Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296950 | XP_013446428.1 | 97.289 | 627 | 16 | 1 | 1 | 627 | 1 | 626 | 0.0 | 1267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296950 | G7ZYV9 | 97.289 | 627 | 16 | 1 | 1 | 627 | 1 | 626 | 0.0 | 1267 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa1296950 | 0.838954 | 2.115115e-57 | -8.615850e-47 |
| Msa0025160 | Msa1296950 | 0.811911 | 5.525405e-51 | -8.615850e-47 |
| Msa0025580 | Msa1296950 | 0.808832 | 2.551331e-50 | -8.615850e-47 |
| Msa0034210 | Msa1296950 | 0.820388 | 7.041550e-53 | -8.615850e-47 |
| Msa0036870 | Msa1296950 | 0.805142 | 1.539826e-49 | -8.615850e-47 |
| Msa0050660 | Msa1296950 | 0.824162 | 9.369495e-54 | -8.615850e-47 |
| Msa0050700 | Msa1296950 | 0.821429 | 4.057524e-53 | -8.615850e-47 |
| Msa0050790 | Msa1296950 | 0.819783 | 9.687805e-53 | -8.615850e-47 |
| Msa0071860 | Msa1296950 | 0.803762 | 2.985889e-49 | -8.615850e-47 |
| Msa0073120 | Msa1296950 | 0.804695 | 1.909306e-49 | -8.615850e-47 |
| Msa0090400 | Msa1296950 | 0.842740 | 2.150062e-58 | -8.615850e-47 |
| Msa0621710 | Msa1296950 | 0.811088 | 8.339860e-51 | -8.615850e-47 |
| Msa0666700 | Msa1296950 | 0.801906 | 7.216956e-49 | -8.615850e-47 |
| Msa0675330 | Msa1296950 | 0.807438 | 5.054917e-50 | -8.615850e-47 |
| Msa0700460 | Msa1296950 | 0.855763 | 5.070786e-62 | -8.615850e-47 |
| Msa0701720 | Msa1296950 | 0.800161 | 1.640745e-48 | -8.615850e-47 |
| Msa0758650 | Msa1296950 | 0.806015 | 1.009913e-49 | -8.615850e-47 |
| Msa0778550 | Msa1296950 | 0.805747 | 1.149739e-49 | -8.615850e-47 |
| Msa0835490 | Msa1296950 | 0.804507 | 2.089975e-49 | -8.615850e-47 |
| Msa0121330 | Msa1296950 | 0.818185 | 2.236641e-52 | -8.615850e-47 |
| Msa0128310 | Msa1296950 | 0.828362 | 9.378220e-55 | -8.615850e-47 |
| Msa0137880 | Msa1296950 | 0.835792 | 1.365129e-56 | -8.615850e-47 |
| Msa0140280 | Msa1296950 | 0.811023 | 8.611405e-51 | -8.615850e-47 |
| Msa0161930 | Msa1296950 | 0.834816 | 2.407594e-56 | -8.615850e-47 |
| Msa0174440 | Msa1296950 | 0.828143 | 1.058770e-54 | -8.615850e-47 |
| Msa0188610 | Msa1296950 | 0.845134 | 4.907340e-59 | -8.615850e-47 |
| Msa0200050 | Msa1296950 | 0.822329 | 2.510416e-53 | -8.615850e-47 |
| Msa0213030 | Msa1296950 | 0.805068 | 1.595807e-49 | -8.615850e-47 |
| Msa0230800 | Msa1296950 | 0.847893 | 8.666209e-60 | -8.615850e-47 |
| Msa0230870 | Msa1296950 | 0.843112 | 1.711543e-58 | -8.615850e-47 |
| Msa1240770 | Msa1296950 | 0.822204 | 2.684719e-53 | -8.615850e-47 |
| Msa1265650 | Msa1296950 | 0.837061 | 6.491412e-57 | -8.615850e-47 |
| Msa1296950 | Msa1303560 | 0.817361 | 3.432432e-52 | -8.615850e-47 |
| Msa1296950 | Msa1303650 | 0.827188 | 1.796120e-54 | -8.615850e-47 |
| Msa1296950 | Msa1315130 | 0.817905 | 2.587094e-52 | -8.615850e-47 |
| Msa1296950 | Msa1315160 | 0.845409 | 4.135939e-59 | -8.615850e-47 |
| Msa1296950 | Msa1321340 | 0.812715 | 3.687571e-51 | -8.615850e-47 |
| Msa1296950 | Msa1372040 | 0.802892 | 4.522644e-49 | -8.615850e-47 |
| Msa1296950 | Msa1384460 | 0.800667 | 1.294326e-48 | -8.615850e-47 |
| Msa1296950 | Msa1393780 | 0.831808 | 1.352786e-55 | -8.615850e-47 |
| Msa1296950 | Msa1415540 | 0.807267 | 5.494072e-50 | -8.615850e-47 |
| Msa1296950 | Msa1440630 | 0.815771 | 7.795306e-52 | -8.615850e-47 |
| Msa1296950 | Msa1452140 | 0.819244 | 1.285803e-52 | -8.615850e-47 |
| Msa0380670 | Msa1296950 | 0.815854 | 7.469948e-52 | -8.615850e-47 |
| Msa0430300 | Msa1296950 | 0.813070 | 3.082533e-51 | -8.615850e-47 |
| Msa0436910 | Msa1296950 | 0.850773 | 1.366794e-60 | -8.615850e-47 |
| Msa0447750 | Msa1296950 | 0.815293 | 9.959616e-52 | -8.615850e-47 |
| Msa1003800 | Msa1296950 | 0.807649 | 4.558328e-50 | -8.615850e-47 |
| Msa1003930 | Msa1296950 | 0.804211 | 2.409208e-49 | -8.615850e-47 |
| Msa1009950 | Msa1296950 | 0.804620 | 1.979184e-49 | -8.615850e-47 |
| Msa1021590 | Msa1296950 | 0.812248 | 4.664708e-51 | -8.615850e-47 |
| Msa1029530 | Msa1296950 | 0.811929 | 5.473676e-51 | -8.615850e-47 |
| Msa1034600 | Msa1296950 | 0.812027 | 5.211102e-51 | -8.615850e-47 |
| Msa1042160 | Msa1296950 | 0.812817 | 3.502300e-51 | -8.615850e-47 |
| Msa1042190 | Msa1296950 | 0.819494 | 1.128006e-52 | -8.615850e-47 |
| Msa1044680 | Msa1296950 | 0.807221 | 5.620168e-50 | -8.615850e-47 |
| Msa1051840 | Msa1296950 | 0.820311 | 7.333056e-53 | -8.615850e-47 |
| Msa1078820 | Msa1296950 | 0.851171 | 1.056011e-60 | -8.615850e-47 |
| Msa1078880 | Msa1296950 | 0.829266 | 5.666944e-55 | -8.615850e-47 |
| Msa1078970 | Msa1296950 | 0.833511 | 5.114394e-56 | -8.615850e-47 |
| Msa1081690 | Msa1296950 | 0.834499 | 2.893622e-56 | -8.615850e-47 |
| Msa1096960 | Msa1296950 | 0.817579 | 3.064892e-52 | -8.615850e-47 |
| Msa1105640 | Msa1296950 | 0.807630 | 4.601070e-50 | -8.615850e-47 |
| Msa0242590 | Msa1296950 | 0.800581 | 1.347797e-48 | -8.615850e-47 |
| Msa0267110 | Msa1296950 | 0.807857 | 4.117605e-50 | -8.615850e-47 |
| Msa0270340 | Msa1296950 | 0.830812 | 2.379013e-55 | -8.615850e-47 |
| Msa0280790 | Msa1296950 | 0.802099 | 6.588517e-49 | -8.615850e-47 |
| Msa1121310 | Msa1296950 | 0.808224 | 3.439557e-50 | -8.615850e-47 |
| Msa1123970 | Msa1296950 | 0.856218 | 3.732402e-62 | -8.615850e-47 |
| Msa1167470 | Msa1296950 | 0.811730 | 6.048776e-51 | -8.615850e-47 |
| Msa1169190 | Msa1296950 | 0.830169 | 3.416912e-55 | -8.615850e-47 |
| Msa1169650 | Msa1296950 | 0.848663 | 5.309474e-60 | -8.615850e-47 |
| Msa1186520 | Msa1296950 | 0.802910 | 4.482896e-49 | -8.615850e-47 |
| Msa1203300 | Msa1296950 | 0.861275 | 1.150679e-63 | -8.615850e-47 |
| Msa1208950 | Msa1296950 | 0.813827 | 2.102028e-51 | -8.615850e-47 |
| Msa1216110 | Msa1296950 | 0.802979 | 4.338321e-49 | -8.615850e-47 |
| Msa0483910 | Msa1296950 | 0.808180 | 3.515780e-50 | -8.615850e-47 |
| Msa0495550 | Msa1296950 | 0.814317 | 1.638448e-51 | -8.615850e-47 |
| Msa0517250 | Msa1296950 | 0.820286 | 7.433673e-53 | -8.615850e-47 |
| Msa0528570 | Msa1296950 | 0.807808 | 4.219116e-50 | -8.615850e-47 |
| Msa0531960 | Msa1296950 | 0.800616 | 1.325675e-48 | -8.615850e-47 |
| Msa0541300 | Msa1296950 | 0.822192 | 2.701931e-53 | -8.615850e-47 |
| Msa0541310 | Msa1296950 | 0.815268 | 1.008559e-51 | -8.615850e-47 |
| Msa0563940 | Msa1296950 | 0.846306 | 2.360102e-59 | -8.615850e-47 |
| Msa0570010 | Msa1296950 | 0.820729 | 5.881272e-53 | -8.615850e-47 |
| Msa0585020 | Msa1296950 | 0.805991 | 1.021811e-49 | -8.615850e-47 |
| Msa0597270 | Msa1296950 | 0.816493 | 5.376046e-52 | -8.615850e-47 |
| Msa0931590 | Msa1296950 | 0.819005 | 1.457569e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296950 | MtrunA17_Chr8g0373901 | 97.289 | 627 | 16 | 1 | 1 | 627 | 1 | 626 | 0.0 | 1267 |
| Msa1296950 | MtrunA17_Chr5g0403231 | 67.829 | 631 | 177 | 13 | 5 | 627 | 12 | 624 | 0.0 | 803 |
| Msa1296950 | MtrunA17_Chr4g0034351 | 42.081 | 644 | 304 | 16 | 11 | 626 | 15 | 617 | 2.18e-146 | 437 |
| Msa1296950 | MtrunA17_Chr5g0399331 | 29.217 | 575 | 330 | 12 | 61 | 626 | 74 | 580 | 3.46e-68 | 232 |
| Msa1296950 | MtrunA17_Chr8g0374741 | 28.381 | 451 | 284 | 7 | 178 | 621 | 177 | 595 | 1.33e-40 | 156 |
| Msa1296950 | MtrunA17_Chr5g0435281 | 30.372 | 349 | 212 | 8 | 297 | 625 | 176 | 513 | 2.63e-39 | 151 |
| Msa1296950 | MtrunA17_Chr5g0402501 | 29.940 | 334 | 193 | 7 | 295 | 621 | 245 | 544 | 3.37e-38 | 149 |
| Msa1296950 | MtrunA17_Chr1g0153951 | 31.722 | 331 | 196 | 8 | 300 | 621 | 236 | 545 | 1.60e-36 | 144 |
| Msa1296950 | MtrunA17_Chr4g0028651 | 30.312 | 353 | 201 | 10 | 300 | 621 | 355 | 693 | 1.62e-36 | 145 |
| Msa1296950 | MtrunA17_Chr3g0133631 | 30.678 | 339 | 190 | 8 | 297 | 621 | 261 | 568 | 1.88e-35 | 141 |
| Msa1296950 | MtrunA17_Chr3g0115381 | 30.303 | 231 | 149 | 4 | 392 | 619 | 536 | 757 | 6.34e-23 | 103 |
| Msa1296950 | MtrunA17_Chr8g0351061 | 32.778 | 180 | 110 | 3 | 399 | 575 | 408 | 579 | 4.26e-21 | 97.8 |
| Msa1296950 | MtrunA17_Chr1g0163291 | 32.222 | 180 | 110 | 4 | 399 | 575 | 386 | 556 | 8.80e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296950 | AT5G66600.14 | 56.260 | 631 | 230 | 15 | 10 | 627 | 17 | 614 | 0.0 | 636 |
| Msa1296950 | AT5G66600.1 | 56.260 | 631 | 230 | 15 | 10 | 627 | 17 | 614 | 0.0 | 636 |
| Msa1296950 | AT5G66600.4 | 56.260 | 631 | 230 | 15 | 10 | 627 | 17 | 614 | 0.0 | 636 |
| Msa1296950 | AT5G66600.9 | 56.260 | 631 | 230 | 15 | 10 | 627 | 17 | 614 | 0.0 | 636 |
| Msa1296950 | AT5G66600.3 | 56.260 | 631 | 230 | 15 | 10 | 627 | 17 | 614 | 0.0 | 636 |
| Msa1296950 | AT5G66600.2 | 56.592 | 622 | 226 | 14 | 17 | 627 | 6 | 594 | 0.0 | 633 |
| Msa1296950 | AT5G66600.7 | 57.831 | 581 | 208 | 12 | 56 | 627 | 8 | 560 | 0.0 | 616 |
| Msa1296950 | AT5G66600.12 | 55.094 | 530 | 196 | 13 | 10 | 529 | 17 | 514 | 1.71e-176 | 511 |
| Msa1296950 | AT5G66600.11 | 55.094 | 530 | 196 | 13 | 10 | 529 | 17 | 514 | 1.71e-176 | 511 |
| Msa1296950 | AT5G66600.6 | 55.094 | 530 | 196 | 13 | 10 | 529 | 17 | 514 | 1.71e-176 | 511 |
| Msa1296950 | AT5G66600.13 | 55.094 | 530 | 196 | 13 | 10 | 529 | 17 | 514 | 1.71e-176 | 511 |
| Msa1296950 | AT5G66600.10 | 53.061 | 490 | 189 | 12 | 10 | 489 | 17 | 475 | 3.65e-152 | 448 |
| Msa1296950 | AT5G66600.8 | 53.061 | 490 | 189 | 12 | 10 | 489 | 17 | 475 | 3.65e-152 | 448 |
| Msa1296950 | AT5G66600.5 | 53.061 | 490 | 189 | 12 | 10 | 489 | 17 | 475 | 3.65e-152 | 448 |
| Msa1296950 | AT2G23700.1 | 54.324 | 451 | 178 | 9 | 182 | 627 | 280 | 707 | 6.13e-151 | 452 |
| Msa1296950 | AT2G23700.1 | 46.927 | 179 | 84 | 5 | 5 | 176 | 1 | 175 | 1.92e-28 | 121 |
| Msa1296950 | AT5G66600.15 | 54.773 | 440 | 167 | 9 | 56 | 489 | 8 | 421 | 3.35e-145 | 429 |
| Msa1296950 | AT3G18900.4 | 38.869 | 548 | 239 | 12 | 80 | 621 | 73 | 530 | 1.47e-106 | 332 |
| Msa1296950 | AT3G18900.5 | 38.869 | 548 | 239 | 12 | 80 | 621 | 68 | 525 | 1.63e-106 | 332 |
| Msa1296950 | AT3G18900.6 | 39.464 | 522 | 221 | 12 | 105 | 621 | 18 | 449 | 9.27e-106 | 327 |
| Msa1296950 | AT3G18900.3 | 39.464 | 522 | 221 | 12 | 105 | 621 | 18 | 449 | 9.27e-106 | 327 |
| Msa1296950 | AT5G47380.1 | 29.348 | 644 | 348 | 16 | 13 | 627 | 27 | 592 | 2.84e-74 | 250 |
| Msa1296950 | AT5G47380.5 | 30.324 | 587 | 312 | 13 | 60 | 627 | 28 | 536 | 3.14e-74 | 248 |
| Msa1296950 | AT5G47380.4 | 29.348 | 644 | 348 | 16 | 13 | 627 | 27 | 592 | 3.46e-74 | 249 |
| Msa1296950 | AT3G18900.1 | 37.225 | 454 | 191 | 11 | 80 | 529 | 73 | 436 | 2.18e-72 | 241 |
| Msa1296950 | AT1G76620.1 | 38.038 | 418 | 220 | 12 | 234 | 626 | 118 | 521 | 5.52e-72 | 241 |
| Msa1296950 | AT1G21060.2 | 38.567 | 363 | 201 | 6 | 263 | 624 | 153 | 494 | 5.59e-66 | 225 |
| Msa1296950 | AT1G21060.1 | 39.244 | 344 | 189 | 5 | 282 | 624 | 182 | 506 | 6.87e-66 | 225 |
| Msa1296950 | AT1G43020.1 | 36.599 | 347 | 173 | 5 | 282 | 627 | 140 | 440 | 3.46e-64 | 218 |
| Msa1296950 | AT3G18900.2 | 34.719 | 409 | 173 | 11 | 80 | 484 | 73 | 391 | 1.86e-52 | 185 |
| Msa1296950 | AT5G47380.2 | 29.098 | 543 | 284 | 15 | 13 | 532 | 27 | 491 | 2.82e-51 | 185 |
| Msa1296950 | AT3G13000.1 | 33.239 | 352 | 201 | 8 | 300 | 621 | 198 | 545 | 7.23e-48 | 176 |
| Msa1296950 | AT3G13000.3 | 33.239 | 352 | 201 | 8 | 300 | 621 | 227 | 574 | 2.07e-47 | 176 |
| Msa1296950 | AT3G13000.2 | 33.239 | 352 | 201 | 8 | 300 | 621 | 227 | 574 | 2.07e-47 | 176 |
| Msa1296950 | AT1G16750.1 | 31.755 | 359 | 205 | 10 | 297 | 621 | 175 | 527 | 1.26e-44 | 167 |
| Msa1296950 | AT5G47380.3 | 34.979 | 243 | 122 | 3 | 293 | 527 | 272 | 486 | 8.79e-41 | 155 |
| Msa1296950 | AT1G76620.2 | 35.625 | 320 | 168 | 11 | 234 | 529 | 118 | 423 | 2.50e-40 | 153 |
| Msa1296950 | AT5G42690.3 | 32.628 | 331 | 184 | 10 | 300 | 621 | 186 | 486 | 5.65e-39 | 150 |
| Msa1296950 | AT5G42690.5 | 32.628 | 331 | 184 | 10 | 300 | 621 | 211 | 511 | 9.34e-39 | 150 |
| Msa1296950 | AT5G42690.1 | 32.628 | 331 | 184 | 10 | 300 | 621 | 237 | 537 | 9.55e-39 | 150 |
| Msa1296950 | AT5G42690.2 | 32.628 | 331 | 184 | 10 | 300 | 621 | 238 | 538 | 1.02e-38 | 150 |
| Msa1296950 | AT5G42690.4 | 32.628 | 331 | 184 | 10 | 300 | 621 | 238 | 538 | 1.02e-38 | 150 |
| Msa1296950 | AT1G43020.3 | 35.547 | 256 | 118 | 5 | 282 | 537 | 140 | 348 | 3.00e-38 | 145 |
| Msa1296950 | AT4G37080.1 | 30.473 | 338 | 171 | 7 | 299 | 621 | 307 | 595 | 1.76e-37 | 147 |
| Msa1296950 | AT4G37080.2 | 30.473 | 338 | 171 | 7 | 299 | 621 | 320 | 608 | 1.77e-37 | 148 |
| Msa1296950 | AT4G37080.3 | 30.473 | 338 | 171 | 7 | 299 | 621 | 320 | 608 | 1.77e-37 | 148 |
| Msa1296950 | AT3G12540.2 | 29.380 | 371 | 230 | 10 | 266 | 621 | 150 | 503 | 2.18e-35 | 140 |
| Msa1296950 | AT3G12540.1 | 29.301 | 372 | 229 | 11 | 266 | 621 | 217 | 570 | 3.86e-35 | 140 |
| Msa1296950 | AT5G60720.1 | 29.692 | 357 | 208 | 11 | 300 | 621 | 341 | 689 | 7.15e-32 | 132 |
| Msa1296950 | AT2G39690.8 | 28.571 | 336 | 209 | 8 | 300 | 621 | 178 | 496 | 1.43e-30 | 126 |
| Msa1296950 | AT2G39690.1 | 28.571 | 336 | 209 | 8 | 300 | 621 | 204 | 522 | 1.88e-30 | 126 |
| Msa1296950 | AT2G39690.2 | 28.571 | 336 | 210 | 8 | 300 | 621 | 97 | 416 | 3.16e-30 | 124 |
| Msa1296950 | AT2G39690.4 | 28.698 | 338 | 207 | 9 | 300 | 621 | 178 | 497 | 4.09e-30 | 124 |
| Msa1296950 | AT2G39690.5 | 28.698 | 338 | 207 | 9 | 300 | 621 | 204 | 523 | 5.67e-30 | 124 |
| Msa1296950 | AT1G16750.2 | 32.159 | 227 | 125 | 7 | 297 | 499 | 175 | 396 | 2.34e-26 | 112 |
| Msa1296950 | AT4G08550.1 | 28.571 | 224 | 148 | 5 | 395 | 615 | 419 | 633 | 2.93e-21 | 98.6 |
| Msa1296950 | AT4G08550.2 | 28.571 | 224 | 148 | 5 | 395 | 615 | 473 | 687 | 3.93e-21 | 98.6 |
| Msa1296950 | AT1G43020.4 | 32.804 | 189 | 76 | 4 | 282 | 464 | 140 | 283 | 5.44e-19 | 88.2 |
| Msa1296950 | AT1G43020.5 | 32.804 | 189 | 76 | 4 | 282 | 464 | 140 | 283 | 9.35e-19 | 88.2 |
| Msa1296950 | AT1G43020.2 | 32.804 | 189 | 76 | 4 | 282 | 464 | 140 | 283 | 9.35e-19 | 88.2 |
| Msa1296950 | AT2G39690.7 | 29.004 | 231 | 152 | 5 | 300 | 529 | 204 | 423 | 2.65e-17 | 85.1 |
| Msa1296950 | AT3G11920.1 | 33.540 | 161 | 97 | 4 | 416 | 573 | 430 | 583 | 3.51e-17 | 85.9 |
| Msa1296950 | AT2G39690.6 | 28.755 | 233 | 151 | 6 | 300 | 529 | 204 | 424 | 7.91e-17 | 84.0 |
| Msa1296950 | AT4G37080.4 | 28.631 | 241 | 113 | 6 | 299 | 529 | 320 | 511 | 8.81e-16 | 80.9 |
| Msa1296950 | AT2G39690.3 | 29.775 | 178 | 121 | 3 | 300 | 476 | 178 | 352 | 6.10e-15 | 77.4 |
Find 155 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCTTATTAGCTGTTTC+TGG | 0.133513 | 8_3:+56800050 | None:intergenic |
| AGAGTTAGAAGTTGTATATT+TGG | 0.184488 | 8_3:-56800740 | Msa1296950:CDS |
| TCCTTCACTGTTTCCTTATC+AGG | 0.197617 | 8_3:+56802146 | None:intergenic |
| ATAATAGTTGTTATGTTCTT+AGG | 0.218213 | 8_3:-56802762 | Msa1296950:intron |
| GATACATTCTCCAGAGATTC+AGG | 0.247612 | 8_3:-56798523 | Msa1296950:CDS |
| CTGGAATATGATCACATATT+CGG | 0.260667 | 8_3:+56800069 | None:intergenic |
| AACAGTTGCTCCAGAATTTC+AGG | 0.263889 | 8_3:-56799749 | Msa1296950:CDS |
| TGTACAATGTATTCTTTATC+TGG | 0.269728 | 8_3:+56800475 | None:intergenic |
| CTTCACTTTGCACTTTGTTC+AGG | 0.277336 | 8_3:-56798902 | Msa1296950:CDS |
| ACACTCTTTCTCAGGGATTC+AGG | 0.278846 | 8_3:+56798457 | None:intergenic |
| TTGCTGTAGATGTTGAATAT+TGG | 0.297690 | 8_3:+56800395 | None:intergenic |
| CTTGCTCTAGGTGTTGTTAC+AGG | 0.300352 | 8_3:+56800616 | None:intergenic |
| AAGACTAGAAGACCAATTTA+AGG | 0.302009 | 8_3:-56801261 | Msa1296950:CDS |
| TAATAAGCTTTCTGAGGATA+TGG | 0.308473 | 8_3:-56800039 | Msa1296950:CDS |
| GAGAATGTATCTACAATCTT+AGG | 0.309041 | 8_3:+56798535 | None:intergenic |
| TGTCGAACATTATTATTCAT+AGG | 0.324408 | 8_3:+56801442 | None:intergenic |
| TGCTGTAGATGTTGAATATT+GGG | 0.327313 | 8_3:+56800396 | None:intergenic |
| ATTTGGATTAACAAGAGATA+TGG | 0.335609 | 8_3:+56801202 | None:intergenic |
| ACGAGGAGAAGTTAGCTTTC+TGG | 0.336440 | 8_3:-56799680 | Msa1296950:CDS |
| TGGGGTATTGTCGTGTCATT+TGG | 0.343001 | 8_3:+56801185 | None:intergenic |
| GTTGTTGTTCAAATGCTTTA+CGG | 0.343548 | 8_3:+56800695 | None:intergenic |
| ATTTCTTAACACTCTTTCTC+AGG | 0.352274 | 8_3:+56798449 | None:intergenic |
| TACAGGCTGCATATAATGTT+GGG | 0.354407 | 8_3:-56799393 | Msa1296950:intron |
| ATATGGCAGCTTTCCTGATA+AGG | 0.364165 | 8_3:-56802159 | Msa1296950:intron |
| TCCTCGTGTTTCAACTTCCC+TGG | 0.365491 | 8_3:+56799696 | None:intergenic |
| AAGAGTCTTTCTTCTCTTGA+AGG | 0.368777 | 8_3:-56799502 | Msa1296950:intron |
| ACCTCAACCATGGTGCTATA+TGG | 0.372022 | 8_3:+56799813 | None:intergenic |
| TTGTTGCACAGTGTCATTAG+TGG | 0.377201 | 8_3:-56802866 | Msa1296950:intron |
| TTGATCTGGTTCCAGGATAC+AGG | 0.384119 | 8_3:-56801505 | Msa1296950:intron |
| AAGAAATGTCATGCAAAATC+CGG | 0.384303 | 8_3:-56798433 | Msa1296950:CDS |
| AATCCATTCTATGCTCTTCC+CGG | 0.388268 | 8_3:+56798414 | None:intergenic |
| AAATAAGTGACCTGAAATTC+TGG | 0.390317 | 8_3:+56799739 | None:intergenic |
| ACAATACAAAATACTATACT+AGG | 0.390880 | 8_3:-56799349 | Msa1296950:CDS |
| GATAATCCTTTCAACGTTGA+AGG | 0.391580 | 8_3:-56799855 | Msa1296950:CDS |
| AAGTGGAAAATAAACCAAAA+AGG | 0.393123 | 8_3:+56803075 | None:intergenic |
| GAAAGGCCCGGATTAGTTAT+AGG | 0.396919 | 8_3:+56799975 | None:intergenic |
| GGACAAGGGTTGAGAATAAC+AGG | 0.398493 | 8_3:+56800330 | None:intergenic |
| TTGTCTACTGTAACAGATCC+TGG | 0.402270 | 8_3:-56798105 | Msa1296950:three_prime_UTR |
| TATTCTTTATCTGGAGTCTC+AGG | 0.406473 | 8_3:+56800484 | None:intergenic |
| TGGAATATGATCACATATTC+GGG | 0.406975 | 8_3:+56800070 | None:intergenic |
| AAAGGCACTTATCGAAGTAC+TGG | 0.408182 | 8_3:+56799947 | None:intergenic |
| ATGTGCATCGGACCTTAAAT+TGG | 0.409450 | 8_3:+56801249 | None:intergenic |
| AGTTCTTGAAACACTCTCTT+CGG | 0.410304 | 8_3:+56798625 | None:intergenic |
| AAAATTAAAACAATCTCAAC+TGG | 0.414279 | 8_3:+56798211 | None:intergenic |
| CAATTAGAAGACGTAGATCC+AGG | 0.416290 | 8_3:-56799714 | Msa1296950:CDS |
| TTCAAATGCTTTACGGTACA+AGG | 0.416852 | 8_3:+56800702 | None:intergenic |
| GTCGAACATTATTATTCATA+GGG | 0.417240 | 8_3:+56801443 | None:intergenic |
| CTTCTTCTCTCAAGTCACCT+TGG | 0.420588 | 8_3:-56803108 | Msa1296950:five_prime_UTR |
| AATTATTTAACCAGCTCCTT+AGG | 0.423672 | 8_3:+56798361 | None:intergenic |
| TTGAGGGTAGTGATAGAGTA+AGG | 0.428129 | 8_3:+56803033 | None:intergenic |
| TTCTCAACCCTTGTCCATGA+TGG | 0.428216 | 8_3:-56800323 | Msa1296950:CDS |
| GATGCAGATGCAGCCACGGC+GGG | 0.428257 | 8_3:+56800667 | None:intergenic |
| CTCTTTGAACGATTATGCCT+TGG | 0.428577 | 8_3:+56802596 | None:intergenic |
| CAAGGCGACACGTGGAGTCC+AGG | 0.433939 | 8_3:-56799912 | Msa1296950:CDS |
| TTCTTTGAAGATAGTGAAGT+TGG | 0.447899 | 8_3:-56803147 | Msa1296950:five_prime_UTR |
| TACCCTCAACAAACCTCAAA+AGG | 0.450571 | 8_3:-56803019 | Msa1296950:intron |
| TTTGGATTAACAAGAGATAT+GGG | 0.457433 | 8_3:+56801203 | None:intergenic |
| ATGAGACAAACCTGAATCTC+TGG | 0.457890 | 8_3:+56798513 | None:intergenic |
| GAGTACATTAGAGCCACGTT+TGG | 0.459510 | 8_3:-56798586 | Msa1296950:CDS |
| AGACCCACCTATAACTAATC+CGG | 0.459828 | 8_3:-56799982 | Msa1296950:CDS |
| TTCTTGTTTATTCAGAAATG+AGG | 0.460267 | 8_3:+56802784 | None:intergenic |
| TCTTTGATTAATTCTGTGGT+TGG | 0.461028 | 8_3:+56800775 | None:intergenic |
| TGAGATTCATACACTTCAAA+AGG | 0.462070 | 8_3:-56800524 | Msa1296950:CDS |
| CCGAATGTCTCGTCCTGGAC+AGG | 0.462864 | 8_3:-56799323 | Msa1296950:intron |
| TTTCAACGTTGAAGGATTCA+AGG | 0.464834 | 8_3:-56799847 | Msa1296950:CDS |
| GTAGTCAATCAAATGCCAAT+TGG | 0.466958 | 8_3:-56797964 | Msa1296950:three_prime_UTR |
| TTGAATCCTTCAACGTTGAA+AGG | 0.468691 | 8_3:+56799849 | None:intergenic |
| AATGTCTTTGATTAATTCTG+TGG | 0.470476 | 8_3:+56800771 | None:intergenic |
| TGCAGATGCAGCCACGGCGG+GGG | 0.472343 | 8_3:+56800669 | None:intergenic |
| CCTCGGGTGGAGAAACTTGA+AGG | 0.472533 | 8_3:+56800590 | None:intergenic |
| TTACAGGCTGCATATAATGT+TGG | 0.475584 | 8_3:-56799394 | Msa1296950:intron |
| AGTACATTAGAGCCACGTTT+GGG | 0.481357 | 8_3:-56798585 | Msa1296950:CDS |
| GAAGGATTCAAGGAGTTTAG+TGG | 0.483934 | 8_3:-56799837 | Msa1296950:CDS |
| GAAGTTCAAAGAAATCCAAT+TGG | 0.484909 | 8_3:+56797949 | None:intergenic |
| TCGAAGACAAAATTCAAAGC+TGG | 0.492088 | 8_3:-56798968 | Msa1296950:CDS |
| TTCTGCTAGACTGATTACTT+TGG | 0.492321 | 8_3:+56800103 | None:intergenic |
| ACACTTCAAAAGGAATGTAA+TGG | 0.493365 | 8_3:-56800514 | Msa1296950:CDS |
| ACAAAATTCAAAGCTGGAGA+TGG | 0.496463 | 8_3:-56798962 | Msa1296950:CDS |
| ATTGTATGTTCCACCTGTCC+AGG | 0.497922 | 8_3:+56799310 | None:intergenic |
| GATTCAGGTTTGTCTCATGC+TGG | 0.501846 | 8_3:-56798508 | Msa1296950:CDS |
| GAGCTGGTTAAATAATTACT+TGG | 0.505790 | 8_3:-56798355 | Msa1296950:exon |
| GACTTGAAGGTTTGATTCCA+AGG | 0.509105 | 8_3:-56802613 | Msa1296950:CDS |
| GCCATATAGCACCATGGTTG+AGG | 0.515583 | 8_3:-56799814 | Msa1296950:CDS |
| GCCTTGATCGCCAATAGAAA+AGG | 0.516651 | 8_3:+56799929 | None:intergenic |
| ATCTAACTGTACATCAAAAG+AGG | 0.517517 | 8_3:+56799875 | None:intergenic |
| GAGGAGTTATTTCTTAACCC+TGG | 0.518333 | 8_3:+56799894 | None:intergenic |
| GGGATTCAGGTAGAGACTGT+TGG | 0.520236 | 8_3:+56798470 | None:intergenic |
| TTATAAAGAGAATCAGAAGT+TGG | 0.520246 | 8_3:-56799781 | Msa1296950:CDS |
| CCTGTCCAGGACGAGACATT+CGG | 0.522899 | 8_3:+56799323 | None:intergenic |
| AATGTCAAAACACCTAAAAG+TGG | 0.523666 | 8_3:+56803058 | None:intergenic |
| GCAAAGTGAAGAAGAGACTC+AGG | 0.524963 | 8_3:+56798914 | None:intergenic |
| GGGTGCCGAATGTCTCGTCC+TGG | 0.527623 | 8_3:-56799328 | Msa1296950:CDS |
| TGATTCTCTTTATAAATCCA+CGG | 0.529330 | 8_3:+56799789 | None:intergenic |
| TATTGTGAAATCTGAACCAT+CGG | 0.534757 | 8_3:-56798175 | Msa1296950:three_prime_UTR |
| TGAGACCATCTGCAAATGTT+TGG | 0.535765 | 8_3:-56798322 | Msa1296950:three_prime_UTR |
| GGTGACTTGAGAGAAGAAGA+AGG | 0.539375 | 8_3:+56803112 | None:intergenic |
| AAGGATTCAAGGAGTTTAGT+GGG | 0.542529 | 8_3:-56799836 | Msa1296950:CDS |
| TCACAGAATGCAGTGAAACT+AGG | 0.544745 | 8_3:-56801477 | Msa1296950:CDS |
| AGAAATGTCATGCAAAATCC+GGG | 0.554408 | 8_3:-56798432 | Msa1296950:CDS |
| GGCTTCAGATCAAACAAAGC+TGG | 0.556675 | 8_3:-56802102 | Msa1296950:intron |
| CTCAACTGGTAATTTGAGAT+CGG | 0.556958 | 8_3:+56798225 | None:intergenic |
| CCTTCAAGTTTCTCCACCCG+AGG | 0.559140 | 8_3:-56800590 | Msa1296950:CDS |
| ACTTGAAGGAATCTTGCTCT+AGG | 0.562862 | 8_3:+56800604 | None:intergenic |
| ATATCTGATACCTAAGGAGC+TGG | 0.567502 | 8_3:-56798371 | Msa1296950:CDS |
| AATCCGGGAAGAGCATAGAA+TGG | 0.571165 | 8_3:-56798417 | Msa1296950:CDS |
| ACAGGCTGCATATAATGTTG+GGG | 0.573278 | 8_3:-56799392 | Msa1296950:intron |
| GCCGTTAATATGTGACCCGA+TGG | 0.574806 | 8_3:+56798159 | None:intergenic |
| GAAGAAGAAGGGCTTTAAAG+TGG | 0.575852 | 8_3:+56803124 | None:intergenic |
| AGCATGACTTACCTCCATCA+TGG | 0.578988 | 8_3:+56800309 | None:intergenic |
| TCGAAGTACTGGGAGATGAA+AGG | 0.580370 | 8_3:+56799958 | None:intergenic |
| TCAAGAACTAGAAGTTGCAA+AGG | 0.580877 | 8_3:-56798611 | Msa1296950:CDS |
| ATTGACCAAACATTTGCAGA+TGG | 0.581951 | 8_3:+56798317 | None:intergenic |
| TTTCTTAACACTCTTTCTCA+GGG | 0.582135 | 8_3:+56798450 | None:intergenic |
| TATCGAAAAGTGAAGTTGTG+TGG | 0.588149 | 8_3:+56798391 | None:intergenic |
| GACCCACCTATAACTAATCC+GGG | 0.590808 | 8_3:-56799981 | Msa1296950:CDS |
| ACCATCGGGTCACATATTAA+CGG | 0.592190 | 8_3:-56798160 | Msa1296950:three_prime_UTR |
| AAATGACACGACAATACCCC+AGG | 0.596729 | 8_3:-56801183 | Msa1296950:intron |
| AAGGCGACACGTGGAGTCCA+GGG | 0.597096 | 8_3:-56799911 | Msa1296950:CDS |
| GTGACTTGAGAGAAGAAGAA+GGG | 0.598271 | 8_3:+56803113 | None:intergenic |
| GCTCTAGGTGTTGTTACAGG+AGG | 0.608021 | 8_3:+56800619 | None:intergenic |
| TCGAACATTATTATTCATAG+GGG | 0.608511 | 8_3:+56801444 | None:intergenic |
| GGCTGCATCTGCATCTACCG+TGG | 0.609003 | 8_3:-56800659 | Msa1296950:CDS |
| CAGGCTGCATATAATGTTGG+GGG | 0.609379 | 8_3:-56799391 | Msa1296950:CDS |
| TCCTGATAAGGAAACAGTGA+AGG | 0.611868 | 8_3:-56802147 | Msa1296950:CDS |
| TGATAAGGAAACAGTGAAGG+AGG | 0.613956 | 8_3:-56802144 | Msa1296950:CDS |
| AACAGCTAATAAGCTTTCTG+AGG | 0.613973 | 8_3:-56800045 | Msa1296950:CDS |
| TCAACCCTTGTCCATGATGG+AGG | 0.616259 | 8_3:-56800320 | Msa1296950:intron |
| GGTAGATGCAGATGCAGCCA+CGG | 0.616483 | 8_3:+56800663 | None:intergenic |
| ATTGTGAAATCTGAACCATC+GGG | 0.616886 | 8_3:-56798174 | Msa1296950:three_prime_UTR |
| ACTTACCTCCATCATGGACA+AGG | 0.618958 | 8_3:+56800315 | None:intergenic |
| TTGGCGATCAAGGCGACACG+TGG | 0.623203 | 8_3:-56799920 | Msa1296950:CDS |
| CAATACAAAATACTATACTA+GGG | 0.624356 | 8_3:-56799348 | Msa1296950:CDS |
| AATTAGAAGACGTAGATCCA+GGG | 0.625698 | 8_3:-56799713 | Msa1296950:CDS |
| ATGCAGATGCAGCCACGGCG+GGG | 0.627236 | 8_3:+56800668 | None:intergenic |
| GGCCCGGATTAGTTATAGGT+GGG | 0.627934 | 8_3:+56799979 | None:intergenic |
| GTACTGGGAGATGAAAGGCC+CGG | 0.628975 | 8_3:+56799963 | None:intergenic |
| TCGACAAACGCTGAAGCAAG+AGG | 0.631026 | 8_3:-56801425 | Msa1296950:intron |
| AGGCCCGGATTAGTTATAGG+TGG | 0.635235 | 8_3:+56799978 | None:intergenic |
| ATCAGTCTAGCAGAACATCT+CGG | 0.636239 | 8_3:-56800095 | Msa1296950:CDS |
| AAGGCACTTATCGAAGTACT+GGG | 0.648011 | 8_3:+56799948 | None:intergenic |
| GTCCTTGCGTATCCCAAACG+TGG | 0.649954 | 8_3:+56798573 | None:intergenic |
| GCACCATGGTTGAGGTACCG+TGG | 0.651466 | 8_3:-56799806 | Msa1296950:CDS |
| AGCCACGTTTGGGATACGCA+AGG | 0.661192 | 8_3:-56798575 | Msa1296950:CDS |
| TAGTTTCACTGCATTCTGTG+AGG | 0.666815 | 8_3:+56801479 | None:intergenic |
| TGTTGAATATTGGGATAACG+AGG | 0.674428 | 8_3:+56800405 | None:intergenic |
| AGGAAACCACTCTGATCCAG+CGG | 0.677699 | 8_3:-56798882 | Msa1296950:intron |
| CAAGGCATAATCGTTCAAAG+AGG | 0.687916 | 8_3:-56802595 | Msa1296950:intron |
| TAGTGGGCCATATAGCACCA+TGG | 0.691143 | 8_3:-56799820 | Msa1296950:CDS |
| GGATTGTTCAGATAGCGTTG+AGG | 0.694396 | 8_3:-56802123 | Msa1296950:CDS |
| AGATGCAGATGCAGCCACGG+CGG | 0.694499 | 8_3:+56800666 | None:intergenic |
| TCCAGGGAAGTTGAAACACG+AGG | 0.701221 | 8_3:-56799697 | Msa1296950:CDS |
| AATCCACGGTACCTCAACCA+TGG | 0.702876 | 8_3:+56799803 | None:intergenic |
| CTTACCTCCATCATGGACAA+GGG | 0.706059 | 8_3:+56800316 | None:intergenic |
| TAAGTACCGCTGGATCAGAG+TGG | 0.729686 | 8_3:+56798876 | None:intergenic |
| TCTTCGAAGAAAAGAACACG+CGG | 0.751610 | 8_3:+56798984 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATAATTTACACATA+AGG | + | chr8_3:56801843-56801862 | None:intergenic | 10.0% |
| !!! | AAATTGTTTTTTTTTCCTTT+TGG | - | chr8_3:56798730-56798749 | Msa1296950:intron | 15.0% |
| !!! | AATTGTTTTTTTTTCCTTTT+GGG | - | chr8_3:56798731-56798750 | Msa1296950:intron | 15.0% |
| !!! | TTTACTGTTTTTATGTTATA+TGG | - | chr8_3:56798892-56798911 | Msa1296950:CDS | 15.0% |
| !!! | TTTTTAAATTGAGAATTTGA+AGG | - | chr8_3:56799044-56799063 | Msa1296950:intron | 15.0% |
| !!! | AAATAGTTTTAATTAAAGCA+TGG | - | chr8_3:56799170-56799189 | Msa1296950:intron | 15.0% |
| !!! | AAAAACATTCAGAAAATTTT+GGG | + | chr8_3:56799251-56799270 | None:intergenic | 15.0% |
| !!! | AAAAAACATTCAGAAAATTT+TGG | + | chr8_3:56799252-56799271 | None:intergenic | 15.0% |
| !!! | TTATTTTGCAAAATTTAACA+TGG | - | chr8_3:56799272-56799291 | Msa1296950:intron | 15.0% |
| !! | ACAATTTAGTATATTAATTC+TGG | + | chr8_3:56800066-56800085 | None:intergenic | 15.0% |
| !!! | ATTGTTTTTTGAAATAACAT+TGG | - | chr8_3:56800081-56800100 | Msa1296950:CDS | 15.0% |
| !!! | TGTTATAAGTTTGAAATATT+TGG | - | chr8_3:56800206-56800225 | Msa1296950:intron | 15.0% |
| !! | ATAATAGTTGTTATGTTCTT+AGG | - | chr8_3:56798306-56798325 | Msa1296950:three_prime_UTR | 20.0% |
| !!! | ATAACTTTGATTTTTCATGA+TGG | - | chr8_3:56798419-56798438 | Msa1296950:CDS | 20.0% |
| !!! | TAACTTTGATTTTTCATGAT+GGG | - | chr8_3:56798420-56798439 | Msa1296950:CDS | 20.0% |
| !!! | TTTTTTTTTTCTTCTTCTTC+TGG | - | chr8_3:56798527-56798546 | Msa1296950:CDS | 20.0% |
| !!! | ACTAATTTTCTATATCCATT+TGG | - | chr8_3:56798754-56798773 | Msa1296950:intron | 20.0% |
| !! | ATCACAATTAATTGTATATG+TGG | - | chr8_3:56799141-56799160 | Msa1296950:intron | 20.0% |
| !! | CCAGTAATAATTTGAAAAAA+TGG | + | chr8_3:56799391-56799410 | None:intergenic | 20.0% |
| !!! | CCATTTTTTCAAATTATTAC+TGG | - | chr8_3:56799388-56799407 | Msa1296950:CDS | 20.0% |
| !! | GATAGTATAGTTTATTATCA+CGG | - | chr8_3:56799496-56799515 | Msa1296950:intron | 20.0% |
| !! | ATAGTATAGTTTATTATCAC+GGG | - | chr8_3:56799497-56799516 | Msa1296950:intron | 20.0% |
| !!! | GCCTTAATTTGATTAAATTT+TGG | - | chr8_3:56800898-56800917 | Msa1296950:intron | 20.0% |
| !! | GCCAAAATTTAATCAAATTA+AGG | + | chr8_3:56800902-56800921 | None:intergenic | 20.0% |
| !! | GAGAAATGAAATGTATTAAA+GGG | + | chr8_3:56801472-56801491 | None:intergenic | 20.0% |
| !! | AGAGAAATGAAATGTATTAA+AGG | + | chr8_3:56801473-56801492 | None:intergenic | 20.0% |
| !! | ACAATACAAAATACTATACT+AGG | - | chr8_3:56801719-56801738 | Msa1296950:intron | 20.0% |
| !! | CAATACAAAATACTATACTA+GGG | - | chr8_3:56801720-56801739 | Msa1296950:intron | 20.0% |
| !!! | ACAATAGGAATTTTAACTAA+GGG | + | chr8_3:56802014-56802033 | None:intergenic | 20.0% |
| !!! | CAATTATTGTGTATTCTTTT+CGG | - | chr8_3:56802770-56802789 | Msa1296950:exon | 20.0% |
| !! | AAAATTAAAACAATCTCAAC+TGG | + | chr8_3:56802860-56802879 | None:intergenic | 20.0% |
| ! | AAGTGGAAAATAAACCAAAA+AGG | + | chr8_3:56797996-56798015 | None:intergenic | 25.0% |
| !!! | TTGGTTTATTTTCCACTTTT+AGG | - | chr8_3:56797998-56798017 | Msa1296950:three_prime_UTR | 25.0% |
| ! | CATAGCATAACAATAATCAT+TGG | - | chr8_3:56798096-56798115 | Msa1296950:three_prime_UTR | 25.0% |
| !! | TTCTTGTTTATTCAGAAATG+AGG | + | chr8_3:56798287-56798306 | None:intergenic | 25.0% |
| ! | ATTGTGGAATTTATGTTTGA+GGG | - | chr8_3:56798658-56798677 | Msa1296950:intron | 25.0% |
| !!! | GTTGTTTATTTTCTGGAAAA+TGG | - | chr8_3:56798681-56798700 | Msa1296950:intron | 25.0% |
| ! | TATAGAAAATTAGTCCCAAA+AGG | + | chr8_3:56798748-56798767 | None:intergenic | 25.0% |
| !! | TTCTATATCCATTTGGATTT+TGG | - | chr8_3:56798761-56798780 | Msa1296950:intron | 25.0% |
| !! | TCTATATCCATTTGGATTTT+GGG | - | chr8_3:56798762-56798781 | Msa1296950:intron | 25.0% |
| !! | ATGTTTGAAACTAAAACTGA+AGG | - | chr8_3:56798797-56798816 | Msa1296950:intron | 25.0% |
| !! | TGTTTGAAACTAAAACTGAA+GGG | - | chr8_3:56798798-56798817 | Msa1296950:intron | 25.0% |
| !! | ACAACTTTTAGATGAAATAG+AGG | + | chr8_3:56799006-56799025 | None:intergenic | 25.0% |
| ! | CAACTTAACTGAAAAAATGA+TGG | + | chr8_3:56799206-56799225 | None:intergenic | 25.0% |
| !!! | CATCATTTTTTCAGTTAAGT+TGG | - | chr8_3:56799204-56799223 | Msa1296950:intron | 25.0% |
| ! | TAGTATAGTTTATTATCACG+GGG | - | chr8_3:56799498-56799517 | Msa1296950:intron | 25.0% |
| ! | TCGAACATTATTATTCATAG+GGG | + | chr8_3:56799627-56799646 | None:intergenic | 25.0% |
| ! | GTCGAACATTATTATTCATA+GGG | + | chr8_3:56799628-56799647 | None:intergenic | 25.0% |
| ! | TGTCGAACATTATTATTCAT+AGG | + | chr8_3:56799629-56799648 | None:intergenic | 25.0% |
| ! | TTTGGATTAACAAGAGATAT+GGG | + | chr8_3:56799868-56799887 | None:intergenic | 25.0% |
| ! | ATTTGGATTAACAAGAGATA+TGG | + | chr8_3:56799869-56799888 | None:intergenic | 25.0% |
| !!! | AATCTTATTGATAGTGAACT+TGG | + | chr8_3:56799975-56799994 | None:intergenic | 25.0% |
| !!! | AGTTTTAACCAATTATCAAC+TGG | - | chr8_3:56800028-56800047 | Msa1296950:CDS | 25.0% |
| ! | ATGATCATTACACATTGTTT+AGG | - | chr8_3:56800179-56800198 | Msa1296950:intron | 25.0% |
| ! | AATGTCTTTGATTAATTCTG+TGG | + | chr8_3:56800300-56800319 | None:intergenic | 25.0% |
| ! | AGAGTTAGAAGTTGTATATT+TGG | - | chr8_3:56800328-56800347 | Msa1296950:CDS | 25.0% |
| ! | TGTACAATGTATTCTTTATC+TGG | + | chr8_3:56800596-56800615 | None:intergenic | 25.0% |
| ! | TGATTCTCTTTATAAATCCA+CGG | + | chr8_3:56801282-56801301 | None:intergenic | 25.0% |
| ! | TTATAAAGAGAATCAGAAGT+TGG | - | chr8_3:56801287-56801306 | Msa1296950:intron | 25.0% |
| ! | AAATGTATTAAAGGGTAACA+TGG | + | chr8_3:56801464-56801483 | None:intergenic | 25.0% |
| ! | ATTTCTCTCACATGATTAAT+TGG | - | chr8_3:56801485-56801504 | Msa1296950:CDS | 25.0% |
| !! | GGTTTATTTCTTCTTCTAAT+AGG | - | chr8_3:56801506-56801525 | Msa1296950:intron | 25.0% |
| !!! | CACAATAGGAATTTTAACTA+AGG | + | chr8_3:56802015-56802034 | None:intergenic | 25.0% |
| ! | AGCATCAGGTATTATAAAAA+TGG | + | chr8_3:56802266-56802285 | None:intergenic | 25.0% |
| AATGTCAAAACACCTAAAAG+TGG | + | chr8_3:56798013-56798032 | None:intergenic | 30.0% | |
| TATTGTTATGCTATGTTCCT+AGG | + | chr8_3:56798091-56798110 | None:intergenic | 30.0% | |
| AGCTTCATTCTTTACCTTAA+TGG | - | chr8_3:56798157-56798176 | Msa1296950:three_prime_UTR | 30.0% | |
| GCTTCATTCTTTACCTTAAT+GGG | - | chr8_3:56798158-56798177 | Msa1296950:three_prime_UTR | 30.0% | |
| !! | ATTCTTTACCTTAATGGGTT+TGG | - | chr8_3:56798163-56798182 | Msa1296950:three_prime_UTR | 30.0% |
| !!! | GATTTTTCATGATGGGTTTT+AGG | - | chr8_3:56798427-56798446 | Msa1296950:CDS | 30.0% |
| GATTGTGGAATTTATGTTTG+AGG | - | chr8_3:56798657-56798676 | Msa1296950:intron | 30.0% | |
| TTGTGGAATTTATGTTTGAG+GGG | - | chr8_3:56798659-56798678 | Msa1296950:intron | 30.0% | |
| ! | CTATATCCATTTGGATTTTG+GGG | - | chr8_3:56798763-56798782 | Msa1296950:intron | 30.0% |
| !! | TTAAGTTGGTATTATGAACG+TGG | - | chr8_3:56799218-56799237 | Msa1296950:intron | 30.0% |
| TTGCAAAATTTAACATGGCA+TGG | - | chr8_3:56799277-56799296 | Msa1296950:intron | 30.0% | |
| ! | TGATTAGAGAAGTGATTTTG+TGG | - | chr8_3:56799301-56799320 | Msa1296950:intron | 30.0% |
| TTCTATGTAATCACATGTGT+CGG | + | chr8_3:56799362-56799381 | None:intergenic | 30.0% | |
| AATTATTACTGGTATCTACG+TGG | - | chr8_3:56799399-56799418 | Msa1296950:intron | 30.0% | |
| ATTAATCCCATCTCTTAATG+TGG | - | chr8_3:56799466-56799485 | Msa1296950:intron | 30.0% | |
| ATATCACCACATTAAGAGAT+GGG | + | chr8_3:56799475-56799494 | None:intergenic | 30.0% | |
| AATATCACCACATTAAGAGA+TGG | + | chr8_3:56799476-56799495 | None:intergenic | 30.0% | |
| AGTATAGTTTATTATCACGG+GGG | - | chr8_3:56799499-56799518 | Msa1296950:intron | 30.0% | |
| CCAGATCAAATTCATACTTT+AGG | + | chr8_3:56799552-56799571 | None:intergenic | 30.0% | |
| CCTAAAGTATGAATTTGATC+TGG | - | chr8_3:56799549-56799568 | Msa1296950:intron | 30.0% | |
| GAACCATACTGCAAAAAAAA+TGG | + | chr8_3:56799702-56799721 | None:intergenic | 30.0% | |
| AAGACTAGAAGACCAATTTA+AGG | - | chr8_3:56799807-56799826 | Msa1296950:CDS | 30.0% | |
| TCTTTGATTAATTCTGTGGT+TGG | + | chr8_3:56800296-56800315 | None:intergenic | 30.0% | |
| ! | GTTGTTGTTCAAATGCTTTA+CGG | + | chr8_3:56800376-56800395 | None:intergenic | 30.0% |
| !!! | TACATCTGAACATCCTTTTT+TGG | + | chr8_3:56800510-56800529 | None:intergenic | 30.0% |
| TGAGATTCATACACTTCAAA+AGG | - | chr8_3:56800544-56800563 | Msa1296950:CDS | 30.0% | |
| ACACTTCAAAAGGAATGTAA+TGG | - | chr8_3:56800554-56800573 | Msa1296950:CDS | 30.0% | |
| TGCTGTAGATGTTGAATATT+GGG | + | chr8_3:56800675-56800694 | None:intergenic | 30.0% | |
| TTGCTGTAGATGTTGAATAT+TGG | + | chr8_3:56800676-56800695 | None:intergenic | 30.0% | |
| CATAACAGAACTGATGAATT+AGG | + | chr8_3:56800827-56800846 | None:intergenic | 30.0% | |
| ! | GAGAATGATAGTACTTTTCT+AGG | - | chr8_3:56800876-56800895 | Msa1296950:intron | 30.0% |
| TGGAATATGATCACATATTC+GGG | + | chr8_3:56801001-56801020 | None:intergenic | 30.0% | |
| CTGGAATATGATCACATATT+CGG | + | chr8_3:56801002-56801021 | None:intergenic | 30.0% | |
| ! | TAATAAGCTTTCTGAGGATA+TGG | - | chr8_3:56801029-56801048 | Msa1296950:intron | 30.0% |
| ATCTAACTGTACATCAAAAG+AGG | + | chr8_3:56801196-56801215 | None:intergenic | 30.0% | |
| AAATAAGTGACCTGAAATTC+TGG | + | chr8_3:56801332-56801351 | None:intergenic | 30.0% | |
| !!! | CTTCTTCTAATAGGCTTTTT+TGG | - | chr8_3:56801515-56801534 | Msa1296950:intron | 30.0% |
| !!! | TAATAGGCTTTTTTGGCTTA+TGG | - | chr8_3:56801522-56801541 | Msa1296950:intron | 30.0% |
| !! | ACTCTTTTCACATTGTTTTG+TGG | + | chr8_3:56801552-56801571 | None:intergenic | 30.0% |
| ATTCTTATAGGGTTAGAGTT+GGG | + | chr8_3:56801784-56801803 | None:intergenic | 30.0% | |
| AATTCTTATAGGGTTAGAGT+TGG | + | chr8_3:56801785-56801804 | None:intergenic | 30.0% | |
| ACAAGCGGTTAATTCTTATA+GGG | + | chr8_3:56801795-56801814 | None:intergenic | 30.0% | |
| TACAAGCGGTTAATTCTTAT+AGG | + | chr8_3:56801796-56801815 | None:intergenic | 30.0% | |
| TAAACGCAATATGATACAAG+CGG | + | chr8_3:56801810-56801829 | None:intergenic | 30.0% | |
| TTCAGTACTCAACATTTGTT+TGG | - | chr8_3:56802295-56802314 | Msa1296950:intron | 30.0% | |
| !!! | TCTTAGGTAGAAGTATTTTC+TGG | + | chr8_3:56802520-56802539 | None:intergenic | 30.0% |
| GAGAATGTATCTACAATCTT+AGG | + | chr8_3:56802536-56802555 | None:intergenic | 30.0% | |
| TTTCTTAACACTCTTTCTCA+GGG | + | chr8_3:56802621-56802640 | None:intergenic | 30.0% | |
| ATTTCTTAACACTCTTTCTC+AGG | + | chr8_3:56802622-56802641 | None:intergenic | 30.0% | |
| AAGAAATGTCATGCAAAATC+CGG | - | chr8_3:56802635-56802654 | Msa1296950:intron | 30.0% | |
| ! | TTTTCGATATCTGATACCTA+AGG | - | chr8_3:56802691-56802710 | Msa1296950:intron | 30.0% |
| AATTATTTAACCAGCTCCTT+AGG | + | chr8_3:56802710-56802729 | None:intergenic | 30.0% | |
| GAGCTGGTTAAATAATTACT+TGG | - | chr8_3:56802713-56802732 | Msa1296950:intron | 30.0% | |
| ! | TTGTGTATTCTTTTCGGATT+TGG | - | chr8_3:56802776-56802795 | Msa1296950:five_prime_UTR | 30.0% |
| ! | ATTCTTTTCGGATTTGGATT+TGG | - | chr8_3:56802782-56802801 | Msa1296950:five_prime_UTR | 30.0% |
| TATTGTGAAATCTGAACCAT+CGG | - | chr8_3:56802893-56802912 | Msa1296950:intron | 30.0% | |
| ! | TGTCAATTTTGTACAAAACC+AGG | + | chr8_3:56802984-56803003 | None:intergenic | 30.0% |
| !! | GGTTTTGTACAAAATTGACA+AGG | - | chr8_3:56802984-56803003 | Msa1296950:intron | 30.0% |
| GAAGTTCAAAGAAATCCAAT+TGG | + | chr8_3:56803122-56803141 | None:intergenic | 30.0% | |
| !! | AAAAAGGTTCTAGAGATCCA+AGG | + | chr8_3:56797980-56797999 | None:intergenic | 35.0% |
| !!! | TTGGATCTCTAGAACCTTTT+TGG | - | chr8_3:56797979-56797998 | Msa1296950:three_prime_UTR | 35.0% |
| !!! | TACCTTTTGAGGTTTGTTGA+GGG | + | chr8_3:56798054-56798073 | None:intergenic | 35.0% |
| !!! | TTACCTTTTGAGGTTTGTTG+AGG | + | chr8_3:56798055-56798074 | None:intergenic | 35.0% |
| ! | TTGTAAAGGGTTACCTTTTG+AGG | + | chr8_3:56798065-56798084 | None:intergenic | 35.0% |
| ! | TGTTCCTAGGCTTTTGTAAA+GGG | + | chr8_3:56798078-56798097 | None:intergenic | 35.0% |
| ! | ATGTTCCTAGGCTTTTGTAA+AGG | + | chr8_3:56798079-56798098 | None:intergenic | 35.0% |
| AATAATCATTGGAGCAGTGT+TGG | - | chr8_3:56798107-56798126 | Msa1296950:three_prime_UTR | 35.0% | |
| GTCAAAAAGAACAGTCTCAT+TGG | - | chr8_3:56798129-56798148 | Msa1296950:three_prime_UTR | 35.0% | |
| !! | TTACCTTAATGGGTTTGGTT+TGG | - | chr8_3:56798168-56798187 | Msa1296950:three_prime_UTR | 35.0% |
| AAACCAAACCAAACCCATTA+AGG | + | chr8_3:56798174-56798193 | None:intergenic | 35.0% | |
| !!! | TTCATGATGGGTTTTAGGAA+TGG | - | chr8_3:56798432-56798451 | Msa1296950:CDS | 35.0% |
| !!! | TCATGATGGGTTTTAGGAAT+GGG | - | chr8_3:56798433-56798452 | Msa1296950:CDS | 35.0% |
| ! | TTCTTCTTCTTCTGGAAACT+CGG | - | chr8_3:56798535-56798554 | Msa1296950:CDS | 35.0% |
| GTCTTTATGTCTCTTGATTG+TGG | - | chr8_3:56798642-56798661 | Msa1296950:CDS | 35.0% | |
| !! | TTGAGGGGTTGTTTATTTTC+TGG | - | chr8_3:56798674-56798693 | Msa1296950:intron | 35.0% |
| TCGTAGAAAACATGCATATG+TGG | - | chr8_3:56799441-56799460 | Msa1296950:intron | 35.0% | |
| ! | TATGAATTTGATCTGGTTCC+AGG | - | chr8_3:56799556-56799575 | Msa1296950:intron | 35.0% |
| !!! | CAGCCATTTTTTTTGCAGTA+TGG | - | chr8_3:56799696-56799715 | Msa1296950:CDS | 35.0% |
| !!! | GTGCTTTTTCTAATGTGCAT+CGG | + | chr8_3:56799834-56799853 | None:intergenic | 35.0% |
| !! | TGCACATTAGAAAAAGCACT+TGG | - | chr8_3:56799835-56799854 | Msa1296950:CDS | 35.0% |
| ATTGAAGAAATTCCAACCTG+GGG | + | chr8_3:56799904-56799923 | None:intergenic | 35.0% | |
| CATTGAAGAAATTCCAACCT+GGG | + | chr8_3:56799905-56799924 | None:intergenic | 35.0% | |
| TCATTGAAGAAATTCCAACC+TGG | + | chr8_3:56799906-56799925 | None:intergenic | 35.0% | |
| GTGAACTTGGAAAGAAAAAG+TGG | + | chr8_3:56799962-56799981 | None:intergenic | 35.0% | |
| ! | TCCATGCATAGATGTAGTTT+TGG | - | chr8_3:56800107-56800126 | Msa1296950:CDS | 35.0% |
| ACCAAAACTACATCTATGCA+TGG | + | chr8_3:56800111-56800130 | None:intergenic | 35.0% | |
| CACGATAACTTTATGTTTGC+CGG | + | chr8_3:56800150-56800169 | None:intergenic | 35.0% | |
| TTCAAATGCTTTACGGTACA+AGG | + | chr8_3:56800369-56800388 | None:intergenic | 35.0% | |
| ! | AGACTTTTCACTTTCTTCCA+CGG | + | chr8_3:56800429-56800448 | None:intergenic | 35.0% |
| !!! | TCCTTTTTTGGTTAAGACCT+CGG | + | chr8_3:56800498-56800517 | None:intergenic | 35.0% |
| ! | TATTCTTTATCTGGAGTCTC+AGG | + | chr8_3:56800587-56800606 | None:intergenic | 35.0% |
| TGTTGAATATTGGGATAACG+AGG | + | chr8_3:56800666-56800685 | None:intergenic | 35.0% | |
| !!! | ACCTGTTTTAATATGTCGTC+TGG | - | chr8_3:56800799-56800818 | Msa1296950:intron | 35.0% |
| TTCTGCTAGACTGATTACTT+TGG | + | chr8_3:56800968-56800987 | None:intergenic | 35.0% | |
| ! | GAAAGCTTATTAGCTGTTTC+TGG | + | chr8_3:56801021-56801040 | None:intergenic | 35.0% |
| AACAGCTAATAAGCTTTCTG+AGG | - | chr8_3:56801023-56801042 | Msa1296950:intron | 35.0% | |
| ! | TCGATAAGTGCCTTTTCTAT+TGG | - | chr8_3:56801129-56801148 | Msa1296950:intron | 35.0% |
| GATAATCCTTTCAACGTTGA+AGG | - | chr8_3:56801213-56801232 | Msa1296950:CDS | 35.0% | |
| TTGAATCCTTCAACGTTGAA+AGG | + | chr8_3:56801222-56801241 | None:intergenic | 35.0% | |
| TTTCAACGTTGAAGGATTCA+AGG | - | chr8_3:56801221-56801240 | Msa1296950:CDS | 35.0% | |
| AAGGATTCAAGGAGTTTAGT+GGG | - | chr8_3:56801232-56801251 | Msa1296950:CDS | 35.0% | |
| AATTAGAAGACGTAGATCCA+GGG | - | chr8_3:56801355-56801374 | Msa1296950:intron | 35.0% | |
| AAGAGTCTTTCTTCTCTTGA+AGG | - | chr8_3:56801566-56801585 | Msa1296950:intron | 35.0% | |
| GAAAGTCAGCTAAAGTAGAT+AGG | + | chr8_3:56801639-56801658 | None:intergenic | 35.0% | |
| TTACAGGCTGCATATAATGT+TGG | - | chr8_3:56801674-56801693 | Msa1296950:intron | 35.0% | |
| TACAGGCTGCATATAATGTT+GGG | - | chr8_3:56801675-56801694 | Msa1296950:intron | 35.0% | |
| TCAAATAAGCTAGTCCAAAC+AGG | - | chr8_3:56801988-56802007 | Msa1296950:intron | 35.0% | |
| !!! | ATTTTAACTAAGGGCCTGTT+TGG | + | chr8_3:56802005-56802024 | None:intergenic | 35.0% |
| GATCTCATAAGTCACACAAT+AGG | + | chr8_3:56802029-56802048 | None:intergenic | 35.0% | |
| TCGAAGACAAAATTCAAAGC+TGG | - | chr8_3:56802100-56802119 | Msa1296950:intron | 35.0% | |
| ACAAAATTCAAAGCTGGAGA+TGG | - | chr8_3:56802106-56802125 | Msa1296950:CDS | 35.0% | |
| CTGAATGTAAAGATAGCATC+AGG | + | chr8_3:56802280-56802299 | None:intergenic | 35.0% | |
| TTGTTTGGACAAATACCTTC+TGG | - | chr8_3:56802310-56802329 | Msa1296950:intron | 35.0% | |
| GTTGTACTGAACTTTATGAC+AGG | - | chr8_3:56802406-56802425 | Msa1296950:intron | 35.0% | |
| AGTTCTTGAAACACTCTCTT+CGG | + | chr8_3:56802446-56802465 | None:intergenic | 35.0% | |
| TCAAGAACTAGAAGTTGCAA+AGG | - | chr8_3:56802457-56802476 | Msa1296950:intron | 35.0% | |
| AGAAATGTCATGCAAAATCC+GGG | - | chr8_3:56802636-56802655 | Msa1296950:intron | 35.0% | |
| TATCGAAAAGTGAAGTTGTG+TGG | + | chr8_3:56802680-56802699 | None:intergenic | 35.0% | |
| ATTGACCAAACATTTGCAGA+TGG | + | chr8_3:56802754-56802773 | None:intergenic | 35.0% | |
| ! | CTCAACTGGTAATTTGAGAT+CGG | + | chr8_3:56802846-56802865 | None:intergenic | 35.0% |
| ATTGTGAAATCTGAACCATC+GGG | - | chr8_3:56802894-56802913 | Msa1296950:intron | 35.0% | |
| GTAGTCAATCAAATGCCAAT+TGG | - | chr8_3:56803104-56803123 | Msa1296950:five_prime_UTR | 35.0% | |
| !! | GAAGAAGAAGGGCTTTAAAG+TGG | + | chr8_3:56797947-56797966 | None:intergenic | 40.0% |
| GTGACTTGAGAGAAGAAGAA+GGG | + | chr8_3:56797958-56797977 | None:intergenic | 40.0% | |
| TTGAGGGTAGTGATAGAGTA+AGG | + | chr8_3:56798038-56798057 | None:intergenic | 40.0% | |
| TACCCTCAACAAACCTCAAA+AGG | - | chr8_3:56798049-56798068 | Msa1296950:three_prime_UTR | 40.0% | |
| GTAACCCTTTACAAAAGCCT+AGG | - | chr8_3:56798071-56798090 | Msa1296950:three_prime_UTR | 40.0% | |
| ! | TTGTTGCACAGTGTCATTAG+TGG | - | chr8_3:56798202-56798221 | Msa1296950:three_prime_UTR | 40.0% |
| !!! | GTTTTAGGAATGGGACTTGA+AGG | - | chr8_3:56798442-56798461 | Msa1296950:CDS | 40.0% |
| GACTTGAAGGTTTGATTCCA+AGG | - | chr8_3:56798455-56798474 | Msa1296950:CDS | 40.0% | |
| CTCTTTGAACGATTATGCCT+TGG | + | chr8_3:56798475-56798494 | None:intergenic | 40.0% | |
| CAAGGCATAATCGTTCAAAG+AGG | - | chr8_3:56798473-56798492 | Msa1296950:CDS | 40.0% | |
| ! | TCTTCTGGAAACTCGGTATT+CGG | - | chr8_3:56798542-56798561 | Msa1296950:CDS | 40.0% |
| TTTAATTGGGCCTCTGCTAA+TGG | + | chr8_3:56798589-56798608 | None:intergenic | 40.0% | |
| AGCTCTATATGGACAGAAGT+TGG | - | chr8_3:56798619-56798638 | Msa1296950:CDS | 40.0% | |
| GCTCTATATGGACAGAAGTT+GGG | - | chr8_3:56798620-56798639 | Msa1296950:CDS | 40.0% | |
| CTTTCTCCCCAAAATCCAAA+TGG | + | chr8_3:56798772-56798791 | None:intergenic | 40.0% | |
| !! | CATTTGGATTTTGGGGAGAA+AGG | - | chr8_3:56798770-56798789 | Msa1296950:intron | 40.0% |
| ATATGGCAGCTTTCCTGATA+AGG | - | chr8_3:56798909-56798928 | Msa1296950:CDS | 40.0% | |
| TCCTGATAAGGAAACAGTGA+AGG | - | chr8_3:56798921-56798940 | Msa1296950:CDS | 40.0% | |
| TCCTTCACTGTTTCCTTATC+AGG | + | chr8_3:56798925-56798944 | None:intergenic | 40.0% | |
| TGATAAGGAAACAGTGAAGG+AGG | - | chr8_3:56798924-56798943 | Msa1296950:CDS | 40.0% | |
| GTTGGTATTATGAACGTGGA+AGG | - | chr8_3:56799222-56799241 | Msa1296950:intron | 40.0% | |
| TATGTAATCACATGTGTCGG+TGG | + | chr8_3:56799359-56799378 | None:intergenic | 40.0% | |
| TAGTTTCACTGCATTCTGTG+AGG | + | chr8_3:56799592-56799611 | None:intergenic | 40.0% | |
| TCACAGAATGCAGTGAAACT+AGG | - | chr8_3:56799591-56799610 | Msa1296950:intron | 40.0% | |
| ATGTGCATCGGACCTTAAAT+TGG | + | chr8_3:56799822-56799841 | None:intergenic | 40.0% | |
| !! | GTCACACACCAGTTGATAAT+TGG | + | chr8_3:56800039-56800058 | None:intergenic | 40.0% |
| TGATTAATTCTGTGGTTGGC+TGG | + | chr8_3:56800292-56800311 | None:intergenic | 40.0% | |
| ACTTGAAGGAATCTTGCTCT+AGG | + | chr8_3:56800467-56800486 | None:intergenic | 40.0% | |
| !!! | CCTTTTTTGGTTAAGACCTC+GGG | + | chr8_3:56800497-56800516 | None:intergenic | 40.0% |
| ! | GAGTCTGAATGCTTTTCTTC+TGG | + | chr8_3:56800623-56800642 | None:intergenic | 40.0% |
| GCCAGACGACATATTAAAAC+AGG | + | chr8_3:56800803-56800822 | None:intergenic | 40.0% | |
| ATCAGTCTAGCAGAACATCT+CGG | - | chr8_3:56800973-56800992 | Msa1296950:intron | 40.0% | |
| AGACCCACCTATAACTAATC+CGG | - | chr8_3:56801086-56801105 | Msa1296950:intron | 40.0% | |
| ! | AAGGCACTTATCGAAGTACT+GGG | + | chr8_3:56801123-56801142 | None:intergenic | 40.0% |
| !! | AAAGGCACTTATCGAAGTAC+TGG | + | chr8_3:56801124-56801143 | None:intergenic | 40.0% |
| !! | GAGGAGTTATTTCTTAACCC+TGG | + | chr8_3:56801177-56801196 | None:intergenic | 40.0% |
| GAAGGATTCAAGGAGTTTAG+TGG | - | chr8_3:56801231-56801250 | Msa1296950:CDS | 40.0% | |
| AACAGTTGCTCCAGAATTTC+AGG | - | chr8_3:56801319-56801338 | Msa1296950:intron | 40.0% | |
| CAATTAGAAGACGTAGATCC+AGG | - | chr8_3:56801354-56801373 | Msa1296950:intron | 40.0% | |
| CTCAGTGTATTGCTCTTTAC+AGG | - | chr8_3:56801658-56801677 | Msa1296950:intron | 40.0% | |
| ACAGGCTGCATATAATGTTG+GGG | - | chr8_3:56801676-56801695 | Msa1296950:intron | 40.0% | |
| GAGCTATCTTGAAGAGCTTA+TGG | - | chr8_3:56801897-56801916 | Msa1296950:intron | 40.0% | |
| ! | AAGCACTTGTGATGCTGTTT+CGG | + | chr8_3:56801952-56801971 | None:intergenic | 40.0% |
| TAACTTTCTTCCTCTTGCAG+TGG | - | chr8_3:56802059-56802078 | Msa1296950:intron | 40.0% | |
| TCTTCGAAGAAAAGAACACG+CGG | + | chr8_3:56802087-56802106 | None:intergenic | 40.0% | |
| CTTCACTTTGCACTTTGTTC+AGG | - | chr8_3:56802166-56802185 | Msa1296950:intron | 40.0% | |
| AGTACATTAGAGCCACGTTT+GGG | - | chr8_3:56802483-56802502 | Msa1296950:intron | 40.0% | |
| GATACATTCTCCAGAGATTC+AGG | - | chr8_3:56802545-56802564 | Msa1296950:intron | 40.0% | |
| ATGAGACAAACCTGAATCTC+TGG | + | chr8_3:56802558-56802577 | None:intergenic | 40.0% | |
| AATCCATTCTATGCTCTTCC+CGG | + | chr8_3:56802657-56802676 | None:intergenic | 40.0% | |
| ATATCTGATACCTAAGGAGC+TGG | - | chr8_3:56802697-56802716 | Msa1296950:intron | 40.0% | |
| TGAGACCATCTGCAAATGTT+TGG | - | chr8_3:56802746-56802765 | Msa1296950:intron | 40.0% | |
| ACCATCGGGTCACATATTAA+CGG | - | chr8_3:56802908-56802927 | Msa1296950:intron | 40.0% | |
| ! | TTACACGCAGTTTTCGATCT+CGG | + | chr8_3:56802934-56802953 | None:intergenic | 40.0% |
| TTGTCTACTGTAACAGATCC+TGG | - | chr8_3:56802963-56802982 | Msa1296950:intron | 40.0% | |
| GGTGACTTGAGAGAAGAAGA+AGG | + | chr8_3:56797959-56797978 | None:intergenic | 45.0% | |
| CTTCTTCTCTCAAGTCACCT+TGG | - | chr8_3:56797960-56797979 | Msa1296950:three_prime_UTR | 45.0% | |
| ! | CTGCTAATGGACAGTGGAAT+CGG | + | chr8_3:56798576-56798595 | None:intergenic | 45.0% |
| ATTCCACTGTCCATTAGCAG+AGG | - | chr8_3:56798576-56798595 | Msa1296950:CDS | 45.0% | |
| GCTTCGCTCGGACTTTAATT+GGG | + | chr8_3:56798602-56798621 | None:intergenic | 45.0% | |
| AGCTTCGCTCGGACTTTAAT+TGG | + | chr8_3:56798603-56798622 | None:intergenic | 45.0% | |
| TGTCCATATAGAGCTTCGCT+CGG | + | chr8_3:56798614-56798633 | None:intergenic | 45.0% | |
| GGATTGTTCAGATAGCGTTG+AGG | - | chr8_3:56798945-56798964 | Msa1296950:CDS | 45.0% | |
| GGCTTCAGATCAAACAAAGC+TGG | - | chr8_3:56798966-56798985 | Msa1296950:CDS | 45.0% | |
| ! | GTGATTTTGTGGCATGTCGA+AGG | - | chr8_3:56799312-56799331 | Msa1296950:intron | 45.0% |
| ! | AATCACATGTGTCGGTGGTT+GGG | + | chr8_3:56799354-56799373 | None:intergenic | 45.0% |
| ! | TAATCACATGTGTCGGTGGT+TGG | + | chr8_3:56799355-56799374 | None:intergenic | 45.0% |
| ! | TTGATCTGGTTCCAGGATAC+AGG | - | chr8_3:56799563-56799582 | Msa1296950:intron | 45.0% |
| !! | TGGGGTATTGTCGTGTCATT+TGG | + | chr8_3:56799886-56799905 | None:intergenic | 45.0% |
| AAATGACACGACAATACCCC+AGG | - | chr8_3:56799885-56799904 | Msa1296950:CDS | 45.0% | |
| GGTTTCTGCATTGTATGTGC+CGG | - | chr8_3:56800128-56800147 | Msa1296950:CDS | 45.0% | |
| !! | CTTGCTCTAGGTGTTGTTAC+AGG | + | chr8_3:56800455-56800474 | None:intergenic | 45.0% |
| !!! | TTTTTGGTTAAGACCTCGGG+TGG | + | chr8_3:56800494-56800513 | None:intergenic | 45.0% |
| CCCGAGGTCTTAACCAAAAA+AGG | - | chr8_3:56800494-56800513 | Msa1296950:CDS | 45.0% | |
| GGACAAGGGTTGAGAATAAC+AGG | + | chr8_3:56800741-56800760 | None:intergenic | 45.0% | |
| TTCTCAACCCTTGTCCATGA+TGG | - | chr8_3:56800745-56800764 | Msa1296950:CDS | 45.0% | |
| CTTACCTCCATCATGGACAA+GGG | + | chr8_3:56800755-56800774 | None:intergenic | 45.0% | |
| ACTTACCTCCATCATGGACA+AGG | + | chr8_3:56800756-56800775 | None:intergenic | 45.0% | |
| AGCATGACTTACCTCCATCA+TGG | + | chr8_3:56800762-56800781 | None:intergenic | 45.0% | |
| TGGAGGTAAGTCATGCTTCA+TGG | - | chr8_3:56800765-56800784 | Msa1296950:CDS | 45.0% | |
| GACCCACCTATAACTAATCC+GGG | - | chr8_3:56801087-56801106 | Msa1296950:intron | 45.0% | |
| !! | GAAAGGCCCGGATTAGTTAT+AGG | + | chr8_3:56801096-56801115 | None:intergenic | 45.0% |
| !! | TCGAAGTACTGGGAGATGAA+AGG | + | chr8_3:56801113-56801132 | None:intergenic | 45.0% |
| ! | GCCTTTTCTATTGGCGATCA+AGG | - | chr8_3:56801138-56801157 | Msa1296950:intron | 45.0% |
| GCCTTGATCGCCAATAGAAA+AGG | + | chr8_3:56801142-56801161 | None:intergenic | 45.0% | |
| !! | ACCTCAACCATGGTGCTATA+TGG | + | chr8_3:56801258-56801277 | None:intergenic | 45.0% |
| !! | ACGAGGAGAAGTTAGCTTTC+TGG | - | chr8_3:56801388-56801407 | Msa1296950:intron | 45.0% |
| CAGGCTGCATATAATGTTGG+GGG | - | chr8_3:56801677-56801696 | Msa1296950:intron | 45.0% | |
| ATTGTATGTTCCACCTGTCC+AGG | + | chr8_3:56801761-56801780 | None:intergenic | 45.0% | |
| GCAAAGTGAAGAAGAGACTC+AGG | + | chr8_3:56802157-56802176 | None:intergenic | 45.0% | |
| ! | AGAACTGAGATAAGTACCGC+TGG | + | chr8_3:56802205-56802224 | None:intergenic | 45.0% |
| ACAAATACCTTCTGGCACTG+TGG | - | chr8_3:56802318-56802337 | Msa1296950:intron | 45.0% | |
| CAAATACCTTCTGGCACTGT+GGG | - | chr8_3:56802319-56802338 | Msa1296950:intron | 45.0% | |
| GAGTACATTAGAGCCACGTT+TGG | - | chr8_3:56802482-56802501 | Msa1296950:intron | 45.0% | |
| ! | GATTCAGGTTTGTCTCATGC+TGG | - | chr8_3:56802560-56802579 | Msa1296950:intron | 45.0% |
| ACACTCTTTCTCAGGGATTC+AGG | + | chr8_3:56802614-56802633 | None:intergenic | 45.0% | |
| ! | AATCCGGGAAGAGCATAGAA+TGG | - | chr8_3:56802651-56802670 | Msa1296950:intron | 45.0% |
| AGTCCGAGCGAAGCTCTATA+TGG | - | chr8_3:56798608-56798627 | Msa1296950:CDS | 50.0% | |
| ! | CATGTCGAAGGTGTAGTGTC+CGG | - | chr8_3:56799324-56799343 | Msa1296950:CDS | 50.0% |
| ! | ATCACATGTGTCGGTGGTTG+GGG | + | chr8_3:56799353-56799372 | None:intergenic | 50.0% |
| CTGTGAGGTAACCTGTATCC+TGG | + | chr8_3:56799577-56799596 | None:intergenic | 50.0% | |
| TCGACAAACGCTGAAGCAAG+AGG | - | chr8_3:56799643-56799662 | Msa1296950:intron | 50.0% | |
| !! | GCTCTAGGTGTTGTTACAGG+AGG | + | chr8_3:56800452-56800471 | None:intergenic | 50.0% |
| TCAACCCTTGTCCATGATGG+AGG | - | chr8_3:56800748-56800767 | Msa1296950:CDS | 50.0% | |
| !! | GGCCCGGATTAGTTATAGGT+GGG | + | chr8_3:56801092-56801111 | None:intergenic | 50.0% |
| !! | AGGCCCGGATTAGTTATAGG+TGG | + | chr8_3:56801093-56801112 | None:intergenic | 50.0% |
| ! | TAGTGGGCCATATAGCACCA+TGG | - | chr8_3:56801248-56801267 | Msa1296950:CDS | 50.0% |
| GCCATATAGCACCATGGTTG+AGG | - | chr8_3:56801254-56801273 | Msa1296950:CDS | 50.0% | |
| AATCCACGGTACCTCAACCA+TGG | + | chr8_3:56801268-56801287 | None:intergenic | 50.0% | |
| TCCAGGGAAGTTGAAACACG+AGG | - | chr8_3:56801371-56801390 | Msa1296950:intron | 50.0% | |
| TCCTCGTGTTTCAACTTCCC+TGG | + | chr8_3:56801375-56801394 | None:intergenic | 50.0% | |
| AGGAAACCACTCTGATCCAG+CGG | - | chr8_3:56802186-56802205 | Msa1296950:intron | 50.0% | |
| ! | TAAGTACCGCTGGATCAGAG+TGG | + | chr8_3:56802195-56802214 | None:intergenic | 50.0% |
| GGGATTCAGGTAGAGACTGT+TGG | + | chr8_3:56802601-56802620 | None:intergenic | 50.0% | |
| GCCGTTAATATGTGACCCGA+TGG | + | chr8_3:56802912-56802931 | None:intergenic | 50.0% | |
| GACACGACAATACCCCAGGT+TGG | - | chr8_3:56799889-56799908 | Msa1296950:CDS | 55.0% | |
| GGTAGATGCAGATGCAGCCA+CGG | + | chr8_3:56800408-56800427 | None:intergenic | 55.0% | |
| CCTCGGGTGGAGAAACTTGA+AGG | + | chr8_3:56800481-56800500 | None:intergenic | 55.0% | |
| ! | CCTTCAAGTTTCTCCACCCG+AGG | - | chr8_3:56800478-56800497 | Msa1296950:CDS | 55.0% |
| GTACTGGGAGATGAAAGGCC+CGG | + | chr8_3:56801108-56801127 | None:intergenic | 55.0% | |
| CCTGTCCAGGACGAGACATT+CGG | + | chr8_3:56801748-56801767 | None:intergenic | 55.0% | |
| AATGTCTCGTCCTGGACAGG+TGG | - | chr8_3:56801748-56801767 | Msa1296950:intron | 55.0% | |
| TGATCACCCACAGTGCCAGA+AGG | + | chr8_3:56802328-56802347 | None:intergenic | 55.0% | |
| ! | AGCCACGTTTGGGATACGCA+AGG | - | chr8_3:56802493-56802512 | Msa1296950:intron | 55.0% |
| GTCCTTGCGTATCCCAAACG+TGG | + | chr8_3:56802498-56802517 | None:intergenic | 55.0% | |
| ! | GGGCCTCTGCTAATGGACAG+TGG | + | chr8_3:56798582-56798601 | None:intergenic | 60.0% |
| ACAACAACTATCCCCCGCCG+TGG | - | chr8_3:56800388-56800407 | Msa1296950:CDS | 60.0% | |
| AGATGCAGATGCAGCCACGG+CGG | + | chr8_3:56800405-56800424 | None:intergenic | 60.0% | |
| GGCTGCATCTGCATCTACCG+TGG | - | chr8_3:56800409-56800428 | Msa1296950:CDS | 60.0% | |
| TTGGCGATCAAGGCGACACG+TGG | - | chr8_3:56801148-56801167 | Msa1296950:intron | 60.0% | |
| AAGGCGACACGTGGAGTCCA+GGG | - | chr8_3:56801157-56801176 | Msa1296950:intron | 60.0% | |
| !! | GCACCATGGTTGAGGTACCG+TGG | - | chr8_3:56801262-56801281 | Msa1296950:CDS | 60.0% |
| CCGAATGTCTCGTCCTGGAC+AGG | - | chr8_3:56801745-56801764 | Msa1296950:intron | 60.0% | |
| ACACGCGGAACCACTGCAAG+AGG | + | chr8_3:56802072-56802091 | None:intergenic | 60.0% | |
| ! | GTGTCGGTGGTTGGGGACAC+CGG | + | chr8_3:56799346-56799365 | None:intergenic | 65.0% |
| ATGCAGATGCAGCCACGGCG+GGG | + | chr8_3:56800403-56800422 | None:intergenic | 65.0% | |
| GATGCAGATGCAGCCACGGC+GGG | + | chr8_3:56800404-56800423 | None:intergenic | 65.0% | |
| CAAGGCGACACGTGGAGTCC+AGG | - | chr8_3:56801156-56801175 | Msa1296950:intron | 65.0% | |
| !! | GGGTGCCGAATGTCTCGTCC+TGG | - | chr8_3:56801740-56801759 | Msa1296950:intron | 65.0% |
| TGCAGATGCAGCCACGGCGG+GGG | + | chr8_3:56800402-56800421 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 56797924 | 56803166 | 56797924 | ID=Msa1296950;Name=Msa1296950 |
| chr8_3 | mRNA | 56797924 | 56803166 | 56797924 | ID=Msa1296950-mRNA-1;Parent=Msa1296950;Name=Msa1296950-mRNA-1;_AED=0.10;_eAED=0.10;_QI=252|1|1|1|0.81|0.83|12|439|627 |
| chr8_3 | exon | 56797924 | 56798662 | 56797924 | ID=Msa1296950-mRNA-1:exon:16292;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56798883 | 56799011 | 56798883 | ID=Msa1296950-mRNA-1:exon:16291;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56799324 | 56799410 | 56799324 | ID=Msa1296950-mRNA-1:exon:16290;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56799503 | 56799562 | 56799503 | ID=Msa1296950-mRNA-1:exon:16289;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56799650 | 56800150 | 56799650 | ID=Msa1296950-mRNA-1:exon:16288;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56800321 | 56800797 | 56800321 | ID=Msa1296950-mRNA-1:exon:16287;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56801184 | 56801300 | 56801184 | ID=Msa1296950-mRNA-1:exon:16286;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56801426 | 56801512 | 56801426 | ID=Msa1296950-mRNA-1:exon:16285;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56802103 | 56802172 | 56802103 | ID=Msa1296950-mRNA-1:exon:16284;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56802596 | 56802641 | 56802596 | ID=Msa1296950-mRNA-1:exon:16283;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56802763 | 56802877 | 56802763 | ID=Msa1296950-mRNA-1:exon:16282;Parent=Msa1296950-mRNA-1 |
| chr8_3 | exon | 56803020 | 56803166 | 56803020 | ID=Msa1296950-mRNA-1:exon:16281;Parent=Msa1296950-mRNA-1 |
| chr8_3 | five_prime_UTR | 56803020 | 56803166 | 56803020 | ID=Msa1296950-mRNA-1:five_prime_utr;Parent=Msa1296950-mRNA-1 |
| chr8_3 | five_prime_UTR | 56802773 | 56802877 | 56802773 | ID=Msa1296950-mRNA-1:five_prime_utr;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56802763 | 56802772 | 56802763 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56802596 | 56802641 | 56802596 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56802103 | 56802172 | 56802103 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56801426 | 56801512 | 56801426 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56801184 | 56801300 | 56801184 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56800321 | 56800797 | 56800321 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56799650 | 56800150 | 56799650 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56799503 | 56799562 | 56799503 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56799324 | 56799410 | 56799324 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56798883 | 56799011 | 56798883 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | CDS | 56798363 | 56798662 | 56798363 | ID=Msa1296950-mRNA-1:cds;Parent=Msa1296950-mRNA-1 |
| chr8_3 | three_prime_UTR | 56797924 | 56798362 | 56797924 | ID=Msa1296950-mRNA-1:three_prime_utr;Parent=Msa1296950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
