462349-80462368 None:intergenic 35.0%
!! ATTTCGGCTTTGATTTTGCA+TGG - chr7_1:80462356-80462375 None:intergenic 35.0%
TCAAAGCCGAAATTCAAAAG+TGG + chr7_1:80462363-80462382 Msa1042520:CDS 35.0%
ATTCAGAGCAGTAGTTGATT+CGG - chr7_1:80462397-80462416 None:intergenic 35.0%
AAAACAAAAAAAGAGGGGAG+GGG + chr7_1:80462777-80462796 Msa1042520:three_prime_UTR 35.0%
! TCCTCTTTTGTGTGTGAAAA+AGG + chr7_1:80460003-80460022 Msa1042520:five_prime_UTR 35.0%
!! ACCTTTTTCACACACAAAAG+AGG - chr7_1:80460007-80460026 None:intergenic 35.0%
AGGTGAATCATCTTCATCTA+AGG + chr7_1:80460023-80460042 Msa1042520:intron 35.0%
TTTCTTCAATTACACCAAGC+TGG + chr7_1:80460110-80460129 Msa1042520:intron 35.0%
!! TCTGATGGGTAATTTTCTTG+TGG + chr7_1:80460234-80460253 Msa1042520:intron 35.0%
!! CTGATGGGTAATTTTCTTGT+GGG + chr7_1:80460235-80460254 Msa1042520:intron 35.0%
!! TGATGGGTAATTTTCTTGTG+GGG + chr7_1:80460236-80460255 Msa1042520:intron 35.0%
!!! TCACATGTTTTTTCCCCATT+AGG + chr7_1:80460290-80460309 Msa1042520:intron 35.0%
!!! CACATGTTTTTTCCCCATTA+GGG + chr7_1:80460291-80460310 Msa1042520:intron 35.0%
ATGCTATTGTGTGTACATGA+AGG + chr7_1:80460390-80460409 Msa1042520:intron 35.0%
TGCTATTGTGTGTACATGAA+GGG + chr7_1:80460391-80460410 Msa1042520:intron 35.0%
GTGACAGAACTAAACAAAGA+GGG + chr7_1:80460786-80460805 Msa1042520:five_prime_UTR 35.0%
CAAGATATAACGAATCAAGC+AGG - chr7_1:80460846-80460865 None:intergenic 35.0%
TTGCCAATTTAATGTGCAAC+AGG + chr7_1:80460884-80460903 Msa1042520:intron 35.0%
ACTACACGACAAATCCAAAA+TGG - chr7_1:80460964-80460983 None:intergenic 35.0%
ACTACACGACAAATCGAAAA+TGG - chr7_1:80461058-80461077 None:intergenic 35.0%
! GTAGTTGTTCGATTCCATTT+TGG + chr7_1:80461104-80461123 Msa1042520:intron 35.0%
AAAAAGGAAGTTGCTTACCA+GGG - chr7_1:80461382-80461401 None:intergenic 35.0%
TAAAAAGGAAGTTGCTTACC+AGG - chr7_1:80461383-80461402 None:intergenic 35.0%
! TGTGGAAGGGTACATTAAAA+AGG - chr7_1:80461398-80461417 None:intergenic 35.0%
!! CATTGATTCCCATAATCAAC+AGG + chr7_1:80461988-80462007 Msa1042520:intron 35.0%
! CCTAACAACCTGTTGATTAT+GGG - chr7_1:80461999-80462018 None:intergenic 35.0%
! ACCTAACAACCTGTTGATTA+TGG - chr7_1:80462000-80462019 None:intergenic 35.0%
GTCTTACGTAAAAACTAGCA+TGG - chr7_1:80462270-80462289 None:intergenic 35.0%
! GTTTTTACGTAAGACATTCC+CGG + chr7_1:80462275-80462294 Msa1042520:intron 35.0%
!! CTTTGATTTTGCATGGATTC+CGG - chr7_1:80462349-80462368 None:intergenic 35.0%
!! ATTTCGGCTTTGATTTTGCA+TGG - chr7_1:80462356-80462375 None:intergenic 35.0%
TCAAAGCCGAAATTCAAAAG+TGG + chr7_1:80462363-80462382 Msa1042520:CDS 35.0%
ATTCAGAGCAGTAGTTGATT+CGG - chr7_1:80462397-80462416 None:intergenic 35.0%
AAAACAAAAAAAGAGGGGAG+GGG + chr7_1:80462777-80462796 Msa1042520:three_prime_UTR 35.0%
ACACACAAAAGAGGAGTTTC+GGG - chr7_1:80459998-80460017 None:intergenic 40.0%
CACACACAAAAGAGGAGTTT+CGG - chr7_1:80459999-80460018 None:intergenic 40.0%
!! AGGGTGCTTTTGATGCAAAT+TGG + chr7_1:80460506-80460525 Msa1042520:intron 40.0%
! GGGTGCTTTTGATGCAAATT+GGG + chr7_1:80460507-80460526 Msa1042520:intron 40.0%
! TTGTTGAAGTGTCTGCAAAC+TGG + chr7_1:80460560-80460579 Msa1042520:intron 40.0%
GGTGTACTAATTTCTTGTGG+AGG + chr7_1:80460684-80460703 Msa1042520:intron 40.0%
!! TTTGTTTAGTTCTGTCACCG+AGG - chr7_1:80460784-80460803 None:intergenic 40.0%
GGTGACAGAACTAAACAAAG+AGG + chr7_1:80460785-80460804 Msa1042520:five_prime_UTR 40.0%
! TCCATTTTGGATTTGTCGTG+TGG + chr7_1:80460928-80460947 Msa1042520:intron 40.0%
ACCACACGACAAATCCAAAA+TGG - chr7_1:80460932-80460951 None:intergenic 40.0%
TGTGGTTGTTCGATTCCATT+TGG + chr7_1:80461009-80461028 Msa1042520:intron 40.0%
GTGGTTGTTCGATTCCATTT+GGG + chr7_1:80461010-80461029 Msa1042520:intron 40.0%
ACGACACGACAAATCCAAAA+TGG - chr7_1:80461153-80461172 None:intergenic 40.0%
! GTCGTTGTTCGATTCCATTT+TGG + chr7_1:80461168-80461187 Msa1042520:intron 40.0%
AGCATTCTGACATGGTTGTA+TGG + chr7_1:80461202-80461221 Msa1042520:intron 40.0%
! ATTAGGCGGAAGATTTTCGT+TGG - chr7_1:80461246-80461265 None:intergenic 40.0%
ATCTTCCGCCTAATGTGATA+AGG + chr7_1:80461252-80461271 Msa1042520:CDS 40.0%
AGTTGCCTTATCACATTAGG+CGG - chr7_1:80461260-80461279 None:intergenic 40.0%
GCAAGTTGCCTTATCACATT+AGG - chr7_1:80461263-80461282 None:intergenic 40.0%
GCTCGTTACATAATGTGGAA+GGG - chr7_1:80461411-80461430 None:intergenic 40.0%
AGCTCGTTACATAATGTGGA+AGG - chr7_1:80461412-80461431 None:intergenic 40.0%
CTTGAGCTCGTTACATAATG+TGG - chr7_1:80461416-80461435 None:intergenic 40.0%
GCGATAGTTTCAACTTCATG+CGG - chr7_1:80461499-80461518 None:intergenic 40.0%
CACTGTTGGCAATATTTGGA+TGG - chr7_1:80461807-80461826 None:intergenic 40.0%
CATCCAAATATTGCCAACAG+TGG + chr7_1:80461805-80461824 Msa1042520:CDS 40.0%
TCTCCACTGTTGGCAATATT+TGG - chr7_1:80461811-80461830 None:intergenic 40.0%
TAAGAATATGCCGTAACCCA+AGG - chr7_1:80461873-80461892 None:intergenic 40.0%
CCCATAATCAACAGGTTGTT+AGG + chr7_1:80461996-80462015 Msa1042520:intron 40.0%
!! TCAGCTTTAAATGAACTGGC+TGG + chr7_1:80462046-80462065 Msa1042520:CDS 40.0%
TGTTGATCAGACAAACACCT+CGG + chr7_1:80462416-80462435 Msa1042520:CDS 40.0%
AGAAACATTAGCAGACGACT+CGG - chr7_1:80462559-80462578 None:intergenic 40.0%
AAACAAAAAAAGAGGGGAGG+GGG + chr7_1:80462778-80462797 Msa1042520:three_prime_UTR 40.0%
ACACACAAAAGAGGAGTTTC+GGG - chr7_1:80459998-80460017 None:intergenic 40.0%
CACACACAAAAGAGGAGTTT+CGG - chr7_1:80459999-80460018 None:intergenic 40.0%
!! AGGGTGCTTTTGATGCAAAT+TGG + chr7_1:80460506-80460525 Msa1042520:intron 40.0%
! GGGTGCTTTTGATGCAAATT+GGG + chr7_1:80460507-80460526 Msa1042520:intron 40.0%
! TTGTTGAAGTGTCTGCAAAC+TGG + chr7_1:80460560-80460579 Msa1042520:intron 40.0%
GGTGTACTAATTTCTTGTGG+AGG + chr7_1:80460684-80460703 Msa1042520:intron 40.0%
!! TTTGTTTAGTTCTGTCACCG+AGG - chr7_1:80460784-80460803 None:intergenic 40.0%
GGTGACAGAACTAAACAAAG+AGG + chr7_1:80460785-80460804 Msa1042520:five_prime_UTR 40.0%
! TCCATTTTGGATTTGTCGTG+TGG + chr7_1:80460928-80460947 Msa1042520:intron 40.0%
ACCACACGACAAATCCAAAA+TGG - chr7_1:80460932-80460951 None:intergenic 40.0%
TGTGGTTGTTCGATTCCATT+TGG + chr7_1:80461009-80461028 Msa1042520:intron 40.0%
GTGGTTGTTCGATTCCATTT+GGG + chr7_1:80461010-80461029 Msa1042520:intron 40.0%
ACGACACGACAAATCCAAAA+TGG - chr7_1:80461153-80461172 None:intergenic 40.0%
! GTCGTTGTTCGATTCCATTT+TGG + chr7_1:80461168-80461187 Msa1042520:intron 40.0%
AGCATTCTGACATGGTTGTA+TGG + chr7_1:80461202-80461221 Msa1042520:intron 40.0%
! ATTAGGCGGAAGATTTTCGT+TGG - chr7_1:80461246-80461265 None:intergenic 40.0%
ATCTTCCGCCTAATGTGATA+AGG + chr7_1:80461252-80461271 Msa1042520:CDS 40.0%
AGTTGCCTTATCACATTAGG+CGG - chr7_1:80461260-80461279 None:intergenic 40.0%
GCAAGTTGCCTTATCACATT+AGG - chr7_1:80461263-80461282 None:intergenic 40.0%
GCTCGTTACATAATGTGGAA+GGG - chr7_1:80461411-80461430 None:intergenic 40.0%
AGCTCGTTACATAATGTGGA+AGG - chr7_1:80461412-80461431 None:intergenic 40.0%
CTTGAGCTCGTTACATAATG+TGG - chr7_1:80461416-80461435 None:intergenic 40.0%
GCGATAGTTTCAACTTCATG+CGG - chr7_1:80461499-80461518 None:intergenic 40.0%
CACTGTTGGCAATATTTGGA+TGG - chr7_1:80461807-80461826 None:intergenic 40.0%
CATCCAAATATTGCCAACAG+TGG + chr7_1:80461805-80461824 Msa1042520:CDS 40.0%
TCTCCACTGTTGGCAATATT+TGG - chr7_1:80461811-80461830 None:intergenic 40.0%
TAAGAATATGCCGTAACCCA+AGG - chr7_1:80461873-80461892 None:intergenic 40.0%
CCCATAATCAACAGGTTGTT+AGG + chr7_1:80461996-80462015 Msa1042520:intron 40.0%
!! TCAGCTTTAAATGAACTGGC+TGG + chr7_1:80462046-80462065 Msa1042520:CDS 40.0%
TGTTGATCAGACAAACACCT+CGG + chr7_1:80462416-80462435 Msa1042520:CDS 40.0%
AGAAACATTAGCAGACGACT+CGG - chr7_1:80462559-80462578 None:intergenic 40.0%
AAACAAAAAAAGAGGGGAGG+GGG + chr7_1:80462778-80462797 Msa1042520:three_prime_UTR 40.0%
ACACAAAAGAGGAGTTTCGG+GGG - chr7_1:80459996-80460015 None:intergenic 45.0%
CACACAAAAGAGGAGTTTCG+GGG - chr7_1:80459997-80460016 None:intergenic 45.0%
AAGGGGACAAAACCCTAATG+GGG - chr7_1:80460306-80460325 None:intergenic 45.0%
CAAGGGGACAAAACCCTAAT+GGG - chr7_1:80460307-80460326 None:intergenic 45.0%
TCAAGGGGACAAAACCCTAA+TGG - chr7_1:80460308-80460327 None:intergenic 45.0%
ACTTACCATCAGCAGCACAA+GGG - chr7_1:80460814-80460833 None:intergenic 45.0%
TACTTACCATCAGCAGCACA+AGG - chr7_1:80460815-80460834 None:intergenic 45.0%
AACTGCACGACAAACCCAAA+TGG - chr7_1:80461027-80461046 None:intergenic 45.0%
AACTACACGACAAGCCCAAA+TGG - chr7_1:80461090-80461109 None:intergenic 45.0%
GCTCCGTTACTGAACCAAAA+TGG - chr7_1:80461185-80461204 None:intergenic 45.0%
! AGTAACGGAGCATTCTGACA+TGG + chr7_1:80461194-80461213 Msa1042520:intron 45.0%
TGTGATAAGGCAACTTGCCA+AGG + chr7_1:80461265-80461284 Msa1042520:CDS 45.0%
AACTTTAATGCCCTCAGGAG+GGG - chr7_1:80461312-80461331 None:intergenic 45.0%
CAACTTTAATGCCCTCAGGA+GGG - chr7_1:80461313-80461332 None:intergenic 45.0%
ACAACTTTAATGCCCTCAGG+AGG - chr7_1:80461314-80461333 None:intergenic 45.0%
ACGACAACTTTAATGCCCTC+AGG - chr7_1:80461317-80461336 None:intergenic 45.0%
CGGAAAACTCCACTCTCATA+AGG - chr7_1:80461479-80461498 None:intergenic 45.0%
TTTCCACACTCTCCTCCTAA+AGG + chr7_1:80461524-80461543 Msa1042520:CDS 45.0%
GACACAAATCTCTCCACTGT+TGG - chr7_1:80461821-80461840 None:intergenic 45.0%
TTGTGTCAACGCGCTCAAAA+AGG + chr7_1:80461834-80461853 Msa1042520:CDS 45.0%
TCAACGCGCTCAAAAAGGAT+TGG + chr7_1:80461839-80461858 Msa1042520:CDS 45.0%
AAGGATTGGAATCCTAGCCT+TGG + chr7_1:80461853-80461872 Msa1042520:CDS 45.0%
! AGGATTGGAATCCTAGCCTT+GGG + chr7_1:80461854-80461873 Msa1042520:CDS 45.0%
TGCCAGGTGAGTTAAGCAAA+TGG + chr7_1:80462108-80462127 Msa1042520:intron 45.0%
CACCATTTGCTTAACTCACC+TGG - chr7_1:80462113-80462132 None:intergenic 45.0%
CTCAATTACAAGCAGATGCC+GGG - chr7_1:80462296-80462315 None:intergenic 45.0%
CCTCAATTACAAGCAGATGC+CGG - chr7_1:80462297-80462316 None:intergenic 45.0%
CGGCATCTGCTTGTAATTGA+GGG + chr7_1:80462295-80462314 Msa1042520:intron 45.0%
GGCATCTGCTTGTAATTGAG+GGG + chr7_1:80462296-80462315 Msa1042520:intron 45.0%
AAGAGGAACTAGTCAGGATC+AGG + chr7_1:80462515-80462534 Msa1042520:CDS 45.0%
TAATGTTTCTTCTGCTGCCG+CGG + chr7_1:80462569-80462588 Msa1042520:CDS 45.0%
TGCTCATGCACCACAAAAGA+GGG + chr7_1:80462602-80462621 Msa1042520:CDS 45.0%
! GTTCCAATGTCCCTCTTTTG+TGG - chr7_1:80462615-80462634 None:intergenic 45.0%
CATTGGAACTGCTAAAGCTC+AGG + chr7_1:80462626-80462645 Msa1042520:CDS 45.0%
AACAAAAAAAGAGGGGAGGG+GGG + chr7_1:80462779-80462798 Msa1042520:three_prime_UTR 45.0%
ACACAAAAGAGGAGTTTCGG+GGG - chr7_1:80459996-80460015 None:intergenic 45.0%
CACACAAAAGAGGAGTTTCG+GGG - chr7_1:80459997-80460016 None:intergenic 45.0%
AAGGGGACAAAACCCTAATG+GGG - chr7_1:80460306-80460325 None:intergenic 45.0%
CAAGGGGACAAAACCCTAAT+GGG - chr7_1:80460307-80460326 None:intergenic 45.0%
TCAAGGGGACAAAACCCTAA+TGG - chr7_1:80460308-80460327 None:intergenic 45.0%
ACTTACCATCAGCAGCACAA+GGG - chr7_1:80460814-80460833 None:intergenic 45.0%
TACTTACCATCAGCAGCACA+AGG - chr7_1:80460815-80460834 None:intergenic 45.0%
AACTGCACGACAAACCCAAA+TGG - chr7_1:80461027-80461046 None:intergenic 45.0%
AACTACACGACAAGCCCAAA+TGG - chr7_1:80461090-80461109 None:intergenic 45.0%
GCTCCGTTACTGAACCAAAA+TGG - chr7_1:80461185-80461204 None:intergenic 45.0%
! AGTAACGGAGCATTCTGACA+TGG + chr7_1:80461194-80461213 Msa1042520:intron 45.0%
TGTGATAAGGCAACTTGCCA+AGG + chr7_1:80461265-80461284 Msa1042520:CDS 45.0%
AACTTTAATGCCCTCAGGAG+GGG - chr7_1:80461312-80461331 None:intergenic 45.0%
CAACTTTAATGCCCTCAGGA+GGG - chr7_1:80461313-80461332 None:intergenic 45.0%
ACAACTTTAATGCCCTCAGG+AGG - chr7_1:80461314-80461333 None:intergenic 45.0%
ACGACAACTTTAATGCCCTC+AGG - chr7_1:80461317-80461336 None:intergenic 45.0%
CGGAAAACTCCACTCTCATA+AGG - chr7_1:80461479-80461498 None:intergenic 45.0%
TTTCCACACTCTCCTCCTAA+AGG + chr7_1:80461524-80461543 Msa1042520:CDS 45.0%
GACACAAATCTCTCCACTGT+TGG - chr7_1:80461821-80461840 None:intergenic 45.0%
TTGTGTCAACGCGCTCAAAA+AGG + chr7_1:80461834-80461853 Msa1042520:CDS 45.0%
TCAACGCGCTCAAAAAGGAT+TGG + chr7_1:80461839-80461858 Msa1042520:CDS 45.0%
AAGGATTGGAATCCTAGCCT+TGG + chr7_1:80461853-80461872 Msa1042520:CDS 45.0%
! AGGATTGGAATCCTAGCCTT+GGG + chr7_1:80461854-80461873 Msa1042520:CDS 45.0%
TGCCAGGTGAGTTAAGCAAA+TGG + chr7_1:80462108-80462127 Msa1042520:intron 45.0%
CACCATTTGCTTAACTCACC+TGG - chr7_1:80462113-80462132 None:intergenic 45.0%
CTCAATTACAAGCAGATGCC+GGG - chr7_1:80462296-80462315 None:intergenic 45.0%
CCTCAATTACAAGCAGATGC+CGG - chr7_1:80462297-80462316 None:intergenic 45.0%
CGGCATCTGCTTGTAATTGA+GGG + chr7_1:80462295-80462314 Msa1042520:intron 45.0%
GGCATCTGCTTGTAATTGAG+GGG + chr7_1:80462296-80462315 Msa1042520:intron 45.0%
AAGAGGAACTAGTCAGGATC+AGG + chr7_1:80462515-80462534 Msa1042520:CDS 45.0%
TAATGTTTCTTCTGCTGCCG+CGG + chr7_1:80462569-80462588 Msa1042520:CDS 45.0%
TGCTCATGCACCACAAAAGA+GGG + chr7_1:80462602-80462621 Msa1042520:CDS 45.0%
! GTTCCAATGTCCCTCTTTTG+TGG - chr7_1:80462615-80462634 None:intergenic 45.0%
CATTGGAACTGCTAAAGCTC+AGG + chr7_1:80462626-80462645 Msa1042520:CDS 45.0%
AACAAAAAAAGAGGGGAGGG+GGG + chr7_1:80462779-80462798 Msa1042520:three_prime_UTR 45.0%
!! ACAAATAATAATAAAAATAA+GGG - chr7_1:80462873-80462892 None:intergenic 5.0%
!! AACAAATAATAATAAAAATA+AGG - chr7_1:80462874-80462893 None:intergenic 5.0%
!! ACAAATAATAATAAAAATAA+GGG - chr7_1:80462873-80462892 None:intergenic 5.0%
!! AACAAATAATAATAAAAATA+AGG - chr7_1:80462874-80462893 None:intergenic 5.0%
TGTGCAACAGGTTTGTCGTG+TGG + chr7_1:80460896-80460915 Msa1042520:intron 50.0%
TTCCATTTGGGCTTGTCGTG+TGG + chr7_1:80460991-80461010 Msa1042520:intron 50.0%
AACCACACGACAAGCCCAAA+TGG - chr7_1:80460996-80461015 None:intergenic 50.0%
! AGGCGGAAGATTTTCGTTGG+TGG - chr7_1:80461243-80461262 None:intergenic 50.0%
TCTTGATGAAACCCCTCCTG+AGG + chr7_1:80461298-80461317 Msa1042520:CDS 50.0%
CTTGATGAAACCCCTCCTGA+GGG + chr7_1:80461299-80461318 Msa1042520:CDS 50.0%
TTTGCTGACATTGAAGGCCC+TGG + chr7_1:80461362-80461381 Msa1042520:CDS 50.0%
GCTGCAACTCCTTATGAGAG+TGG + chr7_1:80461467-80461486 Msa1042520:intron 50.0%
! ACACCTTTAGGAGGAGAGTG+TGG - chr7_1:80461530-80461549 None:intergenic 50.0%
!! GGAATCCTAGCCTTGGGTTA+CGG + chr7_1:80461860-80461879 Msa1042520:CDS 50.0%
ATATGCCGTAACCCAAGGCT+AGG - chr7_1:80461868-80461887 None:intergenic 50.0%
! AGGAGTATGCTAGACATGCC+AGG + chr7_1:80462092-80462111 Msa1042520:CDS 50.0%
CCGGCATCTGCTTGTAATTG+AGG + chr7_1:80462294-80462313 Msa1042520:intron 50.0%
! GGGCTTTAATTGCGACATGC+AGG + chr7_1:80462316-80462335 Msa1042520:intron 50.0%
! GCGACATGCAGGCTTTTAAC+CGG + chr7_1:80462327-80462346 Msa1042520:intron 50.0%
! GATGTCAGCATTAAGCACCG+AGG - chr7_1:80462436-80462455 None:intergenic 50.0%
GACATCAAAACCATGCCGTC+AGG + chr7_1:80462450-80462469 Msa1042520:CDS 50.0%
ACTAGTTCCTCTTGCTCCAG+TGG - chr7_1:80462508-80462527 None:intergenic 50.0%
TGGAGCAAGAGGAACTAGTC+AGG + chr7_1:80462509-80462528 Msa1042520:CDS 50.0%
TAGTCAGGATCAGGCAGTAG+TGG + chr7_1:80462524-80462543 Msa1042520:CDS 50.0%
AGTCAGGATCAGGCAGTAGT+GGG + chr7_1:80462525-80462544 Msa1042520:CDS 50.0%
ATGAGCAGCAGAAACTACCG+CGG - chr7_1:80462589-80462608 None:intergenic 50.0%
CTGCTCATGCACCACAAAAG+AGG + chr7_1:80462601-80462620 Msa1042520:CDS 50.0%
GCACCACAAAAGAGGGACAT+TGG + chr7_1:80462609-80462628 Msa1042520:CDS 50.0%
GGGGAAGGGATATGGGTAAT+GGG + chr7_1:80462798-80462817 Msa1042520:three_prime_UTR 50.0%
TGTGCAACAGGTTTGTCGTG+TGG + chr7_1:80460896-80460915 Msa1042520:intron 50.0%
TTCCATTTGGGCTTGTCGTG+TGG + chr7_1:80460991-80461010 Msa1042520:intron 50.0%
AACCACACGACAAGCCCAAA+TGG - chr7_1:80460996-80461015 None:intergenic 50.0%
! AGGCGGAAGATTTTCGTTGG+TGG - chr7_1:80461243-80461262 None:intergenic 50.0%
TCTTGATGAAACCCCTCCTG+AGG + chr7_1:80461298-80461317 Msa1042520:CDS 50.0%
CTTGATGAAACCCCTCCTGA+GGG + chr7_1:80461299-80461318 Msa1042520:CDS 50.0%
TTTGCTGACATTGAAGGCCC+TGG + chr7_1:80461362-80461381 Msa1042520:CDS 50.0%
GCTGCAACTCCTTATGAGAG+TGG + chr7_1:80461467-80461486 Msa1042520:intron 50.0%
! ACACCTTTAGGAGGAGAGTG+TGG - chr7_1:80461530-80461549 None:intergenic 50.0%
!! GGAATCCTAGCCTTGGGTTA+CGG + chr7_1:80461860-80461879 Msa1042520:CDS 50.0%
ATATGCCGTAACCCAAGGCT+AGG - chr7_1:80461868-80461887 None:intergenic 50.0%
! AGGAGTATGCTAGACATGCC+AGG + chr7_1:80462092-80462111 Msa1042520:CDS 50.0%
CCGGCATCTGCTTGTAATTG+AGG + chr7_1:80462294-80462313 Msa1042520:intron 50.0%
! GGGCTTTAATTGCGACATGC+AGG + chr7_1:80462316-80462335 Msa1042520:intron 50.0%
! GCGACATGCAGGCTTTTAAC+CGG + chr7_1:80462327-80462346 Msa1042520:intron 50.0%
! GATGTCAGCATTAAGCACCG+AGG - chr7_1:80462436-80462455 None:intergenic 50.0%
GACATCAAAACCATGCCGTC+AGG + chr7_1:80462450-80462469 Msa1042520:CDS 50.0%
ACTAGTTCCTCTTGCTCCAG+TGG - chr7_1:80462508-80462527 None:intergenic 50.0%
TGGAGCAAGAGGAACTAGTC+AGG + chr7_1:80462509-80462528 Msa1042520:CDS 50.0%
TAGTCAGGATCAGGCAGTAG+TGG + chr7_1:80462524-80462543 Msa1042520:CDS 50.0%
AGTCAGGATCAGGCAGTAGT+GGG + chr7_1:80462525-80462544 Msa1042520:CDS 50.0%
ATGAGCAGCAGAAACTACCG+CGG - chr7_1:80462589-80462608 None:intergenic 50.0%
CTGCTCATGCACCACAAAAG+AGG + chr7_1:80462601-80462620 Msa1042520:CDS 50.0%
GCACCACAAAAGAGGGACAT+TGG + chr7_1:80462609-80462628 Msa1042520:CDS 50.0%
GGGGAAGGGATATGGGTAAT+GGG + chr7_1:80462798-80462817 Msa1042520:three_prime_UTR 50.0%
TTCGGAAGCTCCTCACTCCT+CGG + chr7_1:80460764-80460783 Msa1042520:five_prime_UTR 55.0%
AGTTCTGTCACCGAGGAGTG+AGG - chr7_1:80460777-80460796 None:intergenic 55.0%
GTTGAGGGCAATGACAGTGG+TGG - chr7_1:80462486-80462505 None:intergenic 55.0%
GTGGTTGAGGGCAATGACAG+TGG - chr7_1:80462489-80462508 None:intergenic 55.0%
CTGTCATTGCCCTCAACCAC+TGG + chr7_1:80462489-80462508 Msa1042520:CDS 55.0%
CCTCTTGCTCCAGTGGTTGA+GGG - chr7_1:80462501-80462520 None:intergenic 55.0%
TCCTCTTGCTCCAGTGGTTG+AGG - chr7_1:80462502-80462521 None:intergenic 55.0%
AAAAAAGAGGGGAGGGGGGA+AGG + chr7_1:80462783-80462802 Msa1042520:three_prime_UTR 55.0%
AAAAAGAGGGGAGGGGGGAA+GGG + chr7_1:80462784-80462803 Msa1042520:three_prime_UTR 55.0%
GGGGGAAGGGATATGGGTAA+TGG + chr7_1:80462797-80462816 Msa1042520:three_prime_UTR 55.0%
TTCGGAAGCTCCTCACTCCT+CGG + chr7_1:80460764-80460783 Msa1042520:five_prime_UTR 55.0%
AGTTCTGTCACCGAGGAGTG+AGG - chr7_1:80460777-80460796 None:intergenic 55.0%
GTTGAGGGCAATGACAGTGG+TGG - chr7_1:80462486-80462505 None:intergenic 55.0%
GTGGTTGAGGGCAATGACAG+TGG - chr7_1:80462489-80462508 None:intergenic 55.0%
CTGTCATTGCCCTCAACCAC+TGG + chr7_1:80462489-80462508 Msa1042520:CDS 55.0%
CCTCTTGCTCCAGTGGTTGA+GGG - chr7_1:80462501-80462520 None:intergenic 55.0%
TCCTCTTGCTCCAGTGGTTG+AGG - chr7_1:80462502-80462521 None:intergenic 55.0%
AAAAAAGAGGGGAGGGGGGA+AGG + chr7_1:80462783-80462802 Msa1042520:three_prime_UTR 55.0%
AAAAAGAGGGGAGGGGGGAA+GGG + chr7_1:80462784-80462803 Msa1042520:three_prime_UTR 55.0%
GGGGGAAGGGATATGGGTAA+TGG + chr7_1:80462797-80462816 Msa1042520:three_prime_UTR 55.0%
! GGGTTCCCTTGTGCTGCTGA+TGG + chr7_1:80460806-80460825 Msa1042520:exon 60.0%
CCCTCAACCACTGGAGCAAG+AGG + chr7_1:80462498-80462517 Msa1042520:CDS 60.0%
! GGGTTCCCTTGTGCTGCTGA+TGG + chr7_1:80460806-80460825 Msa1042520:exon 60.0%
CCCTCAACCACTGGAGCAAG+AGG + chr7_1:80462498-80462517 Msa1042520:CDS 60.0%
CAGAGCAGCACCTGACGGCA+TGG - chr7_1:80462463-80462482 None:intergenic 65.0%
GGTGGCAGAGCAGCACCTGA+CGG - chr7_1:80462468-80462487 None:intergenic 65.0%
AGGGGAGGGGGGAAGGGATA+TGG + chr7_1:80462790-80462809 Msa1042520:three_prime_UTR 65.0%
GGGGAGGGGGGAAGGGATAT+GGG + chr7_1:80462791-80462810 Msa1042520:three_prime_UTR 65.0%
CAGAGCAGCACCTGACGGCA+TGG - chr7_1:80462463-80462482 None:intergenic 65.0%
GGTGGCAGAGCAGCACCTGA+CGG - chr7_1:80462468-80462487 None:intergenic 65.0%
AGGGGAGGGGGGAAGGGATA+TGG + chr7_1:80462790-80462809 Msa1042520:three_prime_UTR 65.0%
GGGGAGGGGGGAAGGGATAT+GGG + chr7_1:80462791-80462810 Msa1042520:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 80459938 80462985 80459938 ID=Msa1042520;Name=Msa1042520
chr7_1 mRNA 80459938 80462985 80459938 ID=Msa1042520-mRNA-1;Parent=Msa1042520;Name=Msa1042520-mRNA-1;_AED=0.08;_eAED=0.08;_QI=171|1|1|1|0.83|0.71|7|287|267
chr7_1 exon 80459938 80460024 80459938 ID=Msa1042520-mRNA-1:exon:21913;Parent=Msa1042520-mRNA-1
chr7_1 exon 80460741 80460827 80460741 ID=Msa1042520-mRNA-1:exon:21914;Parent=Msa1042520-mRNA-1
chr7_1 exon 80461239 80461383 80461239 ID=Msa1042520-mRNA-1:exon:21915;Parent=Msa1042520-mRNA-1
chr7_1 exon 80461468 80461545 80461468 ID=Msa1042520-mRNA-1:exon:21916;Parent=Msa1042520-mRNA-1
chr7_1 exon 80461782 80461894 80461782 ID=Msa1042520-mRNA-1:exon:21917;Parent=Msa1042520-mRNA-1
chr7_1 exon 80462010 80462113 80462010 ID=Msa1042520-mRNA-1:exon:21918;Parent=Msa1042520-mRNA-1
chr7_1 exon 80462338 80462985 80462338 ID=Msa1042520-mRNA-1:exon:21919;Parent=Msa1042520-mRNA-1
chr7_1 five_prime_UTR 80459938 80460024 80459938 ID=Msa1042520-mRNA-1:five_prime_utr;Parent=Msa1042520-mRNA-1
chr7_1 five_prime_UTR 80460741 80460824 80460741 ID=Msa1042520-mRNA-1:five_prime_utr;Parent=Msa1042520-mRNA-1
chr7_1 CDS 80460825 80460827 80460825 ID=Msa1042520-mRNA-1:cds;Parent=Msa1042520-mRNA-1
chr7_1 CDS 80461239 80461383 80461239 ID=Msa1042520-mRNA-1:cds;Parent=Msa1042520-mRNA-1
chr7_1 CDS 80461468 80461545 80461468 ID=Msa1042520-mRNA-1:cds;Parent=Msa1042520-mRNA-1
chr7_1 CDS 80461782 80461894 80461782 ID=Msa1042520-mRNA-1:cds;Parent=Msa1042520-mRNA-1
chr7_1 CDS 80462010 80462113 80462010 ID=Msa1042520-mRNA-1:cds;Parent=Msa1042520-mRNA-1
chr7_1 CDS 80462338 80462698 80462338 ID=Msa1042520-mRNA-1:cds;Parent=Msa1042520-mRNA-1
chr7_1 three_prime_UTR 80462699 80462985 80462699 ID=Msa1042520-mRNA-1:three_prime_utr;Parent=Msa1042520-mRNA-1
Gene Sequence

>Msa1042520

ATGGCCACCAACGAAAATCTTCCGCCTAATGTGATAAGGCAACTTGCCAAGGAGTTGAAAAATCTTGATGAAACCCCTCCTGAGGGCATTAAAGTTGTCGTGAATGATGATGATTTTTCAACAATTTTTGCTGACATTGAAGGCCCTGCTGCAACTCCTTATGAGAGTGGAGTTTTCCGCATGAAGTTGAAACTATCGCATGATTTTCCACACTCTCCTCCTAAAGGATATTTCTTGACCAAGATTTTCCATCCAAATATTGCCAACAGTGGAGAGATTTGTGTCAACGCGCTCAAAAAGGATTGGAATCCTAGCCTTGGGTTACGGCATATTCTTATCGTTGTTAGGTGTCTATTGATTGAACCGTTTCCAGAATCAGCTTTAAATGAACTGGCTGGTAAACTACTGCTTGAAAATTATGAGGAGTATGCTAGACATGCCAGGCTTTTAACCGGAATCCATGCAAAATCAAAGCCGAAATTCAAAAGTGGAGCTATAACCGAATCAACTACTGCTCTGAATGTTGATCAGACAAACACCTCGGTGCTTAATGCTGACATCAAAACCATGCCGTCAGGTGCTGCTCTGCCACCACTGTCATTGCCCTCAACCACTGGAGCAAGAGGAACTAGTCAGGATCAGGCAGTAGTGGGCGTTCTGACCGAGTCGTCTGCTAATGTTTCTTCTGCTGCCGCGGTAGTTTCTGCTGCTCATGCACCACAAAAGAGGGACATTGGAACTGCTAAAGCTCAGGCAGACAAGAAGAAGCTAGATGCTAGAAAGAAAAGTTTGAAAAGATTGTGA
Protein sequence

>Msa1042520

MATNENLPPNVIRQLAKELKNLDETPPEGIKVVVNDDDFSTIFADIEGPAATPYESGVFRMKLKLSHDFPHSPPKGYFLTKIFHPNIANSGEICVNALKKDWNPSLGLRHILIVVRCLLIEPFPESALNELAGKLLLENYEEYARHARLLTGIHAKSKPKFKSGAITESTTALNVDQTNTSVLNADIKTMPSGAALPPLSLPSTTGARGTSQDQAVVGVLTESSANVSSAAAVVSAAHAPQKRDIGTAKAQADKKKLDARKKSLKRL*