Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056250 | XP_039683468.1 | 97.487 | 398 | 10 | 0 | 1 | 398 | 1 | 398 | 0.0 | 800 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056250 | sp|Q66I84|DCC1_DANRE | 32.240 | 366 | 228 | 8 | 26 | 385 | 24 | 375 | 2.58e-39 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056250 | A0A072TGP8 | 97.487 | 398 | 10 | 0 | 1 | 398 | 1 | 398 | 0.0 | 800 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1056250 | 0.802064 | 6.698872e-49 | -8.615850e-47 |
| Msa1056250 | Msa1100050 | 0.808068 | 3.713296e-50 | -8.615850e-47 |
| Msa1056250 | Msa1110110 | 0.911239 | 7.619098e-83 | -8.615850e-47 |
| Msa0359030 | Msa1056250 | 0.827212 | 1.772131e-54 | -8.615850e-47 |
| Msa0569200 | Msa1056250 | 0.815297 | 9.938527e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056250 | MtrunA17_Chr7g0227931 | 97.487 | 398 | 10 | 0 | 1 | 398 | 1 | 398 | 0.0 | 800 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056250 | AT2G44580.2 | 55.949 | 395 | 155 | 4 | 10 | 398 | 5 | 386 | 1.50e-158 | 451 |
| Msa1056250 | AT2G44580.1 | 55.949 | 395 | 155 | 4 | 10 | 398 | 5 | 386 | 1.50e-158 | 451 |
Find 110 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTCTCTTACCTCCTTTC+AGG | 0.140263 | 7_2:+33236701 | None:intergenic |
| GCTAAGCTTGACTTAAATTT+TGG | 0.146507 | 7_2:+33236096 | None:intergenic |
| AGTTCGGCTGTGTGTGTTTC+CGG | 0.163504 | 7_2:+33240553 | None:intergenic |
| GTTGCATATCACCCTGATTT+TGG | 0.178187 | 7_2:-33239455 | Msa1056250:CDS |
| AGCCGAGCGCGGCTACATTT+TGG | 0.193410 | 7_2:+33240630 | None:intergenic |
| AAAACCTGGAGTTTGGTTTC+TGG | 0.213047 | 7_2:+33240506 | None:intergenic |
| TACTATCTTGCACTGAAAAT+TGG | 0.229137 | 7_2:+33236286 | None:intergenic |
| CCTGAAGTCTGCTGTGGTTC+TGG | 0.271122 | 7_2:+33239524 | None:intergenic |
| CAATTTAAGTTTATCAAGTC+TGG | 0.284052 | 7_2:+33237158 | None:intergenic |
| TACGATTCTGATTGATTTGC+TGG | 0.300346 | 7_2:+33237282 | None:intergenic |
| TACCTTTCATTCAAAACATC+TGG | 0.312568 | 7_2:+33239386 | None:intergenic |
| TGAAAACAGGGGAAATAAAA+AGG | 0.316519 | 7_2:+33236149 | None:intergenic |
| GGAGTTAAGGGTTGGATTGC+AGG | 0.317393 | 7_2:-33237010 | Msa1056250:CDS |
| CTAGATCAGGATTATATAAC+TGG | 0.322642 | 7_2:-33237068 | Msa1056250:CDS |
| TACATCCTTCACAGTCCTTA+TGG | 0.322849 | 7_2:-33236233 | Msa1056250:three_prime_UTR |
| ATAATATCTGAACCTGATAT+AGG | 0.331471 | 7_2:+33236468 | None:intergenic |
| GAGTTACATGGACATGATTC+TGG | 0.333299 | 7_2:-33236941 | Msa1056250:CDS |
| GTTCGGCTGTGTGTGTTTCC+GGG | 0.337965 | 7_2:+33240554 | None:intergenic |
| AAAAGAGAAAACCTGGAGTT+TGG | 0.341569 | 7_2:+33240499 | None:intergenic |
| TCATCATGAGGTCCAAAATC+AGG | 0.344472 | 7_2:+33239443 | None:intergenic |
| TCTAGAGCTGGATGAGAAAT+TGG | 0.347964 | 7_2:-33239411 | Msa1056250:CDS |
| AAAAGTTGTACCTGGTAGTA+TGG | 0.354433 | 7_2:-33237199 | Msa1056250:CDS |
| CTTCCAACGACGGTCAAGTT+CGG | 0.362960 | 7_2:+33240537 | None:intergenic |
| ACATATGCTATGAAGTTTGT+TGG | 0.371449 | 7_2:-33237333 | Msa1056250:CDS |
| TTACATATCTAAATGAAAAC+AGG | 0.374312 | 7_2:+33236136 | None:intergenic |
| AGCTAGTGACGAGGAGTTAA+GGG | 0.384193 | 7_2:-33237022 | Msa1056250:CDS |
| GAGGTATTGACAGAGAAAAT+TGG | 0.391418 | 7_2:-33236604 | Msa1056250:CDS |
| CCAGAACCACAGCAGACTTC+AGG | 0.399798 | 7_2:-33239524 | Msa1056250:CDS |
| AAGATCTACAGCCCTATATC+AGG | 0.405081 | 7_2:-33236480 | Msa1056250:intron |
| AAGCTAGTGACGAGGAGTTA+AGG | 0.405465 | 7_2:-33237023 | Msa1056250:CDS |
| TATTTCAGGATGGTCTTAAG+AGG | 0.410120 | 7_2:-33237396 | Msa1056250:intron |
| TTTCAGAGAGCGTGCGAAAT+GGG | 0.422061 | 7_2:-33236509 | Msa1056250:CDS |
| TGTTTAGTGAAAGGGTGAAA+TGG | 0.428421 | 7_2:-33239549 | Msa1056250:intron |
| CTGTGGAGATCAATGGATAT+TGG | 0.428629 | 7_2:-33236978 | Msa1056250:CDS |
| TAATATCTGAACCTGATATA+GGG | 0.441929 | 7_2:+33236469 | None:intergenic |
| TCTTTACTTATTTGAAATTG+TGG | 0.455431 | 7_2:-33236038 | None:intergenic |
| TGGTACAAGCAAAACAGAAT+TGG | 0.457146 | 7_2:+33237305 | None:intergenic |
| AAAGTGGGATGCATTTCATC+TGG | 0.459477 | 7_2:+33236643 | None:intergenic |
| CCGGGCAGTTGAGATCAATT+CGG | 0.463112 | 7_2:+33240572 | None:intergenic |
| CGCACGCTCTCTGAAAAGAA+TGG | 0.463696 | 7_2:+33236516 | None:intergenic |
| CAAAGAACTGCATCTTCGTC+AGG | 0.467011 | 7_2:+33237369 | None:intergenic |
| CTTTCAGCTGTGGAGATCAA+TGG | 0.471420 | 7_2:-33236985 | Msa1056250:CDS |
| CAATGCCTTGCAAGTACCTT+CGG | 0.476106 | 7_2:+33236826 | None:intergenic |
| TGGTAGTATGGAGCTTATTG+AGG | 0.485548 | 7_2:-33237187 | Msa1056250:CDS |
| AGAATGGAGAAGCGTTCAGC+TGG | 0.490161 | 7_2:+33236532 | None:intergenic |
| AATTTAAGTTTATCAAGTCT+GGG | 0.490225 | 7_2:+33237159 | None:intergenic |
| ATGCTTTATGTTTAGTGAAA+GGG | 0.490804 | 7_2:-33239557 | Msa1056250:intron |
| AAAATTCAGTGTTGAATGAC+TGG | 0.512521 | 7_2:-33236906 | Msa1056250:CDS |
| AGAAAATTGGAGTTGAGACA+TGG | 0.514429 | 7_2:-33236591 | Msa1056250:CDS |
| GAGAATCACGAATCTAGATC+AGG | 0.514548 | 7_2:-33237081 | Msa1056250:CDS |
| ACCTTCCATAAGATCAAAAG+TGG | 0.518379 | 7_2:+33236627 | None:intergenic |
| ATTGCAGGCTCTTTCAGCTG+TGG | 0.518858 | 7_2:-33236995 | Msa1056250:CDS |
| CCTCGTCACTTTAAATAGAC+CGG | 0.521248 | 7_2:-33236206 | Msa1056250:three_prime_UTR |
| AAGTGACGAGGAAGGCCATA+AGG | 0.523283 | 7_2:+33236218 | None:intergenic |
| GCAAAGTGGTGTGTGGAAGT+TGG | 0.529433 | 7_2:-33236761 | Msa1056250:CDS |
| ACCCAAAATGTAGCCGCGCT+CGG | 0.529875 | 7_2:-33240632 | Msa1056250:five_prime_UTR |
| GTACCAGGTCTTTCTGCAGA+AGG | 0.532732 | 7_2:-33236358 | Msa1056250:CDS |
| GTGGAAGTTGGATGAGAAGC+GGG | 0.536854 | 7_2:-33236749 | Msa1056250:CDS |
| AAGCGTTCAGCTGGAGTGGA+AGG | 0.542810 | 7_2:+33236541 | None:intergenic |
| GGAGAAGCGTTCAGCTGGAG+TGG | 0.543503 | 7_2:+33236537 | None:intergenic |
| TGATCTCATAATTCTAGAGC+TGG | 0.546425 | 7_2:-33239423 | Msa1056250:CDS |
| CCGAATTGATCTCAACTGCC+CGG | 0.546451 | 7_2:-33240572 | Msa1056250:five_prime_UTR |
| GCAACAGAAATCGATGATCC+AGG | 0.552834 | 7_2:+33239473 | None:intergenic |
| AGATGAAGTTGTGAATATGC+TGG | 0.555808 | 7_2:-33236863 | Msa1056250:CDS |
| CAGCCGAACTTGACCGTCGT+TGG | 0.557162 | 7_2:-33240540 | Msa1056250:five_prime_UTR |
| AGTGACGAGGAGTTAAGGGT+TGG | 0.559394 | 7_2:-33237018 | Msa1056250:CDS |
| GAGAGCGTGCGAAATGGGAA+TGG | 0.559837 | 7_2:-33236504 | Msa1056250:CDS |
| CAGATTTGATGAGAATGACA+TGG | 0.560594 | 7_2:-33237115 | Msa1056250:CDS |
| ACCTGGAGTTTGGTTTCTGG+CGG | 0.560844 | 7_2:+33240509 | None:intergenic |
| ACCTTTCATTCAAAACATCT+GGG | 0.562619 | 7_2:+33239387 | None:intergenic |
| CATCATGAGGTCCAAAATCA+GGG | 0.563023 | 7_2:+33239444 | None:intergenic |
| TTCAGGGATCTGGATGTACC+AGG | 0.570204 | 7_2:-33236373 | Msa1056250:intron |
| GTTAGTTGATGAGAGTTACA+TGG | 0.573991 | 7_2:-33236953 | Msa1056250:CDS |
| GCCGCCAGAAACCAAACTCC+AGG | 0.580094 | 7_2:-33240510 | Msa1056250:intron |
| CAAATAAGTAAAGAAATACA+AGG | 0.587110 | 7_2:+33236047 | None:intergenic |
| AAATGATCATTCTAGAGTGA+TGG | 0.588477 | 7_2:-33236071 | Msa1056250:three_prime_UTR |
| TGGAGATCAATGGATATTGG+AGG | 0.591313 | 7_2:-33236975 | Msa1056250:CDS |
| ATTTAAGTTTATCAAGTCTG+GGG | 0.591494 | 7_2:+33237160 | None:intergenic |
| GATTTCCGAAGGTACTTGCA+AGG | 0.595602 | 7_2:-33236831 | Msa1056250:CDS |
| TTTAAGTTTATCAAGTCTGG+GGG | 0.597237 | 7_2:+33237161 | None:intergenic |
| CCGGTCTATTTAAAGTGACG+AGG | 0.599382 | 7_2:+33236206 | None:intergenic |
| GGCGGCGTTTCTTCCAACGA+CGG | 0.600195 | 7_2:+33240527 | None:intergenic |
| ACAAAGGGCAAAGCCGAGCG+CGG | 0.608367 | 7_2:+33240619 | None:intergenic |
| ATTGGATCATCATTAGCTGA+CGG | 0.612043 | 7_2:+33236304 | None:intergenic |
| GTGAATATGCTGGAATCAGA+TGG | 0.612073 | 7_2:-33236853 | Msa1056250:CDS |
| ACACTTAGACATATGTCACC+TGG | 0.612546 | 7_2:-33239491 | Msa1056250:CDS |
| TACATATCTAAATGAAAACA+GGG | 0.613646 | 7_2:+33236137 | None:intergenic |
| TCTATTTAAAGTGACGAGGA+AGG | 0.614866 | 7_2:+33236210 | None:intergenic |
| AAACCTTCTGCAGAAAGACC+TGG | 0.615596 | 7_2:+33236355 | None:intergenic |
| GCTCCTCCTGAAGTCTGCTG+TGG | 0.628242 | 7_2:+33239518 | None:intergenic |
| GAAGGCCATAAGGACTGTGA+AGG | 0.628804 | 7_2:+33236228 | None:intergenic |
| GAAAATTGGAGTTGAGACAT+GGG | 0.629514 | 7_2:-33236590 | Msa1056250:CDS |
| GGAATCAGATGGATTTCCGA+AGG | 0.635324 | 7_2:-33236842 | Msa1056250:CDS |
| TCAATAAGCTCCATACTACC+AGG | 0.636229 | 7_2:+33237189 | None:intergenic |
| TATGCTAGAGAAATCCTGAA+AGG | 0.639851 | 7_2:-33236715 | Msa1056250:CDS |
| AGTGTACTAAAAGTTGTACC+TGG | 0.641842 | 7_2:-33237207 | Msa1056250:CDS |
| GCTAGAGAAATCCTGAAAGG+AGG | 0.643390 | 7_2:-33236712 | Msa1056250:CDS |
| TGTGGAAGTTGGATGAGAAG+CGG | 0.646023 | 7_2:-33236750 | Msa1056250:CDS |
| GAACCACAGCAGACTTCAGG+AGG | 0.646781 | 7_2:-33239521 | Msa1056250:CDS |
| GATTCTGATTGATTTGCTGG+TGG | 0.656551 | 7_2:+33237285 | None:intergenic |
| ACAGCAGACTTCAGGAGGAG+CGG | 0.657032 | 7_2:-33239516 | Msa1056250:CDS |
| ATTGCATGCAAAGTGGTGTG+TGG | 0.666073 | 7_2:-33236768 | Msa1056250:CDS |
| CCTTCCATAAGATCAAAAGT+GGG | 0.666519 | 7_2:+33236628 | None:intergenic |
| TGGAAGGCAATGAAGAGACA+CGG | 0.669323 | 7_2:+33236557 | None:intergenic |
| GAAAATGATTGCATGCAAAG+TGG | 0.671448 | 7_2:-33236775 | Msa1056250:CDS |
| AGGCAATGAAGAGACACGGA+AGG | 0.679043 | 7_2:+33236561 | None:intergenic |
| TTGCTTGCATGTGTATGCCA+AGG | 0.692578 | 7_2:-33236806 | Msa1056250:CDS |
| AGAATTATGAGATCATCATG+AGG | 0.708784 | 7_2:+33239431 | None:intergenic |
| ACATATCTAAATGAAAACAG+GGG | 0.711112 | 7_2:+33236138 | None:intergenic |
| AAATATTCAAGCTAGTGACG+AGG | 0.720450 | 7_2:-33237031 | Msa1056250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGCAAATTTTTTTTTCAA+CGG | - | chr7_2:33236953-33236972 | Msa1056250:CDS | 15.0% |
| !! | TCAAAAAAACAATATAAAGA+TGG | + | chr7_2:33237479-33237498 | None:intergenic | 15.0% |
| !! | AATAATATGACCATAATATT+AGG | - | chr7_2:33239133-33239152 | Msa1056250:intron | 15.0% |
| !!! | GTTTGTTTTTGATAAACAAA+GGG | + | chr7_2:33236075-33236094 | None:intergenic | 20.0% |
| !!! | TGTTTGTTTTTGATAAACAA+AGG | + | chr7_2:33236076-33236095 | None:intergenic | 20.0% |
| !!! | GTTTATTTTATCTTTTGCTA+TGG | - | chr7_2:33236455-33236474 | Msa1056250:intron | 20.0% |
| !!! | ATTAAGAATTTTATCCAAAC+AGG | - | chr7_2:33236758-33236777 | Msa1056250:CDS | 20.0% |
| !!! | ATGAGTTTTTGACTTATTTA+AGG | - | chr7_2:33237522-33237541 | Msa1056250:intron | 20.0% |
| !! | AAAATCCATCTCAATTTATT+TGG | - | chr7_2:33237656-33237675 | Msa1056250:intron | 20.0% |
| !!! | TTTGGGTACTATAATTTTAT+TGG | + | chr7_2:33237822-33237841 | None:intergenic | 20.0% |
| !! | AAAATTATAGTACCCAAAAA+TGG | - | chr7_2:33237824-33237843 | Msa1056250:intron | 20.0% |
| !! | AATAGCATTATGATTTCTTA+TGG | + | chr7_2:33238209-33238228 | None:intergenic | 20.0% |
| !! | TAACTGAAATCCTAATATTA+TGG | + | chr7_2:33239146-33239165 | None:intergenic | 20.0% |
| !! | TCTAAGTAACTATTGTAATT+AGG | + | chr7_2:33239170-33239189 | None:intergenic | 20.0% |
| !!! | AATTTAAGTTTATCAAGTCT+GGG | + | chr7_2:33239520-33239539 | None:intergenic | 20.0% |
| !!! | TTTCTAATTTTGAATGTTTC+AGG | - | chr7_2:33240286-33240305 | Msa1056250:intron | 20.0% |
| !!! | TTCTAATTTTGAATGTTTCA+GGG | - | chr7_2:33240287-33240306 | Msa1056250:intron | 20.0% |
| !! | TACATATCTAAATGAAAACA+GGG | + | chr7_2:33240542-33240561 | None:intergenic | 20.0% |
| !! | TTACATATCTAAATGAAAAC+AGG | + | chr7_2:33240543-33240562 | None:intergenic | 20.0% |
| !! | CAAATAAGTAAAGAAATACA+AGG | + | chr7_2:33240632-33240651 | None:intergenic | 20.0% |
| ! | CAGTAAATAAGTTCAACTAT+GGG | + | chr7_2:33236552-33236571 | None:intergenic | 25.0% |
| ! | TCAGTAAATAAGTTCAACTA+TGG | + | chr7_2:33236553-33236572 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr7_2:33236859-33236878 | None:intergenic | 25.0% |
| !!! | GTTCAAAATTTTAGCTTTGT+CGG | - | chr7_2:33236890-33236909 | Msa1056250:CDS | 25.0% |
| ! | AAAATTTGCATTATGAAGCA+CGG | + | chr7_2:33236945-33236964 | None:intergenic | 25.0% |
| ! | AATGCTTTATGTTTAGTGAA+AGG | - | chr7_2:33237118-33237137 | Msa1056250:CDS | 25.0% |
| ! | ATGCTTTATGTTTAGTGAAA+GGG | - | chr7_2:33237119-33237138 | Msa1056250:CDS | 25.0% |
| !! | TTATGTTATTTGTAACTCCT+TGG | - | chr7_2:33237327-33237346 | Msa1056250:CDS | 25.0% |
| ! | TTGCTTTAATTACCGTAATT+AGG | - | chr7_2:33237434-33237453 | Msa1056250:intron | 25.0% |
| !!! | ATTTGATTTTATGAAGCTAG+TGG | - | chr7_2:33237587-33237606 | Msa1056250:intron | 25.0% |
| ! | AACAACCAAATAAATTGAGA+TGG | + | chr7_2:33237664-33237683 | None:intergenic | 25.0% |
| !!! | GCTTTTTGGATATTTTAAAG+TGG | + | chr7_2:33237880-33237899 | None:intergenic | 25.0% |
| !! | GAGACATTTTTATATCGAAA+AGG | + | chr7_2:33238086-33238105 | None:intergenic | 25.0% |
| ! | AGAAATCATAATGCTATTCT+TGG | - | chr7_2:33238211-33238230 | Msa1056250:intron | 25.0% |
| !!! | CATATTTTAACAGAAGATCT+TGG | + | chr7_2:33238274-33238293 | None:intergenic | 25.0% |
| !! | AGTATTGTGATTCAGTATTT+TGG | + | chr7_2:33238434-33238453 | None:intergenic | 25.0% |
| !! | AACTTTTCAATATAACCTAG+GGG | + | chr7_2:33238536-33238555 | None:intergenic | 25.0% |
| !! | CAACTTTTCAATATAACCTA+GGG | + | chr7_2:33238537-33238556 | None:intergenic | 25.0% |
| ! | ACATGAAAATGTGTAGAAAA+GGG | + | chr7_2:33238572-33238591 | None:intergenic | 25.0% |
| !!! | CGTAATTTTAATTTGACTCT+TGG | - | chr7_2:33238761-33238780 | Msa1056250:intron | 25.0% |
| ! | GAACACATAAATAGTAAGAA+AGG | + | chr7_2:33239030-33239049 | None:intergenic | 25.0% |
| !! | ATTTAAGTTTATCAAGTCTG+GGG | + | chr7_2:33239519-33239538 | None:intergenic | 25.0% |
| !! | CAATTTAAGTTTATCAAGTC+TGG | + | chr7_2:33239521-33239540 | None:intergenic | 25.0% |
| !! | ATCATTTTCTTTTACTTCCT+TGG | + | chr7_2:33239890-33239909 | None:intergenic | 25.0% |
| !! | GAGAAAGTTAGAGAATTTTA+TGG | - | chr7_2:33239990-33240009 | Msa1056250:intron | 25.0% |
| !! | TAGAGAATTTTATGGAAGAA+TGG | - | chr7_2:33239998-33240017 | Msa1056250:intron | 25.0% |
| ! | TAATATCTGAACCTGATATA+GGG | + | chr7_2:33240210-33240229 | None:intergenic | 25.0% |
| ! | ATAATATCTGAACCTGATAT+AGG | + | chr7_2:33240211-33240230 | None:intergenic | 25.0% |
| ! | GTACTCGCTTATAAAAATTT+AGG | - | chr7_2:33240500-33240519 | Msa1056250:intron | 25.0% |
| ! | ACATATCTAAATGAAAACAG+GGG | + | chr7_2:33240541-33240560 | None:intergenic | 25.0% |
| GATTAGAAAAAGAGAAAACC+TGG | + | chr7_2:33236187-33236206 | None:intergenic | 30.0% | |
| ! | CATAAGTTAGTTCTCCATAA+CGG | + | chr7_2:33236343-33236362 | None:intergenic | 30.0% |
| TTTATCCAAACAGGACAAAA+CGG | - | chr7_2:33236767-33236786 | Msa1056250:CDS | 30.0% | |
| ! | GGCAAATGTTAGTAATTTGT+TGG | - | chr7_2:33236974-33236993 | Msa1056250:CDS | 30.0% |
| ! | TTATGTTTTTCTCCTTTGTC+CGG | - | chr7_2:33236999-33237018 | Msa1056250:CDS | 30.0% |
| TAGCAATATGCATAGTCTAT+GGG | - | chr7_2:33237071-33237090 | Msa1056250:CDS | 30.0% | |
| AGAATTATGAGATCATCATG+AGG | + | chr7_2:33237248-33237267 | None:intergenic | 30.0% | |
| ACCTTTCATTCAAAACATCT+GGG | + | chr7_2:33237292-33237311 | None:intergenic | 30.0% | |
| TACCTTTCATTCAAAACATC+TGG | + | chr7_2:33237293-33237312 | None:intergenic | 30.0% | |
| ATTTGTAACTCCTTGGAAAA+AGG | - | chr7_2:33237334-33237353 | Msa1056250:CDS | 30.0% | |
| CTTTAATTACCGTAATTAGG+TGG | - | chr7_2:33237437-33237456 | Msa1056250:intron | 30.0% | |
| CTTATTTAAGGAACTCTCAA+TGG | - | chr7_2:33237534-33237553 | Msa1056250:intron | 30.0% | |
| ! | ATGGATTTTCATTTCATCAG+AGG | + | chr7_2:33237645-33237664 | None:intergenic | 30.0% |
| TGAATTAAACCATTGAGGTT+TGG | + | chr7_2:33237699-33237718 | None:intergenic | 30.0% | |
| ATTGCTGAATTAAACCATTG+AGG | + | chr7_2:33237704-33237723 | None:intergenic | 30.0% | |
| ! | AATAGTCATACACAGCTTTT+TGG | + | chr7_2:33237894-33237913 | None:intergenic | 30.0% |
| ! | ATACACCAAAACCTTTTCAT+AGG | - | chr7_2:33237920-33237939 | Msa1056250:intron | 30.0% |
| CTCAAGGATAGTTATGAAAT+TGG | - | chr7_2:33237992-33238011 | Msa1056250:intron | 30.0% | |
| !! | AGTTTTTCAACAAGTCTTCT+AGG | - | chr7_2:33238060-33238079 | Msa1056250:intron | 30.0% |
| ! | GTTGTTACTTAGGATAAAAG+TGG | + | chr7_2:33238243-33238262 | None:intergenic | 30.0% |
| !! | GGTAGAATTTGTTGTTACTT+AGG | + | chr7_2:33238253-33238272 | None:intergenic | 30.0% |
| ! | TGATACTTTGTTTGAGAGAT+TGG | - | chr7_2:33238304-33238323 | Msa1056250:intron | 30.0% |
| ! | CCAACTTTTCAATATAACCT+AGG | + | chr7_2:33238538-33238557 | None:intergenic | 30.0% |
| CCTAGGTTATATTGAAAAGT+TGG | - | chr7_2:33238535-33238554 | Msa1056250:intron | 30.0% | |
| GACATGAAAATGTGTAGAAA+AGG | + | chr7_2:33238573-33238592 | None:intergenic | 30.0% | |
| ! | CACATTTTCATGTCTTTTCT+TGG | - | chr7_2:33238579-33238598 | Msa1056250:intron | 30.0% |
| ATTCTTCACTTAGCTTATCA+TGG | - | chr7_2:33238874-33238893 | Msa1056250:intron | 30.0% | |
| GGATTTCAAACATTGAAAAG+AGG | + | chr7_2:33238922-33238941 | None:intergenic | 30.0% | |
| AGAAATGTAGAACACAGAAA+TGG | + | chr7_2:33238990-33239009 | None:intergenic | 30.0% | |
| ATAAGTAAGGAAAGAGAGAA+AGG | + | chr7_2:33239243-33239262 | None:intergenic | 30.0% | |
| CTTTCCTTACTTATGTTACA+TGG | - | chr7_2:33239249-33239268 | Msa1056250:intron | 30.0% | |
| GAAACCATGTAACATAAGTA+AGG | + | chr7_2:33239256-33239275 | None:intergenic | 30.0% | |
| ACATGGTTTCTTTCTATTTC+AGG | - | chr7_2:33239266-33239285 | Msa1056250:intron | 30.0% | |
| ACATATGCTATGAAGTTTGT+TGG | - | chr7_2:33239343-33239362 | Msa1056250:intron | 30.0% | |
| ! | TTTAAGTTTATCAAGTCTGG+GGG | + | chr7_2:33239518-33239537 | None:intergenic | 30.0% |
| CTAGATCAGGATTATATAAC+TGG | - | chr7_2:33239608-33239627 | Msa1056250:intron | 30.0% | |
| ! | AAAATTCAGTGTTGAATGAC+TGG | - | chr7_2:33239770-33239789 | Msa1056250:intron | 30.0% |
| ! | AGAATTTTATGGAAGAATGG+AGG | - | chr7_2:33240001-33240020 | Msa1056250:intron | 30.0% |
| TACTATCTTGCACTGAAAAT+TGG | + | chr7_2:33240393-33240412 | None:intergenic | 30.0% | |
| TGAAAACAGGGGAAATAAAA+AGG | + | chr7_2:33240530-33240549 | None:intergenic | 30.0% | |
| ! | GCTAAGCTTGACTTAAATTT+TGG | + | chr7_2:33240583-33240602 | None:intergenic | 30.0% |
| !! | AAATGATCATTCTAGAGTGA+TGG | - | chr7_2:33240605-33240624 | Msa1056250:five_prime_UTR | 30.0% |
| AAAAGAGAAAACCTGGAGTT+TGG | + | chr7_2:33236180-33236199 | None:intergenic | 35.0% | |
| GATACATAGAGGATAAAGGA+AGG | + | chr7_2:33236212-33236231 | None:intergenic | 35.0% | |
| ATGCGATACATAGAGGATAA+AGG | + | chr7_2:33236216-33236235 | None:intergenic | 35.0% | |
| TCAACTATCTTGAGAGCTTA+TGG | + | chr7_2:33236653-33236672 | None:intergenic | 35.0% | |
| ! | TATGTTTTTCTCCTTTGTCC+GGG | - | chr7_2:33237000-33237019 | Msa1056250:CDS | 35.0% |
| CTAGAAGTCGATGAAAAGAA+GGG | + | chr7_2:33237054-33237073 | None:intergenic | 35.0% | |
| CTAGCAATATGCATAGTCTA+TGG | - | chr7_2:33237070-33237089 | Msa1056250:CDS | 35.0% | |
| TGTTTAGTGAAAGGGTGAAA+TGG | - | chr7_2:33237127-33237146 | Msa1056250:CDS | 35.0% | |
| !! | TGATCTCATAATTCTAGAGC+TGG | - | chr7_2:33237253-33237272 | Msa1056250:CDS | 35.0% |
| !! | TCCCAGATGTTTTGAATGAA+AGG | - | chr7_2:33237288-33237307 | Msa1056250:CDS | 35.0% |
| CTTGGAAAAAGGAAGGAAAT+GGG | - | chr7_2:33237345-33237364 | Msa1056250:CDS | 35.0% | |
| ! | GAGTTTGTTCCACCTAATTA+CGG | + | chr7_2:33237449-33237468 | None:intergenic | 35.0% |
| ! | ACTCATATGCTCTAGCTTAA+GGG | + | chr7_2:33237508-33237527 | None:intergenic | 35.0% |
| ! | AACTCATATGCTCTAGCTTA+AGG | + | chr7_2:33237509-33237528 | None:intergenic | 35.0% |
| AATGGCTTAGTGAAGACATT+TGG | - | chr7_2:33237552-33237571 | Msa1056250:intron | 35.0% | |
| GAGCCATATAAGTTCATATG+TGG | - | chr7_2:33237729-33237748 | Msa1056250:intron | 35.0% | |
| CCACCACATATGAACTTATA+TGG | + | chr7_2:33237735-33237754 | None:intergenic | 35.0% | |
| CCATATAAGTTCATATGTGG+TGG | - | chr7_2:33237732-33237751 | Msa1056250:intron | 35.0% | |
| !!! | TGGATATTTTAAAGTGGCCT+GGG | + | chr7_2:33237874-33237893 | None:intergenic | 35.0% |
| !!! | TTGGATATTTTAAAGTGGCC+TGG | + | chr7_2:33237875-33237894 | None:intergenic | 35.0% |
| AATAAGGGAGACCTATGAAA+AGG | + | chr7_2:33237934-33237953 | None:intergenic | 35.0% | |
| TTGTCAAGATTCAATGAGTG+TGG | + | chr7_2:33238022-33238041 | None:intergenic | 35.0% | |
| AAATGTGTAGAAAAGGGACT+TGG | + | chr7_2:33238566-33238585 | None:intergenic | 35.0% | |
| GTTTAAACTATGTCTGACGA+GGG | + | chr7_2:33238742-33238761 | None:intergenic | 35.0% | |
| TAAGTGAAGAATCACCACAA+AGG | + | chr7_2:33238866-33238885 | None:intergenic | 35.0% | |
| CTTATCATGGTCTATGAGTT+TGG | - | chr7_2:33238887-33238906 | Msa1056250:intron | 35.0% | |
| AAACATTGAAAAGAGGAGAG+TGG | + | chr7_2:33238915-33238934 | None:intergenic | 35.0% | |
| !! | CACAGAAATGGATTAGAAAC+TGG | + | chr7_2:33238978-33238997 | None:intergenic | 35.0% |
| GGTTTCTTTCTATTTCAGGA+TGG | - | chr7_2:33239270-33239289 | Msa1056250:intron | 35.0% | |
| ! | TATTTCAGGATGGTCTTAAG+AGG | - | chr7_2:33239280-33239299 | Msa1056250:intron | 35.0% |
| TGGTACAAGCAAAACAGAAT+TGG | + | chr7_2:33239374-33239393 | None:intergenic | 35.0% | |
| !! | TACGATTCTGATTGATTTGC+TGG | + | chr7_2:33239397-33239416 | None:intergenic | 35.0% |
| AGTGTACTAAAAGTTGTACC+TGG | - | chr7_2:33239469-33239488 | Msa1056250:CDS | 35.0% | |
| AAAAGTTGTACCTGGTAGTA+TGG | - | chr7_2:33239477-33239496 | Msa1056250:CDS | 35.0% | |
| CAGATTTGATGAGAATGACA+TGG | - | chr7_2:33239561-33239580 | Msa1056250:intron | 35.0% | |
| AAATATTCAAGCTAGTGACG+AGG | - | chr7_2:33239645-33239664 | Msa1056250:intron | 35.0% | |
| !! | GTTAGTTGATGAGAGTTACA+TGG | - | chr7_2:33239723-33239742 | Msa1056250:intron | 35.0% |
| AGATGAAGTTGTGAATATGC+TGG | - | chr7_2:33239813-33239832 | Msa1056250:intron | 35.0% | |
| GAAAATGATTGCATGCAAAG+TGG | - | chr7_2:33239901-33239920 | Msa1056250:intron | 35.0% | |
| TATGCTAGAGAAATCCTGAA+AGG | - | chr7_2:33239961-33239980 | Msa1056250:intron | 35.0% | |
| CCTTCCATAAGATCAAAAGT+GGG | + | chr7_2:33240051-33240070 | None:intergenic | 35.0% | |
| ACCTTCCATAAGATCAAAAG+TGG | + | chr7_2:33240052-33240071 | None:intergenic | 35.0% | |
| ! | TTTTGATCTTATGGAAGGTG+AGG | - | chr7_2:33240053-33240072 | Msa1056250:intron | 35.0% |
| !! | GAGGTATTGACAGAGAAAAT+TGG | - | chr7_2:33240072-33240091 | Msa1056250:intron | 35.0% |
| AGAAAATTGGAGTTGAGACA+TGG | - | chr7_2:33240085-33240104 | Msa1056250:intron | 35.0% | |
| GAAAATTGGAGTTGAGACAT+GGG | - | chr7_2:33240086-33240105 | Msa1056250:intron | 35.0% | |
| ! | TTTTGAATGTTTCAGGGATC+TGG | - | chr7_2:33240293-33240312 | Msa1056250:intron | 35.0% |
| ATTGGATCATCATTAGCTGA+CGG | + | chr7_2:33240375-33240394 | None:intergenic | 35.0% | |
| ! | TCTATTTAAAGTGACGAGGA+AGG | + | chr7_2:33240469-33240488 | None:intergenic | 35.0% |
| ! | AAAACCTGGAGTTTGGTTTC+TGG | + | chr7_2:33236173-33236192 | None:intergenic | 40.0% |
| !! | ATAGCTTTAGTGCGCAATTG+CGG | + | chr7_2:33236295-33236314 | None:intergenic | 40.0% |
| CATTTCTTGTGAGACCGTTA+TGG | - | chr7_2:33236326-33236345 | Msa1056250:CDS | 40.0% | |
| TGACTGTTTGAGAGAGCTTA+TGG | - | chr7_2:33236585-33236604 | Msa1056250:CDS | 40.0% | |
| ! | TATCACCGTTTTGTCCTGTT+TGG | + | chr7_2:33236775-33236794 | None:intergenic | 40.0% |
| GATAAAGAGTTGAACGTCCT+GGG | + | chr7_2:33237032-33237051 | None:intergenic | 40.0% | |
| GCTAGAAGTCGATGAAAAGA+AGG | + | chr7_2:33237055-33237074 | None:intergenic | 40.0% | |
| ACACTTAGACATATGTCACC+TGG | - | chr7_2:33237185-33237204 | Msa1056250:CDS | 40.0% | |
| ! | GTTGCATATCACCCTGATTT+TGG | - | chr7_2:33237221-33237240 | Msa1056250:CDS | 40.0% |
| CATCATGAGGTCCAAAATCA+GGG | + | chr7_2:33237235-33237254 | None:intergenic | 40.0% | |
| TCATCATGAGGTCCAAAATC+AGG | + | chr7_2:33237236-33237255 | None:intergenic | 40.0% | |
| ! | TCTAGAGCTGGATGAGAAAT+TGG | - | chr7_2:33237265-33237284 | Msa1056250:CDS | 40.0% |
| GTAACTCCTTGGAAAAAGGA+AGG | - | chr7_2:33237338-33237357 | Msa1056250:CDS | 40.0% | |
| ! | CCATTTCCTTCCTTTTTCCA+AGG | + | chr7_2:33237347-33237366 | None:intergenic | 40.0% |
| CCTTGGAAAAAGGAAGGAAA+TGG | - | chr7_2:33237344-33237363 | Msa1056250:CDS | 40.0% | |
| GAAACATCTCCAAACCTCAA+TGG | - | chr7_2:33237687-33237706 | Msa1056250:intron | 40.0% | |
| ! | GGAGACCTATGAAAAGGTTT+TGG | + | chr7_2:33237928-33237947 | None:intergenic | 40.0% |
| AAAAATGTCTCCTCCTGACT+TGG | - | chr7_2:33238095-33238114 | Msa1056250:intron | 40.0% | |
| ! | CAAATTTTTGCCAAGTCAGG+AGG | + | chr7_2:33238108-33238127 | None:intergenic | 40.0% |
| !! | CTCCTGACTTGGCAAAAATT+TGG | - | chr7_2:33238106-33238125 | Msa1056250:intron | 40.0% |
| ! | TGCCAAATTTTTGCCAAGTC+AGG | + | chr7_2:33238111-33238130 | None:intergenic | 40.0% |
| ACTTGGCAAAAATTTGGCAC+TGG | - | chr7_2:33238112-33238131 | Msa1056250:intron | 40.0% | |
| ! | AATTTGGCACTGGAACTTGT+AGG | - | chr7_2:33238122-33238141 | Msa1056250:intron | 40.0% |
| GAACTTGTAGGAGTTTCAAG+AGG | - | chr7_2:33238134-33238153 | Msa1056250:intron | 40.0% | |
| AGGCTTAGCATTCATCAACT+CGG | - | chr7_2:33238154-33238173 | Msa1056250:intron | 40.0% | |
| AATGACATTAGAAAGCCGAG+TGG | - | chr7_2:33238387-33238406 | Msa1056250:intron | 40.0% | |
| TTGTCTACACCAACTTCCTA+GGG | + | chr7_2:33238474-33238493 | None:intergenic | 40.0% | |
| ATTGTCTACACCAACTTCCT+AGG | + | chr7_2:33238475-33238494 | None:intergenic | 40.0% | |
| ! | ACTAGTTTGAAAACTCCCCT+AGG | - | chr7_2:33238518-33238537 | Msa1056250:intron | 40.0% |
| TTGGAAAACTTGGGAAAGGA+AGG | + | chr7_2:33238640-33238659 | None:intergenic | 40.0% | |
| ! | TTCCTTTCCCAAGTTTTCCA+AGG | - | chr7_2:33238639-33238658 | Msa1056250:intron | 40.0% |
| GAAGACACCTTGGAAAACTT+GGG | + | chr7_2:33238649-33238668 | None:intergenic | 40.0% | |
| TGAAGACACCTTGGAAAACT+TGG | + | chr7_2:33238650-33238669 | None:intergenic | 40.0% | |
| TCAAATGCATGAAGACACCT+TGG | + | chr7_2:33238659-33238678 | None:intergenic | 40.0% | |
| AGGTGTCTTCATGCATTTGA+AGG | - | chr7_2:33238659-33238678 | Msa1056250:intron | 40.0% | |
| ACCTCTAAGCAACAAAGGAA+GGG | + | chr7_2:33238695-33238714 | None:intergenic | 40.0% | |
| CGTTTAAACTATGTCTGACG+AGG | + | chr7_2:33238743-33238762 | None:intergenic | 40.0% | |
| !!! | GAGAGCATTGTGCATCTTTT+TGG | - | chr7_2:33238794-33238813 | Msa1056250:intron | 40.0% |
| ! | CCTTTGATATGAGTCGACTT+TGG | + | chr7_2:33238834-33238853 | None:intergenic | 40.0% |
| ! | CCAAAGTCGACTCATATCAA+AGG | - | chr7_2:33238831-33238850 | Msa1056250:intron | 40.0% |
| AAAGGTTCCTCATACCTTTG+TGG | - | chr7_2:33238849-33238868 | Msa1056250:intron | 40.0% | |
| ! | AGAATCACCACAAAGGTATG+AGG | + | chr7_2:33238859-33238878 | None:intergenic | 40.0% |
| TAAGGAAAGAGAGAAAGGCA+GGG | + | chr7_2:33239238-33239257 | None:intergenic | 40.0% | |
| !! | GATTCTGATTGATTTGCTGG+TGG | + | chr7_2:33239394-33239413 | None:intergenic | 40.0% |
| TCAATAAGCTCCATACTACC+AGG | + | chr7_2:33239490-33239509 | None:intergenic | 40.0% | |
| TGGTAGTATGGAGCTTATTG+AGG | - | chr7_2:33239489-33239508 | Msa1056250:CDS | 40.0% | |
| GAGAATCACGAATCTAGATC+AGG | - | chr7_2:33239595-33239614 | Msa1056250:intron | 40.0% | |
| CTGTGGAGATCAATGGATAT+TGG | - | chr7_2:33239698-33239717 | Msa1056250:intron | 40.0% | |
| TGGAGATCAATGGATATTGG+AGG | - | chr7_2:33239701-33239720 | Msa1056250:intron | 40.0% | |
| GAGTTACATGGACATGATTC+TGG | - | chr7_2:33239735-33239754 | Msa1056250:intron | 40.0% | |
| GTGAATATGCTGGAATCAGA+TGG | - | chr7_2:33239823-33239842 | Msa1056250:intron | 40.0% | |
| ACTTTCTCTTACCTCCTTTC+AGG | + | chr7_2:33239978-33239997 | None:intergenic | 40.0% | |
| AAAGTGGGATGCATTTCATC+TGG | + | chr7_2:33240036-33240055 | None:intergenic | 40.0% | |
| !! | GCATCCCACTTTTGATCTTA+TGG | - | chr7_2:33240044-33240063 | Msa1056250:intron | 40.0% |
| !! | CCCACTTTTGATCTTATGGA+AGG | - | chr7_2:33240048-33240067 | Msa1056250:intron | 40.0% |
| AAGATCTACAGCCCTATATC+AGG | - | chr7_2:33240196-33240215 | Msa1056250:intron | 40.0% | |
| TACATCCTTCACAGTCCTTA+TGG | - | chr7_2:33240443-33240462 | Msa1056250:intron | 40.0% | |
| ! | CCTCGTCACTTTAAATAGAC+CGG | - | chr7_2:33240470-33240489 | Msa1056250:intron | 40.0% |
| AGGTGGAATGCGATACATAG+AGG | + | chr7_2:33236223-33236242 | None:intergenic | 45.0% | |
| GGATAAAGAGTTGAACGTCC+TGG | + | chr7_2:33237033-33237052 | None:intergenic | 45.0% | |
| GCAACAGAAATCGATGATCC+AGG | + | chr7_2:33237206-33237225 | None:intergenic | 45.0% | |
| !!! | CTGACAGGTGAGCCATTTTT+GGG | + | chr7_2:33237839-33237858 | None:intergenic | 45.0% |
| !! | ACTGACAGGTGAGCCATTTT+TGG | + | chr7_2:33237840-33237859 | None:intergenic | 45.0% |
| GGGCAAAGTCTAATACTGAC+AGG | + | chr7_2:33237854-33237873 | None:intergenic | 45.0% | |
| GTCAGTATTAGACTTTGCCC+AGG | - | chr7_2:33237854-33237873 | Msa1056250:intron | 45.0% | |
| GCATTCTGTTGCTCTTCTCA+AGG | - | chr7_2:33237976-33237995 | Msa1056250:intron | 45.0% | |
| TCTAAGTGAAGCTGACCACT+CGG | + | chr7_2:33238405-33238424 | None:intergenic | 45.0% | |
| AACTTGTCAAGCTATGCCCT+AGG | - | chr7_2:33238455-33238474 | Msa1056250:intron | 45.0% | |
| TCTTCATGTCCTCCTTGAGT+TGG | - | chr7_2:33238604-33238623 | Msa1056250:intron | 45.0% | |
| CACCTTGGAAAACTTGGGAA+AGG | + | chr7_2:33238644-33238663 | None:intergenic | 45.0% | |
| GACCTCTAAGCAACAAAGGA+AGG | + | chr7_2:33238696-33238715 | None:intergenic | 45.0% | |
| AGGTGACCTCTAAGCAACAA+AGG | + | chr7_2:33238700-33238719 | None:intergenic | 45.0% | |
| GTAAGGAAAGAGAGAAAGGC+AGG | + | chr7_2:33239239-33239258 | None:intergenic | 45.0% | |
| CAAAGAACTGCATCTTCGTC+AGG | + | chr7_2:33239310-33239329 | None:intergenic | 45.0% | |
| AAGCTAGTGACGAGGAGTTA+AGG | - | chr7_2:33239653-33239672 | Msa1056250:intron | 45.0% | |
| AGCTAGTGACGAGGAGTTAA+GGG | - | chr7_2:33239654-33239673 | Msa1056250:intron | 45.0% | |
| CTTTCAGCTGTGGAGATCAA+TGG | - | chr7_2:33239691-33239710 | Msa1056250:intron | 45.0% | |
| ! | GGAATCAGATGGATTTCCGA+AGG | - | chr7_2:33239834-33239853 | Msa1056250:intron | 45.0% |
| !! | GATTTCCGAAGGTACTTGCA+AGG | - | chr7_2:33239845-33239864 | Msa1056250:intron | 45.0% |
| CAATGCCTTGCAAGTACCTT+CGG | + | chr7_2:33239853-33239872 | None:intergenic | 45.0% | |
| TTGCTTGCATGTGTATGCCA+AGG | - | chr7_2:33239870-33239889 | Msa1056250:intron | 45.0% | |
| ATTGCATGCAAAGTGGTGTG+TGG | - | chr7_2:33239908-33239927 | Msa1056250:intron | 45.0% | |
| TGTGGAAGTTGGATGAGAAG+CGG | - | chr7_2:33239926-33239945 | Msa1056250:intron | 45.0% | |
| GCTAGAGAAATCCTGAAAGG+AGG | - | chr7_2:33239964-33239983 | Msa1056250:intron | 45.0% | |
| TGGAAGGCAATGAAGAGACA+CGG | + | chr7_2:33240122-33240141 | None:intergenic | 45.0% | |
| !! | TTTTCAGAGAGCGTGCGAAA+TGG | - | chr7_2:33240166-33240185 | Msa1056250:intron | 45.0% |
| ! | TTTCAGAGAGCGTGCGAAAT+GGG | - | chr7_2:33240167-33240186 | Msa1056250:intron | 45.0% |
| AAACCTTCTGCAGAAAGACC+TGG | + | chr7_2:33240324-33240343 | None:intergenic | 45.0% | |
| ! | CCGGTCTATTTAAAGTGACG+AGG | + | chr7_2:33240473-33240492 | None:intergenic | 45.0% |
| ! | ATAAGCGAGTACTGTGCTTC+CGG | + | chr7_2:33240492-33240511 | None:intergenic | 45.0% |
| !! | CTAATTAAAAAATATAATAA+GGG | + | chr7_2:33237949-33237968 | None:intergenic | 5.0% |
| !! | TCTAATTAAAAAATATAATA+AGG | + | chr7_2:33237950-33237969 | None:intergenic | 5.0% |
| !!! | AAAATTTTAATTAAAAGAAA+TGG | + | chr7_2:33238943-33238962 | None:intergenic | 5.0% |
| CCGGGCAGTTGAGATCAATT+CGG | + | chr7_2:33236107-33236126 | None:intergenic | 50.0% | |
| CCGAATTGATCTCAACTGCC+CGG | - | chr7_2:33236104-33236123 | Msa1056250:three_prime_UTR | 50.0% | |
| AGTTCGGCTGTGTGTGTTTC+CGG | + | chr7_2:33236126-33236145 | None:intergenic | 50.0% | |
| CTTCCAACGACGGTCAAGTT+CGG | + | chr7_2:33236142-33236161 | None:intergenic | 50.0% | |
| ! | ACCTGGAGTTTGGTTTCTGG+CGG | + | chr7_2:33236170-33236189 | None:intergenic | 50.0% |
| ! | TCGCATTCCACCTCGATTTG+CGG | - | chr7_2:33236230-33236249 | Msa1056250:three_prime_UTR | 50.0% |
| TTTACAGCAGCCGCAAATCG+AGG | + | chr7_2:33236243-33236262 | None:intergenic | 50.0% | |
| GCACGAACACTCCTCGTATT+AGG | - | chr7_2:33236809-33236828 | Msa1056250:CDS | 50.0% | |
| GCATTATGAAGCACGGACAC+CGG | + | chr7_2:33236938-33236957 | None:intergenic | 50.0% | |
| CAAGCTATGCCCTAGGAAGT+TGG | - | chr7_2:33238462-33238481 | Msa1056250:intron | 50.0% | |
| CTACATGCACCAACTCAAGG+AGG | + | chr7_2:33238616-33238635 | None:intergenic | 50.0% | |
| GGACTACATGCACCAACTCA+AGG | + | chr7_2:33238619-33238638 | None:intergenic | 50.0% | |
| ! | GCCCTTCCTTTGTTGCTTAG+AGG | - | chr7_2:33238691-33238710 | Msa1056250:intron | 50.0% |
| TTAGAGGTCACCTCCCTCAA+AGG | - | chr7_2:33238707-33238726 | Msa1056250:intron | 50.0% | |
| AGGGCAAAGAGAGCCTTTGA+GGG | + | chr7_2:33238723-33238742 | None:intergenic | 50.0% | |
| AGTGACGAGGAGTTAAGGGT+TGG | - | chr7_2:33239658-33239677 | Msa1056250:intron | 50.0% | |
| GGAGTTAAGGGTTGGATTGC+AGG | - | chr7_2:33239666-33239685 | Msa1056250:intron | 50.0% | |
| ATTGCAGGCTCTTTCAGCTG+TGG | - | chr7_2:33239681-33239700 | Msa1056250:intron | 50.0% | |
| GCAAAGTGGTGTGTGGAAGT+TGG | - | chr7_2:33239915-33239934 | Msa1056250:intron | 50.0% | |
| GTGGAAGTTGGATGAGAAGC+GGG | - | chr7_2:33239927-33239946 | Msa1056250:intron | 50.0% | |
| AGGCAATGAAGAGACACGGA+AGG | + | chr7_2:33240118-33240137 | None:intergenic | 50.0% | |
| !! | AGAATGGAGAAGCGTTCAGC+TGG | + | chr7_2:33240147-33240166 | None:intergenic | 50.0% |
| ! | CGCACGCTCTCTGAAAAGAA+TGG | + | chr7_2:33240163-33240182 | None:intergenic | 50.0% |
| TTCAGGGATCTGGATGTACC+AGG | - | chr7_2:33240303-33240322 | Msa1056250:intron | 50.0% | |
| GTACCAGGTCTTTCTGCAGA+AGG | - | chr7_2:33240318-33240337 | Msa1056250:intron | 50.0% | |
| GAAGGCCATAAGGACTGTGA+AGG | + | chr7_2:33240451-33240470 | None:intergenic | 50.0% | |
| AAGTGACGAGGAAGGCCATA+AGG | + | chr7_2:33240461-33240480 | None:intergenic | 50.0% | |
| ACCCAAAATGTAGCCGCGCT+CGG | - | chr7_2:33236044-33236063 | Msa1056250:three_prime_UTR | 55.0% | |
| GTTCGGCTGTGTGTGTTTCC+GGG | + | chr7_2:33236125-33236144 | None:intergenic | 55.0% | |
| CAATTGCGGAATCGCGGTGA+CGG | + | chr7_2:33236281-33236300 | None:intergenic | 55.0% | |
| AGTGCGCAATTGCGGAATCG+CGG | + | chr7_2:33236287-33236306 | None:intergenic | 55.0% | |
| TCCTCGTATTAGGCGTGTCC+CGG | - | chr7_2:33236819-33236838 | Msa1056250:CDS | 55.0% | |
| TATTAGGCGTGTCCCGGTGT+CGG | - | chr7_2:33236825-33236844 | Msa1056250:CDS | 55.0% | |
| GTCAGTGTTCGTGTCGTGTC+CGG | - | chr7_2:33236916-33236935 | Msa1056250:CDS | 55.0% | |
| CTGGGTACAAACCCGGACAA+AGG | + | chr7_2:33237014-33237033 | None:intergenic | 55.0% | |
| CTTTGTCCGGGTTTGTACCC+AGG | - | chr7_2:33237012-33237031 | Msa1056250:CDS | 55.0% | |
| GAACGTCCTGGGTACAAACC+CGG | + | chr7_2:33237021-33237040 | None:intergenic | 55.0% | |
| CCTGAAGTCTGCTGTGGTTC+TGG | + | chr7_2:33237155-33237174 | None:intergenic | 55.0% | |
| CCAGAACCACAGCAGACTTC+AGG | - | chr7_2:33237152-33237171 | Msa1056250:CDS | 55.0% | |
| GAACCACAGCAGACTTCAGG+AGG | - | chr7_2:33237155-33237174 | Msa1056250:CDS | 55.0% | |
| ACAGCAGACTTCAGGAGGAG+CGG | - | chr7_2:33237160-33237179 | Msa1056250:CDS | 55.0% | |
| ! | GCAAAGAGAGCCTTTGAGGG+AGG | + | chr7_2:33238720-33238739 | None:intergenic | 55.0% |
| GAGGGCAAAGAGAGCCTTTG+AGG | + | chr7_2:33238724-33238743 | None:intergenic | 55.0% | |
| AAGCGTTCAGCTGGAGTGGA+AGG | + | chr7_2:33240138-33240157 | None:intergenic | 55.0% | |
| ! | GAGAGCGTGCGAAATGGGAA+TGG | - | chr7_2:33240172-33240191 | Msa1056250:intron | 55.0% |
| ! | GCCGAGCGCGGCTACATTTT+GGG | + | chr7_2:33236048-33236067 | None:intergenic | 60.0% |
| ! | AGCCGAGCGCGGCTACATTT+TGG | + | chr7_2:33236049-33236068 | None:intergenic | 60.0% |
| ACAAAGGGCAAAGCCGAGCG+CGG | + | chr7_2:33236060-33236079 | None:intergenic | 60.0% | |
| CAGCCGAACTTGACCGTCGT+TGG | - | chr7_2:33236136-33236155 | Msa1056250:three_prime_UTR | 60.0% | |
| GGCGGCGTTTCTTCCAACGA+CGG | + | chr7_2:33236152-33236171 | None:intergenic | 60.0% | |
| GCCGCCAGAAACCAAACTCC+AGG | - | chr7_2:33236166-33236185 | Msa1056250:three_prime_UTR | 60.0% | |
| ACAGCAGCCGCAAATCGAGG+TGG | + | chr7_2:33236240-33236259 | None:intergenic | 60.0% | |
| ACCGGGACACGCCTAATACG+AGG | + | chr7_2:33236823-33236842 | None:intergenic | 60.0% | |
| GCTCCTCCTGAAGTCTGCTG+TGG | + | chr7_2:33237161-33237180 | None:intergenic | 60.0% | |
| !! | GGAGAAGCGTTCAGCTGGAG+TGG | + | chr7_2:33240142-33240161 | None:intergenic | 60.0% |
| !! | TCGGTGTCGTGTCCGACACC+GGG | + | chr7_2:33236840-33236859 | None:intergenic | 65.0% |
| !! | GTCGGTGTCGTGTCCGACAC+CGG | + | chr7_2:33236841-33236860 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 33236039 | 33240659 | 33236039 | ID=Msa1056250;Name=Msa1056250 |
| chr7_2 | mRNA | 33236039 | 33240659 | 33236039 | ID=Msa1056250-mRNA-1;Parent=Msa1056250;Name=Msa1056250-mRNA-1;_AED=0.03;_eAED=0.03;_QI=161|1|1|1|0.66|0.5|4|249|398 |
| chr7_2 | exon | 33236039 | 33236390 | 33236039 | ID=Msa1056250-mRNA-1:exon:6589;Parent=Msa1056250-mRNA-1 |
| chr7_2 | exon | 33236481 | 33237410 | 33236481 | ID=Msa1056250-mRNA-1:exon:6588;Parent=Msa1056250-mRNA-1 |
| chr7_2 | exon | 33239389 | 33239564 | 33239389 | ID=Msa1056250-mRNA-1:exon:6587;Parent=Msa1056250-mRNA-1 |
| chr7_2 | exon | 33240511 | 33240659 | 33240511 | ID=Msa1056250-mRNA-1:exon:6586;Parent=Msa1056250-mRNA-1 |
| chr7_2 | five_prime_UTR | 33240511 | 33240659 | 33240511 | ID=Msa1056250-mRNA-1:five_prime_utr;Parent=Msa1056250-mRNA-1 |
| chr7_2 | five_prime_UTR | 33239553 | 33239564 | 33239553 | ID=Msa1056250-mRNA-1:five_prime_utr;Parent=Msa1056250-mRNA-1 |
| chr7_2 | CDS | 33239389 | 33239552 | 33239389 | ID=Msa1056250-mRNA-1:cds;Parent=Msa1056250-mRNA-1 |
| chr7_2 | CDS | 33236481 | 33237410 | 33236481 | ID=Msa1056250-mRNA-1:cds;Parent=Msa1056250-mRNA-1 |
| chr7_2 | CDS | 33236288 | 33236390 | 33236288 | ID=Msa1056250-mRNA-1:cds;Parent=Msa1056250-mRNA-1 |
| chr7_2 | three_prime_UTR | 33236039 | 33236287 | 33236039 | ID=Msa1056250-mRNA-1:three_prime_utr;Parent=Msa1056250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
