Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735010 | XP_003615966.1 | 93.333 | 360 | 24 | 0 | 1 | 360 | 1 | 360 | 0.0 | 697 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735010 | sp|B0ZB57|OMT3_HUMLU | 62.500 | 360 | 129 | 3 | 6 | 360 | 19 | 377 | 2.30e-167 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735010 | G7KFJ3 | 93.333 | 360 | 24 | 0 | 1 | 360 | 1 | 360 | 0.0 | 697 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0735010 | 0.835663 | 1.471523e-56 | -8.615850e-47 |
| Msa0013270 | Msa0735010 | 0.810972 | 8.835367e-51 | -8.615850e-47 |
| Msa0025570 | Msa0735010 | 0.804581 | 2.016878e-49 | -8.615850e-47 |
| Msa0033220 | Msa0735010 | 0.807632 | 4.597214e-50 | -8.615850e-47 |
| Msa0038530 | Msa0735010 | 0.805608 | 1.229563e-49 | -8.615850e-47 |
| Msa0045810 | Msa0735010 | 0.829588 | 4.733427e-55 | -8.615850e-47 |
| Msa0046200 | Msa0735010 | 0.818784 | 1.636072e-52 | -8.615850e-47 |
| Msa0060410 | Msa0735010 | 0.804372 | 2.229679e-49 | -8.615850e-47 |
| Msa0073110 | Msa0735010 | 0.816035 | 6.804177e-52 | -8.615850e-47 |
| Msa0077570 | Msa0735010 | -0.810647 | 1.038782e-50 | -8.615850e-47 |
| Msa0079880 | Msa0735010 | 0.814175 | 1.761642e-51 | -8.615850e-47 |
| Msa0080030 | Msa0735010 | 0.813971 | 1.953389e-51 | -8.615850e-47 |
| Msa0092350 | Msa0735010 | 0.821391 | 4.139995e-53 | -8.615850e-47 |
| Msa0101530 | Msa0735010 | 0.805564 | 1.256084e-49 | -8.615850e-47 |
| Msa0106540 | Msa0735010 | 0.815025 | 1.142252e-51 | -8.615850e-47 |
| Msa0605480 | Msa0735010 | 0.816500 | 5.356112e-52 | -8.615850e-47 |
| Msa0629720 | Msa0735010 | 0.807334 | 5.318660e-50 | -8.615850e-47 |
| Msa0643230 | Msa0735010 | 0.802807 | 4.708848e-49 | -8.615850e-47 |
| Msa0645370 | Msa0735010 | 0.815625 | 8.398451e-52 | -8.615850e-47 |
| Msa0645390 | Msa0735010 | 0.807975 | 3.886611e-50 | -8.615850e-47 |
| Msa0646010 | Msa0735010 | 0.834195 | 3.449561e-56 | -8.615850e-47 |
| Msa0646430 | Msa0735010 | 0.847651 | 1.010746e-59 | -8.615850e-47 |
| Msa0646440 | Msa0735010 | 0.820720 | 5.908974e-53 | -8.615850e-47 |
| Msa0657710 | Msa0735010 | 0.805533 | 1.275084e-49 | -8.615850e-47 |
| Msa0658120 | Msa0735010 | 0.809618 | 1.730750e-50 | -8.615850e-47 |
| Msa0660090 | Msa0735010 | 0.825001 | 5.946819e-54 | -8.615850e-47 |
| Msa0685390 | Msa0735010 | -0.816950 | 4.245558e-52 | -8.615850e-47 |
| Msa0686040 | Msa0735010 | 0.820077 | 8.300013e-53 | -8.615850e-47 |
| Msa0686830 | Msa0735010 | 0.803529 | 3.338597e-49 | -8.615850e-47 |
| Msa0702800 | Msa0735010 | 0.801594 | 8.366480e-49 | -8.615850e-47 |
| Msa0708020 | Msa0735010 | 0.836501 | 9.017133e-57 | -8.615850e-47 |
| Msa0716980 | Msa0735010 | 0.805530 | 1.277036e-49 | -8.615850e-47 |
| Msa0735010 | Msa0745140 | 0.814217 | 1.724126e-51 | -8.615850e-47 |
| Msa0735010 | Msa0769910 | -0.809258 | 2.067650e-50 | -8.615850e-47 |
| Msa0735010 | Msa0776640 | 0.814654 | 1.380392e-51 | -8.615850e-47 |
| Msa0735010 | Msa0776940 | 0.922125 | 1.474932e-88 | -8.615850e-47 |
| Msa0735010 | Msa0792410 | 0.806980 | 6.320011e-50 | -8.615850e-47 |
| Msa0735010 | Msa0812720 | 0.806983 | 6.311940e-50 | -8.615850e-47 |
| Msa0735010 | Msa0817690 | 0.807229 | 5.596510e-50 | -8.615850e-47 |
| Msa0735010 | Msa0819310 | 0.855425 | 6.363781e-62 | -8.615850e-47 |
| Msa0735010 | Msa0825920 | 0.820481 | 6.704179e-53 | -8.615850e-47 |
| Msa0735010 | Msa0828350 | 0.810358 | 1.199334e-50 | -8.615850e-47 |
| Msa0735010 | Msa0828960 | 0.807063 | 6.068323e-50 | -8.615850e-47 |
| Msa0735010 | Msa0854760 | 0.811482 | 6.846993e-51 | -8.615850e-47 |
| Msa0735010 | Msa0857260 | 0.801493 | 8.774044e-49 | -8.615850e-47 |
| Msa0735010 | Msa0865420 | 0.807320 | 5.353693e-50 | -8.615850e-47 |
| Msa0735010 | Msa0880910 | 0.830278 | 3.213021e-55 | -8.615850e-47 |
| Msa0735010 | Msa0882780 | 0.802450 | 5.578923e-49 | -8.615850e-47 |
| Msa0735010 | Msa0909260 | 0.846014 | 2.834183e-59 | -8.615850e-47 |
| Msa0735010 | Msa0910170 | 0.828190 | 1.031518e-54 | -8.615850e-47 |
| Msa0735010 | Msa0913520 | 0.812527 | 4.054032e-51 | -8.615850e-47 |
| Msa0735010 | Msa0941150 | -0.802653 | 5.064983e-49 | -8.615850e-47 |
| Msa0735010 | Msa0966830 | 0.800670 | 1.292769e-48 | -8.615850e-47 |
| Msa0735010 | Msa0967780 | 0.827499 | 1.512272e-54 | -8.615850e-47 |
| Msa0735010 | Msa0968180 | 0.831543 | 1.572690e-55 | -8.615850e-47 |
| Msa0735010 | Msa0984520 | 0.803768 | 2.977956e-49 | -8.615850e-47 |
| Msa0735010 | Msa0987020 | 0.811470 | 6.888527e-51 | -8.615850e-47 |
| Msa0735010 | Msa1002820 | 0.800801 | 1.215232e-48 | -8.615850e-47 |
| Msa0735010 | Msa1015560 | 0.819852 | 9.344504e-53 | -8.615850e-47 |
| Msa0735010 | Msa1022420 | 0.803602 | 3.222694e-49 | -8.615850e-47 |
| Msa0735010 | Msa1029820 | 0.836507 | 8.984835e-57 | -8.615850e-47 |
| Msa0735010 | Msa1029840 | 0.805785 | 1.128895e-49 | -8.615850e-47 |
| Msa0735010 | Msa1041060 | 0.803398 | 3.553793e-49 | -8.615850e-47 |
| Msa0735010 | Msa1052730 | 0.808335 | 3.256986e-50 | -8.615850e-47 |
| Msa0735010 | Msa1055180 | 0.809585 | 1.759196e-50 | -8.615850e-47 |
| Msa0735010 | Msa1057620 | -0.826242 | 3.020577e-54 | -8.615850e-47 |
| Msa0735010 | Msa1068730 | 0.814432 | 1.545647e-51 | -8.615850e-47 |
| Msa0735010 | Msa1068940 | 0.841863 | 3.669795e-58 | -8.615850e-47 |
| Msa0735010 | Msa1075030 | 0.810362 | 1.196745e-50 | -8.615850e-47 |
| Msa0735010 | Msa1079820 | 0.816494 | 5.372741e-52 | -8.615850e-47 |
| Msa0735010 | Msa1088740 | -0.818910 | 1.531496e-52 | -8.615850e-47 |
| Msa0735010 | Msa1101980 | -0.800105 | 1.684247e-48 | -8.615850e-47 |
| Msa0735010 | Msa1111910 | 0.834258 | 3.325111e-56 | -8.615850e-47 |
| Msa0735010 | Msa1115600 | 0.805088 | 1.580700e-49 | -8.615850e-47 |
| Msa0735010 | Msa1127200 | 0.804348 | 2.255558e-49 | -8.615850e-47 |
| Msa0735010 | Msa1133750 | 0.814495 | 1.496662e-51 | -8.615850e-47 |
| Msa0735010 | Msa1149910 | 0.814375 | 1.590492e-51 | -8.615850e-47 |
| Msa0735010 | Msa1154320 | 0.809890 | 1.513105e-50 | -8.615850e-47 |
| Msa0735010 | Msa1156710 | 0.834192 | 3.454741e-56 | -8.615850e-47 |
| Msa0735010 | Msa1156730 | 0.813586 | 2.375103e-51 | -8.615850e-47 |
| Msa0735010 | Msa1162370 | 0.822355 | 2.476371e-53 | -8.615850e-47 |
| Msa0735010 | Msa1164680 | 0.840142 | 1.038789e-57 | -8.615850e-47 |
| Msa0735010 | Msa1165460 | 0.814946 | 1.188743e-51 | -8.615850e-47 |
| Msa0735010 | Msa1190350 | -0.822068 | 2.886285e-53 | -8.615850e-47 |
| Msa0735010 | Msa1192360 | 0.827212 | 1.771870e-54 | -8.615850e-47 |
| Msa0735010 | Msa1206920 | 0.837539 | 4.896304e-57 | -8.615850e-47 |
| Msa0735010 | Msa1217890 | 0.822332 | 2.506465e-53 | -8.615850e-47 |
| Msa0735010 | Msa1220720 | 0.836039 | 1.181877e-56 | -8.615850e-47 |
| Msa0735010 | Msa1231440 | 0.805860 | 1.088830e-49 | -8.615850e-47 |
| Msa0735010 | Msa1242130 | 0.828369 | 9.339256e-55 | -8.615850e-47 |
| Msa0735010 | Msa1242160 | 0.843291 | 1.533510e-58 | -8.615850e-47 |
| Msa0735010 | Msa1246830 | 0.803045 | 4.203819e-49 | -8.615850e-47 |
| Msa0735010 | Msa1250610 | 0.820644 | 6.152833e-53 | -8.615850e-47 |
| Msa0735010 | Msa1250660 | 0.856071 | 4.122455e-62 | -8.615850e-47 |
| Msa0735010 | Msa1253520 | 0.805155 | 1.530269e-49 | -8.615850e-47 |
| Msa0735010 | Msa1255710 | 0.812540 | 4.026762e-51 | -8.615850e-47 |
| Msa0735010 | Msa1257200 | 0.847945 | 8.385338e-60 | -8.615850e-47 |
| Msa0735010 | Msa1265570 | 0.842319 | 2.780630e-58 | -8.615850e-47 |
| Msa0735010 | Msa1278000 | 0.806900 | 6.570850e-50 | -8.615850e-47 |
| Msa0735010 | Msa1281780 | 0.804486 | 2.110929e-49 | -8.615850e-47 |
| Msa0735010 | Msa1283930 | 0.828868 | 7.077380e-55 | -8.615850e-47 |
| Msa0735010 | Msa1283980 | 0.851675 | 7.605832e-61 | -8.615850e-47 |
| Msa0735010 | Msa1284020 | 0.832956 | 7.030554e-56 | -8.615850e-47 |
| Msa0735010 | Msa1288070 | 0.830021 | 3.712998e-55 | -8.615850e-47 |
| Msa0735010 | Msa1321010 | 0.824213 | 9.118914e-54 | -8.615850e-47 |
| Msa0735010 | Msa1322500 | 0.802441 | 5.601012e-49 | -8.615850e-47 |
| Msa0735010 | Msa1322960 | 0.835054 | 2.097473e-56 | -8.615850e-47 |
| Msa0735010 | Msa1322980 | 0.847825 | 9.049260e-60 | -8.615850e-47 |
| Msa0735010 | Msa1326640 | 0.831126 | 1.991407e-55 | -8.615850e-47 |
| Msa0735010 | Msa1326680 | 0.820320 | 7.301297e-53 | -8.615850e-47 |
| Msa0735010 | Msa1328280 | 0.809486 | 1.848043e-50 | -8.615850e-47 |
| Msa0735010 | Msa1331570 | -0.806126 | 9.567842e-50 | -8.615850e-47 |
| Msa0735010 | Msa1334670 | 0.848669 | 5.290926e-60 | -8.615850e-47 |
| Msa0735010 | Msa1362590 | 0.829757 | 4.304396e-55 | -8.615850e-47 |
| Msa0735010 | Msa1363010 | 0.801328 | 9.484062e-49 | -8.615850e-47 |
| Msa0735010 | Msa1365230 | 0.843457 | 1.385085e-58 | -8.615850e-47 |
| Msa0735010 | Msa1366140 | -0.817466 | 3.250505e-52 | -8.615850e-47 |
| Msa0735010 | Msa1368390 | 0.802128 | 6.497996e-49 | -8.615850e-47 |
| Msa0735010 | Msa1368420 | 0.819878 | 9.217646e-53 | -8.615850e-47 |
| Msa0735010 | Msa1381010 | 0.830473 | 2.879383e-55 | -8.615850e-47 |
| Msa0735010 | Msa1381030 | 0.807836 | 4.160031e-50 | -8.615850e-47 |
| Msa0735010 | Msa1383220 | 0.817622 | 2.996631e-52 | -8.615850e-47 |
| Msa0735010 | Msa1385260 | 0.819487 | 1.131882e-52 | -8.615850e-47 |
| Msa0735010 | Msa1387450 | -0.822081 | 2.866343e-53 | -8.615850e-47 |
| Msa0735010 | Msa1405830 | 0.811578 | 6.528564e-51 | -8.615850e-47 |
| Msa0735010 | Msa1407810 | 0.838183 | 3.346121e-57 | -8.615850e-47 |
| Msa0735010 | Msa1409600 | 0.804772 | 1.840169e-49 | -8.615850e-47 |
| Msa0735010 | Msa1417220 | 0.806971 | 6.348063e-50 | -8.615850e-47 |
| Msa0735010 | Msa1433360 | 0.846598 | 1.963612e-59 | -8.615850e-47 |
| Msa0735010 | Msa1437780 | 0.839131 | 1.903513e-57 | -8.615850e-47 |
| Msa0735010 | Msa1438510 | 0.864478 | 1.181672e-64 | -8.615850e-47 |
| Msa0735010 | Msa1440430 | 0.801210 | 1.002481e-48 | -8.615850e-47 |
| Msa0735010 | Msa1445530 | 0.833789 | 4.358922e-56 | -8.615850e-47 |
| Msa0735010 | Msa1455360 | 0.802407 | 5.693331e-49 | -8.615850e-47 |
| Msa0735010 | Msa1462610 | 0.806066 | 9.854355e-50 | -8.615850e-47 |
| Msa0132080 | Msa0735010 | -0.804773 | 1.839149e-49 | -8.615850e-47 |
| Msa0139500 | Msa0735010 | 0.831798 | 1.361205e-55 | -8.615850e-47 |
| Msa0150000 | Msa0735010 | 0.802314 | 5.951044e-49 | -8.615850e-47 |
| Msa0206370 | Msa0735010 | 0.850577 | 1.552297e-60 | -8.615850e-47 |
| Msa0221180 | Msa0735010 | 0.803480 | 3.416246e-49 | -8.615850e-47 |
| Msa0230920 | Msa0735010 | 0.812155 | 4.888399e-51 | -8.615850e-47 |
| Msa0371350 | Msa0735010 | -0.828763 | 7.503150e-55 | -8.615850e-47 |
| Msa0386540 | Msa0735010 | 0.806047 | 9.943196e-50 | -8.615850e-47 |
| Msa0386560 | Msa0735010 | 0.821857 | 3.230686e-53 | -8.615850e-47 |
| Msa0386880 | Msa0735010 | 0.810855 | 9.366280e-51 | -8.615850e-47 |
| Msa0386910 | Msa0735010 | 0.826103 | 3.258857e-54 | -8.615850e-47 |
| Msa0401060 | Msa0735010 | 0.806042 | 9.967797e-50 | -8.615850e-47 |
| Msa0419420 | Msa0735010 | -0.812151 | 4.896417e-51 | -8.615850e-47 |
| Msa0437480 | Msa0735010 | 0.835470 | 1.646891e-56 | -8.615850e-47 |
| Msa0440350 | Msa0735010 | 0.807377 | 5.208174e-50 | -8.615850e-47 |
| Msa0481670 | Msa0735010 | 0.823857 | 1.105230e-53 | -8.615850e-47 |
| Msa0240590 | Msa0735010 | -0.811571 | 6.549576e-51 | -8.615850e-47 |
| Msa0244310 | Msa0735010 | 0.803997 | 2.668215e-49 | -8.615850e-47 |
| Msa0256980 | Msa0735010 | 0.827593 | 1.436059e-54 | -8.615850e-47 |
| Msa0260980 | Msa0735010 | 0.814140 | 1.792981e-51 | -8.615850e-47 |
| Msa0262750 | Msa0735010 | 0.811547 | 6.628282e-51 | -8.615850e-47 |
| Msa0264890 | Msa0735010 | 0.800563 | 1.358987e-48 | -8.615850e-47 |
| Msa0269220 | Msa0735010 | -0.819756 | 9.826974e-53 | -8.615850e-47 |
| Msa0279090 | Msa0735010 | -0.801495 | 8.765840e-49 | -8.615850e-47 |
| Msa0279810 | Msa0735010 | 0.802042 | 6.767538e-49 | -8.615850e-47 |
| Msa0282830 | Msa0735010 | 0.849122 | 3.959502e-60 | -8.615850e-47 |
| Msa0285420 | Msa0735010 | 0.804585 | 2.013128e-49 | -8.615850e-47 |
| Msa0296300 | Msa0735010 | 0.812410 | 4.299883e-51 | -8.615850e-47 |
| Msa0300470 | Msa0735010 | 0.812884 | 3.386333e-51 | -8.615850e-47 |
| Msa0303900 | Msa0735010 | 0.800984 | 1.115292e-48 | -8.615850e-47 |
| Msa0307630 | Msa0735010 | 0.805410 | 1.353203e-49 | -8.615850e-47 |
| Msa0316000 | Msa0735010 | 0.808008 | 3.823619e-50 | -8.615850e-47 |
| Msa0318490 | Msa0735010 | 0.804321 | 2.285094e-49 | -8.615850e-47 |
| Msa0321240 | Msa0735010 | 0.818607 | 1.794880e-52 | -8.615850e-47 |
| Msa0333770 | Msa0735010 | 0.811429 | 7.033672e-51 | -8.615850e-47 |
| Msa0336430 | Msa0735010 | 0.823281 | 1.507088e-53 | -8.615850e-47 |
| Msa0336460 | Msa0735010 | 0.827456 | 1.549175e-54 | -8.615850e-47 |
| Msa0336520 | Msa0735010 | 0.812812 | 3.511968e-51 | -8.615850e-47 |
| Msa0337970 | Msa0735010 | 0.815217 | 1.035139e-51 | -8.615850e-47 |
| Msa0340270 | Msa0735010 | 0.828712 | 7.718820e-55 | -8.615850e-47 |
| Msa0354840 | Msa0735010 | 0.824645 | 7.215272e-54 | -8.615850e-47 |
| Msa0357470 | Msa0735010 | 0.807813 | 4.208153e-50 | -8.615850e-47 |
| Msa0357510 | Msa0735010 | 0.810423 | 1.161449e-50 | -8.615850e-47 |
| Msa0357530 | Msa0735010 | 0.804967 | 1.675011e-49 | -8.615850e-47 |
| Msa0357550 | Msa0735010 | 0.818708 | 1.702353e-52 | -8.615850e-47 |
| Msa0357560 | Msa0735010 | 0.822052 | 2.911902e-53 | -8.615850e-47 |
| Msa0496380 | Msa0735010 | 0.808042 | 3.761839e-50 | -8.615850e-47 |
| Msa0500920 | Msa0735010 | 0.819145 | 1.354069e-52 | -8.615850e-47 |
| Msa0523550 | Msa0735010 | 0.829079 | 6.291332e-55 | -8.615850e-47 |
| Msa0523720 | Msa0735010 | 0.812626 | 3.856854e-51 | -8.615850e-47 |
| Msa0540640 | Msa0735010 | 0.809989 | 1.440275e-50 | -8.615850e-47 |
| Msa0549130 | Msa0735010 | 0.806995 | 6.273857e-50 | -8.615850e-47 |
| Msa0549170 | Msa0735010 | 0.806028 | 1.003437e-49 | -8.615850e-47 |
| Msa0549960 | Msa0735010 | 0.833683 | 4.633249e-56 | -8.615850e-47 |
| Msa0549970 | Msa0735010 | 0.823266 | 1.519678e-53 | -8.615850e-47 |
| Msa0556720 | Msa0735010 | 0.802704 | 4.944533e-49 | -8.615850e-47 |
| Msa0566280 | Msa0735010 | 0.837442 | 5.186966e-57 | -8.615850e-47 |
| Msa0567330 | Msa0735010 | 0.835855 | 1.316069e-56 | -8.615850e-47 |
| Msa0567570 | Msa0735010 | 0.836284 | 1.024375e-56 | -8.615850e-47 |
| Msa0576320 | Msa0735010 | 0.825338 | 4.950404e-54 | -8.615850e-47 |
| Msa0587730 | Msa0735010 | 0.815379 | 9.526637e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735010 | MtrunA17_Chr5g0432241 | 93.333 | 360 | 24 | 0 | 1 | 360 | 1 | 360 | 0.0 | 697 |
| Msa0735010 | MtrunA17_Chr5g0432301 | 84.401 | 359 | 56 | 0 | 1 | 359 | 1 | 359 | 0.0 | 639 |
| Msa0735010 | MtrunA17_Chr5g0432251 | 82.222 | 360 | 63 | 1 | 1 | 360 | 1 | 359 | 0.0 | 618 |
| Msa0735010 | MtrunA17_Chr5g0432211 | 77.222 | 360 | 67 | 2 | 1 | 360 | 1 | 345 | 0.0 | 573 |
| Msa0735010 | MtrunA17_Chr5g0432261 | 74.167 | 360 | 60 | 3 | 1 | 360 | 1 | 327 | 0.0 | 541 |
| Msa0735010 | MtrunA17_Chr4g0040621 | 63.989 | 361 | 123 | 5 | 1 | 360 | 15 | 369 | 2.15e-169 | 476 |
| Msa0735010 | MtrunA17_Chr4g0014681 | 50.000 | 366 | 174 | 6 | 1 | 360 | 1 | 363 | 6.52e-118 | 345 |
| Msa0735010 | MtrunA17_Chr4g0014561 | 49.454 | 366 | 176 | 6 | 1 | 360 | 1 | 363 | 4.46e-116 | 341 |
| Msa0735010 | MtrunA17_Chr4g0046361 | 46.742 | 353 | 182 | 5 | 12 | 360 | 11 | 361 | 2.78e-115 | 339 |
| Msa0735010 | MtrunA17_Chr1g0188391 | 46.027 | 365 | 188 | 7 | 1 | 360 | 1 | 361 | 7.31e-113 | 333 |
| Msa0735010 | MtrunA17_Chr4g0014641 | 48.626 | 364 | 176 | 6 | 3 | 360 | 5 | 363 | 1.47e-112 | 332 |
| Msa0735010 | MtrunA17_Chr7g0219141 | 46.307 | 352 | 181 | 5 | 12 | 360 | 11 | 357 | 4.35e-112 | 330 |
| Msa0735010 | MtrunA17_Chr4g0046341 | 47.753 | 356 | 177 | 5 | 12 | 360 | 11 | 364 | 4.13e-109 | 323 |
| Msa0735010 | MtrunA17_Chr7g0223241 | 45.531 | 358 | 185 | 5 | 1 | 358 | 1 | 348 | 4.93e-108 | 320 |
| Msa0735010 | MtrunA17_Chr7g0223231 | 44.413 | 358 | 189 | 5 | 1 | 358 | 1 | 348 | 5.62e-108 | 320 |
| Msa0735010 | MtrunA17_Chr7g0219161 | 46.628 | 341 | 174 | 5 | 11 | 348 | 10 | 345 | 1.18e-107 | 319 |
| Msa0735010 | MtrunA17_Chr4g0014661 | 45.730 | 363 | 186 | 6 | 1 | 360 | 3 | 357 | 1.45e-98 | 296 |
| Msa0735010 | MtrunA17_Chr4g0046531 | 44.413 | 358 | 194 | 4 | 3 | 359 | 2 | 355 | 1.72e-98 | 307 |
| Msa0735010 | MtrunA17_Chr4g0046531 | 44.011 | 359 | 196 | 4 | 3 | 360 | 364 | 718 | 3.37e-98 | 306 |
| Msa0735010 | MtrunA17_Chr1g0188371 | 42.478 | 339 | 190 | 4 | 5 | 340 | 4 | 340 | 1.30e-94 | 286 |
| Msa0735010 | MtrunA17_Chr4g0014591 | 44.353 | 363 | 191 | 6 | 1 | 360 | 3 | 357 | 1.96e-94 | 285 |
| Msa0735010 | MtrunA17_Chr3g0121301 | 37.389 | 337 | 204 | 4 | 21 | 356 | 27 | 357 | 2.57e-77 | 242 |
| Msa0735010 | MtrunA17_Chr4g0021981 | 39.429 | 350 | 202 | 7 | 15 | 360 | 25 | 368 | 9.95e-77 | 240 |
| Msa0735010 | MtrunA17_Chr4g0022021 | 38.000 | 350 | 207 | 6 | 15 | 360 | 25 | 368 | 4.45e-70 | 223 |
| Msa0735010 | MtrunA17_Chr4g0014601 | 41.132 | 265 | 146 | 5 | 1 | 262 | 3 | 260 | 2.62e-67 | 213 |
| Msa0735010 | MtrunA17_Chr7g0276401 | 32.424 | 330 | 209 | 9 | 32 | 355 | 47 | 368 | 3.70e-47 | 164 |
| Msa0735010 | MtrunA17_Chr8g0367441 | 31.118 | 331 | 189 | 7 | 32 | 341 | 46 | 358 | 1.32e-46 | 162 |
| Msa0735010 | MtrunA17_Chr7g0219171 | 55.970 | 134 | 57 | 2 | 227 | 360 | 117 | 248 | 3.78e-46 | 157 |
| Msa0735010 | MtrunA17_Chr7g0219171 | 45.455 | 110 | 56 | 1 | 12 | 121 | 11 | 116 | 3.31e-22 | 94.4 |
| Msa0735010 | MtrunA17_Chr7g0276411 | 30.675 | 326 | 207 | 10 | 31 | 345 | 30 | 347 | 4.42e-45 | 158 |
| Msa0735010 | MtrunA17_Chr3g0128011 | 30.247 | 324 | 209 | 9 | 32 | 346 | 88 | 403 | 2.05e-44 | 158 |
| Msa0735010 | MtrunA17_Chr5g0448091 | 29.969 | 327 | 209 | 9 | 32 | 347 | 33 | 350 | 2.33e-44 | 156 |
| Msa0735010 | MtrunA17_Chr8g0367501 | 28.852 | 357 | 195 | 8 | 20 | 345 | 20 | 348 | 9.96e-44 | 156 |
| Msa0735010 | MtrunA17_Chr8g0367491 | 31.420 | 331 | 204 | 7 | 30 | 345 | 39 | 361 | 3.29e-43 | 154 |
| Msa0735010 | MtrunA17_Chr8g0345851 | 34.409 | 279 | 166 | 8 | 86 | 359 | 23 | 289 | 1.51e-42 | 149 |
| Msa0735010 | MtrunA17_Chr8g0367451 | 30.503 | 318 | 208 | 7 | 32 | 341 | 45 | 357 | 3.52e-42 | 150 |
| Msa0735010 | MtrunA17_Chr1g0200491 | 28.313 | 332 | 220 | 7 | 27 | 347 | 34 | 358 | 7.07e-42 | 150 |
| Msa0735010 | MtrunA17_Chr1g0163611 | 31.070 | 383 | 210 | 13 | 5 | 359 | 13 | 369 | 9.18e-41 | 147 |
| Msa0735010 | MtrunA17_Chr1g0163601 | 29.921 | 381 | 233 | 11 | 1 | 359 | 1 | 369 | 4.51e-40 | 145 |
| Msa0735010 | MtrunA17_Chr7g0218301 | 28.531 | 354 | 214 | 11 | 27 | 355 | 34 | 373 | 5.10e-40 | 145 |
| Msa0735010 | MtrunA17_Chr3g0085201 | 29.972 | 357 | 224 | 11 | 1 | 346 | 1 | 342 | 1.03e-39 | 144 |
| Msa0735010 | MtrunA17_Chr7g0218271 | 29.392 | 296 | 184 | 8 | 74 | 355 | 89 | 373 | 2.89e-39 | 143 |
| Msa0735010 | MtrunA17_Chr7g0218261 | 28.446 | 341 | 225 | 9 | 27 | 355 | 33 | 366 | 3.84e-39 | 142 |
| Msa0735010 | MtrunA17_Chr2g0307521 | 30.120 | 249 | 159 | 6 | 115 | 359 | 125 | 362 | 2.54e-38 | 140 |
| Msa0735010 | MtrunA17_Chr3g0085211 | 30.938 | 320 | 209 | 8 | 34 | 347 | 43 | 356 | 2.00e-37 | 138 |
| Msa0735010 | MtrunA17_Chr7g0218131 | 27.356 | 329 | 225 | 8 | 27 | 347 | 34 | 356 | 1.11e-36 | 136 |
| Msa0735010 | MtrunA17_Chr1g0163621 | 29.518 | 332 | 218 | 8 | 26 | 347 | 44 | 369 | 2.94e-36 | 135 |
| Msa0735010 | MtrunA17_Chr8g0367381 | 37.500 | 184 | 105 | 5 | 147 | 327 | 149 | 325 | 3.41e-36 | 134 |
| Msa0735010 | MtrunA17_Chr7g0218181 | 29.388 | 245 | 167 | 4 | 116 | 359 | 127 | 366 | 5.20e-36 | 134 |
| Msa0735010 | MtrunA17_Chr7g0218211 | 26.531 | 343 | 235 | 9 | 27 | 359 | 33 | 368 | 1.92e-35 | 132 |
| Msa0735010 | MtrunA17_Chr2g0314271 | 30.218 | 321 | 209 | 8 | 32 | 345 | 27 | 339 | 1.46e-34 | 130 |
| Msa0735010 | MtrunA17_Chr3g0130061 | 27.714 | 350 | 233 | 11 | 8 | 345 | 2 | 343 | 3.19e-31 | 121 |
| Msa0735010 | MtrunA17_Chr3g0130011 | 28.000 | 350 | 232 | 12 | 8 | 345 | 2 | 343 | 2.18e-30 | 119 |
| Msa0735010 | MtrunA17_Chr4g0014611 | 57.426 | 101 | 42 | 1 | 260 | 360 | 8 | 107 | 4.84e-21 | 87.0 |
| Msa0735010 | MtrunA17_Chr6g0482291 | 32.000 | 175 | 103 | 6 | 173 | 345 | 1 | 161 | 5.20e-21 | 89.0 |
| Msa0735010 | MtrunA17_Chr8g0367401 | 37.273 | 110 | 68 | 1 | 150 | 259 | 2 | 110 | 6.92e-21 | 87.8 |
| Msa0735010 | MtrunA17_Chr8g0367461 | 44.330 | 97 | 51 | 1 | 246 | 342 | 1 | 94 | 6.30e-20 | 84.3 |
| Msa0735010 | MtrunA17_Chr4g0014671 | 56.604 | 106 | 45 | 1 | 255 | 360 | 30 | 134 | 2.53e-18 | 80.5 |
| Msa0735010 | MtrunA17_Chr8g0367421 | 33.636 | 110 | 55 | 3 | 150 | 259 | 2 | 93 | 8.16e-15 | 70.5 |
| Msa0735010 | MtrunA17_Chr4g0011691 | 42.268 | 97 | 51 | 4 | 261 | 356 | 140 | 232 | 1.19e-13 | 69.7 |
| Msa0735010 | MtrunA17_Chr4g0011691 | 29.771 | 131 | 75 | 4 | 16 | 143 | 22 | 138 | 4.93e-11 | 62.4 |
| Msa0735010 | MtrunA17_Chr8g0367391 | 44.706 | 85 | 40 | 4 | 259 | 341 | 36 | 115 | 2.56e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735010 | AT4G35160.1 | 34.771 | 371 | 221 | 9 | 4 | 359 | 16 | 380 | 5.49e-66 | 214 |
| Msa0735010 | AT4G35150.1 | 33.243 | 367 | 189 | 9 | 4 | 359 | 2 | 323 | 1.69e-60 | 197 |
| Msa0735010 | AT1G51990.2 | 33.553 | 304 | 190 | 7 | 63 | 360 | 65 | 362 | 5.40e-48 | 166 |
| Msa0735010 | AT1G51990.1 | 33.553 | 304 | 190 | 7 | 63 | 360 | 65 | 362 | 6.67e-48 | 166 |
| Msa0735010 | AT5G54160.1 | 31.562 | 320 | 208 | 8 | 32 | 346 | 34 | 347 | 1.85e-47 | 165 |
| Msa0735010 | AT1G33030.1 | 33.231 | 325 | 198 | 12 | 32 | 346 | 21 | 336 | 2.77e-42 | 151 |
| Msa0735010 | AT1G77520.1 | 28.418 | 373 | 240 | 10 | 2 | 359 | 20 | 380 | 1.17e-40 | 147 |
| Msa0735010 | AT3G53140.1 | 30.887 | 327 | 204 | 10 | 32 | 345 | 27 | 344 | 3.40e-39 | 143 |
| Msa0735010 | AT5G53810.1 | 31.897 | 348 | 211 | 13 | 30 | 359 | 38 | 377 | 1.84e-36 | 136 |
| Msa0735010 | AT1G63140.2 | 29.491 | 373 | 236 | 11 | 2 | 359 | 20 | 380 | 8.91e-34 | 129 |
| Msa0735010 | AT1G63140.4 | 29.491 | 373 | 236 | 11 | 2 | 359 | 40 | 400 | 1.08e-33 | 129 |
| Msa0735010 | AT1G21130.1 | 29.429 | 333 | 204 | 12 | 32 | 346 | 40 | 359 | 1.70e-33 | 128 |
| Msa0735010 | AT1G77530.1 | 30.027 | 373 | 234 | 11 | 2 | 359 | 20 | 380 | 2.12e-33 | 128 |
| Msa0735010 | AT1G21110.1 | 28.267 | 329 | 205 | 12 | 32 | 342 | 40 | 355 | 2.34e-30 | 119 |
| Msa0735010 | AT5G37170.2 | 33.803 | 213 | 129 | 7 | 151 | 359 | 29 | 233 | 2.67e-30 | 116 |
| Msa0735010 | AT1G21100.1 | 27.928 | 333 | 209 | 12 | 32 | 346 | 40 | 359 | 5.15e-30 | 118 |
| Msa0735010 | AT1G21120.1 | 28.228 | 333 | 208 | 12 | 32 | 346 | 40 | 359 | 5.69e-30 | 118 |
| Msa0735010 | AT5G37170.1 | 33.803 | 213 | 129 | 7 | 151 | 359 | 129 | 333 | 8.22e-30 | 117 |
| Msa0735010 | AT1G21120.2 | 28.228 | 333 | 208 | 12 | 32 | 346 | 88 | 407 | 1.26e-29 | 118 |
| Msa0735010 | AT1G62900.1 | 35.577 | 208 | 129 | 3 | 153 | 359 | 1 | 204 | 3.10e-29 | 112 |
| Msa0735010 | AT1G76790.1 | 27.190 | 331 | 206 | 10 | 32 | 341 | 30 | 346 | 1.86e-28 | 114 |
| Msa0735010 | AT5G37170.3 | 34.946 | 186 | 109 | 6 | 181 | 359 | 5 | 185 | 9.05e-27 | 105 |
| Msa0735010 | AT1G33030.2 | 29.661 | 236 | 154 | 8 | 32 | 259 | 21 | 252 | 6.74e-20 | 88.6 |
| Msa0735010 | AT1G33030.3 | 29.661 | 236 | 154 | 8 | 32 | 259 | 21 | 252 | 9.93e-20 | 88.2 |
| Msa0735010 | AT1G63140.1 | 26.471 | 272 | 177 | 9 | 2 | 259 | 40 | 302 | 1.69e-14 | 73.9 |
| Msa0735010 | AT1G21130.2 | 27.160 | 243 | 154 | 8 | 32 | 259 | 40 | 274 | 2.42e-12 | 67.4 |
Find 68 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACATTCTCTTCATTATTT+TGG | 0.038167 | 5_1:-50004969 | None:intergenic |
| CTTAAATGTGTTGTTGATTT+AGG | 0.154523 | 5_1:+50005060 | Msa0735010:CDS |
| CGACACACGGGATGTTGATA+TGG | 0.233179 | 5_1:+50005406 | Msa0735010:CDS |
| AGAGACCTTAAGCCTAAAAT+TGG | 0.252210 | 5_1:-50006108 | None:intergenic |
| CCATAATTGTGTATGATATC+AGG | 0.254841 | 5_1:-50005087 | None:intergenic |
| CCTGATATCATACACAATTA+TGG | 0.284388 | 5_1:+50005087 | Msa0735010:CDS |
| ATGCGAATAATGACTCATTC+TGG | 0.312409 | 5_1:+50005186 | Msa0735010:CDS |
| CGTGGCATCAATTCTCTACT+TGG | 0.365039 | 5_1:+50005352 | Msa0735010:CDS |
| GCTTTGAGCTTTGAGTAAAT+TGG | 0.373576 | 5_1:-50004995 | None:intergenic |
| TGCAGTGGATATTGCATGAT+TGG | 0.384572 | 5_1:+50005839 | Msa0735010:intron |
| TGCCACGGGTTTGTCAAAAC+TGG | 0.395490 | 5_1:-50005336 | None:intergenic |
| TGCTAAATCATTCCCACAAA+TGG | 0.411413 | 5_1:+50005596 | Msa0735010:CDS |
| ATTCAATGGATTGGAGTCAT+TGG | 0.421743 | 5_1:+50005533 | Msa0735010:CDS |
| TCAAAGCTCAAAGCCACATA+TGG | 0.423149 | 5_1:+50005004 | Msa0735010:CDS |
| AAGAGAGAAACGAGAAAGAA+TGG | 0.424421 | 5_1:+50006040 | Msa0735010:CDS |
| TGCATCCGTATTACTACTTA+AGG | 0.425584 | 5_1:+50005269 | Msa0735010:CDS |
| TTGGAGTCATTGGTTGATGT+TGG | 0.427653 | 5_1:+50005543 | Msa0735010:CDS |
| AACAAAATGGCGTCTGTTGG+AGG | 0.433773 | 5_1:-50005711 | None:intergenic |
| TTTGTTGATTGAAAAGTGTA+GGG | 0.454603 | 5_1:+50005506 | Msa0735010:CDS |
| GTTGATGTTGGAGGAGGCAC+AGG | 0.457563 | 5_1:+50005555 | Msa0735010:CDS |
| ATTGTCCTTAAGTAGTAATA+CGG | 0.459915 | 5_1:-50005274 | None:intergenic |
| AGTGAGAATTTAAACTATGT+TGG | 0.463618 | 5_1:+50005666 | Msa0735010:CDS |
| CTTCTTTGATATGTTGATGA+TGG | 0.474685 | 5_1:+50006002 | Msa0735010:CDS |
| AAGACACTGCACTCCATTTG+TGG | 0.477005 | 5_1:-50005609 | None:intergenic |
| TGTGTCGTTTCAAATGTTGT+AGG | 0.487417 | 5_1:-50005390 | None:intergenic |
| ATTAAGTTGATTTCTTCAGC+TGG | 0.488945 | 5_1:+50006063 | Msa0735010:CDS |
| ACGAATGGCGTCACGCTCAT+TGG | 0.491626 | 5_1:-50005297 | None:intergenic |
| TAGGGGAGTATTCAATGGAT+TGG | 0.495288 | 5_1:+50005524 | Msa0735010:CDS |
| GACACACGGGATGTTGATAT+GGG | 0.503724 | 5_1:+50005407 | Msa0735010:CDS |
| AAGTGTAGGGGAGTATTCAA+TGG | 0.504991 | 5_1:+50005519 | Msa0735010:CDS |
| CATGTTGTCGATGGCTTGCA+AGG | 0.506491 | 5_1:+50005642 | Msa0735010:CDS |
| GATCTCCCACATGTTGTCGA+TGG | 0.507007 | 5_1:+50005633 | Msa0735010:CDS |
| TGAAAATGTGATTCCATATG+TGG | 0.508708 | 5_1:-50005017 | None:intergenic |
| AAACTTATTCAATGAGTCCA+TGG | 0.509220 | 5_1:+50005458 | Msa0735010:CDS |
| ATAGCAAAGAAAGGTAAAGA+AGG | 0.509576 | 5_1:+50005907 | Msa0735010:CDS |
| AGACACTGCACTCCATTTGT+GGG | 0.511364 | 5_1:-50005608 | None:intergenic |
| GAGAATTTAAACTATGTTGG+TGG | 0.520299 | 5_1:+50005669 | Msa0735010:CDS |
| TTCAACAAAATGGCGTCTGT+TGG | 0.520911 | 5_1:-50005714 | None:intergenic |
| AGGCACAGGGACCATGGCAA+AGG | 0.525336 | 5_1:+50005569 | Msa0735010:CDS |
| AAAGAAAGGTAAAGAAGGGA+AGG | 0.534278 | 5_1:+50005912 | Msa0735010:CDS |
| ATTTGTTGATTGAAAAGTGT+AGG | 0.534400 | 5_1:+50005505 | Msa0735010:CDS |
| TCGAGCATCGCATGCACGAA+TGG | 0.541584 | 5_1:-50005312 | None:intergenic |
| GAGTCATTGGTTGATGTTGG+AGG | 0.554899 | 5_1:+50005546 | Msa0735010:CDS |
| ATGGTGTTGGAAAGTGAGAA+GGG | 0.555376 | 5_1:+50005949 | Msa0735010:CDS |
| TGCAAGCCATCGACAACATG+TGG | 0.556174 | 5_1:-50005639 | None:intergenic |
| TCATTGGTTGATGTTGGAGG+AGG | 0.559528 | 5_1:+50005549 | Msa0735010:CDS |
| CATGGTGTTGGAAAGTGAGA+AGG | 0.565194 | 5_1:+50005948 | Msa0735010:CDS |
| TTGATGATGGTAGTACTCAC+AGG | 0.567324 | 5_1:+50006015 | Msa0735010:CDS |
| TTTAGCAAGGGCCTTTGCCA+TGG | 0.572788 | 5_1:-50005580 | None:intergenic |
| AACAACACATTTAAGTGACA+TGG | 0.577803 | 5_1:-50005052 | None:intergenic |
| AAGGATGCAATAGCAAAGAA+AGG | 0.578531 | 5_1:+50005898 | Msa0735010:CDS |
| AAGTAGTAATACGGATGCAT+CGG | 0.581276 | 5_1:-50005265 | None:intergenic |
| TAGCAAAGAAAGGTAAAGAA+GGG | 0.583690 | 5_1:+50005908 | Msa0735010:CDS |
| TCATTATTCGCATCAAGCGA+TGG | 0.586198 | 5_1:-50005176 | None:intergenic |
| TTTGTGGGAATGATTTAGCA+AGG | 0.587728 | 5_1:-50005593 | None:intergenic |
| TAATCGAGCATCACTTGCCA+TGG | 0.588822 | 5_1:-50005475 | None:intergenic |
| TTGTGGGAATGATTTAGCAA+GGG | 0.591958 | 5_1:-50005592 | None:intergenic |
| TGGAGGAGGCACAGGGACCA+TGG | 0.591972 | 5_1:+50005563 | Msa0735010:CDS |
| AAGTAGAGAATTGATGCCAC+GGG | 0.597289 | 5_1:-50005350 | None:intergenic |
| GATTGTGATAGACATGGTGT+TGG | 0.599108 | 5_1:+50005936 | Msa0735010:CDS |
| CAAGTAGAGAATTGATGCCA+CGG | 0.608243 | 5_1:-50005351 | None:intergenic |
| ACAACATTTGAAACGACACA+CGG | 0.615695 | 5_1:+50005393 | Msa0735010:CDS |
| TTGTTGATTGAAAAGTGTAG+GGG | 0.631295 | 5_1:+50005507 | Msa0735010:CDS |
| TTGATGTTGGAGGAGGCACA+GGG | 0.656877 | 5_1:+50005556 | Msa0735010:CDS |
| CAACATTTGAAACGACACAC+GGG | 0.671406 | 5_1:+50005394 | Msa0735010:CDS |
| GCAAGCCATCGACAACATGT+GGG | 0.678688 | 5_1:-50005638 | None:intergenic |
| TTTAAATTTAGAGTCACGCG+CGG | 0.701266 | 5_1:-50005436 | None:intergenic |
| GAAGGTGATTGTGATAGACA+TGG | 0.741542 | 5_1:+50005930 | Msa0735010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATGTGTAAAAATATTA+AGG | + | chr5_1:50005869-50005888 | Msa0735010:CDS | 15.0% |
| !! | AAAAATATTAAGGAATTGTA+AGG | + | chr5_1:50005879-50005898 | Msa0735010:CDS | 15.0% |
| !! | ATGAATGTGTAAAAATATTA+AGG | + | chr5_1:50005869-50005888 | Msa0735010:CDS | 15.0% |
| !! | AAAAATATTAAGGAATTGTA+AGG | + | chr5_1:50005879-50005898 | Msa0735010:CDS | 15.0% |
| !!! | AACATTCTCTTCATTATTTT+GGG | - | chr5_1:50004971-50004990 | None:intergenic | 20.0% |
| !!! | AACATTCTCTTCATTATTTT+GGG | - | chr5_1:50004971-50004990 | None:intergenic | 20.0% |
| !! | CAACATTCTCTTCATTATTT+TGG | - | chr5_1:50004972-50004991 | None:intergenic | 25.0% |
| !!! | CTTAAATGTGTTGTTGATTT+AGG | + | chr5_1:50005060-50005079 | Msa0735010:CDS | 25.0% |
| !!! | AATAAGTTTTGAGAGTGATA+TGG | - | chr5_1:50005118-50005137 | None:intergenic | 25.0% |
| ! | ATTGTCCTTAAGTAGTAATA+CGG | - | chr5_1:50005277-50005296 | None:intergenic | 25.0% |
| !! | ACACTTTTCAATCAACAAAT+TGG | - | chr5_1:50005505-50005524 | None:intergenic | 25.0% |
| !! | ATTTGTTGATTGAAAAGTGT+AGG | + | chr5_1:50005505-50005524 | Msa0735010:CDS | 25.0% |
| !! | TTTGTTGATTGAAAAGTGTA+GGG | + | chr5_1:50005506-50005525 | Msa0735010:CDS | 25.0% |
| ! | AGTGAGAATTTAAACTATGT+TGG | + | chr5_1:50005666-50005685 | Msa0735010:CDS | 25.0% |
| !! | ACATTTTACCTTCAACAAAA+TGG | - | chr5_1:50005727-50005746 | None:intergenic | 25.0% |
| !! | TACAAGATTACTCCAATTTT+AGG | + | chr5_1:50006096-50006115 | Msa0735010:CDS | 25.0% |
| !! | CAACATTCTCTTCATTATTT+TGG | - | chr5_1:50004972-50004991 | None:intergenic | 25.0% |
| !!! | CTTAAATGTGTTGTTGATTT+AGG | + | chr5_1:50005060-50005079 | Msa0735010:CDS | 25.0% |
| !!! | AATAAGTTTTGAGAGTGATA+TGG | - | chr5_1:50005118-50005137 | None:intergenic | 25.0% |
| ! | ATTGTCCTTAAGTAGTAATA+CGG | - | chr5_1:50005277-50005296 | None:intergenic | 25.0% |
| !! | ACACTTTTCAATCAACAAAT+TGG | - | chr5_1:50005505-50005524 | None:intergenic | 25.0% |
| !! | ATTTGTTGATTGAAAAGTGT+AGG | + | chr5_1:50005505-50005524 | Msa0735010:CDS | 25.0% |
| !! | TTTGTTGATTGAAAAGTGTA+GGG | + | chr5_1:50005506-50005525 | Msa0735010:CDS | 25.0% |
| ! | AGTGAGAATTTAAACTATGT+TGG | + | chr5_1:50005666-50005685 | Msa0735010:CDS | 25.0% |
| !! | ACATTTTACCTTCAACAAAA+TGG | - | chr5_1:50005727-50005746 | None:intergenic | 25.0% |
| !! | TACAAGATTACTCCAATTTT+AGG | + | chr5_1:50006096-50006115 | Msa0735010:CDS | 25.0% |
| TGAAAATGTGATTCCATATG+TGG | - | chr5_1:50005020-50005039 | None:intergenic | 30.0% | |
| AACAACACATTTAAGTGACA+TGG | - | chr5_1:50005055-50005074 | None:intergenic | 30.0% | |
| CCATAATTGTGTATGATATC+AGG | - | chr5_1:50005090-50005109 | None:intergenic | 30.0% | |
| CCTGATATCATACACAATTA+TGG | + | chr5_1:50005087-50005106 | Msa0735010:CDS | 30.0% | |
| AAACTTATTCAATGAGTCCA+TGG | + | chr5_1:50005458-50005477 | Msa0735010:CDS | 30.0% | |
| ! | TTGTTGATTGAAAAGTGTAG+GGG | + | chr5_1:50005507-50005526 | Msa0735010:CDS | 30.0% |
| GAGAATTTAAACTATGTTGG+TGG | + | chr5_1:50005669-50005688 | Msa0735010:CDS | 30.0% | |
| AAGTCTGAATAAAATTGCAG+TGG | + | chr5_1:50005824-50005843 | Msa0735010:intron | 30.0% | |
| ATAGCAAAGAAAGGTAAAGA+AGG | + | chr5_1:50005907-50005926 | Msa0735010:CDS | 30.0% | |
| TAGCAAAGAAAGGTAAAGAA+GGG | + | chr5_1:50005908-50005927 | Msa0735010:CDS | 30.0% | |
| ! | CTTCTTTGATATGTTGATGA+TGG | + | chr5_1:50006002-50006021 | Msa0735010:CDS | 30.0% |
| !! | ATTAAGTTGATTTCTTCAGC+TGG | + | chr5_1:50006063-50006082 | Msa0735010:CDS | 30.0% |
| ! | TTACTCCAATTTTAGGCTTA+AGG | + | chr5_1:50006103-50006122 | Msa0735010:CDS | 30.0% |
| TGAAAATGTGATTCCATATG+TGG | - | chr5_1:50005020-50005039 | None:intergenic | 30.0% | |
| AACAACACATTTAAGTGACA+TGG | - | chr5_1:50005055-50005074 | None:intergenic | 30.0% | |
| CCATAATTGTGTATGATATC+AGG | - | chr5_1:50005090-50005109 | None:intergenic | 30.0% | |
| CCTGATATCATACACAATTA+TGG | + | chr5_1:50005087-50005106 | Msa0735010:CDS | 30.0% | |
| AAACTTATTCAATGAGTCCA+TGG | + | chr5_1:50005458-50005477 | Msa0735010:CDS | 30.0% | |
| ! | TTGTTGATTGAAAAGTGTAG+GGG | + | chr5_1:50005507-50005526 | Msa0735010:CDS | 30.0% |
| GAGAATTTAAACTATGTTGG+TGG | + | chr5_1:50005669-50005688 | Msa0735010:CDS | 30.0% | |
| AAGTCTGAATAAAATTGCAG+TGG | + | chr5_1:50005824-50005843 | Msa0735010:intron | 30.0% | |
| ATAGCAAAGAAAGGTAAAGA+AGG | + | chr5_1:50005907-50005926 | Msa0735010:CDS | 30.0% | |
| TAGCAAAGAAAGGTAAAGAA+GGG | + | chr5_1:50005908-50005927 | Msa0735010:CDS | 30.0% | |
| ! | CTTCTTTGATATGTTGATGA+TGG | + | chr5_1:50006002-50006021 | Msa0735010:CDS | 30.0% |
| !! | ATTAAGTTGATTTCTTCAGC+TGG | + | chr5_1:50006063-50006082 | Msa0735010:CDS | 30.0% |
| ! | TTACTCCAATTTTAGGCTTA+AGG | + | chr5_1:50006103-50006122 | Msa0735010:CDS | 30.0% |
| !! | GCTTTGAGCTTTGAGTAAAT+TGG | - | chr5_1:50004998-50005017 | None:intergenic | 35.0% |
| !! | CATGTTTTTGAAGGGTGAAT+TGG | - | chr5_1:50005150-50005169 | None:intergenic | 35.0% |
| !! | GGATGAAGCATGTTTTTGAA+GGG | - | chr5_1:50005158-50005177 | None:intergenic | 35.0% |
| !! | TGGATGAAGCATGTTTTTGA+AGG | - | chr5_1:50005159-50005178 | None:intergenic | 35.0% |
| ATGCGAATAATGACTCATTC+TGG | + | chr5_1:50005186-50005205 | Msa0735010:CDS | 35.0% | |
| AAGTAGTAATACGGATGCAT+CGG | - | chr5_1:50005268-50005287 | None:intergenic | 35.0% | |
| TGCATCCGTATTACTACTTA+AGG | + | chr5_1:50005269-50005288 | Msa0735010:CDS | 35.0% | |
| !! | TGTGTCGTTTCAAATGTTGT+AGG | - | chr5_1:50005393-50005412 | None:intergenic | 35.0% |
| ! | ACAACATTTGAAACGACACA+CGG | + | chr5_1:50005393-50005412 | Msa0735010:CDS | 35.0% |
| ! | TTTAAATTTAGAGTCACGCG+CGG | - | chr5_1:50005439-50005458 | None:intergenic | 35.0% |
| !! | ATTCAATGGATTGGAGTCAT+TGG | + | chr5_1:50005533-50005552 | Msa0735010:CDS | 35.0% |
| TTGTGGGAATGATTTAGCAA+GGG | - | chr5_1:50005595-50005614 | None:intergenic | 35.0% | |
| TTTGTGGGAATGATTTAGCA+AGG | - | chr5_1:50005596-50005615 | None:intergenic | 35.0% | |
| TGCTAAATCATTCCCACAAA+TGG | + | chr5_1:50005596-50005615 | Msa0735010:CDS | 35.0% | |
| AAGGATGCAATAGCAAAGAA+AGG | + | chr5_1:50005898-50005917 | Msa0735010:CDS | 35.0% | |
| AAAGAAAGGTAAAGAAGGGA+AGG | + | chr5_1:50005912-50005931 | Msa0735010:CDS | 35.0% | |
| AAGAGAGAAACGAGAAAGAA+TGG | + | chr5_1:50006040-50006059 | Msa0735010:CDS | 35.0% | |
| AGAGACCTTAAGCCTAAAAT+TGG | - | chr5_1:50006111-50006130 | None:intergenic | 35.0% | |
| !! | GCTTTGAGCTTTGAGTAAAT+TGG | - | chr5_1:50004998-50005017 | None:intergenic | 35.0% |
| !! | CATGTTTTTGAAGGGTGAAT+TGG | - | chr5_1:50005150-50005169 | None:intergenic | 35.0% |
| !! | GGATGAAGCATGTTTTTGAA+GGG | - | chr5_1:50005158-50005177 | None:intergenic | 35.0% |
| !! | TGGATGAAGCATGTTTTTGA+AGG | - | chr5_1:50005159-50005178 | None:intergenic | 35.0% |
| ATGCGAATAATGACTCATTC+TGG | + | chr5_1:50005186-50005205 | Msa0735010:CDS | 35.0% | |
| AAGTAGTAATACGGATGCAT+CGG | - | chr5_1:50005268-50005287 | None:intergenic | 35.0% | |
| TGCATCCGTATTACTACTTA+AGG | + | chr5_1:50005269-50005288 | Msa0735010:CDS | 35.0% | |
| !! | TGTGTCGTTTCAAATGTTGT+AGG | - | chr5_1:50005393-50005412 | None:intergenic | 35.0% |
| ! | ACAACATTTGAAACGACACA+CGG | + | chr5_1:50005393-50005412 | Msa0735010:CDS | 35.0% |
| ! | TTTAAATTTAGAGTCACGCG+CGG | - | chr5_1:50005439-50005458 | None:intergenic | 35.0% |
| !! | ATTCAATGGATTGGAGTCAT+TGG | + | chr5_1:50005533-50005552 | Msa0735010:CDS | 35.0% |
| TTGTGGGAATGATTTAGCAA+GGG | - | chr5_1:50005595-50005614 | None:intergenic | 35.0% | |
| TTTGTGGGAATGATTTAGCA+AGG | - | chr5_1:50005596-50005615 | None:intergenic | 35.0% | |
| TGCTAAATCATTCCCACAAA+TGG | + | chr5_1:50005596-50005615 | Msa0735010:CDS | 35.0% | |
| AAGGATGCAATAGCAAAGAA+AGG | + | chr5_1:50005898-50005917 | Msa0735010:CDS | 35.0% | |
| AAAGAAAGGTAAAGAAGGGA+AGG | + | chr5_1:50005912-50005931 | Msa0735010:CDS | 35.0% | |
| AAGAGAGAAACGAGAAAGAA+TGG | + | chr5_1:50006040-50006059 | Msa0735010:CDS | 35.0% | |
| AGAGACCTTAAGCCTAAAAT+TGG | - | chr5_1:50006111-50006130 | None:intergenic | 35.0% | |
| TCAAAGCTCAAAGCCACATA+TGG | + | chr5_1:50005004-50005023 | Msa0735010:CDS | 40.0% | |
| TCATTATTCGCATCAAGCGA+TGG | - | chr5_1:50005179-50005198 | None:intergenic | 40.0% | |
| AAGTAGAGAATTGATGCCAC+GGG | - | chr5_1:50005353-50005372 | None:intergenic | 40.0% | |
| CAAGTAGAGAATTGATGCCA+CGG | - | chr5_1:50005354-50005373 | None:intergenic | 40.0% | |
| ! | CAACATTTGAAACGACACAC+GGG | + | chr5_1:50005394-50005413 | Msa0735010:CDS | 40.0% |
| !! | AAGTGTAGGGGAGTATTCAA+TGG | + | chr5_1:50005519-50005538 | Msa0735010:CDS | 40.0% |
| !! | TAGGGGAGTATTCAATGGAT+TGG | + | chr5_1:50005524-50005543 | Msa0735010:CDS | 40.0% |
| ! | TTGGAGTCATTGGTTGATGT+TGG | + | chr5_1:50005543-50005562 | Msa0735010:CDS | 40.0% |
| TTCAACAAAATGGCGTCTGT+TGG | - | chr5_1:50005717-50005736 | None:intergenic | 40.0% | |
| !! | AACAGACGCCATTTTGTTGA+AGG | + | chr5_1:50005716-50005735 | Msa0735010:CDS | 40.0% |
| TGCAGTGGATATTGCATGAT+TGG | + | chr5_1:50005839-50005858 | Msa0735010:intron | 40.0% | |
| GAAGGTGATTGTGATAGACA+TGG | + | chr5_1:50005930-50005949 | Msa0735010:CDS | 40.0% | |
| GATTGTGATAGACATGGTGT+TGG | + | chr5_1:50005936-50005955 | Msa0735010:CDS | 40.0% | |
| ! | ATGGTGTTGGAAAGTGAGAA+GGG | + | chr5_1:50005949-50005968 | Msa0735010:CDS | 40.0% |
| !! | TTGATGATGGTAGTACTCAC+AGG | + | chr5_1:50006015-50006034 | Msa0735010:CDS | 40.0% |
| TCAAAGCTCAAAGCCACATA+TGG | + | chr5_1:50005004-50005023 | Msa0735010:CDS | 40.0% | |
| TCATTATTCGCATCAAGCGA+TGG | - | chr5_1:50005179-50005198 | None:intergenic | 40.0% | |
| AAGTAGAGAATTGATGCCAC+GGG | - | chr5_1:50005353-50005372 | None:intergenic | 40.0% | |
| CAAGTAGAGAATTGATGCCA+CGG | - | chr5_1:50005354-50005373 | None:intergenic | 40.0% | |
| ! | CAACATTTGAAACGACACAC+GGG | + | chr5_1:50005394-50005413 | Msa0735010:CDS | 40.0% |
| !! | AAGTGTAGGGGAGTATTCAA+TGG | + | chr5_1:50005519-50005538 | Msa0735010:CDS | 40.0% |
| !! | TAGGGGAGTATTCAATGGAT+TGG | + | chr5_1:50005524-50005543 | Msa0735010:CDS | 40.0% |
| ! | TTGGAGTCATTGGTTGATGT+TGG | + | chr5_1:50005543-50005562 | Msa0735010:CDS | 40.0% |
| TTCAACAAAATGGCGTCTGT+TGG | - | chr5_1:50005717-50005736 | None:intergenic | 40.0% | |
| !! | AACAGACGCCATTTTGTTGA+AGG | + | chr5_1:50005716-50005735 | Msa0735010:CDS | 40.0% |
| TGCAGTGGATATTGCATGAT+TGG | + | chr5_1:50005839-50005858 | Msa0735010:intron | 40.0% | |
| GAAGGTGATTGTGATAGACA+TGG | + | chr5_1:50005930-50005949 | Msa0735010:CDS | 40.0% | |
| GATTGTGATAGACATGGTGT+TGG | + | chr5_1:50005936-50005955 | Msa0735010:CDS | 40.0% | |
| ! | ATGGTGTTGGAAAGTGAGAA+GGG | + | chr5_1:50005949-50005968 | Msa0735010:CDS | 40.0% |
| !! | TTGATGATGGTAGTACTCAC+AGG | + | chr5_1:50006015-50006034 | Msa0735010:CDS | 40.0% |
| !! | ATCCAGTTTTGACAAACCCG+TGG | + | chr5_1:50005334-50005353 | Msa0735010:CDS | 45.0% |
| CGTGGCATCAATTCTCTACT+TGG | + | chr5_1:50005352-50005371 | Msa0735010:CDS | 45.0% | |
| GACACACGGGATGTTGATAT+GGG | + | chr5_1:50005407-50005426 | Msa0735010:CDS | 45.0% | |
| TAATCGAGCATCACTTGCCA+TGG | - | chr5_1:50005478-50005497 | None:intergenic | 45.0% | |
| ! | GAGTCATTGGTTGATGTTGG+AGG | + | chr5_1:50005546-50005565 | Msa0735010:CDS | 45.0% |
| ! | TCATTGGTTGATGTTGGAGG+AGG | + | chr5_1:50005549-50005568 | Msa0735010:CDS | 45.0% |
| AGACACTGCACTCCATTTGT+GGG | - | chr5_1:50005611-50005630 | None:intergenic | 45.0% | |
| AAGACACTGCACTCCATTTG+TGG | - | chr5_1:50005612-50005631 | None:intergenic | 45.0% | |
| AACAAAATGGCGTCTGTTGG+AGG | - | chr5_1:50005714-50005733 | None:intergenic | 45.0% | |
| ! | CATGGTGTTGGAAAGTGAGA+AGG | + | chr5_1:50005948-50005967 | Msa0735010:CDS | 45.0% |
| !! | ATCCAGTTTTGACAAACCCG+TGG | + | chr5_1:50005334-50005353 | Msa0735010:CDS | 45.0% |
| CGTGGCATCAATTCTCTACT+TGG | + | chr5_1:50005352-50005371 | Msa0735010:CDS | 45.0% | |
| GACACACGGGATGTTGATAT+GGG | + | chr5_1:50005407-50005426 | Msa0735010:CDS | 45.0% | |
| TAATCGAGCATCACTTGCCA+TGG | - | chr5_1:50005478-50005497 | None:intergenic | 45.0% | |
| ! | GAGTCATTGGTTGATGTTGG+AGG | + | chr5_1:50005546-50005565 | Msa0735010:CDS | 45.0% |
| ! | TCATTGGTTGATGTTGGAGG+AGG | + | chr5_1:50005549-50005568 | Msa0735010:CDS | 45.0% |
| AGACACTGCACTCCATTTGT+GGG | - | chr5_1:50005611-50005630 | None:intergenic | 45.0% | |
| AAGACACTGCACTCCATTTG+TGG | - | chr5_1:50005612-50005631 | None:intergenic | 45.0% | |
| AACAAAATGGCGTCTGTTGG+AGG | - | chr5_1:50005714-50005733 | None:intergenic | 45.0% | |
| ! | CATGGTGTTGGAAAGTGAGA+AGG | + | chr5_1:50005948-50005967 | Msa0735010:CDS | 45.0% |
| TGCCACGGGTTTGTCAAAAC+TGG | - | chr5_1:50005339-50005358 | None:intergenic | 50.0% | |
| CGACACACGGGATGTTGATA+TGG | + | chr5_1:50005406-50005425 | Msa0735010:CDS | 50.0% | |
| ! | TTGATGTTGGAGGAGGCACA+GGG | + | chr5_1:50005556-50005575 | Msa0735010:CDS | 50.0% |
| TTTAGCAAGGGCCTTTGCCA+TGG | - | chr5_1:50005583-50005602 | None:intergenic | 50.0% | |
| GATCTCCCACATGTTGTCGA+TGG | + | chr5_1:50005633-50005652 | Msa0735010:CDS | 50.0% | |
| GCAAGCCATCGACAACATGT+GGG | - | chr5_1:50005641-50005660 | None:intergenic | 50.0% | |
| TGCAAGCCATCGACAACATG+TGG | - | chr5_1:50005642-50005661 | None:intergenic | 50.0% | |
| ! | CATGTTGTCGATGGCTTGCA+AGG | + | chr5_1:50005642-50005661 | Msa0735010:CDS | 50.0% |
| TGCCACGGGTTTGTCAAAAC+TGG | - | chr5_1:50005339-50005358 | None:intergenic | 50.0% | |
| CGACACACGGGATGTTGATA+TGG | + | chr5_1:50005406-50005425 | Msa0735010:CDS | 50.0% | |
| ! | TTGATGTTGGAGGAGGCACA+GGG | + | chr5_1:50005556-50005575 | Msa0735010:CDS | 50.0% |
| TTTAGCAAGGGCCTTTGCCA+TGG | - | chr5_1:50005583-50005602 | None:intergenic | 50.0% | |
| GATCTCCCACATGTTGTCGA+TGG | + | chr5_1:50005633-50005652 | Msa0735010:CDS | 50.0% | |
| GCAAGCCATCGACAACATGT+GGG | - | chr5_1:50005641-50005660 | None:intergenic | 50.0% | |
| TGCAAGCCATCGACAACATG+TGG | - | chr5_1:50005642-50005661 | None:intergenic | 50.0% | |
| ! | CATGTTGTCGATGGCTTGCA+AGG | + | chr5_1:50005642-50005661 | Msa0735010:CDS | 50.0% |
| ACGAATGGCGTCACGCTCAT+TGG | - | chr5_1:50005300-50005319 | None:intergenic | 55.0% | |
| ! | TCGAGCATCGCATGCACGAA+TGG | - | chr5_1:50005315-50005334 | None:intergenic | 55.0% |
| ! | GTTGATGTTGGAGGAGGCAC+AGG | + | chr5_1:50005555-50005574 | Msa0735010:CDS | 55.0% |
| ACGAATGGCGTCACGCTCAT+TGG | - | chr5_1:50005300-50005319 | None:intergenic | 55.0% | |
| ! | TCGAGCATCGCATGCACGAA+TGG | - | chr5_1:50005315-50005334 | None:intergenic | 55.0% |
| ! | GTTGATGTTGGAGGAGGCAC+AGG | + | chr5_1:50005555-50005574 | Msa0735010:CDS | 55.0% |
| AGGCACAGGGACCATGGCAA+AGG | + | chr5_1:50005569-50005588 | Msa0735010:CDS | 60.0% | |
| AGGCACAGGGACCATGGCAA+AGG | + | chr5_1:50005569-50005588 | Msa0735010:CDS | 60.0% | |
| ! | TGGAGGAGGCACAGGGACCA+TGG | + | chr5_1:50005563-50005582 | Msa0735010:CDS | 65.0% |
| ! | TGGAGGAGGCACAGGGACCA+TGG | + | chr5_1:50005563-50005582 | Msa0735010:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 50004961 | 50006149 | 50004961 | ID=Msa0735010;Name=Msa0735010 |
| chr5_1 | mRNA | 50004961 | 50006149 | 50004961 | ID=Msa0735010-mRNA-1;Parent=Msa0735010;Name=Msa0735010-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|360 |
| chr5_1 | exon | 50004961 | 50005737 | 50004961 | ID=Msa0735010-mRNA-1:exon:14115;Parent=Msa0735010-mRNA-1 |
| chr5_1 | exon | 50005844 | 50006149 | 50005844 | ID=Msa0735010-mRNA-1:exon:14116;Parent=Msa0735010-mRNA-1 |
| chr5_1 | CDS | 50004961 | 50005737 | 50004961 | ID=Msa0735010-mRNA-1:cds;Parent=Msa0735010-mRNA-1 |
| chr5_1 | CDS | 50005844 | 50006149 | 50005844 | ID=Msa0735010-mRNA-1:cds;Parent=Msa0735010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
