AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1248220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1248220 MtrunA17_Chr8g0362571 84.308 975 75 7 1 959 1 913 0.0 1617
Msa1248220 MtrunA17_Chr1g0157251 41.111 450 193 8 510 955 50 431 2.20e-115 360
Msa1248220 MtrunA17_Chr7g0218861 57.203 236 95 4 724 954 725 959 6.44e-86 296
Msa1248220 MtrunA17_Chr7g0218861 61.850 173 56 3 506 669 562 733 2.35e-62 229
Msa1248220 MtrunA17_Chr1g0153391 52.101 238 103 5 724 955 189 421 2.10e-71 243
Msa1248220 MtrunA17_Chr1g0153391 43.195 169 87 4 510 669 29 197 1.59e-36 143
Msa1248220 MtrunA17_Chr1g0153421 45.133 226 112 6 738 957 2 221 4.42e-53 184
Msa1248220 MtrunA17_Chr1g0153411 40.351 171 90 6 510 669 29 198 1.49e-34 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1248220 AT1G69830.1 62.123 895 256 11 69 955 66 885 0.0 1111
Msa1248220 AT1G76130.2 42.539 449 186 8 511 955 32 412 4.06e-116 362
Msa1248220 AT1G76130.1 42.539 449 186 8 511 955 32 412 4.06e-116 362
Msa1248220 AT4G25000.1 46.809 235 118 5 724 955 191 421 2.04e-59 210
Msa1248220 AT4G25000.1 44.048 168 85 4 511 669 32 199 9.37e-35 138

Find 259 sgRNAs with CRISPR-Local

Find 586 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCCATTGGGGAGTTTC+TGG 0.103563 8_2:+41852824 Msa1248220:CDS
TCAATTACTTCAAAAGTTTA+TGG 0.108808 8_2:-41860645 None:intergenic
CCATAGGCTTATTGTATAAT+TGG 0.117740 8_2:+41860382 Msa1248220:three_prime_UTR
TCTCACTATAAAACTGAAAT+AGG 0.119288 8_2:+41859288 Msa1248220:CDS
GTAGCAAAAGTTTCAAATTT+TGG 0.135634 8_2:-41851991 None:intergenic
AAACTATTGTCTACCTTTAT+AGG 0.158801 8_2:-41853227 None:intergenic
CTCTTGGCTTTACTGTTATT+TGG 0.163991 8_2:+41855588 Msa1248220:CDS
AAGGAGGATGCTAATTTAAT+TGG 0.164978 8_2:+41853635 Msa1248220:CDS
TTGACTTTGTCAGAGGATTT+TGG 0.181955 8_2:+41857897 Msa1248220:CDS
AATGGTTTCTTGAGCTTCTT+TGG 0.188878 8_2:-41855319 None:intergenic
AATGGTATTTGGAACATATT+TGG 0.190723 8_2:+41856209 Msa1248220:CDS
GAAATAAGGCATTTGGTTAC+TGG 0.216838 8_2:+41855264 Msa1248220:CDS
GAGAGAGAGTGTGAAGAATT+TGG 0.220547 8_2:-41851895 None:intergenic
ATTGTATGCCAAGGTTTAAT+TGG 0.234209 8_2:+41855504 Msa1248220:intron
CTTCCCTTTCCACTTCCTTT+TGG 0.255177 8_2:-41855018 None:intergenic
CTCACTATAAAACTGAAATA+GGG 0.260976 8_2:+41859289 Msa1248220:CDS
ATTTATATAATTTAAATTCT+AGG 0.265509 8_2:+41855660 Msa1248220:CDS
ACTATGGTTCTTCTTGTTCT+TGG 0.272636 8_2:+41851938 Msa1248220:CDS
ACAGTAACTTCCTTGGTTAA+AGG 0.278492 8_2:-41854387 None:intergenic
ATAAACGTCCCTTTCTGATT+TGG 0.282607 8_2:-41860159 None:intergenic
TATTTCATTGATTATTTCAT+TGG 0.290467 8_2:-41855247 None:intergenic
ATGAAATAATCAATGAAATA+AGG 0.296161 8_2:+41855250 Msa1248220:CDS
TGTGGAATCCGAGGTTGTTT+TGG 0.299314 8_2:+41855422 Msa1248220:CDS
AAGAACACTGACGGAGTTCC+TGG 0.299428 8_2:-41859252 None:intergenic
TAATTTCAGCTTCTGAAATC+AGG 0.301033 8_2:-41857438 None:intergenic
ACTTCCGGTAGCTCAGTTAT+TGG 0.310168 8_2:+41855153 Msa1248220:CDS
ATTTGGCTTGAAACGGTTAA+TGG 0.313857 8_2:-41851878 None:intergenic
TTAAGATAAATGAAAATTCA+TGG 0.318297 8_2:+41855091 Msa1248220:CDS
ACTACCAATATTATTAACTA+TGG 0.319695 8_2:+41851922 Msa1248220:CDS
ACGGAAGAGACTACAAGATT+TGG 0.334541 8_2:+41860273 Msa1248220:CDS
TATTTGGAGGTCGTCTCAAC+TGG 0.344947 8_2:+41856225 Msa1248220:CDS
TACGTCCCTCTCTCAACTTC+CGG 0.350003 8_2:+41855138 Msa1248220:CDS
AGTTTGGCGAACTCAATTAA+AGG 0.353674 8_2:+41854590 Msa1248220:CDS
GTGAAAGAATTTCATAAAGT+TGG 0.354126 8_2:+41856128 Msa1248220:CDS
AGGGAATGATTTGAAGAATT+CGG 0.355616 8_2:+41852766 Msa1248220:CDS
ATCAGAATAAGAATGGTATT+TGG 0.356883 8_2:+41856198 Msa1248220:CDS
GATGCAATCTACCAGGAAAA+TGG 0.357710 8_2:+41852801 Msa1248220:CDS
AGAACCATAGTTAATAATAT+TGG 0.357836 8_2:-41851926 None:intergenic
AAGTTCAGTACAAATCTCTT+TGG 0.357845 8_2:+41855038 Msa1248220:CDS
AGAGAAGAAATTGGATATGA+TGG 0.358210 8_2:+41857866 Msa1248220:intron
CTCTCTATTCGGAAACGAAA+CGG 0.361386 8_2:+41859318 Msa1248220:CDS
GTTTCTGGTGTGGATGATAT+TGG 0.363105 8_2:+41852839 Msa1248220:CDS
AATCAATGAAATAAGGCATT+TGG 0.365401 8_2:+41855257 Msa1248220:CDS
AATTGGGAGTCTAATAAATC+TGG 0.367354 8_2:+41855521 Msa1248220:CDS
AAGAATGGTTATGCTGGTTA+AGG 0.367519 8_2:+41856869 Msa1248220:CDS
TTGTTTAGTCTTGGTTTCAT+TGG 0.368221 8_2:+41857022 Msa1248220:intron
TCCTGGATCTATTCCTATAA+AGG 0.369975 8_2:+41853214 Msa1248220:CDS
ATCCCTTGGCATGTATCCTT+CGG 0.372788 8_2:-41855639 None:intergenic
TACTCTCCCACGCAAAAGTA+TGG 0.374781 8_2:-41857956 None:intergenic
TACCAGTTCAATTCTGTTGA+TGG 0.381799 8_2:-41852076 None:intergenic
AATTTAATTGGACCTAAAAC+AGG 0.381891 8_2:+41853647 Msa1248220:CDS
CTAAGAACTGATATACTGTT+TGG 0.387228 8_2:+41860677 Msa1248220:three_prime_UTR
AGTTTCAAATATTGATTTGA+AGG 0.392152 8_2:-41860525 None:intergenic
AATCGCTGAAATCTCATTGC+TGG 0.396602 8_2:-41853415 None:intergenic
ACAGTATATCAGTTCTTAGA+TGG 0.398080 8_2:-41860673 None:intergenic
CTTGGTTTCATTGGAAATGT+TGG 0.401457 8_2:+41857031 Msa1248220:CDS
TTGTATGCCAAGGTTTAATT+GGG 0.405118 8_2:+41855505 Msa1248220:intron
TCCTCTGGTAAACTATCTTA+AGG 0.405222 8_2:+41853616 Msa1248220:CDS
TCTCTATTCGGAAACGAAAC+GGG 0.405642 8_2:+41859319 Msa1248220:CDS
CAGTTATACATATGGTGAAA+TGG 0.406347 8_2:+41857991 Msa1248220:CDS
TAGAGATGATTCAAGAAGTT+GGG 0.407862 8_2:+41854518 Msa1248220:CDS
AAGAATTCGGAGCTTATAGT+TGG 0.409365 8_2:+41852779 Msa1248220:CDS
AGGAAAATGGATTCTCCATT+GGG 0.411752 8_2:+41852814 Msa1248220:CDS
TAGGGGCACTTCTCTCTATT+CGG 0.412063 8_2:+41859307 Msa1248220:CDS
TCCCTTGGCATGTATCCTTC+GGG 0.412074 8_2:-41855638 None:intergenic
CGGAAGAGACTACAAGATTT+GGG 0.413097 8_2:+41860274 Msa1248220:CDS
AGTTCAGTACAAATCTCTTT+GGG 0.413915 8_2:+41855039 Msa1248220:CDS
GTAGAGATGATTCAAGAAGT+TGG 0.415469 8_2:+41854517 Msa1248220:CDS
TCTTTATATGCTACAGTTTG+TGG 0.420943 8_2:-41854564 None:intergenic
CGTTGGAAAGATGTGAATAT+TGG 0.422823 8_2:+41858689 Msa1248220:CDS
TGGAGGCAACTCAGGTGATT+CGG 0.422854 8_2:-41855448 None:intergenic
TTGGCGCTTGTCGGATCGGC+AGG 0.422951 8_2:+41858708 Msa1248220:CDS
GGTTCATTTCAGCTTAAGTC+TGG 0.423115 8_2:+41860484 Msa1248220:three_prime_UTR
TGTAACATCTTCCTTGCAAA+AGG 0.423205 8_2:+41851759 Msa1248220:five_prime_UTR
ATCTTTGTCTCAGAACGTTC+TGG 0.423881 8_2:+41857379 Msa1248220:CDS
GGTTCCCATCAGATAGCATC+TGG 0.425933 8_2:-41857416 None:intergenic
TAGCATATAAAGACACAGTT+TGG 0.430766 8_2:+41854574 Msa1248220:CDS
TCTTTCAATTTCTTGAAGAA+TGG 0.430927 8_2:-41855337 None:intergenic
TGAGGTTCTAAAGATACTAT+AGG 0.434562 8_2:-41855373 None:intergenic
ATAATGTCGGGAACAGGCAC+AGG 0.439096 8_2:+41855474 Msa1248220:CDS
TCCTGTGAATGATCAATGTT+TGG 0.444598 8_2:-41856826 None:intergenic
TCATAAAGAGTATCTCCTTC+CGG 0.451981 8_2:-41853372 None:intergenic
TCGATGCAGGACGAGGAAAC+TGG 0.453145 8_2:+41853557 Msa1248220:intron
ACCATTCTTATTCTGATGCT+CGG 0.463781 8_2:-41856192 None:intergenic
TCCCACGCAAAAGTATGGTT+TGG 0.464670 8_2:-41857951 None:intergenic
TCCCATCAACAGAATTGAAC+TGG 0.465937 8_2:+41852074 Msa1248220:CDS
TGAGAAACGATATTAAAGAA+TGG 0.466017 8_2:+41856854 Msa1248220:CDS
CACAGAGTGAAGAATCCCTT+TGG 0.466936 8_2:-41858098 None:intergenic
CTTAGTATTAGCTTCTAAGA+AGG 0.471224 8_2:-41851707 None:intergenic
GAGATACTCTTTATGAAGTC+AGG 0.472117 8_2:+41853379 Msa1248220:CDS
TTTAAATTATATAAATCCCT+TGG 0.473963 8_2:-41855653 None:intergenic
GTGAAGAATTTGGCTTGAAA+CGG 0.474351 8_2:-41851885 None:intergenic
TGATCTGACTTACATTTCAC+TGG 0.474451 8_2:+41854218 Msa1248220:CDS
TGGAGAATTGAGATGGTATC+TGG 0.480066 8_2:+41857051 Msa1248220:CDS
GTTATTGACAGTAACTTCCT+TGG 0.481501 8_2:-41854394 None:intergenic
GATTCCCTCAGTTATACATA+TGG 0.481642 8_2:+41857983 Msa1248220:CDS
AAGAGACTTCAAAGTTCCTC+TGG 0.481998 8_2:+41853601 Msa1248220:CDS
AAGAAATTGGATATGATGGA+TGG 0.482079 8_2:+41857870 Msa1248220:CDS
CAGGAAAATGGATTCTCCAT+TGG 0.484531 8_2:+41852813 Msa1248220:CDS
CTTTCTTCTATACAGGGGAG+GGG 0.484650 8_2:+41856769 Msa1248220:intron
TCTTCAAGAAATTGAAAGAC+TGG 0.486638 8_2:+41855341 Msa1248220:CDS
CAGAAGATTGAATCTGTTGA+AGG 0.487387 8_2:-41852026 None:intergenic
GGCCACCATCCCATAACGCC+GGG 0.488652 8_2:-41858739 None:intergenic
ATGTGAATATTGGCGCTTGT+CGG 0.489121 8_2:+41858699 Msa1248220:CDS
ACCAGTTCAATTCTGTTGAT+GGG 0.490268 8_2:-41852075 None:intergenic
GCTAAAGAACTAGCATCTCT+TGG 0.494064 8_2:+41855572 Msa1248220:CDS
CTCTACAAACTCCCCAATGA+AGG 0.495764 8_2:-41854500 None:intergenic
ATAGTTAATAATATTGGTAG+TGG 0.496843 8_2:-41851920 None:intergenic
CATCAGATAGCATCTGGGAT+TGG 0.497311 8_2:-41857410 None:intergenic
AGACTACAAGATTTGGGAGC+TGG 0.499681 8_2:+41860280 Msa1248220:CDS
TAAAATTACCAAATCAGAAA+GGG 0.504939 8_2:+41860151 Msa1248220:CDS
CCTCACTCATAGGGAACATA+GGG 0.506379 8_2:+41854245 Msa1248220:CDS
CTCGGAGAAAGCTGGAACTG+AGG 0.506669 8_2:-41855391 None:intergenic
TCCTCACTCATAGGGAACAT+AGG 0.510395 8_2:+41854244 Msa1248220:CDS
GTGTTTATAAGATTAGATCA+AGG 0.510606 8_2:+41852746 Msa1248220:CDS
CGATCTGTTATGTAGCCAAA+AGG 0.511112 8_2:+41855003 Msa1248220:intron
CATTTGATGTTACAACCAAA+GGG 0.513448 8_2:+41858083 Msa1248220:CDS
ATGATAGGTGGTCGTGGTGA+TGG 0.513841 8_2:-41851784 None:intergenic
ATAGCTTCCTCGGAGAAAGC+TGG 0.514012 8_2:-41855399 None:intergenic
ATATCTCATTGCCTTACCAT+AGG 0.516197 8_2:+41860366 Msa1248220:three_prime_UTR
AATTTCAGCTTCTGAAATCA+GGG 0.516812 8_2:-41857437 None:intergenic
ATCGCTGAAATCTCATTGCT+GGG 0.520442 8_2:-41853414 None:intergenic
GCATTTGATGTTACAACCAA+AGG 0.521112 8_2:+41858082 Msa1248220:CDS
AATATTGGCGCTTGTCGGAT+CGG 0.521196 8_2:+41858704 Msa1248220:CDS
TAGCCAAAAGGAAGTGGAAA+GGG 0.521578 8_2:+41855015 Msa1248220:intron
ACTCTATCAGTGTCTCCGTT+AGG 0.521785 8_2:+41854415 Msa1248220:CDS
CCAATTATACAATAAGCCTA+TGG 0.524563 8_2:-41860382 None:intergenic
GATGATGATGATTTCTTCAA+AGG 0.524610 8_2:-41853348 None:intergenic
ATCAAGATGCACACAGGCAG+AGG 0.525851 8_2:+41858020 Msa1248220:CDS
AGCTAATACTAAGAAGCAAA+AGG 0.526972 8_2:+41851717 Msa1248220:five_prime_UTR
GTTATGTAGCCAAAAGGAAG+TGG 0.527882 8_2:+41855009 Msa1248220:intron
TAATCTGCAGGTGGAGGGAA+AGG 0.530804 8_2:+41852724 Msa1248220:intron
ACAGGCAGAGGATCGTTGAC+TGG 0.534572 8_2:+41858032 Msa1248220:CDS
GGTATTTGGAACATATTTGG+AGG 0.534787 8_2:+41856212 Msa1248220:CDS
CACATCCTTCAGTTCATCAA+TGG 0.535296 8_2:-41856105 None:intergenic
ATATTAAAGAATGGTTATGC+TGG 0.535991 8_2:+41856863 Msa1248220:CDS
TTATATGCTACAGTTTGTGG+TGG 0.536406 8_2:-41854561 None:intergenic
GGATTCCACAATAGCTTCCT+CGG 0.538172 8_2:-41855409 None:intergenic
GTTTGTGGTGGATGAGGAGC+AGG 0.542061 8_2:-41854549 None:intergenic
TTAAAATTACCAAATCAGAA+AGG 0.543716 8_2:+41860150 Msa1248220:CDS
TTTCTCCGAGGAAGCTATTG+TGG 0.544731 8_2:+41855404 Msa1248220:CDS
CCTCGTGATATGATACCTCC+TGG 0.545054 8_2:+41853197 Msa1248220:CDS
AAAGTTGGAATCAAAGTGCT+AGG 0.546749 8_2:+41856143 Msa1248220:CDS
AGTCTAATAAATCTGGAAGA+TGG 0.547837 8_2:+41855528 Msa1248220:CDS
CAATCCCAGATGCTATCTGA+TGG 0.548028 8_2:+41857411 Msa1248220:CDS
AGTGCTGCCGGTGGTACTGC+AGG 0.548738 8_2:+41858058 Msa1248220:CDS
AATATATGAATTGTAAACAT+AGG 0.550004 8_2:-41860564 None:intergenic
CTTATTGTATAATTGGATGA+TGG 0.551028 8_2:+41860389 Msa1248220:three_prime_UTR
TATAATTGGATGATGGTGTC+AGG 0.553125 8_2:+41860396 Msa1248220:three_prime_UTR
TCACTATAAAACTGAAATAG+GGG 0.555915 8_2:+41859290 Msa1248220:CDS
TCCAAACATTGATCATTCAC+AGG 0.559398 8_2:+41856825 Msa1248220:CDS
TAAATCTGGAAGATGGTACA+TGG 0.559670 8_2:+41855535 Msa1248220:CDS
AAATTCATGGTTAAATAACA+AGG 0.562174 8_2:+41855104 Msa1248220:CDS
TGTTTATAAGATTAGATCAA+GGG 0.564271 8_2:+41852747 Msa1248220:CDS
GCTACAGTTTGTGGTGGATG+AGG 0.564756 8_2:-41854555 None:intergenic
CAGAAGTATCATTATAGAGA+AGG 0.565181 8_2:+41860453 Msa1248220:three_prime_UTR
ACCTTTATAGGAATAGATCC+AGG 0.566563 8_2:-41853215 None:intergenic
GAAGAAATCATCATCATCAC+CGG 0.568649 8_2:+41853353 Msa1248220:CDS
GTTGCCAATAACTGAGCTAC+CGG 0.569553 8_2:-41855157 None:intergenic
GCCGAGCATCAGAATAAGAA+TGG 0.569584 8_2:+41856191 Msa1248220:CDS
TGTAGAACTGCCTTTAACCA+AGG 0.570430 8_2:+41854377 Msa1248220:CDS
ATTGCTATGAAGATCGGTCC+TGG 0.571864 8_2:+41860203 Msa1248220:CDS
AGAACGTTCTGAGACAAAGA+TGG 0.573852 8_2:-41857377 None:intergenic
ACTCTTTATGAAGTCAGGAT+CGG 0.574850 8_2:+41853384 Msa1248220:CDS
TATACAATAAGCCTATGGTA+AGG 0.575566 8_2:-41860377 None:intergenic
AGAACACTGACGGAGTTCCT+GGG 0.576561 8_2:-41859251 None:intergenic
AGAACTGATATACTGTTTGG+AGG 0.576961 8_2:+41860680 Msa1248220:three_prime_UTR
CAATGAAGGAAAATATCACC+TGG 0.578377 8_2:-41854486 None:intergenic
TTTATAGAAAACCACGACAC+TGG 0.578589 8_2:+41858778 Msa1248220:CDS
CCACCATCCCATAACGCCGG+GGG 0.578937 8_2:-41858737 None:intergenic
AAATGCACCTGCAGTACCAC+CGG 0.579580 8_2:-41858065 None:intergenic
TGGTTATGTAAAGGACTACA+TGG 0.581785 8_2:+41857922 Msa1248220:CDS
TGGAGGCTTGACTTTGTCAG+AGG 0.583959 8_2:+41857890 Msa1248220:CDS
GAGTGAAGAGGCAGGCGAAG+AGG 0.586230 8_2:+41855206 Msa1248220:CDS
GAAAGTTGTAAAGAGTGAAG+AGG 0.588257 8_2:+41855194 Msa1248220:CDS
ATTATAGAGAAGGTTGCAGA+GGG 0.589865 8_2:+41860463 Msa1248220:three_prime_UTR
GTTGTAAAGAGTGAAGAGGC+AGG 0.590094 8_2:+41855198 Msa1248220:CDS
TGTTTCTGAGCATTTCCTAA+CGG 0.590931 8_2:-41854430 None:intergenic
CCATTGGGGAGTTTCTGGTG+TGG 0.591387 8_2:+41852829 Msa1248220:CDS
ACAGGCTTTAGTTTGTCCCA+AGG 0.592504 8_2:+41853665 Msa1248220:CDS
CACCCGAAGGATACATGCCA+AGG 0.593755 8_2:+41855636 Msa1248220:CDS
ACACACAACACAACACAAGT+TGG 0.595057 8_2:+41851683 None:intergenic
GTAGCCAAAAGGAAGTGGAA+AGG 0.595926 8_2:+41855014 Msa1248220:intron
GATAGTTTGAAATTGAAGAG+TGG 0.596361 8_2:-41851835 None:intergenic
AAATGTAATCTGCAGGTGGA+GGG 0.600153 8_2:+41852719 Msa1248220:intron
GATTTAGAAACGGATATACC+AGG 0.600340 8_2:+41854468 Msa1248220:CDS
AATCCCAGATGCTATCTGAT+GGG 0.601902 8_2:+41857412 Msa1248220:CDS
ACTCATAGGGAACATAGGGC+AGG 0.605549 8_2:+41854249 Msa1248220:CDS
GATCAATGTTTGGAGCCGCA+TGG 0.607937 8_2:-41856816 None:intergenic
CTCATTAAATAAATGTTGTG+AGG 0.608339 8_2:-41854193 None:intergenic
CATTATAGAGAAGGTTGCAG+AGG 0.608423 8_2:+41860462 Msa1248220:three_prime_UTR
AGAAGCGATTGACAAAGTCT+AGG 0.609499 8_2:-41857240 None:intergenic
GTTGACTGGATTAGTGCTGC+CGG 0.609834 8_2:+41858046 Msa1248220:CDS
GTGGTGGAGATGCTCATGAT+AGG 0.610657 8_2:-41851799 None:intergenic
CTACAAGATTTGGGAGCTGG+AGG 0.611194 8_2:+41860283 Msa1248220:CDS
CCCTATGTTCCCTATGAGTG+AGG 0.611656 8_2:-41854245 None:intergenic
GGGAGGGGCAACAAGAGTAG+TGG 0.612121 8_2:+41856784 Msa1248220:CDS
ATTTGGAGGTCGTCTCAACT+GGG 0.613014 8_2:+41856226 Msa1248220:CDS
ATAGTTGGATGCAATCTACC+AGG 0.613023 8_2:+41852794 Msa1248220:CDS
GAAACAGAGTCTGTAGGTGG+CGG 0.614812 8_2:-41855614 None:intergenic
AAATTGGATATGATGGATGG+AGG 0.615727 8_2:+41857873 Msa1248220:CDS
CTAGGTGGTTCATAATGACC+AGG 0.616324 8_2:-41860221 None:intergenic
ATGCTCATGATAGGTGGTCG+TGG 0.617470 8_2:-41851790 None:intergenic
AGAAGATTGAATCTGTTGAA+GGG 0.618052 8_2:-41852025 None:intergenic
ATCATAATCAAGATGCACAC+AGG 0.619941 8_2:+41858014 Msa1248220:CDS
CGGCCACCATCCCATAACGC+CGG 0.620704 8_2:-41858740 None:intergenic
AGGACGAGGAAACTGGCACT+TGG 0.620719 8_2:+41853564 Msa1248220:intron
TTCGGATTCCAAAACAACCT+CGG 0.621124 8_2:-41855430 None:intergenic
AGCTACCGGAAGTTGAGAGA+GGG 0.621352 8_2:-41855143 None:intergenic
CCACGACACTGGTTCTACAC+AGG 0.621703 8_2:+41858789 Msa1248220:CDS
ATAAAAGTAACGGCACGAGA+CGG 0.624117 8_2:-41858760 None:intergenic
TCCTTAAGATAGTTTACCAG+AGG 0.626240 8_2:-41853617 None:intergenic
TGGTACCATTGATGAACTGA+AGG 0.629503 8_2:+41856100 Msa1248220:CDS
TAGGAGCTTGAGGCAATGCG+TGG 0.630759 8_2:-41857221 None:intergenic
AATTCATGGTTAAATAACAA+GGG 0.635549 8_2:+41855105 Msa1248220:CDS
TTCACCATATGTATAACTGA+GGG 0.635616 8_2:-41857987 None:intergenic
AAATGGAAATCAGCTTGGGA+CGG 0.636057 8_2:+41860254 Msa1248220:CDS
TGGTTCAGAGAAAACAGTGG+TGG 0.636081 8_2:-41851815 None:intergenic
GAAATGTTGGAGAATTGAGA+TGG 0.637015 8_2:+41857044 Msa1248220:CDS
ACAGACTCTGTTTCACCCGA+AGG 0.638131 8_2:+41855623 Msa1248220:CDS
TCGGGTGAAACAGAGTCTGT+AGG 0.639431 8_2:-41855620 None:intergenic
AAAGATACTATAGGCTTCAG+CGG 0.639584 8_2:-41855364 None:intergenic
TGACAAAGTCTAGGAGCTTG+AGG 0.640173 8_2:-41857231 None:intergenic
CATTGATGAACTGAAGGATG+TGG 0.641184 8_2:+41856106 Msa1248220:CDS
TTTCACCATATGTATAACTG+AGG 0.642730 8_2:-41857988 None:intergenic
AAATCATCATCATCACCGGA+AGG 0.643044 8_2:+41853357 Msa1248220:CDS
GAGCTTGAGGCAATGCGTGG+AGG 0.643404 8_2:-41857218 None:intergenic
GAGCTACCGGAAGTTGAGAG+AGG 0.643646 8_2:-41855144 None:intergenic
ACCCGAAGGATACATGCCAA+GGG 0.644490 8_2:+41855637 Msa1248220:CDS
TGTGGTGGATGAGGAGCAGG+TGG 0.645049 8_2:-41854546 None:intergenic
ATGTGGTCAAAGAACACTGA+CGG 0.646715 8_2:-41859261 None:intergenic
TTTGGAGAGAGAAACTTATG+GGG 0.652371 8_2:-41851973 None:intergenic
GGTTAATGGTAGCTAATCTG+TGG 0.652438 8_2:-41851864 None:intergenic
CCCCACGGAAAAGAAATGCA+AGG 0.652968 8_2:+41859207 Msa1248220:CDS
CTCAGTTCCAGCTTTCTCCG+AGG 0.653474 8_2:+41855392 Msa1248220:CDS
TCTGGTAAACTATCTTAAGG+AGG 0.654888 8_2:+41853619 Msa1248220:CDS
GGAAGCTATTGTGGAATCCG+AGG 0.655431 8_2:+41855413 Msa1248220:CDS
TGGCGCTTGTCGGATCGGCA+GGG 0.656406 8_2:+41858709 Msa1248220:CDS
GTTCCCATCAGATAGCATCT+GGG 0.659874 8_2:-41857415 None:intergenic
CTGGTGTGGATGATATTGGA+AGG 0.663725 8_2:+41852843 Msa1248220:CDS
TAATGTCGGGAACAGGCACA+GGG 0.666101 8_2:+41855475 Msa1248220:CDS
CTCAGTTATTGGCAACAGAG+AGG 0.668523 8_2:+41855164 Msa1248220:CDS
CCTGTGTAGAACCAGTGTCG+TGG 0.669185 8_2:-41858789 None:intergenic
GCTTATACTCTTACTCACCC+AGG 0.670081 8_2:+41859234 Msa1248220:CDS
GCCACCATCCCATAACGCCG+GGG 0.671307 8_2:-41858738 None:intergenic
CCACACCAGAAACTCCCCAA+TGG 0.673828 8_2:-41852829 None:intergenic
TTGGATGATGGTGTCAGGTG+TGG 0.674216 8_2:+41860401 Msa1248220:three_prime_UTR
CCAGGAGGTATCATATCACG+AGG 0.674605 8_2:-41853197 None:intergenic
GGTGAAACAGAGTCTGTAGG+TGG 0.678034 8_2:-41855617 None:intergenic
CACCATCCCATAACGCCGGG+GGG 0.681225 8_2:-41858736 None:intergenic
GTGGAGATGCTCATGATAGG+TGG 0.684639 8_2:-41851796 None:intergenic
GGCACTTGGTATCAACACAA+AGG 0.687243 8_2:+41853578 Msa1248220:CDS
GACTGGATTAGTGCTGCCGG+TGG 0.691174 8_2:+41858049 Msa1248220:CDS
GGAAAATGGATTCTCCATTG+GGG 0.705013 8_2:+41852815 Msa1248220:CDS
GGAGGTATCATATCACGAGG+TGG 0.714360 8_2:-41853194 None:intergenic
GGTCACTGGAGATTTCCCCA+CGG 0.740872 8_2:+41859192 Msa1248220:CDS
TAGTGGAGATAGTTTCCATG+CGG 0.748696 8_2:+41856801 Msa1248220:CDS
GAGTGGTTCAGAGAAAACAG+TGG 0.759302 8_2:-41851818 None:intergenic
TTTATAGGAATAGATCCAGG+AGG 0.764420 8_2:-41853212 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTATGATTTTTATAG+TGG + chr8_2:41852175-41852194 Msa1248220:intron 10.0%
!! GATTAAATAAATTGATTAAA+AGG - chr8_2:41854160-41854179 None:intergenic 10.0%
!! AATAGATAAATCTTATAATA+TGG + chr8_2:41854733-41854752 Msa1248220:intron 10.0%
!!! AATTTTACTTTTTTTTTTAG+GGG - chr8_2:41854889-41854908 None:intergenic 10.0%
!! TTTGAATTATATATTAAGAT+TGG + chr8_2:41854940-41854959 Msa1248220:intron 10.0%
!! ATATTATAAATCTACAAAAA+TGG - chr8_2:41858960-41858979 None:intergenic 10.0%
!!! ATATGTATATATCAACTTTT+TGG + chr8_2:41852100-41852119 Msa1248220:intron 15.0%
!!! AAATCATAATTTTTTCATCT+GGG - chr8_2:41852169-41852188 None:intergenic 15.0%
!!! AAAATCATAATTTTTTCATC+TGG - chr8_2:41852170-41852189 None:intergenic 15.0%
!! GAAATAGTAAAAATGTTAAA+GGG + chr8_2:41852197-41852216 Msa1248220:intron 15.0%
!!! AATTTTGTTTTGTATAAATG+TGG + chr8_2:41852267-41852286 Msa1248220:intron 15.0%
!!! ATCTACTTCTAAAATAAAAA+GGG - chr8_2:41852652-41852671 None:intergenic 15.0%
!!! TATCTACTTCTAAAATAAAA+AGG - chr8_2:41852653-41852672 None:intergenic 15.0%
!!! AGATTATATTAATTTGTAAC+AGG + chr8_2:41853058-41853077 Msa1248220:intron 15.0%
!!! AAATATTTTGGATTTAGAAA+CGG + chr8_2:41854458-41854477 Msa1248220:CDS 15.0%
!! AAATATAGAAAACGAAAAAA+CGG - chr8_2:41854623-41854642 None:intergenic 15.0%
!! TATTACGATTTAAATAAATG+CGG - chr8_2:41854717-41854736 None:intergenic 15.0%
!! TTAAGATAAATGAAAATTCA+TGG + chr8_2:41855091-41855110 Msa1248220:CDS 15.0%
!!! TATTTCATTGATTATTTCAT+TGG - chr8_2:41855250-41855269 None:intergenic 15.0%
!! ATGAAATAATCAATGAAATA+AGG + chr8_2:41855250-41855269 Msa1248220:CDS 15.0%
!! TTTAAATTATATAAATCCCT+TGG - chr8_2:41855656-41855675 None:intergenic 15.0%
!!! CTACTTTTTAAAATTATTTC+CGG - chr8_2:41855782-41855801 None:intergenic 15.0%
!! TAGGTAAATATGATATATAT+TGG + chr8_2:41856734-41856753 Msa1248220:intron 15.0%
!!! AAAGCTTAGTAATTTTTTAT+TGG + chr8_2:41858833-41858852 Msa1248220:intron 15.0%
!! TGTTTATAATTACACTAAAA+TGG - chr8_2:41858995-41859014 None:intergenic 15.0%
!!! TGTTTATGTTGATATTTTAT+GGG + chr8_2:41859399-41859418 Msa1248220:intron 15.0%
!!! AATATCTCTGTTTAATTTAA+TGG + chr8_2:41859481-41859500 Msa1248220:intron 15.0%
!! ATAAAACAAGAAAAACATAA+AGG + chr8_2:41859537-41859556 Msa1248220:intron 15.0%
!!! GTAAAATTAACACAAATTTT+AGG - chr8_2:41859601-41859620 None:intergenic 15.0%
!!! GAAATTAATTTCTAGTTTTA+GGG - chr8_2:41859731-41859750 None:intergenic 15.0%
!!! TGAAATTAATTTCTAGTTTT+AGG - chr8_2:41859732-41859751 None:intergenic 15.0%
!! TTAAAATGAATACATATTTG+AGG + chr8_2:41859779-41859798 Msa1248220:intron 15.0%
!!! AAATATTTTCACAAAGTAAT+TGG + chr8_2:41859815-41859834 Msa1248220:intron 15.0%
!!! AATATTTTCACAAAGTAATT+GGG + chr8_2:41859816-41859835 Msa1248220:intron 15.0%
!!! ATTCATAAATCTTTGAAAAT+AGG - chr8_2:41859978-41859997 None:intergenic 15.0%
!! AATATATGAATTGTAAACAT+AGG - chr8_2:41860567-41860586 None:intergenic 15.0%
!! ATAGTTAATAATATTGGTAG+TGG - chr8_2:41851923-41851942 None:intergenic 20.0%
!! ACTACCAATATTATTAACTA+TGG + chr8_2:41851922-41851941 Msa1248220:CDS 20.0%
!! AGAACCATAGTTAATAATAT+TGG - chr8_2:41851929-41851948 None:intergenic 20.0%
!!! TATATATCAACTTTTTGGAT+TGG + chr8_2:41852105-41852124 Msa1248220:intron 20.0%
!! GGAAATAGTAAAAATGTTAA+AGG + chr8_2:41852196-41852215 Msa1248220:intron 20.0%
!!! TTTGTGACTTTCTTTTTTAT+GGG - chr8_2:41852557-41852576 None:intergenic 20.0%
!! ATAAAAAGGGAAAATAAGTA+AGG - chr8_2:41852639-41852658 None:intergenic 20.0%
!!! GATAGATATATTTTAGTGTT+TGG + chr8_2:41852669-41852688 Msa1248220:intron 20.0%
!! TGTTTATAAGATTAGATCAA+GGG + chr8_2:41852747-41852766 Msa1248220:CDS 20.0%
!! GAAAATAAAACCATGATATA+GGG - chr8_2:41853761-41853780 None:intergenic 20.0%
!! AGAAAATAAAACCATGATAT+AGG - chr8_2:41853762-41853781 None:intergenic 20.0%
!!! CATGGTTTTATTTTCTTTTA+TGG + chr8_2:41853766-41853785 Msa1248220:intron 20.0%
!! ATATAGAAATAGGAAACAAT+TGG - chr8_2:41853836-41853855 None:intergenic 20.0%
!! TGAAAGCAATATATAGAAAT+AGG - chr8_2:41853846-41853865 None:intergenic 20.0%
!! CGATTTGAAAAATAACAATA+TGG + chr8_2:41853978-41853997 Msa1248220:intron 20.0%
!! TTAAAATTCGAATTAATGTC+AGG - chr8_2:41854042-41854061 None:intergenic 20.0%
!!! AGAAACAGCTAAAAATATTT+TGG + chr8_2:41854446-41854465 Msa1248220:CDS 20.0%
!! AAATTCATGGTTAAATAACA+AGG + chr8_2:41855104-41855123 Msa1248220:CDS 20.0%
!! AATTCATGGTTAAATAACAA+GGG + chr8_2:41855105-41855124 Msa1248220:CDS 20.0%
!! TGAAATAATGAGATCTTTAA+GGG - chr8_2:41855700-41855719 None:intergenic 20.0%
!! ATGAAATAATGAGATCTTTA+AGG - chr8_2:41855701-41855720 None:intergenic 20.0%
!! TCTTGTATCTAAATATTTGA+AGG - chr8_2:41855911-41855930 None:intergenic 20.0%
!!! TAACTGTTATTTTATATCTC+AGG + chr8_2:41856075-41856094 Msa1248220:intron 20.0%
!!! TGTTGATGACAATATAAAAA+AGG - chr8_2:41856335-41856354 None:intergenic 20.0%
!! AATATTCTTTCTTCTATACA+GGG + chr8_2:41856763-41856782 Msa1248220:intron 20.0%
!!! ATTCATATTTTGTTTAGTCT+TGG + chr8_2:41857013-41857032 Msa1248220:intron 20.0%
!! GCTGAAATTAAGTAAATAAA+TGG + chr8_2:41857451-41857470 Msa1248220:intron 20.0%
!! TAAATAAATGGATCAAACAA+TGG + chr8_2:41857463-41857482 Msa1248220:intron 20.0%
!!! AATATTTTAGATGATACCTT+TGG + chr8_2:41857783-41857802 Msa1248220:intron 20.0%
!!! TTTCTAGTAAAAAGCAAAAA+TGG - chr8_2:41858609-41858628 None:intergenic 20.0%
!!! TTACTAAGCTTTTTTTGAAA+GGG - chr8_2:41858825-41858844 None:intergenic 20.0%
!!! ATTACTAAGCTTTTTTTGAA+AGG - chr8_2:41858826-41858845 None:intergenic 20.0%
!!! ATTGGAATAATTCTTTTTGA+TGG + chr8_2:41858851-41858870 Msa1248220:intron 20.0%
!!! TCTTTTGTATTTTCTTTTGA+AGG + chr8_2:41859170-41859189 Msa1248220:intron 20.0%
!!! CTTTTGTATTTTCTTTTGAA+GGG + chr8_2:41859171-41859190 Msa1248220:intron 20.0%
!!! TTTTATAGTGAGAAAAAATG+TGG - chr8_2:41859281-41859300 None:intergenic 20.0%
!!! GTGTTTATGTTGATATTTTA+TGG + chr8_2:41859398-41859417 Msa1248220:intron 20.0%
!!! AAAATGTTTTCACAAAGTAA+AGG - chr8_2:41859566-41859585 None:intergenic 20.0%
!!! AATGATGAAAACAATTCTTT+TGG - chr8_2:41859693-41859712 None:intergenic 20.0%
!!! ATATTTTCACAAAGTAATTG+GGG + chr8_2:41859817-41859836 Msa1248220:intron 20.0%
!!! ATTATTTTCTCATATCAAGT+AGG - chr8_2:41859890-41859909 None:intergenic 20.0%
!! TTAAAATTACCAAATCAGAA+AGG + chr8_2:41860150-41860169 Msa1248220:CDS 20.0%
!! TAAAATTACCAAATCAGAAA+GGG + chr8_2:41860151-41860170 Msa1248220:CDS 20.0%
!!! AGATATACAAGATTTTCTAA+AGG - chr8_2:41860352-41860371 None:intergenic 20.0%
!!! AGTTTCAAATATTGATTTGA+AGG - chr8_2:41860528-41860547 None:intergenic 20.0%
!! TCAATTACTTCAAAAGTTTA+TGG - chr8_2:41860648-41860667 None:intergenic 20.0%
!!! TAAACTTTTGAAGTAATTGA+TGG + chr8_2:41860648-41860667 Msa1248220:three_prime_UTR 20.0%
!!! AAACTTTTGAAGTAATTGAT+GGG + chr8_2:41860649-41860668 Msa1248220:three_prime_UTR 20.0%
!! GTAGCAAAAGTTTCAAATTT+TGG - chr8_2:41851994-41852013 None:intergenic 25.0%
! GTATAAATGTGGTAAAAGTT+TGG + chr8_2:41852278-41852297 Msa1248220:intron 25.0%
!!! CTTTGTGACTTTCTTTTTTA+TGG - chr8_2:41852558-41852577 None:intergenic 25.0%
!!! ATCTTTTCTCCTTACTTTTT+TGG + chr8_2:41852594-41852613 Msa1248220:intron 25.0%
! GTGTTTATAAGATTAGATCA+AGG + chr8_2:41852746-41852765 Msa1248220:CDS 25.0%
! TTGAATCGGAAGAAAAAAAA+CGG + chr8_2:41852916-41852935 Msa1248220:intron 25.0%
! AAGTTGACAAAAAAAATAGC+CGG + chr8_2:41852950-41852969 Msa1248220:intron 25.0%
! AAGTTTAGGTAATGATTCAT+TGG + chr8_2:41852979-41852998 Msa1248220:intron 25.0%
! AAACTATTGTCTACCTTTAT+AGG - chr8_2:41853230-41853249 None:intergenic 25.0%
! TCATACTTAAACATTCTACA+TGG - chr8_2:41853296-41853315 None:intergenic 25.0%
! AAGTATGAAGTGAAAATTTC+AGG + chr8_2:41853308-41853327 Msa1248220:intron 25.0%
!! AGCGATTAATTTTGTTCTTA+AGG + chr8_2:41853431-41853450 Msa1248220:CDS 25.0%
! AATTTAATTGGACCTAAAAC+AGG + chr8_2:41853647-41853666 Msa1248220:CDS 25.0%
! CTCATTAAATAAATGTTGTG+AGG - chr8_2:41854196-41854215 None:intergenic 25.0%
! TTTCAACTCTATTGTTTCAT+TGG + chr8_2:41854650-41854669 Msa1248220:intron 25.0%
! ATATAAAAGAGGAAGATAGA+AGG - chr8_2:41854766-41854785 None:intergenic 25.0%
! CAAGTTCAGTAATATAAAAG+AGG - chr8_2:41854777-41854796 None:intergenic 25.0%
!! AATCAATGAAATAAGGCATT+TGG + chr8_2:41855257-41855276 Msa1248220:CDS 25.0%
! TCTTTCAATTTCTTGAAGAA+TGG - chr8_2:41855340-41855359 None:intergenic 25.0%
! AATCATACATCTTTGCAAAT+AGG + chr8_2:41856040-41856059 Msa1248220:intron 25.0%
!!! GTTATTTTATATCTCAGGTA+TGG + chr8_2:41856080-41856099 Msa1248220:intron 25.0%
! GTGAAAGAATTTCATAAAGT+TGG + chr8_2:41856128-41856147 Msa1248220:CDS 25.0%
! ATCAGAATAAGAATGGTATT+TGG + chr8_2:41856198-41856217 Msa1248220:CDS 25.0%
!! AATGGTATTTGGAACATATT+TGG + chr8_2:41856209-41856228 Msa1248220:CDS 25.0%
!!! ATTTTCAGGTTTGTTTTTGA+GGG + chr8_2:41856279-41856298 Msa1248220:intron 25.0%
! GAATATTCTTTCTTCTATAC+AGG + chr8_2:41856762-41856781 Msa1248220:intron 25.0%
! ATATTCTTTCTTCTATACAG+GGG + chr8_2:41856764-41856783 Msa1248220:intron 25.0%
! TGAGAAACGATATTAAAGAA+TGG + chr8_2:41856854-41856873 Msa1248220:CDS 25.0%
! ATATTAAAGAATGGTTATGC+TGG + chr8_2:41856863-41856882 Msa1248220:CDS 25.0%
! GACTAATGAAATTGAGAATT+TGG - chr8_2:41856903-41856922 None:intergenic 25.0%
!! TTTCAATTGACACAACATTT+TGG - chr8_2:41856925-41856944 None:intergenic 25.0%
! GTTAAAAAAAGACAGAAAGT+GGG - chr8_2:41857109-41857128 None:intergenic 25.0%
!! TAATGGATATGCATGAATAT+TGG - chr8_2:41857658-41857677 None:intergenic 25.0%
! TGAAATGAAGGAAAATAATG+AGG - chr8_2:41857692-41857711 None:intergenic 25.0%
! GTTATCGTATTACAAATTAC+AGG + chr8_2:41857810-41857829 Msa1248220:intron 25.0%
! ATTGTAAACAAAGTCCAATA+TGG - chr8_2:41858263-41858282 None:intergenic 25.0%
! ATTGTAACTTCACTGTTATT+GGG - chr8_2:41858338-41858357 None:intergenic 25.0%
!!! ATTTTTAAGTATCCTTAGAG+AGG - chr8_2:41858561-41858580 None:intergenic 25.0%
! GATGACATTTCATTTGAATT+TGG + chr8_2:41858654-41858673 Msa1248220:intron 25.0%
!! GTGGTTTTCTATAAAAGTAA+CGG - chr8_2:41858773-41858792 None:intergenic 25.0%
!!! TACTAAGCTTTTTTTGAAAG+GGG - chr8_2:41858824-41858843 None:intergenic 25.0%
! TAAAACTTGAGATTCTGATT+TGG + chr8_2:41858911-41858930 Msa1248220:intron 25.0%
! TTATGTAAGTAGTAGTTGAA+AGG + chr8_2:41859033-41859052 Msa1248220:intron 25.0%
! TATGTAAGTAGTAGTTGAAA+GGG + chr8_2:41859034-41859053 Msa1248220:intron 25.0%
! GCATCAAAACAGTATTTAAA+TGG - chr8_2:41859132-41859151 None:intergenic 25.0%
! TCTCACTATAAAACTGAAAT+AGG + chr8_2:41859288-41859307 Msa1248220:CDS 25.0%
! CTCACTATAAAACTGAAATA+GGG + chr8_2:41859289-41859308 Msa1248220:CDS 25.0%
! TCACTATAAAACTGAAATAG+GGG + chr8_2:41859290-41859309 Msa1248220:CDS 25.0%
!! TTATGTTGATATTTTATGGG+TGG + chr8_2:41859402-41859421 Msa1248220:intron 25.0%
!! CTCTGTTTAATTTAATGGTT+TGG + chr8_2:41859486-41859505 Msa1248220:intron 25.0%
!!! TATTCATTTTAACTGACTGA+TGG - chr8_2:41859771-41859790 None:intergenic 25.0%
! TAACACCAAGGAAAAAATTT+AGG - chr8_2:41859843-41859862 None:intergenic 25.0%
!!! AAATTTTTTCCTTGGTGTTA+TGG + chr8_2:41859843-41859862 Msa1248220:intron 25.0%
! GAAAAAATTGCTATGAAGAT+CGG + chr8_2:41860197-41860216 Msa1248220:CDS 25.0%
! CTTATTGTATAATTGGATGA+TGG + chr8_2:41860389-41860408 Msa1248220:three_prime_UTR 25.0%
!! CAAAAAGTGTATTGAACAAT+TGG + chr8_2:41860605-41860624 Msa1248220:three_prime_UTR 25.0%
! CTTAGTATTAGCTTCTAAGA+AGG - chr8_2:41851710-41851729 None:intergenic 30.0%
AGCTAATACTAAGAAGCAAA+AGG + chr8_2:41851717-41851736 Msa1248220:five_prime_UTR 30.0%
! GATAGTTTGAAATTGAAGAG+TGG - chr8_2:41851838-41851857 None:intergenic 30.0%
!! TTTTGGAGAGAGAAACTTAT+GGG - chr8_2:41851977-41851996 None:intergenic 30.0%
!! ATTTTGGAGAGAGAAACTTA+TGG - chr8_2:41851978-41851997 None:intergenic 30.0%
AGAAGATTGAATCTGTTGAA+GGG - chr8_2:41852028-41852047 None:intergenic 30.0%
!! TTGGATTGGAACATTGTTTT+TGG + chr8_2:41852119-41852138 Msa1248220:intron 30.0%
!! TTGGTTTGTAGAGAATATTC+TGG + chr8_2:41852138-41852157 Msa1248220:intron 30.0%
AAAAGCTGAAATTGTTAGAC+CGG - chr8_2:41852400-41852419 None:intergenic 30.0%
!!! TTTCTCCTTACTTTTTTGGA+AGG + chr8_2:41852598-41852617 Msa1248220:intron 30.0%
!!! TTCTCCTTACTTTTTTGGAA+GGG + chr8_2:41852599-41852618 Msa1248220:intron 30.0%
AAAACCCTTCCAAAAAAGTA+AGG - chr8_2:41852606-41852625 None:intergenic 30.0%
!! ATTTTAGTGTTTGGCATTGA+TGG + chr8_2:41852678-41852697 Msa1248220:intron 30.0%
TTACTTGAAATGTAATCTGC+AGG + chr8_2:41852712-41852731 Msa1248220:intron 30.0%
AGGGAATGATTTGAAGAATT+CGG + chr8_2:41852766-41852785 Msa1248220:CDS 30.0%
! TGGAAGGTACATGTTAAATA+AGG + chr8_2:41852859-41852878 Msa1248220:intron 30.0%
CATATCGAGATTCATTGAAT+CGG + chr8_2:41852902-41852921 Msa1248220:intron 30.0%
AGTTGACAAAAAAAATAGCC+GGG + chr8_2:41852951-41852970 Msa1248220:intron 30.0%
TTTGTAACAGGATAAACACT+AGG + chr8_2:41853070-41853089 Msa1248220:intron 30.0%
TTGTAACAGGATAAACACTA+GGG + chr8_2:41853071-41853090 Msa1248220:intron 30.0%
! GATGATGATGATTTCTTCAA+AGG - chr8_2:41853351-41853370 None:intergenic 30.0%
ATGTCTATACAGTTAGCAAT+TGG + chr8_2:41853457-41853476 Msa1248220:intron 30.0%
AAGGAGGATGCTAATTTAAT+TGG + chr8_2:41853635-41853654 Msa1248220:CDS 30.0%
AGTGATTTCAAAATCACCTT+GGG - chr8_2:41853684-41853703 None:intergenic 30.0%
CTTAAATTTGCCCTATATCA+TGG + chr8_2:41853748-41853767 Msa1248220:intron 30.0%
TGTGAGATAGAATGTATCAT+AGG - chr8_2:41853810-41853829 None:intergenic 30.0%
!!! TTTGCTGCACTAGTTTTTAA+TGG - chr8_2:41853905-41853924 None:intergenic 30.0%
! GTCAGAAAAAGAAATTTGCT+TGG + chr8_2:41854014-41854033 Msa1248220:intron 30.0%
! TCACTATTCCAAGCTTTTAT+CGG - chr8_2:41854072-41854091 None:intergenic 30.0%
TTGAAAATTGAGAAGACAGA+TGG - chr8_2:41854096-41854115 None:intergenic 30.0%
! TGCTTGACTATTTTCCTTTT+TGG - chr8_2:41854346-41854365 None:intergenic 30.0%
! AGGTGATATTTTCCTTCATT+GGG + chr8_2:41854488-41854507 Msa1248220:CDS 30.0%
TAGAGATGATTCAAGAAGTT+GGG + chr8_2:41854518-41854537 Msa1248220:CDS 30.0%
TCTTTATATGCTACAGTTTG+TGG - chr8_2:41854567-41854586 None:intergenic 30.0%
TAGCATATAAAGACACAGTT+TGG + chr8_2:41854574-41854593 Msa1248220:CDS 30.0%
! GAATCAGATCTAGAATCTTA+TGG - chr8_2:41854692-41854711 None:intergenic 30.0%
AAGTTCAGTACAAATCTCTT+TGG + chr8_2:41855038-41855057 Msa1248220:CDS 30.0%
AGTTCAGTACAAATCTCTTT+GGG + chr8_2:41855039-41855058 Msa1248220:CDS 30.0%
TCTTCAAGAAATTGAAAGAC+TGG + chr8_2:41855341-41855360 Msa1248220:CDS 30.0%
!! TGAGGTTCTAAAGATACTAT+AGG - chr8_2:41855376-41855395 None:intergenic 30.0%
ATTGTATGCCAAGGTTTAAT+TGG + chr8_2:41855504-41855523 Msa1248220:intron 30.0%
TTGTATGCCAAGGTTTAATT+GGG + chr8_2:41855505-41855524 Msa1248220:intron 30.0%
AATTGGGAGTCTAATAAATC+TGG + chr8_2:41855521-41855540 Msa1248220:CDS 30.0%
AGTCTAATAAATCTGGAAGA+TGG + chr8_2:41855528-41855547 Msa1248220:CDS 30.0%
GAATCAATGATAATACCATC+AGG - chr8_2:41855959-41855978 None:intergenic 30.0%
CAAAAACAAACCTGAAAATG+TGG - chr8_2:41856278-41856297 None:intergenic 30.0%
!!! CATTTTCAGGTTTGTTTTTG+AGG + chr8_2:41856278-41856297 Msa1248220:intron 30.0%
!! ACATATCTAGTTCCTTTTTG+TGG + chr8_2:41856352-41856371 Msa1248220:intron 30.0%
! AAAACTCATCACACATTTTC+AGG + chr8_2:41856454-41856473 Msa1248220:intron 30.0%
ACAACATAGAATGATATGCT+AGG - chr8_2:41856600-41856619 None:intergenic 30.0%
!! TTGTTTAGTCTTGGTTTCAT+TGG + chr8_2:41857022-41857041 Msa1248220:intron 30.0%
CGTTAAAAAAAGACAGAAAG+TGG - chr8_2:41857110-41857129 None:intergenic 30.0%
! TTTTCACTTCACTAACTCTA+TGG + chr8_2:41857153-41857172 Msa1248220:intron 30.0%
!! AATTTCAGCTTCTGAAATCA+GGG - chr8_2:41857440-41857459 None:intergenic 30.0%
!! TAATTTCAGCTTCTGAAATC+AGG - chr8_2:41857441-41857460 None:intergenic 30.0%
ATGGAAAGAAAAACTGTAGA+AGG + chr8_2:41857482-41857501 Msa1248220:intron 30.0%
TGGAAAGAAAAACTGTAGAA+GGG + chr8_2:41857483-41857502 Msa1248220:intron 30.0%
GCTACAATTACATGAAATGA+AGG - chr8_2:41857704-41857723 None:intergenic 30.0%
ATACAATGAAAACACTGTGT+AGG - chr8_2:41857758-41857777 None:intergenic 30.0%
TAATACGATAACTACTCCAA+AGG - chr8_2:41857802-41857821 None:intergenic 30.0%
! TTTCTTCTCTGAAAATGACA+CGG - chr8_2:41857856-41857875 None:intergenic 30.0%
!! GTCATTTTCAGAGAAGAAAT+TGG + chr8_2:41857857-41857876 Msa1248220:intron 30.0%
AGAGAAGAAATTGGATATGA+TGG + chr8_2:41857866-41857885 Msa1248220:intron 30.0%
! AAGAAATTGGATATGATGGA+TGG + chr8_2:41857870-41857889 Msa1248220:CDS 30.0%
TTCACCATATGTATAACTGA+GGG - chr8_2:41857990-41858009 None:intergenic 30.0%
TTTCACCATATGTATAACTG+AGG - chr8_2:41857991-41858010 None:intergenic 30.0%
CAGTTATACATATGGTGAAA+TGG + chr8_2:41857991-41858010 Msa1248220:CDS 30.0%
CATTTGATGTTACAACCAAA+GGG + chr8_2:41858083-41858102 Msa1248220:CDS 30.0%
TTGTAACTTCACTGTTATTG+GGG - chr8_2:41858337-41858356 None:intergenic 30.0%
CATTGTAACTTCACTGTTAT+TGG - chr8_2:41858339-41858358 None:intergenic 30.0%
AATGCTTCTAGTGAAAGAAT+TGG + chr8_2:41858361-41858380 Msa1248220:intron 30.0%
TCATGAGTTCAAATCCTATA+TGG + chr8_2:41858457-41858476 Msa1248220:intron 30.0%
CATGAGTTCAAATCCTATAT+GGG + chr8_2:41858458-41858477 Msa1248220:intron 30.0%
ATGAGTTCAAATCCTATATG+GGG + chr8_2:41858459-41858478 Msa1248220:intron 30.0%
CAAATGAAATGTCATCTAGT+AGG - chr8_2:41858650-41858669 None:intergenic 30.0%
! AGAATCTCAAGTTTTACTTG+TGG - chr8_2:41858907-41858926 None:intergenic 30.0%
TCACTCTTATAAGTGTTCAT+TGG + chr8_2:41859070-41859089 Msa1248220:intron 30.0%
TCAACATAAACACTACTAAG+TGG - chr8_2:41859391-41859410 None:intergenic 30.0%
! ATGTTTTCACAAAGTAAAGG+AGG - chr8_2:41859563-41859582 None:intergenic 30.0%
!! TTCTCGTTTTCACTATTTCT+TGG + chr8_2:41860018-41860037 Msa1248220:intron 30.0%
AGATGGTCAATTATTTGCAT+TGG + chr8_2:41860092-41860111 Msa1248220:intron 30.0%
CCTTGAACATGAAAATAGAA+AGG - chr8_2:41860130-41860149 None:intergenic 30.0%
! CCTTTCTATTTTCATGTTCA+AGG + chr8_2:41860127-41860146 Msa1248220:intron 30.0%
TATACAATAAGCCTATGGTA+AGG - chr8_2:41860380-41860399 None:intergenic 30.0%
CCAATTATACAATAAGCCTA+TGG - chr8_2:41860385-41860404 None:intergenic 30.0%
CCATAGGCTTATTGTATAAT+TGG + chr8_2:41860382-41860401 Msa1248220:three_prime_UTR 30.0%
!! CAGAAGTATCATTATAGAGA+AGG + chr8_2:41860453-41860472 Msa1248220:three_prime_UTR 30.0%
ACAGTATATCAGTTCTTAGA+TGG - chr8_2:41860676-41860695 None:intergenic 30.0%
TGTAACATCTTCCTTGCAAA+AGG + chr8_2:41851759-41851778 Msa1248220:five_prime_UTR 35.0%
!! ATTTGGCTTGAAACGGTTAA+TGG - chr8_2:41851881-41851900 None:intergenic 35.0%
!! GTGAAGAATTTGGCTTGAAA+CGG - chr8_2:41851888-41851907 None:intergenic 35.0%
ACTATGGTTCTTCTTGTTCT+TGG + chr8_2:41851938-41851957 Msa1248220:CDS 35.0%
TTTGGAGAGAGAAACTTATG+GGG - chr8_2:41851976-41851995 None:intergenic 35.0%
CAGAAGATTGAATCTGTTGA+AGG - chr8_2:41852029-41852048 None:intergenic 35.0%
ACCAGTTCAATTCTGTTGAT+GGG - chr8_2:41852078-41852097 None:intergenic 35.0%
TACCAGTTCAATTCTGTTGA+TGG - chr8_2:41852079-41852098 None:intergenic 35.0%
! GTAAAAATGTTAAAGGGCGT+TGG + chr8_2:41852203-41852222 Msa1248220:intron 35.0%
CTTGTGTGTGACTATTCAAT+TGG - chr8_2:41852345-41852364 None:intergenic 35.0%
ATTGAATAGTCACACACAAG+TGG + chr8_2:41852345-41852364 Msa1248220:intron 35.0%
TTGAATAGTCACACACAAGT+GGG + chr8_2:41852346-41852365 Msa1248220:intron 35.0%
AAGAATTCGGAGCTTATAGT+TGG + chr8_2:41852779-41852798 Msa1248220:CDS 35.0%
! AGGAAAATGGATTCTCCATT+GGG + chr8_2:41852814-41852833 Msa1248220:CDS 35.0%
ATTACCTAAACTTAGTGACC+CGG - chr8_2:41852972-41852991 None:intergenic 35.0%
TACACTGTAAGCATCTTCAT+TGG - chr8_2:41853145-41853164 None:intergenic 35.0%
AGTGTAAATCTTGATTGTGC+AGG + chr8_2:41853159-41853178 Msa1248220:intron 35.0%
GTGTAAATCTTGATTGTGCA+GGG + chr8_2:41853160-41853179 Msa1248220:intron 35.0%
TTTATAGGAATAGATCCAGG+AGG - chr8_2:41853215-41853234 None:intergenic 35.0%
TCCTGGATCTATTCCTATAA+AGG + chr8_2:41853214-41853233 Msa1248220:CDS 35.0%
ACCTTTATAGGAATAGATCC+AGG - chr8_2:41853218-41853237 None:intergenic 35.0%
GAAGAAATCATCATCATCAC+CGG + chr8_2:41853353-41853372 Msa1248220:CDS 35.0%
!! TCATAAAGAGTATCTCCTTC+CGG - chr8_2:41853375-41853394 None:intergenic 35.0%
GAGATACTCTTTATGAAGTC+AGG + chr8_2:41853379-41853398 Msa1248220:CDS 35.0%
ACTCTTTATGAAGTCAGGAT+CGG + chr8_2:41853384-41853403 Msa1248220:CDS 35.0%
! TTTTTCCCTCCATTCCAATT+TGG + chr8_2:41853525-41853544 Msa1248220:intron 35.0%
! TTTTCCCTCCATTCCAATTT+GGG + chr8_2:41853526-41853545 Msa1248220:intron 35.0%
TCCTCTGGTAAACTATCTTA+AGG + chr8_2:41853616-41853635 Msa1248220:CDS 35.0%
TCCTTAAGATAGTTTACCAG+AGG - chr8_2:41853620-41853639 None:intergenic 35.0%
TCTGGTAAACTATCTTAAGG+AGG + chr8_2:41853619-41853638 Msa1248220:CDS 35.0%
! GACAAACTAAAGCCTGTTTT+AGG - chr8_2:41853662-41853681 None:intergenic 35.0%
CAGTGATTTCAAAATCACCT+TGG - chr8_2:41853685-41853704 None:intergenic 35.0%
AAACTAGTGCAGCAAAGAAA+AGG + chr8_2:41853909-41853928 Msa1248220:intron 35.0%
TGATCTGACTTACATTTCAC+TGG + chr8_2:41854218-41854237 Msa1248220:CDS 35.0%
GCTATCTTGAACTTTGTCAT+CGG - chr8_2:41854305-41854324 None:intergenic 35.0%
TCAAGATAGCAACAGTGAAT+CGG + chr8_2:41854315-41854334 Msa1248220:intron 35.0%
GTGAATCGGAAAATCCAAAA+AGG + chr8_2:41854329-41854348 Msa1248220:intron 35.0%
AAGGAAAATAGTCAAGCAGA+AGG + chr8_2:41854348-41854367 Msa1248220:intron 35.0%
ACAGTAACTTCCTTGGTTAA+AGG - chr8_2:41854390-41854409 None:intergenic 35.0%
GTTATTGACAGTAACTTCCT+TGG - chr8_2:41854397-41854416 None:intergenic 35.0%
! TGTTTCTGAGCATTTCCTAA+CGG - chr8_2:41854433-41854452 None:intergenic 35.0%
GATTTAGAAACGGATATACC+AGG + chr8_2:41854468-41854487 Msa1248220:CDS 35.0%
CAATGAAGGAAAATATCACC+TGG - chr8_2:41854489-41854508 None:intergenic 35.0%
! CAGGTGATATTTTCCTTCAT+TGG + chr8_2:41854487-41854506 Msa1248220:CDS 35.0%
! GGTGATATTTTCCTTCATTG+GGG + chr8_2:41854489-41854508 Msa1248220:CDS 35.0%
GTAGAGATGATTCAAGAAGT+TGG + chr8_2:41854517-41854536 Msa1248220:CDS 35.0%
TTATATGCTACAGTTTGTGG+TGG - chr8_2:41854564-41854583 None:intergenic 35.0%
AGTTTGGCGAACTCAATTAA+AGG + chr8_2:41854590-41854609 Msa1248220:CDS 35.0%
!! CTTTTGGCTACATAACAGAT+CGG - chr8_2:41855005-41855024 None:intergenic 35.0%
!! TCTTTGGGAGAAGAATTTTC+AGG + chr8_2:41855054-41855073 Msa1248220:CDS 35.0%
GAAAGTTGTAAAGAGTGAAG+AGG + chr8_2:41855194-41855213 Msa1248220:CDS 35.0%
! GAAATAAGGCATTTGGTTAC+TGG + chr8_2:41855264-41855283 Msa1248220:CDS 35.0%
AATGGTTTCTTGAGCTTCTT+TGG - chr8_2:41855322-41855341 None:intergenic 35.0%
AAAGATACTATAGGCTTCAG+CGG - chr8_2:41855367-41855386 None:intergenic 35.0%
!!! ATTATTTTTGGAGGCAACTC+AGG - chr8_2:41855459-41855478 None:intergenic 35.0%
GTTGCCTCCAAAAATAATGT+CGG + chr8_2:41855461-41855480 Msa1248220:CDS 35.0%
TTGCCTCCAAAAATAATGTC+GGG + chr8_2:41855462-41855481 Msa1248220:CDS 35.0%
TTAGACTCCCAATTAAACCT+TGG - chr8_2:41855515-41855534 None:intergenic 35.0%
TAAATCTGGAAGATGGTACA+TGG + chr8_2:41855535-41855554 Msa1248220:CDS 35.0%
!! CTCTTGGCTTTACTGTTATT+TGG + chr8_2:41855588-41855607 Msa1248220:CDS 35.0%
TTGTTTATGTCTACGAAGCA+CGG + chr8_2:41855723-41855742 Msa1248220:intron 35.0%
TAGATACAAGACCATGTGTT+AGG + chr8_2:41855920-41855939 Msa1248220:intron 35.0%
GTGGTGATTTATAAGAGAGT+AGG + chr8_2:41856007-41856026 Msa1248220:intron 35.0%
! AAAGTTGGAATCAAAGTGCT+AGG + chr8_2:41856143-41856162 Msa1248220:CDS 35.0%
ACCATTCTTATTCTGATGCT+CGG - chr8_2:41856195-41856214 None:intergenic 35.0%
! GGTATTTGGAACATATTTGG+AGG + chr8_2:41856212-41856231 Msa1248220:CDS 35.0%
ATGGATCTTCAACCACAAAA+AGG - chr8_2:41856367-41856386 None:intergenic 35.0%
! TTTTTGTGGTTGAAGATCCA+TGG + chr8_2:41856366-41856385 Msa1248220:intron 35.0%
AAGTGTATAACCGAAATCCA+TGG - chr8_2:41856386-41856405 None:intergenic 35.0%
TGTTTCCCTAGTAAATAACG+TGG + chr8_2:41856506-41856525 Msa1248220:intron 35.0%
GTACTCCACGTTATTTACTA+GGG - chr8_2:41856514-41856533 None:intergenic 35.0%
TGTACTCCACGTTATTTACT+AGG - chr8_2:41856515-41856534 None:intergenic 35.0%
TATGATACTGCTGTCTTTCT+AGG + chr8_2:41856715-41856734 Msa1248220:intron 35.0%
TCCAAACATTGATCATTCAC+AGG + chr8_2:41856825-41856844 Msa1248220:CDS 35.0%
TCCTGTGAATGATCAATGTT+TGG - chr8_2:41856829-41856848 None:intergenic 35.0%
! AAGAATGGTTATGCTGGTTA+AGG + chr8_2:41856869-41856888 Msa1248220:CDS 35.0%
CTTGGTTTCATTGGAAATGT+TGG + chr8_2:41857031-41857050 Msa1248220:CDS 35.0%
GAAATGTTGGAGAATTGAGA+TGG + chr8_2:41857044-41857063 Msa1248220:CDS 35.0%
!! AAATTGGATATGATGGATGG+AGG + chr8_2:41857873-41857892 Msa1248220:CDS 35.0%
! TTGACTTTGTCAGAGGATTT+TGG + chr8_2:41857897-41857916 Msa1248220:CDS 35.0%
! TGACTTTGTCAGAGGATTTT+GGG + chr8_2:41857898-41857917 Msa1248220:CDS 35.0%
!!! ATTTTGGGGTGGTTATGTAA+AGG + chr8_2:41857913-41857932 Msa1248220:CDS 35.0%
TGGTTATGTAAAGGACTACA+TGG + chr8_2:41857922-41857941 Msa1248220:CDS 35.0%
GATTCCCTCAGTTATACATA+TGG + chr8_2:41857983-41858002 Msa1248220:CDS 35.0%
ATCATAATCAAGATGCACAC+AGG + chr8_2:41858014-41858033 Msa1248220:CDS 35.0%
GCATTTGATGTTACAACCAA+AGG + chr8_2:41858082-41858101 Msa1248220:CDS 35.0%
! TACTAGTTTCACCACCATAT+TGG + chr8_2:41858246-41858265 Msa1248220:intron 35.0%
GTAAACAAAGTCCAATATGG+TGG - chr8_2:41858260-41858279 None:intergenic 35.0%
! ATTTTACATCTGCCCCATAT+AGG - chr8_2:41858474-41858493 None:intergenic 35.0%
CGTTGGAAAGATGTGAATAT+TGG + chr8_2:41858689-41858708 Msa1248220:CDS 35.0%
TTTATAGAAAACCACGACAC+TGG + chr8_2:41858778-41858797 Msa1248220:CDS 35.0%
GTGGCATTGTTCAAAACAAA+AGG - chr8_2:41858888-41858907 None:intergenic 35.0%
!! ATTTTCTTTTGAAGGGTCAC+TGG + chr8_2:41859178-41859197 Msa1248220:intron 35.0%
ATATGGTTTCCATAACACCA+AGG - chr8_2:41859855-41859874 None:intergenic 35.0%
!!! ACGAGAAAATGTTGTTTTCG+CGG - chr8_2:41860005-41860024 None:intergenic 35.0%
! CTCTGAAAATGTGCTTTAGA+TGG + chr8_2:41860075-41860094 Msa1248220:intron 35.0%
ATAAACGTCCCTTTCTGATT+TGG - chr8_2:41860162-41860181 None:intergenic 35.0%
!! TTCCATTTTTGGGAATCACT+AGG - chr8_2:41860242-41860261 None:intergenic 35.0%
!! CCAAGCTGATTTCCATTTTT+GGG - chr8_2:41860252-41860271 None:intergenic 35.0%
CCAAAAATGGAAATCAGCTT+GGG + chr8_2:41860250-41860269 Msa1248220:CDS 35.0%
ATATCTCATTGCCTTACCAT+AGG + chr8_2:41860366-41860385 Msa1248220:three_prime_UTR 35.0%
! TATAATTGGATGATGGTGTC+AGG + chr8_2:41860396-41860415 Msa1248220:three_prime_UTR 35.0%
ATTATAGAGAAGGTTGCAGA+GGG + chr8_2:41860463-41860482 Msa1248220:three_prime_UTR 35.0%
GGTTAATGGTAGCTAATCTG+TGG - chr8_2:41851867-41851886 None:intergenic 40.0%
! GAGAGAGAGTGTGAAGAATT+TGG - chr8_2:41851898-41851917 None:intergenic 40.0%
TCCCATCAACAGAATTGAAC+TGG + chr8_2:41852074-41852093 Msa1248220:CDS 40.0%
!!! AGGGCGTTGGATTTTTATAG+TGG + chr8_2:41852216-41852235 Msa1248220:intron 40.0%
TGAATAGTCACACACAAGTG+GGG + chr8_2:41852347-41852366 Msa1248220:intron 40.0%
CTTGAAATGTAATCTGCAGG+TGG + chr8_2:41852715-41852734 Msa1248220:intron 40.0%
AAATGTAATCTGCAGGTGGA+GGG + chr8_2:41852719-41852738 Msa1248220:intron 40.0%
ATAGTTGGATGCAATCTACC+AGG + chr8_2:41852794-41852813 Msa1248220:CDS 40.0%
GATGCAATCTACCAGGAAAA+TGG + chr8_2:41852801-41852820 Msa1248220:CDS 40.0%
! CAATGGAGAATCCATTTTCC+TGG - chr8_2:41852815-41852834 None:intergenic 40.0%
! CAGGAAAATGGATTCTCCAT+TGG + chr8_2:41852813-41852832 Msa1248220:CDS 40.0%
! GGAAAATGGATTCTCCATTG+GGG + chr8_2:41852815-41852834 Msa1248220:CDS 40.0%
!! GTTTCTGGTGTGGATGATAT+TGG + chr8_2:41852839-41852858 Msa1248220:CDS 40.0%
CGCGATTCATCGTAATGAAT+TGG + chr8_2:41853029-41853048 Msa1248220:intron 40.0%
AATCTTGATTGTGCAGGGAA+TGG + chr8_2:41853165-41853184 Msa1248220:intron 40.0%
AAATCATCATCATCACCGGA+AGG + chr8_2:41853357-41853376 Msa1248220:CDS 40.0%
ATCGCTGAAATCTCATTGCT+GGG - chr8_2:41853417-41853436 None:intergenic 40.0%
AATCGCTGAAATCTCATTGC+TGG - chr8_2:41853418-41853437 None:intergenic 40.0%
AAGAGACTTCAAAGTTCCTC+TGG + chr8_2:41853601-41853620 Msa1248220:CDS 40.0%
! ATCTTGTGCCGATAAAAGCT+TGG + chr8_2:41854061-41854080 Msa1248220:intron 40.0%
!!! ACTGGTTTTCCTCACTCATA+GGG + chr8_2:41854236-41854255 Msa1248220:CDS 40.0%
TGTAGAACTGCCTTTAACCA+AGG + chr8_2:41854377-41854396 Msa1248220:CDS 40.0%
GCGAACTCAATTAAAGGTAG+TGG + chr8_2:41854596-41854615 Msa1248220:intron 40.0%
CGATCTGTTATGTAGCCAAA+AGG + chr8_2:41855003-41855022 Msa1248220:intron 40.0%
GTTATGTAGCCAAAAGGAAG+TGG + chr8_2:41855009-41855028 Msa1248220:intron 40.0%
TAGCCAAAAGGAAGTGGAAA+GGG + chr8_2:41855015-41855034 Msa1248220:intron 40.0%
TTCGGATTCCAAAACAACCT+CGG - chr8_2:41855433-41855452 None:intergenic 40.0%
!!! GTTCCCGACATTATTTTTGG+AGG - chr8_2:41855468-41855487 None:intergenic 40.0%
! CCTGTTCCCGACATTATTTT+TGG - chr8_2:41855471-41855490 None:intergenic 40.0%
CCAAAAATAATGTCGGGAAC+AGG + chr8_2:41855468-41855487 Msa1248220:CDS 40.0%
GGGTATGAAATTGTATGCCA+AGG + chr8_2:41855495-41855514 Msa1248220:intron 40.0%
GCTAAAGAACTAGCATCTCT+TGG + chr8_2:41855572-41855591 Msa1248220:CDS 40.0%
ACTGACAGATATGTTGACAC+CGG + chr8_2:41855760-41855779 Msa1248220:intron 40.0%
!! AGACATATCGGTGTTAGACA+GGG - chr8_2:41855835-41855854 None:intergenic 40.0%
!! AAGACATATCGGTGTTAGAC+AGG - chr8_2:41855836-41855855 None:intergenic 40.0%
TGTCTAACACCGATATGTCT+TGG + chr8_2:41855835-41855854 Msa1248220:intron 40.0%
ATGGCTTCAATGTGAAGTGT+CGG + chr8_2:41855867-41855886 Msa1248220:intron 40.0%
TACGCAATTTGCCTAACACA+TGG - chr8_2:41855934-41855953 None:intergenic 40.0%
GCATGCAATGTTCAATCATG+TGG + chr8_2:41855988-41856007 Msa1248220:intron 40.0%
TGGTACCATTGATGAACTGA+AGG + chr8_2:41856100-41856119 Msa1248220:CDS 40.0%
CACATCCTTCAGTTCATCAA+TGG - chr8_2:41856108-41856127 None:intergenic 40.0%
CATTGATGAACTGAAGGATG+TGG + chr8_2:41856106-41856125 Msa1248220:CDS 40.0%
! AGCTGATGATCCACATTTTC+AGG + chr8_2:41856265-41856284 Msa1248220:CDS 40.0%
GGTTGAAGATCCATGGATTT+CGG + chr8_2:41856373-41856392 Msa1248220:intron 40.0%
TATCAAACGTTCTCAGTCAC+TGG - chr8_2:41856425-41856444 None:intergenic 40.0%
TAGTGGAGATAGTTTCCATG+CGG + chr8_2:41856801-41856820 Msa1248220:CDS 40.0%
TGGAGAATTGAGATGGTATC+TGG + chr8_2:41857051-41857070 Msa1248220:CDS 40.0%
GAATTGAGATGGTATCTGGT+AGG + chr8_2:41857055-41857074 Msa1248220:intron 40.0%
AGAAGCGATTGACAAAGTCT+AGG - chr8_2:41857243-41857262 None:intergenic 40.0%
AGGAAGGTTAGACAGATTCT+GGG - chr8_2:41857282-41857301 None:intergenic 40.0%
AAGGAAGGTTAGACAGATTC+TGG - chr8_2:41857283-41857302 None:intergenic 40.0%
CAGATGTGCATAAGAAAGGA+AGG - chr8_2:41857298-41857317 None:intergenic 40.0%
CTTCCTTTCTTATGCACATC+TGG + chr8_2:41857296-41857315 Msa1248220:intron 40.0%
!! AGAACGTTCTGAGACAAAGA+TGG - chr8_2:41857380-41857399 None:intergenic 40.0%
ATCTTTGTCTCAGAACGTTC+TGG + chr8_2:41857379-41857398 Msa1248220:CDS 40.0%
AATCCCAGATGCTATCTGAT+GGG + chr8_2:41857412-41857431 Msa1248220:CDS 40.0%
TTCTCTGAGTGGAGTAGATT+GGG - chr8_2:41857516-41857535 None:intergenic 40.0%
TTTCTCTGAGTGGAGTAGAT+TGG - chr8_2:41857517-41857536 None:intergenic 40.0%
! GAGTTTTCTCTTTCTCTGAG+TGG - chr8_2:41857527-41857546 None:intergenic 40.0%
CTCTCTCGGCTTAATCATAA+TGG + chr8_2:41857626-41857645 Msa1248220:intron 40.0%
GTAGCATAAGCTTCATGTTG+AGG + chr8_2:41857719-41857738 Msa1248220:intron 40.0%
! GACTTTGTCAGAGGATTTTG+GGG + chr8_2:41857899-41857918 Msa1248220:CDS 40.0%
! AACCAAACCATACTTTTGCG+TGG + chr8_2:41857949-41857968 Msa1248220:CDS 40.0%
! ACCAAACCATACTTTTGCGT+GGG + chr8_2:41857950-41857969 Msa1248220:CDS 40.0%
TCTGTGAGTACTCAACTTGA+CGG + chr8_2:41858115-41858134 Msa1248220:intron 40.0%
AAACTCACTACACCTCTCTA+AGG + chr8_2:41858546-41858565 Msa1248220:intron 40.0%
! TTTGAATTTGGCTCCTCTGT+AGG + chr8_2:41858666-41858685 Msa1248220:intron 40.0%
ATGTGAATATTGGCGCTTGT+CGG + chr8_2:41858699-41858718 Msa1248220:CDS 40.0%
ATAAAAGTAACGGCACGAGA+CGG - chr8_2:41858763-41858782 None:intergenic 40.0%
!! ACTTGAGATTCTGATTTGGC+AGG + chr8_2:41858915-41858934 Msa1248220:intron 40.0%
! TCCTTGCATTTCTTTTCCGT+GGG - chr8_2:41859211-41859230 None:intergenic 40.0%
! ATCCTTGCATTTCTTTTCCG+TGG - chr8_2:41859212-41859231 None:intergenic 40.0%
ATGTGGTCAAAGAACACTGA+CGG - chr8_2:41859264-41859283 None:intergenic 40.0%
CTCTCTATTCGGAAACGAAA+CGG + chr8_2:41859318-41859337 Msa1248220:CDS 40.0%
TCTCTATTCGGAAACGAAAC+GGG + chr8_2:41859319-41859338 Msa1248220:CDS 40.0%
! TTTGGCTGCAGCTATGTTTT+TGG + chr8_2:41859504-41859523 Msa1248220:intron 40.0%
! TTGGCTGCAGCTATGTTTTT+GGG + chr8_2:41859505-41859524 Msa1248220:intron 40.0%
!!! TGGGGCCTAAATTTTTTCCT+TGG + chr8_2:41859835-41859854 Msa1248220:intron 40.0%
TGGAAACCATATGCATGCTT+AGG + chr8_2:41859863-41859882 Msa1248220:intron 40.0%
GGAAACCATATGCATGCTTA+GGG + chr8_2:41859864-41859883 Msa1248220:intron 40.0%
!! CATTTTTGGGAATCACTAGG+TGG - chr8_2:41860239-41860258 None:intergenic 40.0%
CACCTAGTGATTCCCAAAAA+TGG + chr8_2:41860237-41860256 Msa1248220:CDS 40.0%
CCCAAAAATGGAAATCAGCT+TGG + chr8_2:41860249-41860268 Msa1248220:CDS 40.0%
!! CCCAAGCTGATTTCCATTTT+TGG - chr8_2:41860253-41860272 None:intergenic 40.0%
AAATGGAAATCAGCTTGGGA+CGG + chr8_2:41860254-41860273 Msa1248220:CDS 40.0%
ACGGAAGAGACTACAAGATT+TGG + chr8_2:41860273-41860292 Msa1248220:CDS 40.0%
CGGAAGAGACTACAAGATTT+GGG + chr8_2:41860274-41860293 Msa1248220:CDS 40.0%
CATTATAGAGAAGGTTGCAG+AGG + chr8_2:41860462-41860481 Msa1248220:three_prime_UTR 40.0%
GGTTCATTTCAGCTTAAGTC+TGG + chr8_2:41860484-41860503 Msa1248220:three_prime_UTR 40.0%
!!! TGGTGATGGTTCCTTTTGCA+AGG - chr8_2:41851773-41851792 None:intergenic 45.0%
TGGTTCAGAGAAAACAGTGG+TGG - chr8_2:41851818-41851837 None:intergenic 45.0%
GAGTGGTTCAGAGAAAACAG+TGG - chr8_2:41851821-41851840 None:intergenic 45.0%
! TTTCAGCTTTTGCCAGAGCT+AGG + chr8_2:41852409-41852428 Msa1248220:intron 45.0%
GAAATGTAATCTGCAGGTGG+AGG + chr8_2:41852718-41852737 Msa1248220:intron 45.0%
ATTCTCCATTGGGGAGTTTC+TGG + chr8_2:41852824-41852843 Msa1248220:CDS 45.0%
CTGGTGTGGATGATATTGGA+AGG + chr8_2:41852843-41852862 Msa1248220:CDS 45.0%
ATAGCCGGGTCACTAAGTTT+AGG + chr8_2:41852965-41852984 Msa1248220:intron 45.0%
ACCACCCAAATTGGAATGGA+GGG - chr8_2:41853533-41853552 None:intergenic 45.0%
CAAGACCACCCAAATTGGAA+TGG - chr8_2:41853537-41853556 None:intergenic 45.0%
ATCGACAAGACCACCCAAAT+TGG - chr8_2:41853542-41853561 None:intergenic 45.0%
GGCACTTGGTATCAACACAA+AGG + chr8_2:41853578-41853597 Msa1248220:CDS 45.0%
!! ACAGGCTTTAGTTTGTCCCA+AGG + chr8_2:41853665-41853684 Msa1248220:CDS 45.0%
GTTGTGAGGACAAAGCTGAA+AGG - chr8_2:41854182-41854201 None:intergenic 45.0%
!!! CACTGGTTTTCCTCACTCAT+AGG + chr8_2:41854235-41854254 Msa1248220:CDS 45.0%
TCCTCACTCATAGGGAACAT+AGG + chr8_2:41854244-41854263 Msa1248220:CDS 45.0%
CCTCACTCATAGGGAACATA+GGG + chr8_2:41854245-41854264 Msa1248220:CDS 45.0%
! CATCGGTTGCTTCTGAATTC+AGG - chr8_2:41854288-41854307 None:intergenic 45.0%
ACTCTATCAGTGTCTCCGTT+AGG + chr8_2:41854415-41854434 Msa1248220:CDS 45.0%
CTCTACAAACTCCCCAATGA+AGG - chr8_2:41854503-41854522 None:intergenic 45.0%
CAAAGAACACGAAGCAATGC+AGG - chr8_2:41854968-41854987 None:intergenic 45.0%
GTAGCCAAAAGGAAGTGGAA+AGG + chr8_2:41855014-41855033 Msa1248220:intron 45.0%
! CTTCCCTTTCCACTTCCTTT+TGG - chr8_2:41855021-41855040 None:intergenic 45.0%
ACTTCCGGTAGCTCAGTTAT+TGG + chr8_2:41855153-41855172 Msa1248220:CDS 45.0%
GTTGCCAATAACTGAGCTAC+CGG - chr8_2:41855160-41855179 None:intergenic 45.0%
CTCAGTTATTGGCAACAGAG+AGG + chr8_2:41855164-41855183 Msa1248220:CDS 45.0%
GTTGTAAAGAGTGAAGAGGC+AGG + chr8_2:41855198-41855217 Msa1248220:CDS 45.0%
TTTCTCCGAGGAAGCTATTG+TGG + chr8_2:41855404-41855423 Msa1248220:CDS 45.0%
GGATTCCACAATAGCTTCCT+CGG - chr8_2:41855412-41855431 None:intergenic 45.0%
! TGTGGAATCCGAGGTTGTTT+TGG + chr8_2:41855422-41855441 Msa1248220:CDS 45.0%
ATCCCTTGGCATGTATCCTT+CGG - chr8_2:41855642-41855661 None:intergenic 45.0%
GTCCAGTGTCCAAGACATAT+CGG - chr8_2:41855847-41855866 None:intergenic 45.0%
TATGTCTTGGACACTGGACA+TGG + chr8_2:41855848-41855867 Msa1248220:intron 45.0%
GCCGAGCATCAGAATAAGAA+TGG + chr8_2:41856191-41856210 Msa1248220:CDS 45.0%
TATTTGGAGGTCGTCTCAAC+TGG + chr8_2:41856225-41856244 Msa1248220:CDS 45.0%
ATTTGGAGGTCGTCTCAACT+GGG + chr8_2:41856226-41856245 Msa1248220:CDS 45.0%
TTGAGATGGTATCTGGTAGG+CGG + chr8_2:41857058-41857077 Msa1248220:intron 45.0%
! GTGAAGTGAAAAGCACAGCA+AGG - chr8_2:41857145-41857164 None:intergenic 45.0%
TGACAAAGTCTAGGAGCTTG+AGG - chr8_2:41857234-41857253 None:intergenic 45.0%
GGAAGGTTAGACAGATTCTG+GGG - chr8_2:41857281-41857300 None:intergenic 45.0%
GAGCCAGATGTGCATAAGAA+AGG - chr8_2:41857302-41857321 None:intergenic 45.0%
TGGCTCATATTCCTTTCACG+TGG + chr8_2:41857316-41857335 Msa1248220:intron 45.0%
! GTTTGATTCGTCCACGTGAA+AGG - chr8_2:41857330-41857349 None:intergenic 45.0%
!! TTCTGAGACAAAGATGGAGC+TGG - chr8_2:41857374-41857393 None:intergenic 45.0%
! CATCAGATAGCATCTGGGAT+TGG - chr8_2:41857413-41857432 None:intergenic 45.0%
CAATCCCAGATGCTATCTGA+TGG + chr8_2:41857411-41857430 Msa1248220:CDS 45.0%
GTTCCCATCAGATAGCATCT+GGG - chr8_2:41857418-41857437 None:intergenic 45.0%
ATGAGGCGAGTGAGTTGTAA+TGG - chr8_2:41857675-41857694 None:intergenic 45.0%
!! TTTGTCAGAGGATTTTGGGG+TGG + chr8_2:41857902-41857921 Msa1248220:CDS 45.0%
! TCCCACGCAAAAGTATGGTT+TGG - chr8_2:41857954-41857973 None:intergenic 45.0%
TACTCTCCCACGCAAAAGTA+TGG - chr8_2:41857959-41857978 None:intergenic 45.0%
CACAGAGTGAAGAATCCCTT+TGG - chr8_2:41858101-41858120 None:intergenic 45.0%
TCAGCACATCAGTGGTAGTT+GGG + chr8_2:41858420-41858439 Msa1248220:intron 45.0%
AATATTGGCGCTTGTCGGAT+CGG + chr8_2:41858704-41858723 Msa1248220:CDS 45.0%
!! ACACTGGTTCTACACAGGTT+TGG + chr8_2:41858794-41858813 Msa1248220:intron 45.0%
! CCTTGCATTTCTTTTCCGTG+GGG - chr8_2:41859210-41859229 None:intergenic 45.0%
GCTTATACTCTTACTCACCC+AGG + chr8_2:41859234-41859253 Msa1248220:CDS 45.0%
!! TAGGGGCACTTCTCTCTATT+CGG + chr8_2:41859307-41859326 Msa1248220:CDS 45.0%
!!! CAGCTATGTTTTTGGGTGCT+GGG + chr8_2:41859512-41859531 Msa1248220:intron 45.0%
ATTGCTATGAAGATCGGTCC+TGG + chr8_2:41860203-41860222 Msa1248220:CDS 45.0%
CTAGGTGGTTCATAATGACC+AGG - chr8_2:41860224-41860243 None:intergenic 45.0%
AGACTACAAGATTTGGGAGC+TGG + chr8_2:41860280-41860299 Msa1248220:CDS 45.0%
!!! AAATTTTACTTTTTTTTTTA+GGG - chr8_2:41854890-41854909 None:intergenic 5.0%
!!! AAAATTTTACTTTTTTTTTT+AGG - chr8_2:41854891-41854910 None:intergenic 5.0%
!! ATTTATATAATTTAAATTCT+AGG + chr8_2:41855660-41855679 Msa1248220:CDS 5.0%
!!! TTTGAAATTATTATTAATAA+AGG - chr8_2:41858511-41858530 None:intergenic 5.0%
ATGATAGGTGGTCGTGGTGA+TGG - chr8_2:41851787-41851806 None:intergenic 50.0%
ATGCTCATGATAGGTGGTCG+TGG - chr8_2:41851793-41851812 None:intergenic 50.0%
GTGGAGATGCTCATGATAGG+TGG - chr8_2:41851799-41851818 None:intergenic 50.0%
! GTGGTGGAGATGCTCATGAT+AGG - chr8_2:41851802-41851821 None:intergenic 50.0%
TGGGGATCCTATGTTCACAC+TGG + chr8_2:41852365-41852384 Msa1248220:intron 50.0%
GTCGTGACCAGTGTGAACAT+AGG - chr8_2:41852375-41852394 None:intergenic 50.0%
TTCACACTGGTCACGACATC+CGG + chr8_2:41852378-41852397 Msa1248220:intron 50.0%
TTGCCAGAGCTAGGACTTTG+TGG + chr8_2:41852418-41852437 Msa1248220:intron 50.0%
CATCCACAAAGTCCTAGCTC+TGG - chr8_2:41852424-41852443 None:intergenic 50.0%
TAATCTGCAGGTGGAGGGAA+AGG + chr8_2:41852724-41852743 Msa1248220:intron 50.0%
!! GGAGGTATCATATCACGAGG+TGG - chr8_2:41853197-41853216 None:intergenic 50.0%
!! CCAGGAGGTATCATATCACG+AGG - chr8_2:41853200-41853219 None:intergenic 50.0%
CCTCGTGATATGATACCTCC+TGG + chr8_2:41853197-41853216 Msa1248220:CDS 50.0%
TCCCTCCATTCCAATTTGGG+TGG + chr8_2:41853529-41853548 Msa1248220:intron 50.0%
GACCACCCAAATTGGAATGG+AGG - chr8_2:41853534-41853553 None:intergenic 50.0%
CCCTATGTTCCCTATGAGTG+AGG - chr8_2:41854248-41854267 None:intergenic 50.0%
ACTCATAGGGAACATAGGGC+AGG + chr8_2:41854249-41854268 Msa1248220:CDS 50.0%
!! GCTACAGTTTGTGGTGGATG+AGG - chr8_2:41854558-41854577 None:intergenic 50.0%
TACGTCCCTCTCTCAACTTC+CGG + chr8_2:41855138-41855157 Msa1248220:CDS 50.0%
AGCTACCGGAAGTTGAGAGA+GGG - chr8_2:41855146-41855165 None:intergenic 50.0%
ATAGCTTCCTCGGAGAAAGC+TGG - chr8_2:41855402-41855421 None:intergenic 50.0%
GGAAGCTATTGTGGAATCCG+AGG + chr8_2:41855413-41855432 Msa1248220:CDS 50.0%
TGGAGGCAACTCAGGTGATT+CGG - chr8_2:41855451-41855470 None:intergenic 50.0%
ATAATGTCGGGAACAGGCAC+AGG + chr8_2:41855474-41855493 Msa1248220:CDS 50.0%
TAATGTCGGGAACAGGCACA+GGG + chr8_2:41855475-41855494 Msa1248220:CDS 50.0%
GAAACAGAGTCTGTAGGTGG+CGG - chr8_2:41855617-41855636 None:intergenic 50.0%
GGTGAAACAGAGTCTGTAGG+TGG - chr8_2:41855620-41855639 None:intergenic 50.0%
TCGGGTGAAACAGAGTCTGT+AGG - chr8_2:41855623-41855642 None:intergenic 50.0%
ACAGACTCTGTTTCACCCGA+AGG + chr8_2:41855623-41855642 Msa1248220:CDS 50.0%
ACCCGAAGGATACATGCCAA+GGG + chr8_2:41855637-41855656 Msa1248220:CDS 50.0%
TCCCTTGGCATGTATCCTTC+GGG - chr8_2:41855641-41855660 None:intergenic 50.0%
CACCGATATGTCTTGGACAC+TGG + chr8_2:41855842-41855861 Msa1248220:intron 50.0%
GGCAAATTGCGTAGACCTGA+TGG + chr8_2:41855941-41855960 Msa1248220:intron 50.0%
AACGTTCTCAGTCACTGGAG+CGG - chr8_2:41856420-41856439 None:intergenic 50.0%
! GATCAATGTTTGGAGCCGCA+TGG - chr8_2:41856819-41856838 None:intergenic 50.0%
ACAGAAAGTGGGTGCTCGAA+AGG - chr8_2:41857098-41857117 None:intergenic 50.0%
AAGCACAGCAAGGACAGGAA+AGG - chr8_2:41857135-41857154 None:intergenic 50.0%
! GTGAAAAGCACAGCAAGGAC+AGG - chr8_2:41857140-41857159 None:intergenic 50.0%
! GTTAGACAGATTCTGGGGAC+TGG - chr8_2:41857276-41857295 None:intergenic 50.0%
GGTTCCCATCAGATAGCATC+TGG - chr8_2:41857419-41857438 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGACA+GGG - chr8_2:41857557-41857576 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAC+AGG - chr8_2:41857558-41857577 None:intergenic 50.0%
CTCTCTCTCTCTCTCTCTCT+CGG + chr8_2:41857560-41857579 Msa1248220:intron 50.0%
TGGAGGCTTGACTTTGTCAG+AGG + chr8_2:41857890-41857909 Msa1248220:CDS 50.0%
!! ACTTTTGCGTGGGAGAGTAC+TGG + chr8_2:41857960-41857979 Msa1248220:CDS 50.0%
!!! CTTTTGCGTGGGAGAGTACT+GGG + chr8_2:41857961-41857980 Msa1248220:CDS 50.0%
ATCAAGATGCACACAGGCAG+AGG + chr8_2:41858020-41858039 Msa1248220:CDS 50.0%
!! GTTGACTGGATTAGTGCTGC+CGG + chr8_2:41858046-41858065 Msa1248220:CDS 50.0%
AAATGCACCTGCAGTACCAC+CGG - chr8_2:41858068-41858087 None:intergenic 50.0%
TCACACAGTCAGCACATCAG+TGG + chr8_2:41858412-41858431 Msa1248220:intron 50.0%
GTCAGCACATCAGTGGTAGT+TGG + chr8_2:41858419-41858438 Msa1248220:intron 50.0%
CATCTTTCCAACGCCTACAG+AGG - chr8_2:41858682-41858701 None:intergenic 50.0%
CCCCACGGAAAAGAAATGCA+AGG + chr8_2:41859207-41859226 Msa1248220:CDS 50.0%
AGAACACTGACGGAGTTCCT+GGG - chr8_2:41859254-41859273 None:intergenic 50.0%
AAGAACACTGACGGAGTTCC+TGG - chr8_2:41859255-41859274 None:intergenic 50.0%
! GCAGAAGCACAGTGAGTATC+AGG + chr8_2:41859349-41859368 Msa1248220:intron 50.0%
!!! GCAGCTATGTTTTTGGGTGC+TGG + chr8_2:41859511-41859530 Msa1248220:intron 50.0%
GTAGGCCCTAAGCATGCATA+TGG - chr8_2:41859872-41859891 None:intergenic 50.0%
CTACAAGATTTGGGAGCTGG+AGG + chr8_2:41860283-41860302 Msa1248220:CDS 50.0%
! TTGGATGATGGTGTCAGGTG+TGG + chr8_2:41860401-41860420 Msa1248220:three_prime_UTR 50.0%
CCACACCAGAAACTCCCCAA+TGG - chr8_2:41852832-41852851 None:intergenic 55.0%
!! CCATTGGGGAGTTTCTGGTG+TGG + chr8_2:41852829-41852848 Msa1248220:CDS 55.0%
!! TTGGGTGGTCTTGTCGATGC+AGG + chr8_2:41853544-41853563 Msa1248220:intron 55.0%
TCGATGCAGGACGAGGAAAC+TGG + chr8_2:41853557-41853576 Msa1248220:intron 55.0%
AGGACGAGGAAACTGGCACT+TGG + chr8_2:41853564-41853583 Msa1248220:intron 55.0%
!! GTTTGTGGTGGATGAGGAGC+AGG - chr8_2:41854552-41854571 None:intergenic 55.0%
GAGCTACCGGAAGTTGAGAG+AGG - chr8_2:41855147-41855166 None:intergenic 55.0%
CTCGGAGAAAGCTGGAACTG+AGG - chr8_2:41855394-41855413 None:intergenic 55.0%
CTCAGTTCCAGCTTTCTCCG+AGG + chr8_2:41855392-41855411 Msa1248220:CDS 55.0%
CACCCGAAGGATACATGCCA+AGG + chr8_2:41855636-41855655 Msa1248220:CDS 55.0%
ACGTTCTCAGTCACTGGAGC+GGG - chr8_2:41856419-41856438 None:intergenic 55.0%
ATCTGGTAGGCGGTAGCAGT+AGG + chr8_2:41857068-41857087 Msa1248220:intron 55.0%
TCTGGTAGGCGGTAGCAGTA+GGG + chr8_2:41857069-41857088 Msa1248220:intron 55.0%
TAGGAGCTTGAGGCAATGCG+TGG - chr8_2:41857224-41857243 None:intergenic 55.0%
GATGGAGCTGGTGAGAGTCA+TGG - chr8_2:41857362-41857381 None:intergenic 55.0%
ACAGGCAGAGGATCGTTGAC+TGG + chr8_2:41858032-41858051 Msa1248220:CDS 55.0%
! TTTGGCTCCTCTGTAGGCGT+TGG + chr8_2:41858672-41858691 Msa1248220:intron 55.0%
CCTGTGTAGAACCAGTGTCG+TGG - chr8_2:41858792-41858811 None:intergenic 55.0%
!! CCACGACACTGGTTCTACAC+AGG + chr8_2:41858789-41858808 Msa1248220:CDS 55.0%
GGTCACTGGAGATTTCCCCA+CGG + chr8_2:41859192-41859211 Msa1248220:CDS 55.0%
! GGTCTTGTCGATGCAGGACG+AGG + chr8_2:41853550-41853569 Msa1248220:intron 60.0%
!! TGTGGTGGATGAGGAGCAGG+TGG - chr8_2:41854549-41854568 None:intergenic 60.0%
GAGTGAAGAGGCAGGCGAAG+AGG + chr8_2:41855206-41855225 Msa1248220:CDS 60.0%
GTTCTCAGTCACTGGAGCGG+GGG - chr8_2:41856417-41856436 None:intergenic 60.0%
CGTTCTCAGTCACTGGAGCG+GGG - chr8_2:41856418-41856437 None:intergenic 60.0%
GAGCTTGAGGCAATGCGTGG+AGG - chr8_2:41857221-41857240 None:intergenic 60.0%
!! GACTGGATTAGTGCTGCCGG+TGG + chr8_2:41858049-41858068 Msa1248220:CDS 60.0%
GGAAAACCCCCCGGCGTTAT+GGG + chr8_2:41858730-41858749 Msa1248220:CDS 60.0%
AGTGCTGCCGGTGGTACTGC+AGG + chr8_2:41858058-41858077 Msa1248220:CDS 65.0%
TTGGCGCTTGTCGGATCGGC+AGG + chr8_2:41858708-41858727 Msa1248220:CDS 65.0%
TGGCGCTTGTCGGATCGGCA+GGG + chr8_2:41858709-41858728 Msa1248220:CDS 65.0%
GATCGGCAGGGAAAACCCCC+CGG + chr8_2:41858721-41858740 Msa1248220:CDS 65.0%
GGGAAAACCCCCCGGCGTTA+TGG + chr8_2:41858729-41858748 Msa1248220:CDS 65.0%
AACCCCCCGGCGTTATGGGA+TGG + chr8_2:41858734-41858753 Msa1248220:CDS 65.0%
CACCATCCCATAACGCCGGG+GGG - chr8_2:41858739-41858758 None:intergenic 65.0%
CCACCATCCCATAACGCCGG+GGG - chr8_2:41858740-41858759 None:intergenic 65.0%
GCCACCATCCCATAACGCCG+GGG - chr8_2:41858741-41858760 None:intergenic 65.0%
GGCCACCATCCCATAACGCC+GGG - chr8_2:41858742-41858761 None:intergenic 65.0%
CGGCCACCATCCCATAACGC+CGG - chr8_2:41858743-41858762 None:intergenic 65.0%
CCCCCGGCGTTATGGGATGG+TGG + chr8_2:41858737-41858756 Msa1248220:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 41851688 41860699 41851688 ID=Msa1248220;Name=Msa1248220
chr8_2 mRNA 41851688 41860699 41851688 ID=Msa1248220-mRNA-1;Parent=Msa1248220;Name=Msa1248220-mRNA-1;_AED=0.11;_eAED=0.11;_QI=117|0.58|0.61|0.83|1|1|18|386|959
chr8_2 exon 41851688 41852095 41851688 ID=Msa1248220-mRNA-1:exon:12736;Parent=Msa1248220-mRNA-1
chr8_2 exon 41852734 41852864 41852734 ID=Msa1248220-mRNA-1:exon:12737;Parent=Msa1248220-mRNA-1
chr8_2 exon 41853181 41853235 41853181 ID=Msa1248220-mRNA-1:exon:12738;Parent=Msa1248220-mRNA-1
chr8_2 exon 41853330 41853452 41853330 ID=Msa1248220-mRNA-1:exon:12739;Parent=Msa1248220-mRNA-1
chr8_2 exon 41853566 41853686 41853566 ID=Msa1248220-mRNA-1:exon:12740;Parent=Msa1248220-mRNA-1
chr8_2 exon 41854187 41854270 41854187 ID=Msa1248220-mRNA-1:exon:12741;Parent=Msa1248220-mRNA-1
chr8_2 exon 41854367 41854611 41854367 ID=Msa1248220-mRNA-1:exon:12742;Parent=Msa1248220-mRNA-1
chr8_2 exon 41855018 41855496 41855018 ID=Msa1248220-mRNA-1:exon:12743;Parent=Msa1248220-mRNA-1
chr8_2 exon 41855517 41855681 41855517 ID=Msa1248220-mRNA-1:exon:12744;Parent=Msa1248220-mRNA-1
chr8_2 exon 41856097 41856286 41856097 ID=Msa1248220-mRNA-1:exon:12745;Parent=Msa1248220-mRNA-1
chr8_2 exon 41856784 41856890 41856784 ID=Msa1248220-mRNA-1:exon:12746;Parent=Msa1248220-mRNA-1
chr8_2 exon 41857030 41857072 41857030 ID=Msa1248220-mRNA-1:exon:12747;Parent=Msa1248220-mRNA-1
chr8_2 exon 41857216 41857268 41857216 ID=Msa1248220-mRNA-1:exon:12748;Parent=Msa1248220-mRNA-1
chr8_2 exon 41857375 41857461 41857375 ID=Msa1248220-mRNA-1:exon:12749;Parent=Msa1248220-mRNA-1
chr8_2 exon 41857868 41858117 41857868 ID=Msa1248220-mRNA-1:exon:12750;Parent=Msa1248220-mRNA-1
chr8_2 exon 41858688 41858810 41858688 ID=Msa1248220-mRNA-1:exon:12751;Parent=Msa1248220-mRNA-1
chr8_2 exon 41859192 41859359 41859192 ID=Msa1248220-mRNA-1:exon:12752;Parent=Msa1248220-mRNA-1
chr8_2 exon 41860149 41860699 41860149 ID=Msa1248220-mRNA-1:exon:12753;Parent=Msa1248220-mRNA-1
chr8_2 five_prime_UTR 41851688 41851804 41851688 ID=Msa1248220-mRNA-1:five_prime_utr;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41851805 41852095 41851805 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41852734 41852864 41852734 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41853181 41853235 41853181 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41853330 41853452 41853330 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41853566 41853686 41853566 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41854187 41854270 41854187 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41854367 41854611 41854367 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41855018 41855496 41855018 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41855517 41855681 41855517 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41856097 41856286 41856097 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41856784 41856890 41856784 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41857030 41857072 41857030 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41857216 41857268 41857216 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41857375 41857461 41857375 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41857868 41858117 41857868 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41858688 41858810 41858688 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41859192 41859359 41859192 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 CDS 41860149 41860313 41860149 ID=Msa1248220-mRNA-1:cds;Parent=Msa1248220-mRNA-1
chr8_2 three_prime_UTR 41860314 41860699 41860314 ID=Msa1248220-mRNA-1:three_prime_utr;Parent=Msa1248220-mRNA-1
Gene Sequence

>Msa1248220

ATGAGCATCTCCACCACTGTTTTCTCTGAACCACTCTTCAATTTCAAACTATCTCACTACCACAGATTAGCTACCATTAACCGTTTCAAGCCAAATTCTTCACACTCTCTCTCTTCCACTACCAATATTATTAACTATGGTTCTTCTTGTTCTTGGACATTGAAGCAACCCCATAAGTTTCTCTCTCCAAAATTTGAAACTTTTGCTACAAATACTGATACCCTTCAACAGATTCAATCTTCTGATGATGTCATTTTCAGTCAGACTCATCCCATCAACAGAATTGAACTGGTGGAGGGAAAGGTGTTTATAAGATTAGATCAAGGGAATGATTTGAAGAATTCGGAGCTTATAGTTGGATGCAATCTACCAGGAAAATGGATTCTCCATTGGGGAGTTTCTGGTGTGGATGATATTGGAAGGGAATGGAATCAACCACCTCGTGATATGATACCTCCTGGATCTATTCCTATAAAGGACTATGCAATAGAGACACCTTTGAAGAAATCATCATCATCACCGGAAGGAGATACTCTTTATGAAGTCAGGATCGGTTTTAAGCCCAGCAATGAGATTTCAGCGATTAATTTTGTTCTTAAGGACGAGGAAACTGGCACTTGGTATCAACACAAAGGAAGAGACTTCAAAGTTCCTCTGGTAAACTATCTTAAGGAGGATGCTAATTTAATTGGACCTAAAACAGGCTTTAGTTTGTCCCAAGCTTTGTCCTCACAACATTTATTTAATGAGCTTGATCTGACTTACATTTCACTGGTTTTCCTCACTCATAGGGAACATAGGGCAGAAGGTTTCAATGTAGAACTGCCTTTAACCAAGGAAGTTACTGTCAATAACTCTATCAGTGTCTCCGTTAGGAAATGCTCAGAAACAGCTAAAAATATTTTGGATTTAGAAACGGATATACCAGGTGATATTTTCCTTCATTGGGGAGTTTGTAGAGATGATTCAAGAAGTTGGGAAGCTCCACCTGCTCCTCATCCACCACAAACTGTAGCATATAAAGACACAGTTTGGCGAACTCAATTAAAGCCAAAAGGAAGTGGAAAGGGAAGTTCAGTACAAATCTCTTTGGGAGAAGAATTTTCAGGATTTCTTTTTGTTCTTAAGATAAATGAAAATTCATGGTTAAATAACAAGGGAATTGATTTTTACGTCCCTCTCTCAACTTCCGGTAGCTCAGTTATTGGCAACAGAGAGGATCAATCGAAAGTTGTAAAGAGTGAAGAGGCAGGCGAAGAGGAATCTAACTCTGAATTTACCAATGAAATAATCAATGAAATAAGGCATTTGGTTACTGGCATTTCATCTGTGAAGAGACGAAAAACGAAATCCAAAGAAGCTCAAGAAACCATTCTTCAAGAAATTGAAAGACTGGCCGCTGAAGCCTATAGTATCTTTAGAACCTCAGTTCCAGCTTTCTCCGAGGAAGCTATTGTGGAATCCGAGGTTGTTTTGGAATCCGAATCACCTGAGTTGCCTCCAAAAATAATGTCGGGAACAGGCACAGGGTTTAATTGGGAGTCTAATAAATCTGGAAGATGGTACATGGAGCTTAAAAGAAAAGCTAAAGAACTAGCATCTCTTGGCTTTACTGTTATTTGGTTACCGCCACCTACAGACTCTGTTTCACCCGAAGGATACATGCCAAGGGATTTATATAATTTAAATTCTAGGTATGGTACCATTGATGAACTGAAGGATGTGGTGAAAGAATTTCATAAAGTTGGAATCAAAGTGCTAGGAGATGCTGTTTTGAATCATCGTTGTGCCGAGCATCAGAATAAGAATGGTATTTGGAACATATTTGGAGGTCGTCTCAACTGGGATGATCGTGCAGTTGTAGCTGATGATCCACATTTTCAGGGGAGGGGCAACAAGAGTAGTGGAGATAGTTTCCATGCGGCTCCAAACATTGATCATTCACAGGACTTTGTGAGAAACGATATTAAAGAATGGTTATGCTGGTTAAGTCTTGGTTTCATTGGAAATGTTGGAGAATTGAGATGGTATCTGAGCCTCCACGCATTGCCTCAAGCTCCTAGACTTTGTCAATCGCTTCTGATCAACTCCATCTTTGTCTCAGAACGTTCTGGCTGCGTCTCCAATCCCAGATGCTATCTGATGGGAACCCTGATTTCAGAAGCTGAAATTAAAGAAGAAATTGGATATGATGGATGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTAAAGGACTACATGGATGCAACCAAACCATACTTTTGCGTGGGAGAGTACTGGGATTCCCTCAGTTATACATATGGTGAAATGGATCATAATCAAGATGCACACAGGCAGAGGATCGTTGACTGGATTAGTGCTGCCGGTGGTACTGCAGGTGCATTTGATGTTACAACCAAAGGGATTCTTCACTCTGCGTTGGAAAGATGTGAATATTGGCGCTTGTCGGATCGGCAGGGAAAACCCCCCGGCGTTATGGGATGGTGGCCGTCTCGTGCCGTTACTTTTATAGAAAACCACGACACTGGTTCTACACAGGGTCACTGGAGATTTCCCCACGGAAAAGAAATGCAAGGATATGCTTATACTCTTACTCACCCAGGAACTCCGTCAGTGTTCTTTGACCACATTTTTTCTCACTATAAAACTGAAATAGGGGCACTTCTCTCTATTCGGAAACGAAACGGGATCAACTGCAGAAGCACAGTTAAAATTACCAAATCAGAAAGGGACGTTTATGCTGCTATCATAGACGAAAAAATTGCTATGAAGATCGGTCCTGGTCATTATGAACCACCTAGTGATTCCCAAAAATGGAAATCAGCTTGGGACGGAAGAGACTACAAGATTTGGGAGCTGGAGGAATCATAA
Protein sequence

>Msa1248220

MSISTTVFSEPLFNFKLSHYHRLATINRFKPNSSHSLSSTTNIINYGSSCSWTLKQPHKFLSPKFETFATNTDTLQQIQSSDDVIFSQTHPINRIELVEGKVFIRLDQGNDLKNSELIVGCNLPGKWILHWGVSGVDDIGREWNQPPRDMIPPGSIPIKDYAIETPLKKSSSSPEGDTLYEVRIGFKPSNEISAINFVLKDEETGTWYQHKGRDFKVPLVNYLKEDANLIGPKTGFSLSQALSSQHLFNELDLTYISLVFLTHREHRAEGFNVELPLTKEVTVNNSISVSVRKCSETAKNILDLETDIPGDIFLHWGVCRDDSRSWEAPPAPHPPQTVAYKDTVWRTQLKPKGSGKGSSVQISLGEEFSGFLFVLKINENSWLNNKGIDFYVPLSTSGSSVIGNREDQSKVVKSEEAGEEESNSEFTNEIINEIRHLVTGISSVKRRKTKSKEAQETILQEIERLAAEAYSIFRTSVPAFSEEAIVESEVVLESESPELPPKIMSGTGTGFNWESNKSGRWYMELKRKAKELASLGFTVIWLPPPTDSVSPEGYMPRDLYNLNSRYGTIDELKDVVKEFHKVGIKVLGDAVLNHRCAEHQNKNGIWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDSFHAAPNIDHSQDFVRNDIKEWLCWLSLGFIGNVGELRWYLSLHALPQAPRLCQSLLINSIFVSERSGCVSNPRCYLMGTLISEAEIKEEIGYDGWRLDFVRGFWGGYVKDYMDATKPYFCVGEYWDSLSYTYGEMDHNQDAHRQRIVDWISAAGGTAGAFDVTTKGILHSALERCEYWRLSDRQGKPPGVMGWWPSRAVTFIENHDTGSTQGHWRFPHGKEMQGYAYTLTHPGTPSVFFDHIFSHYKTEIGALLSIRKRNGINCRSTVKITKSERDVYAAIIDEKIAMKIGPGHYEPPSDSQKWKSAWDGRDYKIWELEES*