AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1145560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1145560 MtrunA17_Chr7g0254701 98.127 267 5 0 50 316 1 267 0.0 536
Msa1145560 MtrunA17_Chr4g0060351 36.029 136 87 0 62 197 7 142 7.06e-29 108
Msa1145560 MtrunA17_Chr8g0362321 35.294 136 88 0 62 197 7 142 7.93e-29 108
Msa1145560 MtrunA17_Chr2g0316211 38.158 152 90 1 53 204 3 150 1.49e-28 107
Msa1145560 MtrunA17_Chr2g0316201 37.500 152 91 1 53 204 3 150 7.27e-28 105
Msa1145560 MtrunA17_Chr3g0131871 36.154 130 82 1 78 206 22 151 4.24e-26 102
Msa1145560 MtrunA17_Chr3g0108261 34.965 143 93 0 62 204 4 146 1.23e-24 97.4
Msa1145560 MtrunA17_Chr5g0432831 34.965 143 93 0 62 204 4 146 1.23e-24 97.4
Msa1145560 MtrunA17_Chr1g0154011 34.965 143 93 0 62 204 4 146 1.31e-24 97.1
Msa1145560 MtrunA17_Chr7g0275361 34.266 143 94 0 62 204 4 146 4.95e-24 95.5
Msa1145560 MtrunA17_Chr8g0369311 34.266 143 94 0 62 204 60 202 1.19e-23 96.3
Msa1145560 MtrunA17_Chr4g0037011 34.532 139 91 0 62 200 4 142 1.60e-23 94.4
Msa1145560 MtrunA17_Chr3g0139901 35.570 149 92 3 63 207 7 155 1.89e-23 94.4
Msa1145560 MtrunA17_Chr1g0199951 32.192 146 95 3 59 201 41 185 5.38e-18 80.5
Msa1145560 MtrunA17_Chr8g0378601 29.921 127 89 0 62 188 25 151 5.55e-18 80.1
Msa1145560 MtrunA17_Chr4g0053191 35.849 106 66 1 95 198 45 150 8.45e-18 79.3
Msa1145560 MtrunA17_Chr4g0038891 30.968 155 99 2 52 199 18 171 8.93e-17 77.0
Msa1145560 MtrunA17_Chr5g0401831 30.986 142 91 3 63 197 8 149 1.20e-16 75.9
Msa1145560 MtrunA17_Chr5g0396451 31.915 141 95 1 59 199 32 171 2.18e-16 75.9
Msa1145560 MtrunA17_Chr8g0348701 27.344 128 91 2 80 205 21 148 5.30e-16 75.1
Msa1145560 MtrunA17_Chr8g0387131 28.125 128 90 2 80 205 21 148 1.08e-15 73.9
Msa1145560 MtrunA17_Chr4g0059291 25.600 125 91 2 85 207 26 150 1.22e-12 65.5
Msa1145560 MtrunA17_Chr5g0403591 33.000 100 67 0 98 197 67 166 2.69e-12 64.3
Msa1145560 MtrunA17_Chr4g0031181 25.397 126 81 1 82 194 28 153 4.58e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1145560 AT5G05080.2 68.165 267 69 2 50 316 1 251 4.20e-127 363
Msa1145560 AT5G05080.3 68.165 267 69 2 50 316 1 251 4.20e-127 363
Msa1145560 AT5G05080.1 68.165 267 69 2 50 316 1 251 4.20e-127 363
Msa1145560 AT5G05080.4 68.165 267 69 2 50 316 1 251 4.20e-127 363
Msa1145560 AT2G02760.1 35.294 136 88 0 62 197 7 142 2.31e-28 107
Msa1145560 AT2G02760.2 35.294 136 88 0 62 197 7 142 2.31e-28 107
Msa1145560 AT2G02760.4 35.294 136 88 0 62 197 7 142 2.31e-28 107
Msa1145560 AT2G02760.3 35.294 136 88 0 62 197 7 142 2.31e-28 107
Msa1145560 AT1G14400.1 35.294 136 88 0 62 197 7 142 3.45e-28 107
Msa1145560 AT1G14400.2 35.294 136 88 0 62 197 7 142 3.45e-28 107
Msa1145560 AT1G78870.2 37.500 152 91 1 53 204 3 150 1.59e-27 105
Msa1145560 AT1G16890.2 36.842 152 92 1 53 204 3 150 4.36e-27 104
Msa1145560 AT5G50870.1 33.793 145 94 2 63 205 6 150 5.22e-26 102
Msa1145560 AT5G62540.1 35.338 133 86 0 62 194 7 139 1.07e-25 100
Msa1145560 AT1G16890.3 34.591 159 95 2 53 204 3 159 4.58e-25 99.4
Msa1145560 AT4G27960.1 34.266 143 94 0 62 204 4 146 1.84e-24 97.1
Msa1145560 AT5G41700.5 34.965 143 93 0 62 204 4 146 2.00e-24 97.1
Msa1145560 AT5G41700.2 34.965 143 93 0 62 204 4 146 2.00e-24 97.1
Msa1145560 AT5G41700.1 34.965 143 93 0 62 204 4 146 2.00e-24 97.1
Msa1145560 AT5G53300.2 34.266 143 94 0 62 204 4 146 3.37e-24 96.3
Msa1145560 AT5G53300.4 34.266 143 94 0 62 204 4 146 3.37e-24 96.3
Msa1145560 AT5G53300.1 34.266 143 94 0 62 204 4 146 3.37e-24 96.3
Msa1145560 AT1G64230.2 33.566 143 95 0 62 204 4 146 5.33e-24 95.9
Msa1145560 AT1G64230.1 33.566 143 95 0 62 204 4 146 5.33e-24 95.9
Msa1145560 AT4G27960.2 33.125 160 103 1 49 204 17 176 6.94e-24 96.7
Msa1145560 AT2G16740.1 34.965 143 93 0 62 204 4 146 7.67e-24 95.5
Msa1145560 AT3G08690.2 33.566 143 95 0 62 204 4 146 1.36e-23 94.7
Msa1145560 AT3G08690.1 33.566 143 95 0 62 204 4 146 1.36e-23 94.7
Msa1145560 AT5G41700.4 35.862 145 90 2 62 204 4 147 2.80e-23 94.0
Msa1145560 AT1G78870.3 40.909 110 61 1 53 162 3 108 3.12e-23 92.8
Msa1145560 AT5G56150.1 32.867 143 96 0 62 204 4 146 3.61e-23 93.6
Msa1145560 AT5G50870.2 31.410 156 94 3 63 205 6 161 5.47e-23 94.7
Msa1145560 AT1G64230.3 32.895 152 93 2 62 204 4 155 5.61e-23 93.6
Msa1145560 AT1G16890.1 40.909 110 65 0 95 204 8 117 7.05e-23 92.0
Msa1145560 AT1G78870.4 40.909 110 65 0 95 204 8 117 8.86e-23 91.7
Msa1145560 AT3G24515.1 37.342 158 86 3 63 207 10 167 2.37e-22 97.1
Msa1145560 AT5G25760.1 37.302 126 76 2 63 185 7 132 4.64e-22 90.9
Msa1145560 AT5G25760.2 37.302 126 76 2 63 185 7 132 4.64e-22 90.9
Msa1145560 AT3G13550.1 30.556 144 100 0 62 205 39 182 1.19e-21 90.5
Msa1145560 AT1G36340.2 41.071 112 66 0 93 204 41 152 1.38e-21 89.7
Msa1145560 AT1G36340.1 41.071 112 66 0 93 204 41 152 1.38e-21 89.7
Msa1145560 AT3G08700.2 31.944 144 97 1 62 204 4 147 3.98e-21 88.2
Msa1145560 AT3G08700.1 31.944 144 97 1 62 204 4 147 3.98e-21 88.2
Msa1145560 AT1G78870.1 40.541 111 65 1 95 204 8 118 4.59e-21 87.4
Msa1145560 AT5G41700.3 37.500 104 65 0 62 165 4 107 5.66e-21 87.8
Msa1145560 AT3G24515.3 36.842 133 77 2 79 207 63 192 3.54e-20 90.9
Msa1145560 AT3G13550.2 32.143 112 76 0 62 173 39 150 1.39e-19 84.7
Msa1145560 AT5G56150.2 37.000 100 63 0 62 161 4 103 1.58e-19 82.8
Msa1145560 AT5G53300.3 38.384 99 61 0 62 160 4 102 1.62e-19 82.8
Msa1145560 AT1G64230.5 35.714 112 72 0 93 204 77 188 2.01e-19 84.7
Msa1145560 AT1G64230.4 35.714 112 72 0 93 204 77 188 2.01e-19 84.7
Msa1145560 AT3G20060.1 33.571 140 92 1 60 199 37 175 1.14e-17 79.7
Msa1145560 AT1G50490.1 34.043 141 92 1 59 199 35 174 7.31e-17 77.4
Msa1145560 AT1G63800.2 28.462 130 91 2 80 207 6 135 7.97e-16 74.3
Msa1145560 AT1G63800.1 28.462 130 91 2 80 207 21 150 8.75e-16 74.7
Msa1145560 AT3G20060.2 34.426 122 79 1 78 199 10 130 1.03e-15 73.2
Msa1145560 AT3G57870.1 30.070 143 93 3 63 198 9 151 2.98e-15 72.8
Msa1145560 AT5G41340.1 27.344 128 91 2 80 205 21 148 1.74e-14 71.2
Msa1145560 AT2G46030.5 28.125 128 90 2 80 205 21 148 1.01e-13 68.9
Msa1145560 AT2G46030.1 28.125 128 90 2 80 205 21 148 1.01e-13 68.9
Msa1145560 AT2G46030.4 28.125 128 90 2 80 205 24 151 1.72e-13 68.2
Msa1145560 AT2G46030.2 28.125 128 90 2 80 205 24 151 1.72e-13 68.2
Msa1145560 AT2G18600.1 33.043 115 74 1 98 209 69 183 1.74e-13 68.2
Msa1145560 AT2G18600.2 33.043 115 74 1 98 209 69 183 1.74e-13 68.2
Msa1145560 AT2G46030.3 28.125 128 90 2 80 205 93 220 3.55e-13 68.6
Msa1145560 AT4G36800.2 33.613 119 73 3 86 201 57 172 4.40e-13 67.0
Msa1145560 AT4G36800.1 33.613 119 73 3 86 201 57 172 4.40e-13 67.0
Msa1145560 AT5G41340.2 28.571 105 73 2 103 205 9 113 1.05e-11 62.4
Msa1145560 AT2G32790.1 35.398 113 73 0 93 205 64 176 1.11e-11 63.2

Find 73 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCACTGTTGGCAATATT+TGG 0.133789 7_4:-22425608 None:intergenic
TTGTGTACTATTGATCTTTC+TGG 0.148256 7_4:+22426585 Msa1145560:three_prime_UTR
AAAACTAAGGCACAAATAAA+AGG 0.283841 7_4:-22426472 None:intergenic
GTCATTTACTGTTGATTACT+TGG 0.327343 7_4:+22426683 Msa1145560:three_prime_UTR
AGTTCATTTAAAGCTGATTC+TGG 0.328582 7_4:-22425840 None:intergenic
TTGTGTCAACGCGCTCAAAA+AGG 0.346414 7_4:+22425634 Msa1145560:CDS
TCCTCTTGCTCCAGTGGTTG+AGG 0.353319 7_4:-22426251 None:intergenic
CCCATAATCAACAGGTTGTT+AGG 0.362147 7_4:+22425796 Msa1145560:intron
AGAATCAGCTTTAAATGAAC+TGG 0.367979 7_4:+22425842 Msa1145560:CDS
GCAAGTTGCCTTATCACATT+AGG 0.371102 7_4:-22425060 None:intergenic
TTGCAATTTGATAGAAAGAA+AGG 0.378430 7_4:+22426493 Msa1145560:three_prime_UTR
CTAAACGAATCTACACGTTC+TGG 0.389591 7_4:+22423387 Msa1145560:CDS
TGTGTACTATTGATCTTTCT+GGG 0.394804 7_4:+22426586 Msa1145560:three_prime_UTR
TCTATCAAATTGCAAAACTA+AGG 0.411937 7_4:-22426485 None:intergenic
CCTCTTGCTCCAGTGGTTGA+GGG 0.414800 7_4:-22426250 None:intergenic
AAGTGTTTGAGTAAAATTAG+AGG 0.432184 7_4:-22426706 None:intergenic
ATTCAGAGCAGTAGTTGATT+CGG 0.434687 7_4:-22426146 None:intergenic
TTTAAAGCTGATTCTGGAAA+CGG 0.436344 7_4:-22425834 None:intergenic
GATCTGCCACTGCTACGTTC+TGG 0.448162 7_4:+22423352 Msa1145560:CDS
AATATTTGGATGGAAAATCT+TGG 0.449656 7_4:-22425594 None:intergenic
GGAATCCTAGCCTTGGGTTA+CGG 0.454102 7_4:+22425660 Msa1145560:CDS
GGGGAAGGGATATGGGTAAT+GGG 0.460053 7_4:+22426549 Msa1145560:three_prime_UTR
AAGAGGAACTAGTCAGGATC+AGG 0.466133 7_4:+22426267 Msa1145560:CDS
AGGATTGGAATCCTAGCCTT+GGG 0.467861 7_4:+22425654 Msa1145560:CDS
CGGAAAACTCCACTCTCATA+AGG 0.469183 7_4:-22425276 None:intergenic
CTGTCATTGCCCTCAACCAC+TGG 0.475571 7_4:+22426241 Msa1145560:CDS
TTTCCACACTCTCCTCCTAA+AGG 0.481533 7_4:+22425324 Msa1145560:CDS
GACATCAAAACCATGCCGTC+AGG 0.481655 7_4:+22426202 Msa1145560:CDS
ATCTTCCGCCTAATGTGATA+AGG 0.491201 7_4:+22425052 Msa1145560:CDS
CTGCTCATGCACCACAAAAG+AGG 0.495555 7_4:+22426353 Msa1145560:CDS
ATCAACAGTAAATGACAGTA+AGG 0.500543 7_4:-22426676 None:intergenic
AACTTTAATGCCCTCAGGAG+GGG 0.501972 7_4:-22425109 None:intergenic
ACTAGTTCCTCTTGCTCCAG+TGG 0.503278 7_4:-22426257 None:intergenic
AAGGATTGGAATCCTAGCCT+TGG 0.504209 7_4:+22425653 Msa1145560:CDS
CACTGTTGGCAATATTTGGA+TGG 0.511422 7_4:-22425604 None:intergenic
GACACAAATCTCTCCACTGT+TGG 0.513774 7_4:-22425618 None:intergenic
TTTGCTGACATTGAAGGCCC+TGG 0.514631 7_4:+22425162 Msa1145560:CDS
ACTACTGCTTGAAAATTATG+AGG 0.514928 7_4:+22425872 Msa1145560:CDS
TATTTAAACACACCTTTAGG+AGG 0.530844 7_4:-22425336 None:intergenic
TGGAGCAAGAGGAACTAGTC+AGG 0.535304 7_4:+22426261 Msa1145560:CDS
CATTGGAACTGCTAAAGCTC+AGG 0.536497 7_4:+22426378 Msa1145560:CDS
TCAAAGCCGAAATTCAAAAG+TGG 0.539030 7_4:+22426115 Msa1145560:CDS
TAGTCAGGATCAGGCAGTAG+TGG 0.540085 7_4:+22426276 Msa1145560:CDS
CCCTCAACCACTGGAGCAAG+AGG 0.542063 7_4:+22426250 Msa1145560:CDS
CAGAGCAGCACCTGACGGCA+TGG 0.548312 7_4:-22426212 None:intergenic
ACGACAACTTTAATGCCCTC+AGG 0.561456 7_4:-22425114 None:intergenic
GCACCACAAAAGAGGGACAT+TGG 0.563104 7_4:+22426361 Msa1145560:CDS
TGCTCATGCACCACAAAAGA+GGG 0.567894 7_4:+22426354 Msa1145560:CDS
TAATGTTTCTTCTGCTGCCG+CGG 0.572323 7_4:+22426321 Msa1145560:CDS
TCAGCTTTAAATGAACTGGC+TGG 0.575529 7_4:+22425846 Msa1145560:CDS
TGTGATAAGGCAACTTGCCA+AGG 0.579080 7_4:+22425065 Msa1145560:CDS
AGGAGTATGCTAGACATGCC+AGG 0.585519 7_4:+22425892 Msa1145560:CDS
AAGATGATGGAAAACTTCAA+AGG 0.586281 7_4:+22423300 None:intergenic
TCTTGATGAAACCCCTCCTG+AGG 0.594622 7_4:+22425098 Msa1145560:CDS
AGTCAGGATCAGGCAGTAGT+GGG 0.598334 7_4:+22426277 Msa1145560:CDS
CAACTTTAATGCCCTCAGGA+GGG 0.602990 7_4:-22425110 None:intergenic
AGAACGTAGCAGTGGCAGAT+CGG 0.605007 7_4:-22423350 None:intergenic
CATCCAAATATTGCCAACAG+TGG 0.613849 7_4:+22425605 Msa1145560:CDS
CTTGATGAAACCCCTCCTGA+GGG 0.614249 7_4:+22425099 Msa1145560:CDS
GCGATAGTTTCAACTTCATG+CGG 0.617025 7_4:-22425296 None:intergenic
AGTTGCCTTATCACATTAGG+CGG 0.618457 7_4:-22425057 None:intergenic
GCTGCAACTCCTTATGAGAG+TGG 0.619407 7_4:+22425267 Msa1145560:intron
AGCAGTCCAGAACGTAGCAG+TGG 0.620384 7_4:-22423358 None:intergenic
TAAGAATATGCCGTAACCCA+AGG 0.622851 7_4:-22425670 None:intergenic
ACAACTTTAATGCCCTCAGG+AGG 0.632908 7_4:-22425111 None:intergenic
GGTGGCAGAGCAGCACCTGA+CGG 0.636975 7_4:-22426217 None:intergenic
ACACCTTTAGGAGGAGAGTG+TGG 0.641291 7_4:-22425327 None:intergenic
AGAAACATTAGCAGACGACT+CGG 0.654224 7_4:-22426308 None:intergenic
GTGGTTGAGGGCAATGACAG+TGG 0.706158 7_4:-22426238 None:intergenic
GTTGAGGGCAATGACAGTGG+TGG 0.726469 7_4:-22426235 None:intergenic
TGTTGATCAGACAAACACCT+CGG 0.734036 7_4:+22426168 Msa1145560:CDS
ATGAGCAGCAGAAACTACCG+CGG 0.757246 7_4:-22426338 None:intergenic
GATGTCAGCATTAAGCACCG+AGG 0.759983 7_4:-22426185 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAATAATAATAATAAA+AGG + chr7_4:22424049-22424068 Msa1145560:intron 0.0%
!! TATATATATATATAATAAAT+TGG - chr7_4:22425945-22425964 None:intergenic 0.0%
!!! ATTTATTTTATGTTTTGTGT+TGG - chr7_4:22423902-22423921 None:intergenic 15.0%
!!! ATTTTTTTTTAAAAAACGAC+TGG + chr7_4:22424434-22424453 Msa1145560:intron 15.0%
!!! TTTTTTTTTAAAAAACGACT+GGG + chr7_4:22424435-22424454 Msa1145560:intron 15.0%
!! NNNNNNNNNNCTATTCCATT+TGG + chr7_4:22424810-22424829 Msa1145560:intron 15.0%
!! NNNNNNNNNCTATTCCATTT+GGG + chr7_4:22424811-22424830 Msa1145560:intron 15.0%
!! TATATATATAATAAATTGGC+AGG - chr7_4:22425941-22425960 None:intergenic 15.0%
!! AACAAAAAAAACAAAAAAAG+AGG + chr7_4:22426521-22426540 Msa1145560:three_prime_UTR 15.0%
!! ACAAAAAAAACAAAAAAAGA+GGG + chr7_4:22426522-22426541 Msa1145560:three_prime_UTR 15.0%
!! TGAAAACATTATCTTAAATG+AGG + chr7_4:22424082-22424101 Msa1145560:intron 20.0%
!! ATGACTTTAAATGAATAAAG+CGG + chr7_4:22424398-22424417 Msa1145560:intron 20.0%
!! CAAAAAAAACAAAAAAAGAG+GGG + chr7_4:22426523-22426542 Msa1145560:three_prime_UTR 20.0%
! GGAATTGAAAAGAGAAATTA+GGG + chr7_4:22423645-22423664 Msa1145560:intron 25.0%
! TGTCTTAAATAGCAAAAAGT+AGG + chr7_4:22423726-22423745 Msa1145560:intron 25.0%
! GTCTTAAATAGCAAAAAGTA+GGG + chr7_4:22423727-22423746 Msa1145560:intron 25.0%
! AGACATTTCAGTCAAAATTT+CGG - chr7_4:22424128-22424147 None:intergenic 25.0%
! TGAAATGTCTAAAAATAACG+CGG + chr7_4:22424138-22424157 Msa1145560:intron 25.0%
!! GTCGTCTTTTTAAATTTTTG+AGG - chr7_4:22424375-22424394 None:intergenic 25.0%
!! ATTCCATTTTGGATTTGTAA+CGG + chr7_4:22424979-22424998 Msa1145560:intron 25.0%
! TTCTATTTAAACACACCTTT+AGG - chr7_4:22425342-22425361 None:intergenic 25.0%
!! CTACATTAGTATTTTTCTGT+TGG + chr7_4:22425362-22425381 Msa1145560:intron 25.0%
! CTTTCAATTCGGAAAAATAA+AGG - chr7_4:22425465-22425484 None:intergenic 25.0%
! TATACTCGATTCTTTCAATT+CGG - chr7_4:22425476-22425495 None:intergenic 25.0%
! CCTATAACATTAAATTTGAC+AGG - chr7_4:22425563-22425582 None:intergenic 25.0%
! CCTGTCAAATTTAATGTTAT+AGG + chr7_4:22425560-22425579 Msa1145560:intron 25.0%
! AATATTTGGATGGAAAATCT+TGG - chr7_4:22425597-22425616 None:intergenic 25.0%
!! TGACTTTTTGAATTAAGTTC+TGG + chr7_4:22425739-22425758 Msa1145560:intron 25.0%
! TATATATATATGTCGATCTG+TGG + chr7_4:22425965-22425984 Msa1145560:intron 25.0%
! AAAACTAAGGCACAAATAAA+AGG - chr7_4:22426475-22426494 None:intergenic 25.0%
! TCTATCAAATTGCAAAACTA+AGG - chr7_4:22426488-22426507 None:intergenic 25.0%
! TTGCAATTTGATAGAAAGAA+AGG + chr7_4:22426493-22426512 Msa1145560:three_prime_UTR 25.0%
! AAGTGTTTGAGTAAAATTAG+AGG - chr7_4:22426709-22426728 None:intergenic 25.0%
GTCATCAATATGAACTTACA+AGG - chr7_4:22423455-22423474 None:intergenic 30.0%
! TTTGTGGTTTGATTCGAAAT+TGG + chr7_4:22423623-22423642 Msa1145560:intron 30.0%
! TTGTGGTTTGATTCGAAATT+GGG + chr7_4:22423624-22423643 Msa1145560:intron 30.0%
GGGAATTGAAAAGAGAAATT+AGG + chr7_4:22423644-22423663 Msa1145560:intron 30.0%
!! GCGAACAAAATCTTTTAAAG+CGG + chr7_4:22424171-22424190 Msa1145560:intron 30.0%
TTAAAAAACTGACGTGCAAA+AGG + chr7_4:22424294-22424313 Msa1145560:intron 30.0%
AGGAATAATTACACGAAACT+TGG + chr7_4:22424314-22424333 Msa1145560:intron 30.0%
!! TTTTAAAAAACGACTGGGAA+AGG + chr7_4:22424440-22424459 Msa1145560:intron 30.0%
! TTCCATTCCCATATTGATTA+AGG + chr7_4:22424496-22424515 Msa1145560:intron 30.0%
TGTAGTTGTTCTATTCCATT+TGG + chr7_4:22424904-22424923 Msa1145560:intron 30.0%
GTAGTTGTTCTATTCCATTT+GGG + chr7_4:22424905-22424924 Msa1145560:intron 30.0%
ATTACACGACAAATCCAAAA+TGG - chr7_4:22424953-22424972 None:intergenic 30.0%
! GTAATTGTTCGATTCCATTT+TGG + chr7_4:22424968-22424987 Msa1145560:intron 30.0%
!!! TTGTATGGTGCTTTTGTTTT+AGG + chr7_4:22425017-22425036 Msa1145560:intron 30.0%
!! ATCAAGATTTTTCAACTCCT+TGG - chr7_4:22425085-22425104 None:intergenic 30.0%
! ACAATTTTTGCTGACATTGA+AGG + chr7_4:22425156-22425175 Msa1145560:CDS 30.0%
TATTTAAACACACCTTTAGG+AGG - chr7_4:22425339-22425358 None:intergenic 30.0%
! AGGAATCAATCAATGTTTTC+AGG - chr7_4:22425445-22425464 None:intergenic 30.0%
CATATTCTTATCGTAAGTCT+TGG + chr7_4:22425683-22425702 Msa1145560:intron 30.0%
! TGAATTAAGTTCTGGTTGAT+TGG + chr7_4:22425747-22425766 Msa1145560:intron 30.0%
! TTTAAAGCTGATTCTGGAAA+CGG - chr7_4:22425837-22425856 None:intergenic 30.0%
! AGTTCATTTAAAGCTGATTC+TGG - chr7_4:22425843-22425862 None:intergenic 30.0%
!! AGAATCAGCTTTAAATGAAC+TGG + chr7_4:22425842-22425861 Msa1145560:CDS 30.0%
ACTACTGCTTGAAAATTATG+AGG + chr7_4:22425872-22425891 Msa1145560:CDS 30.0%
!! ATAGCTCCACTTTTGAATTT+CGG - chr7_4:22426124-22426143 None:intergenic 30.0%
AAAAAACAAAAAAAGAGGGG+AGG + chr7_4:22426526-22426545 Msa1145560:three_prime_UTR 30.0%
AAAAACAAAAAAAGAGGGGA+GGG + chr7_4:22426527-22426546 Msa1145560:three_prime_UTR 30.0%
TTGTGTACTATTGATCTTTC+TGG + chr7_4:22426585-22426604 Msa1145560:three_prime_UTR 30.0%
TGTGTACTATTGATCTTTCT+GGG + chr7_4:22426586-22426605 Msa1145560:three_prime_UTR 30.0%
ATCAACAGTAAATGACAGTA+AGG - chr7_4:22426679-22426698 None:intergenic 30.0%
! GTCATTTACTGTTGATTACT+TGG + chr7_4:22426683-22426702 Msa1145560:three_prime_UTR 30.0%
AAAAACGTGTAGATCGGAAT+TGG - chr7_4:22423431-22423450 None:intergenic 35.0%
AGTTGTGAGAGATTTGTGTT+TGG + chr7_4:22423492-22423511 Msa1145560:intron 35.0%
AGATTTGTGTTTGGAAACGA+TGG + chr7_4:22423501-22423520 Msa1145560:intron 35.0%
ATGAAGAACACAAGAACATG+AGG - chr7_4:22423579-22423598 None:intergenic 35.0%
!!! GCTGTTCTTGACATTTTTTG+TGG + chr7_4:22423607-22423626 Msa1145560:intron 35.0%
AGAGAAATTAGGGTTTCTGA+TGG + chr7_4:22423655-22423674 Msa1145560:intron 35.0%
ACCTGTATCAGAGACTTTAA+GGG - chr7_4:22423786-22423805 None:intergenic 35.0%
!! TTTGTGTTGGTTAAGTCCTT+GGG - chr7_4:22423889-22423908 None:intergenic 35.0%
!!! TTTTGTGTTGGTTAAGTCCT+TGG - chr7_4:22423890-22423909 None:intergenic 35.0%
! GAAATGACTGGTCCAAAATT+GGG + chr7_4:22424462-22424481 Msa1145560:intron 35.0%
! AAATGACTGGTCCAAAATTG+GGG + chr7_4:22424463-22424482 Msa1145560:intron 35.0%
! ACATTGTCATACCCCAATTT+TGG - chr7_4:22424477-22424496 None:intergenic 35.0%
GTCCTTAATCAATATGGGAA+TGG - chr7_4:22424501-22424520 None:intergenic 35.0%
CTCTGGTCCTTAATCAATAT+GGG - chr7_4:22424506-22424525 None:intergenic 35.0%
TCTCTGGTCCTTAATCAATA+TGG - chr7_4:22424507-22424526 None:intergenic 35.0%
TTTCTGATGATATAGCTCTC+TGG - chr7_4:22424523-22424542 None:intergenic 35.0%
CATGTCTAAACCACAAGAAA+GGG + chr7_4:22424654-22424673 Msa1145560:intron 35.0%
ATGAGTTAAACCCTTTCTTG+TGG - chr7_4:22424667-22424686 None:intergenic 35.0%
ACAAGAAAGGGTTTAACTCA+TGG + chr7_4:22424666-22424685 Msa1145560:intron 35.0%
! NATTTTCATCTCCATCTCTG+AGG - chr7_4:22424701-22424720 None:intergenic 35.0%
ACTACACGACAAATCGAAAA+TGG - chr7_4:22424890-22424909 None:intergenic 35.0%
! GTAGTTGTTCGATTCCATTT+TGG + chr7_4:22424936-22424955 Msa1145560:intron 35.0%
AAAAAGGAAGTTGCTTACCA+GGG - chr7_4:22425182-22425201 None:intergenic 35.0%
TAAAAAGGAAGTTGCTTACC+AGG - chr7_4:22425183-22425202 None:intergenic 35.0%
! TGTGGAAGGGTACATTAAAA+AGG - chr7_4:22425198-22425217 None:intergenic 35.0%
!! CATTGATTCCCATAATCAAC+AGG + chr7_4:22425788-22425807 Msa1145560:intron 35.0%
! CCTAACAACCTGTTGATTAT+GGG - chr7_4:22425799-22425818 None:intergenic 35.0%
! ACCTAACAACCTGTTGATTA+TGG - chr7_4:22425800-22425819 None:intergenic 35.0%
GTCTTACGTAAAAACTAGCA+TGG - chr7_4:22426022-22426041 None:intergenic 35.0%
! GTTTTTACGTAAGACATTCC+CGG + chr7_4:22426027-22426046 Msa1145560:intron 35.0%
!! CTTTGATTTTGCATGGATTC+CGG - chr7_4:22426101-22426120 None:intergenic 35.0%
!! ATTTCGGCTTTGATTTTGCA+TGG - chr7_4:22426108-22426127 None:intergenic 35.0%
TCAAAGCCGAAATTCAAAAG+TGG + chr7_4:22426115-22426134 Msa1145560:CDS 35.0%
ATTCAGAGCAGTAGTTGATT+CGG - chr7_4:22426149-22426168 None:intergenic 35.0%
AAAACAAAAAAAGAGGGGAG+GGG + chr7_4:22426528-22426547 Msa1145560:three_prime_UTR 35.0%
CTAAACGAATCTACACGTTC+TGG + chr7_4:22423387-22423406 Msa1145560:CDS 40.0%
CAAGGCAAAAACGTGTAGAT+CGG - chr7_4:22423437-22423456 None:intergenic 40.0%
TGTTTGGAAACGATGGCTAA+AGG + chr7_4:22423508-22423527 Msa1145560:intron 40.0%
!! GATGGCTAAAGGTATTGTGA+TGG + chr7_4:22423519-22423538 Msa1145560:intron 40.0%
!! TTGTGATGGATTCACGTTAC+TGG + chr7_4:22423533-22423552 Msa1145560:intron 40.0%
! TGTCTTTTGCATCAGAGTCA+GGG - chr7_4:22423757-22423776 None:intergenic 40.0%
ACCCTTAAAGTCTCTGATAC+AGG + chr7_4:22423782-22423801 Msa1145560:intron 40.0%
CACCTGTATCAGAGACTTTA+AGG - chr7_4:22423787-22423806 None:intergenic 40.0%
CAGTCAAAATTTCGGCAAAG+AGG - chr7_4:22424120-22424139 None:intergenic 40.0%
CGGTTTAAACACGTACAAAG+AGG + chr7_4:22424191-22424210 Msa1145560:intron 40.0%
! GGAAATGACTGGTCCAAAAT+TGG + chr7_4:22424461-22424480 Msa1145560:intron 40.0%
CCTTTCTTGTGGTTTAGACA+TGG - chr7_4:22424656-22424675 None:intergenic 40.0%
CCATGTCTAAACCACAAGAA+AGG + chr7_4:22424653-22424672 Msa1145560:intron 40.0%
TGTGGTTGTTCGATTCCATT+TGG + chr7_4:22424841-22424860 Msa1145560:intron 40.0%
GTGGTTGTTCGATTCCATTT+GGG + chr7_4:22424842-22424861 Msa1145560:intron 40.0%
GCTCCGTTACAAATCCAAAA+TGG - chr7_4:22424985-22425004 None:intergenic 40.0%
AGCATTCTGACATGGTTGTA+TGG + chr7_4:22425002-22425021 Msa1145560:intron 40.0%
! ATTAGGCGGAAGATTTTCGT+TGG - chr7_4:22425046-22425065 None:intergenic 40.0%
ATCTTCCGCCTAATGTGATA+AGG + chr7_4:22425052-22425071 Msa1145560:CDS 40.0%
AGTTGCCTTATCACATTAGG+CGG - chr7_4:22425060-22425079 None:intergenic 40.0%
GCAAGTTGCCTTATCACATT+AGG - chr7_4:22425063-22425082 None:intergenic 40.0%
GCTCGTTACATAATGTGGAA+GGG - chr7_4:22425211-22425230 None:intergenic 40.0%
AGCTCGTTACATAATGTGGA+AGG - chr7_4:22425212-22425231 None:intergenic 40.0%
CTTGAGCTCGTTACATAATG+TGG - chr7_4:22425216-22425235 None:intergenic 40.0%
GCGATAGTTTCAACTTCATG+CGG - chr7_4:22425299-22425318 None:intergenic 40.0%
CACTGTTGGCAATATTTGGA+TGG - chr7_4:22425607-22425626 None:intergenic 40.0%
CATCCAAATATTGCCAACAG+TGG + chr7_4:22425605-22425624 Msa1145560:CDS 40.0%
TCTCCACTGTTGGCAATATT+TGG - chr7_4:22425611-22425630 None:intergenic 40.0%
TAAGAATATGCCGTAACCCA+AGG - chr7_4:22425673-22425692 None:intergenic 40.0%
CCCATAATCAACAGGTTGTT+AGG + chr7_4:22425796-22425815 Msa1145560:intron 40.0%
!! TCAGCTTTAAATGAACTGGC+TGG + chr7_4:22425846-22425865 Msa1145560:CDS 40.0%
TGTTGATCAGACAAACACCT+CGG + chr7_4:22426168-22426187 Msa1145560:CDS 40.0%
AGAAACATTAGCAGACGACT+CGG - chr7_4:22426311-22426330 None:intergenic 40.0%
AAACAAAAAAAGAGGGGAGG+GGG + chr7_4:22426529-22426548 Msa1145560:three_prime_UTR 40.0%
GGTTTCTGATGGAAAAGCTG+CGG + chr7_4:22423666-22423685 Msa1145560:intron 45.0%
TGCGGCTACAGTCAATCATT+CGG + chr7_4:22423684-22423703 Msa1145560:intron 45.0%
! CTGTCTTTTGCATCAGAGTC+AGG - chr7_4:22423758-22423777 None:intergenic 45.0%
TCTGATACAGGTGAACAGCA+AGG + chr7_4:22423794-22423813 Msa1145560:intron 45.0%
GTGAACAGCAAGGCAAAAAG+AGG + chr7_4:22423804-22423823 Msa1145560:intron 45.0%
CAGCAAGGCAAAAAGAGGAT+TGG + chr7_4:22423809-22423828 Msa1145560:intron 45.0%
TCCATGTGGCAGTCTCTTAT+TGG - chr7_4:22423856-22423875 None:intergenic 45.0%
AACTGCACGACAAACCCAAA+TGG - chr7_4:22424859-22424878 None:intergenic 45.0%
AACTACACGACAAGCCCAAA+TGG - chr7_4:22424922-22424941 None:intergenic 45.0%
! TGTAACGGAGCATTCTGACA+TGG + chr7_4:22424994-22425013 Msa1145560:intron 45.0%
TGTGATAAGGCAACTTGCCA+AGG + chr7_4:22425065-22425084 Msa1145560:CDS 45.0%
AACTTTAATGCCCTCAGGAG+GGG - chr7_4:22425112-22425131 None:intergenic 45.0%
CAACTTTAATGCCCTCAGGA+GGG - chr7_4:22425113-22425132 None:intergenic 45.0%
ACAACTTTAATGCCCTCAGG+AGG - chr7_4:22425114-22425133 None:intergenic 45.0%
ACGACAACTTTAATGCCCTC+AGG - chr7_4:22425117-22425136 None:intergenic 45.0%
CGGAAAACTCCACTCTCATA+AGG - chr7_4:22425279-22425298 None:intergenic 45.0%
TTTCCACACTCTCCTCCTAA+AGG + chr7_4:22425324-22425343 Msa1145560:CDS 45.0%
GACACAAATCTCTCCACTGT+TGG - chr7_4:22425621-22425640 None:intergenic 45.0%
TTGTGTCAACGCGCTCAAAA+AGG + chr7_4:22425634-22425653 Msa1145560:CDS 45.0%
TCAACGCGCTCAAAAAGGAT+TGG + chr7_4:22425639-22425658 Msa1145560:CDS 45.0%
AAGGATTGGAATCCTAGCCT+TGG + chr7_4:22425653-22425672 Msa1145560:CDS 45.0%
! AGGATTGGAATCCTAGCCTT+GGG + chr7_4:22425654-22425673 Msa1145560:CDS 45.0%
CTCAATTACAAGCAGATGCC+GGG - chr7_4:22426048-22426067 None:intergenic 45.0%
CCTCAATTACAAGCAGATGC+CGG - chr7_4:22426049-22426068 None:intergenic 45.0%
CGGCATCTGCTTGTAATTGA+GGG + chr7_4:22426047-22426066 Msa1145560:intron 45.0%
GGCATCTGCTTGTAATTGAG+GGG + chr7_4:22426048-22426067 Msa1145560:intron 45.0%
AAGAGGAACTAGTCAGGATC+AGG + chr7_4:22426267-22426286 Msa1145560:CDS 45.0%
TAATGTTTCTTCTGCTGCCG+CGG + chr7_4:22426321-22426340 Msa1145560:CDS 45.0%
TGCTCATGCACCACAAAAGA+GGG + chr7_4:22426354-22426373 Msa1145560:CDS 45.0%
! GTTCCAATGTCCCTCTTTTG+TGG - chr7_4:22426367-22426386 None:intergenic 45.0%
CATTGGAACTGCTAAAGCTC+AGG + chr7_4:22426378-22426397 Msa1145560:CDS 45.0%
AACAAAAAAAGAGGGGAGGG+GGG + chr7_4:22426530-22426549 Msa1145560:three_prime_UTR 45.0%
!! ACAAATAATAATAAAAATAA+GGG - chr7_4:22426624-22426643 None:intergenic 5.0%
!! AACAAATAATAATAAAAATA+AGG - chr7_4:22426625-22426644 None:intergenic 5.0%
AGAACGTAGCAGTGGCAGAT+CGG - chr7_4:22423353-22423372 None:intergenic 50.0%
GCCAATAAGAGACTGCCACA+TGG + chr7_4:22423852-22423871 Msa1145560:intron 50.0%
CGACTGGGAAAGGAAATGAC+TGG + chr7_4:22424450-22424469 Msa1145560:intron 50.0%
CTTGTGGTTTAGACATGGCG+AGG - chr7_4:22424651-22424670 None:intergenic 50.0%
TTCCATTTGGGCTTGTCGTG+TGG + chr7_4:22424823-22424842 Msa1145560:intron 50.0%
AACCACACGACAAGCCCAAA+TGG - chr7_4:22424828-22424847 None:intergenic 50.0%
! AGGCGGAAGATTTTCGTTGG+TGG - chr7_4:22425043-22425062 None:intergenic 50.0%
TCTTGATGAAACCCCTCCTG+AGG + chr7_4:22425098-22425117 Msa1145560:CDS 50.0%
CTTGATGAAACCCCTCCTGA+GGG + chr7_4:22425099-22425118 Msa1145560:CDS 50.0%
TTTGCTGACATTGAAGGCCC+TGG + chr7_4:22425162-22425181 Msa1145560:CDS 50.0%
GCTGCAACTCCTTATGAGAG+TGG + chr7_4:22425267-22425286 Msa1145560:intron 50.0%
! ACACCTTTAGGAGGAGAGTG+TGG - chr7_4:22425330-22425349 None:intergenic 50.0%
!! GGAATCCTAGCCTTGGGTTA+CGG + chr7_4:22425660-22425679 Msa1145560:CDS 50.0%
ATATGCCGTAACCCAAGGCT+AGG - chr7_4:22425668-22425687 None:intergenic 50.0%
! AGGAGTATGCTAGACATGCC+AGG + chr7_4:22425892-22425911 Msa1145560:CDS 50.0%
TGCCAGGTGAGTTAAGCCAA+TGG + chr7_4:22425908-22425927 Msa1145560:intron 50.0%
!! CACCATTGGCTTAACTCACC+TGG - chr7_4:22425913-22425932 None:intergenic 50.0%
CCGGCATCTGCTTGTAATTG+AGG + chr7_4:22426046-22426065 Msa1145560:intron 50.0%
! GGGCTTTAATTGCGACATGC+AGG + chr7_4:22426068-22426087 Msa1145560:intron 50.0%
! GCGACATGCAGGCTTTTAAC+CGG + chr7_4:22426079-22426098 Msa1145560:intron 50.0%
! GATGTCAGCATTAAGCACCG+AGG - chr7_4:22426188-22426207 None:intergenic 50.0%
GACATCAAAACCATGCCGTC+AGG + chr7_4:22426202-22426221 Msa1145560:CDS 50.0%
ACTAGTTCCTCTTGCTCCAG+TGG - chr7_4:22426260-22426279 None:intergenic 50.0%
TGGAGCAAGAGGAACTAGTC+AGG + chr7_4:22426261-22426280 Msa1145560:CDS 50.0%
TAGTCAGGATCAGGCAGTAG+TGG + chr7_4:22426276-22426295 Msa1145560:CDS 50.0%
AGTCAGGATCAGGCAGTAGT+GGG + chr7_4:22426277-22426296 Msa1145560:CDS 50.0%
ATGAGCAGCAGAAACTACCG+CGG - chr7_4:22426341-22426360 None:intergenic 50.0%
CTGCTCATGCACCACAAAAG+AGG + chr7_4:22426353-22426372 Msa1145560:CDS 50.0%
GCACCACAAAAGAGGGACAT+TGG + chr7_4:22426361-22426380 Msa1145560:CDS 50.0%
GGGGAAGGGATATGGGTAAT+GGG + chr7_4:22426549-22426568 Msa1145560:three_prime_UTR 50.0%
GATCTGCCACTGCTACGTTC+TGG + chr7_4:22423352-22423371 Msa1145560:CDS 55.0%
AGCAGTCCAGAACGTAGCAG+TGG - chr7_4:22423361-22423380 None:intergenic 55.0%
AGACTGCCACATGGACACCA+AGG + chr7_4:22423861-22423880 Msa1145560:intron 55.0%
GACTGCCACATGGACACCAA+GGG + chr7_4:22423862-22423881 Msa1145560:intron 55.0%
GGTTAAGTCCTTGGGTCCCT+TGG - chr7_4:22423881-22423900 None:intergenic 55.0%
GGTGAGCTGAACCTCAGAGA+TGG + chr7_4:22424687-22424706 Msa1145560:intron 55.0%
ATTGGCAGGAGCAGCACCAT+TGG - chr7_4:22425927-22425946 None:intergenic 55.0%
GTTGAGGGCAATGACAGTGG+TGG - chr7_4:22426238-22426257 None:intergenic 55.0%
GTGGTTGAGGGCAATGACAG+TGG - chr7_4:22426241-22426260 None:intergenic 55.0%
CTGTCATTGCCCTCAACCAC+TGG + chr7_4:22426241-22426260 Msa1145560:CDS 55.0%
CCTCTTGCTCCAGTGGTTGA+GGG - chr7_4:22426253-22426272 None:intergenic 55.0%
TCCTCTTGCTCCAGTGGTTG+AGG - chr7_4:22426254-22426273 None:intergenic 55.0%
AAAAAAGAGGGGAGGGGGGA+AGG + chr7_4:22426534-22426553 Msa1145560:three_prime_UTR 55.0%
AAAAAGAGGGGAGGGGGGAA+GGG + chr7_4:22426535-22426554 Msa1145560:three_prime_UTR 55.0%
GGGGGAAGGGATATGGGTAA+TGG + chr7_4:22426548-22426567 Msa1145560:three_prime_UTR 55.0%
!! TGGGTCCCTTGGTGTCCATG+TGG - chr7_4:22423870-22423889 None:intergenic 60.0%
CATGGACACCAAGGGACCCA+AGG + chr7_4:22423870-22423889 Msa1145560:intron 60.0%
CCCTCAACCACTGGAGCAAG+AGG + chr7_4:22426250-22426269 Msa1145560:CDS 60.0%
CAGAGCAGCACCTGACGGCA+TGG - chr7_4:22426215-22426234 None:intergenic 65.0%
GGTGGCAGAGCAGCACCTGA+CGG - chr7_4:22426220-22426239 None:intergenic 65.0%
AGGGGAGGGGGGAAGGGATA+TGG + chr7_4:22426541-22426560 Msa1145560:three_prime_UTR 65.0%
GGGGAGGGGGGAAGGGATAT+GGG + chr7_4:22426542-22426561 Msa1145560:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 22423306 22426736 22423306 ID=Msa1145560;Name=Msa1145560
chr7_4 mRNA 22423306 22426736 22423306 ID=Msa1145560-mRNA-1;Parent=Msa1145560;Name=Msa1145560-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.8|0.66|0.83|1|1|6|286|316
chr7_4 exon 22423306 22423455 22423306 ID=Msa1145560-mRNA-1:exon:5556;Parent=Msa1145560-mRNA-1
chr7_4 exon 22425039 22425183 22425039 ID=Msa1145560-mRNA-1:exon:5557;Parent=Msa1145560-mRNA-1
chr7_4 exon 22425268 22425345 22425268 ID=Msa1145560-mRNA-1:exon:5558;Parent=Msa1145560-mRNA-1
chr7_4 exon 22425582 22425694 22425582 ID=Msa1145560-mRNA-1:exon:5559;Parent=Msa1145560-mRNA-1
chr7_4 exon 22425810 22425913 22425810 ID=Msa1145560-mRNA-1:exon:5560;Parent=Msa1145560-mRNA-1
chr7_4 exon 22426090 22426736 22426090 ID=Msa1145560-mRNA-1:exon:5561;Parent=Msa1145560-mRNA-1
chr7_4 CDS 22423306 22423455 22423306 ID=Msa1145560-mRNA-1:cds;Parent=Msa1145560-mRNA-1
chr7_4 CDS 22425039 22425183 22425039 ID=Msa1145560-mRNA-1:cds;Parent=Msa1145560-mRNA-1
chr7_4 CDS 22425268 22425345 22425268 ID=Msa1145560-mRNA-1:cds;Parent=Msa1145560-mRNA-1
chr7_4 CDS 22425582 22425694 22425582 ID=Msa1145560-mRNA-1:cds;Parent=Msa1145560-mRNA-1
chr7_4 CDS 22425810 22425913 22425810 ID=Msa1145560-mRNA-1:cds;Parent=Msa1145560-mRNA-1
chr7_4 CDS 22426090 22426450 22426090 ID=Msa1145560-mRNA-1:cds;Parent=Msa1145560-mRNA-1
chr7_4 three_prime_UTR 22426451 22426736 22426451 ID=Msa1145560-mRNA-1:three_prime_utr;Parent=Msa1145560-mRNA-1
Gene Sequence

>Msa1145560

ATGGAAAACTTCAAAGGAATATCTTCGAATCTACACGTTTCTAACCGATCTGCCACTGCTACGTTCTGGACTGCTACGTTTCTAAACGAATCTACACGTTCTGGACTACACGCTCACGAACACCAATTCCGATCTACACGTTTTTGCCTTGCCACCAACGAAAATCTTCCGCCTAATGTGATAAGGCAACTTGCCAAGGAGTTGAAAAATCTTGATGAAACCCCTCCTGAGGGCATTAAAGTTGTCGTGAATGATGATGATTTTTCAACAATTTTTGCTGACATTGAAGGCCCTGCTGCAACTCCTTATGAGAGTGGAGTTTTCCGCATGAAGTTGAAACTATCGCATGATTTTCCACACTCTCCTCCTAAAGGATATTTCTTGACCAAGATTTTCCATCCAAATATTGCCAACAGTGGAGAGATTTGTGTCAACGCGCTCAAAAAGGATTGGAATCCTAGCCTTGGGTTACGGCATATTCTTATCGTTGTTAGGTGTCTATTGATTGAACCGTTTCCAGAATCAGCTTTAAATGAACTGGCTGGTAAACTACTGCTTGAAAATTATGAGGAGTATGCTAGACATGCCAGGCTTTTAACCGGAATCCATGCAAAATCAAAGCCGAAATTCAAAAGTGGAGCTATAACCGAATCAACTACTGCTCTGAATGTTGATCAGACAAACACCTCGGTGCTTAATGCTGACATCAAAACCATGCCGTCAGGTGCTGCTCTGCCACCACTGTCATTGCCCTCAACCACTGGAGCAAGAGGAACTAGTCAGGATCAGGCAGTAGTGGGCGTTCTGACCGAGTCGTCTGCTAATGTTTCTTCTGCTGCCGCGGTAGTTTCTGCTGCTCATGCACCACAAAAGAGGGACATTGGAACTGCTAAAGCTCAGGCAGACAAGAAGAAGCTAGATGCTAGAAAGAAAAGTTTGAAAAGATTGTGA
Protein sequence

>Msa1145560

MENFKGISSNLHVSNRSATATFWTATFLNESTRSGLHAHEHQFRSTRFCLATNENLPPNVIRQLAKELKNLDETPPEGIKVVVNDDDFSTIFADIEGPAATPYESGVFRMKLKLSHDFPHSPPKGYFLTKIFHPNIANSGEICVNALKKDWNPSLGLRHILIVVRCLLIEPFPESALNELAGKLLLENYEEYARHARLLTGIHAKSKPKFKSGAITESTTALNVDQTNTSVLNADIKTMPSGAALPPLSLPSTTGARGTSQDQAVVGVLTESSANVSSAAAVVSAAHAPQKRDIGTAKAQADKKKLDARKKSLKRL*