AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1058620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1058620 MtrunA17_Chr7g0249331 97.500 400 10 0 1 400 1 400 0.0 802
Msa1058620 MtrunA17_Chr2g0284641 34.615 260 154 3 70 314 238 496 2.72e-46 166
Msa1058620 MtrunA17_Chr8g0379921 35.938 256 144 4 64 302 228 480 1.70e-44 161
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1058620 AT5G16460.1 48.534 307 135 4 15 312 35 327 1.75e-98 298
Msa1058620 AT2G34380.1 31.734 271 165 4 43 302 218 479 6.20e-43 157
Msa1058620 AT1G29760.1 33.203 256 159 3 64 307 257 512 7.88e-41 152

Find 254 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTCCGCAATTGTGTTAA+TGG 0.114954 7_2:+43619648 Msa1058620:five_prime_UTR
TACCATCATTTATTAAAATA+TGG 0.125670 7_2:-43619722 None:intergenic
TCATCAAATATCTTGTATTT+TGG 0.158561 7_2:-43620859 None:intergenic
TTCTCCCATACCTTTCTTAT+TGG 0.164687 7_2:-43619293 None:intergenic
TCTGTCCTTTGTTCTGATTC+TGG 0.165253 7_2:+43621948 Msa1058620:CDS
ACTCTTTAGCCCAAGGTAAA+TGG 0.168110 7_2:-43623218 None:intergenic
TAGAGAGCTTGGGGTGTTTC+AGG 0.185212 7_2:+43622197 Msa1058620:CDS
TGCTTCTCTTATATTGTTAC+AGG 0.200122 7_2:+43623307 Msa1058620:CDS
CTCTTCTCTTCTAACATTTC+AGG 0.202321 7_2:-43621149 None:intergenic
GAGTTGGGTTGGTTCGGTTT+TGG 0.211599 7_2:+43621983 Msa1058620:CDS
GCAGGTTCCTTGAAATAAAA+TGG 0.221088 7_2:+43618901 Msa1058620:intron
CTCTTAAGTCTAACTACTTT+TGG 0.221962 7_2:+43620205 Msa1058620:five_prime_UTR
GTATCAGTGCGTTATAAATT+TGG 0.225842 7_2:+43619805 Msa1058620:five_prime_UTR
TGGGCTTCAATGTTGAGTTT+TGG 0.227022 7_2:-43621400 None:intergenic
TGGATCAATGTTTCTTCTAA+TGG 0.244000 7_2:+43620614 Msa1058620:five_prime_UTR
ACCTTTCTTATTGGCTTTCA+TGG 0.257848 7_2:-43619284 None:intergenic
TTGATTAGATATATCTTTAC+TGG 0.264106 7_2:-43621455 None:intergenic
ATATTTAGTTGCTTTGAAAA+TGG 0.273001 7_2:+43623641 Msa1058620:three_prime_UTR
CTGGCTTCTGTGGTGGGAGT+TGG 0.273020 7_2:+43621967 Msa1058620:CDS
AATGGTTGATAAATTGCTTT+TGG 0.274567 7_2:+43623659 Msa1058620:three_prime_UTR
ATGGGAGTTTATAACAATTT+CGG 0.277042 7_2:-43623199 None:intergenic
AAGGCCTATATATTTATTAT+TGG 0.284421 7_2:+43619436 Msa1058620:five_prime_UTR
GAGATTAAGTTGGTGTAAAA+TGG 0.287295 7_2:-43619582 None:intergenic
AATCAGTGTGCATAGGTTAA+AGG 0.288320 7_2:+43623616 Msa1058620:CDS
GAGATCAATGGTTGTGATAT+TGG 0.289628 7_2:+43619238 Msa1058620:five_prime_UTR
TATGCCCCATTACGATTTAC+AGG 0.297352 7_2:+43620289 Msa1058620:five_prime_UTR
TCTGCAAATTTGAATGAAAA+TGG 0.298193 7_2:-43618207 None:intergenic
AGATCAATGGTTGTGATATT+GGG 0.305246 7_2:+43619239 Msa1058620:five_prime_UTR
TTGTCCTTATATGAGCTCTT+AGG 0.306819 7_2:+43620754 Msa1058620:five_prime_UTR
TGATGGGGCACTATAATTTC+AGG 0.308556 7_2:+43621217 Msa1058620:five_prime_UTR
TGCACGCAAGATGTGGTAAA+TGG 0.310629 7_2:+43620939 Msa1058620:five_prime_UTR
AATACCGATGGATGAGAAAA+TGG 0.311096 7_2:-43618231 None:intergenic
CAGTTTGCGCTGTGCAATAT+TGG 0.315099 7_2:+43619138 Msa1058620:five_prime_UTR
GATAAGAGTGTGTTAGGATT+TGG 0.317639 7_2:+43621056 Msa1058620:five_prime_UTR
CATGTCATCATCACAACTAT+TGG 0.331708 7_2:+43620664 Msa1058620:five_prime_UTR
GTTGCATCTGTTACTATGTT+TGG 0.335200 7_2:+43619670 Msa1058620:five_prime_UTR
ACCAAGATGCCGTGGCAAAT+TGG 0.344869 7_2:-43621535 None:intergenic
TTGTTCTGTGCTTGCACTAC+AGG 0.344974 7_2:-43619169 None:intergenic
GGAAGTGGACTTTCTATGTT+TGG 0.344980 7_2:+43623253 Msa1058620:CDS
CATTCATCTTGCAGCTTCAA+TGG 0.345202 7_2:+43621316 Msa1058620:five_prime_UTR
TTACAACTTGGAGAATTATC+AGG 0.347917 7_2:+43623408 Msa1058620:CDS
TCACATTTCCGTTTACTGAT+AGG 0.349301 7_2:-43622951 None:intergenic
CCATGATAATGAAAGTAGTT+TGG 0.354057 7_2:+43619550 Msa1058620:five_prime_UTR
CTAAAGAGTTAATTCGGAAT+TGG 0.354176 7_2:+43623232 Msa1058620:CDS
TCTACCCTGTAAATCGTAAT+GGG 0.354469 7_2:-43620294 None:intergenic
TGGTGGAGTTAGTGCTGCTT+GGG 0.354811 7_2:+43622086 Msa1058620:CDS
TTTCATATATTTCTTATGAA+TGG 0.358342 7_2:-43620532 None:intergenic
CTTGGGCTAAAGAGTTAATT+CGG 0.360534 7_2:+43623226 Msa1058620:CDS
AAAACCTAAGAGCTCATATA+AGG 0.362276 7_2:-43620758 None:intergenic
TGGCTTCTGTGGTGGGAGTT+GGG 0.365270 7_2:+43621968 Msa1058620:CDS
ACCATCATTTATTAAAATAT+GGG 0.369723 7_2:-43619721 None:intergenic
CTAAGCTGTGCCTGTATCTA+TGG 0.371051 7_2:+43623738 Msa1058620:three_prime_UTR
AATAGTACAGTATGAGAATC+AGG 0.374522 7_2:-43620419 None:intergenic
TTCTGTGGTGGGAGTTGGGT+TGG 0.374529 7_2:+43621972 Msa1058620:CDS
CATGTTCCCATAACTATTGC+TGG 0.375703 7_2:+43619319 Msa1058620:five_prime_UTR
TTCCATTGCCTTTCTCTTCG+AGG 0.375846 7_2:-43619090 None:intergenic
TTTCTGAGTTGTTGAGGAAA+TGG 0.378781 7_2:+43623445 Msa1058620:CDS
TGAAGACAATGTCCTGGTTC+GGG 0.379961 7_2:+43619063 Msa1058620:five_prime_UTR
AGTAGTCGTCATGCTAATAC+TGG 0.380376 7_2:-43623544 None:intergenic
CCAAACTACTTTCATTATCA+TGG 0.380773 7_2:-43619550 None:intergenic
AAGTTCCTGCTCTTGGATGC+AGG 0.381134 7_2:-43623152 None:intergenic
GCTCCTTCACAAATAGCTTA+TGG 0.384887 7_2:+43621862 Msa1058620:CDS
GCCAATTTGCCACGGCATCT+TGG 0.384924 7_2:+43621534 Msa1058620:five_prime_UTR
ACAGAAAATGTGTGACCAAC+TGG 0.385814 7_2:-43622138 None:intergenic
TTGATTTCAATTCATATGTA+AGG 0.391536 7_2:+43619417 Msa1058620:five_prime_UTR
GTTTAAAAGGGCACCCTAAT+GGG 0.391573 7_2:+43620781 Msa1058620:five_prime_UTR
CCTGCCAATAATAAATATAT+AGG 0.392706 7_2:-43619440 None:intergenic
CTCTTTAGCCCAAGGTAAAT+GGG 0.397718 7_2:-43623217 None:intergenic
TTGTGAAGGAGCATTGTCTT+TGG 0.398244 7_2:-43621851 None:intergenic
TCTCTATTGAAGTCAGATTC+AGG 0.401208 7_2:-43622180 None:intergenic
AGTTTGCGCTGTGCAATATT+GGG 0.401915 7_2:+43619139 Msa1058620:five_prime_UTR
AGCCTCTTAGAGTGAATTAG+AGG 0.405082 7_2:+43619920 Msa1058620:five_prime_UTR
CAATATTGCACAGCGCAAAC+TGG 0.407075 7_2:-43619137 None:intergenic
TGGTGGGAGTTGGGTTGGTT+CGG 0.407828 7_2:+43621977 Msa1058620:CDS
TGTTTAAAAGGGCACCCTAA+TGG 0.408337 7_2:+43620780 Msa1058620:five_prime_UTR
CAAAAGTAGTTAGACTTAAG+AGG 0.408832 7_2:-43620204 None:intergenic
CTTGATTGATGTTAATGCTC+TGG 0.408845 7_2:+43620995 Msa1058620:five_prime_UTR
CAAGCCAACCATGCATGTTA+AGG 0.416328 7_2:+43622983 Msa1058620:CDS
ACTTTATTTACCATAGATAC+AGG 0.417062 7_2:-43623748 None:intergenic
TTGAAGACAATGTCCTGGTT+CGG 0.418613 7_2:+43619062 Msa1058620:five_prime_UTR
ACTGTCCTTGCAAGTCGAAT+TGG 0.423157 7_2:-43623018 None:intergenic
TGTTATTTGCATGAGGTTGT+AGG 0.423932 7_2:+43619954 Msa1058620:five_prime_UTR
AGAGATGAAGTTCCTGCTCT+TGG 0.428720 7_2:-43623159 None:intergenic
CCTATATATTTATTATTGGC+AGG 0.429270 7_2:+43619440 Msa1058620:five_prime_UTR
CCTTGTCCCAGCAATAGTTA+TGG 0.430126 7_2:-43619326 None:intergenic
CTTGTCCCAGCAATAGTTAT+GGG 0.433835 7_2:-43619325 None:intergenic
GTGAGGTTTCTGAGTTGTTG+AGG 0.434573 7_2:+43623439 Msa1058620:CDS
CTGATTCTGGCTTCTGTGGT+GGG 0.434678 7_2:+43621961 Msa1058620:CDS
ATCAGTGTGCATAGGTTAAA+GGG 0.437893 7_2:+43623617 Msa1058620:exon
CCTTTCTTATTGGCTTTCAT+GGG 0.438890 7_2:-43619283 None:intergenic
TTTGTGGAAGCTAGGAAACT+AGG 0.442454 7_2:-43619508 None:intergenic
CTGACTTCAATAGAGAGCTT+GGG 0.442911 7_2:+43622187 Msa1058620:CDS
ATGGTGGAGTTAGTGCTGCT+TGG 0.443562 7_2:+43622085 Msa1058620:CDS
CACCTCTAATTCACTCTAAG+AGG 0.447337 7_2:-43619922 None:intergenic
TATAAACTCCCATTTACCTT+GGG 0.449114 7_2:+43623209 Msa1058620:CDS
GATATTGGGGTGAGAGCTCT+TGG 0.450174 7_2:+43619253 Msa1058620:five_prime_UTR
TTCTACCCTGTAAATCGTAA+TGG 0.452522 7_2:-43620295 None:intergenic
CGGACCTATAGTTACGTTGA+AGG 0.453624 7_2:+43619036 Msa1058620:five_prime_UTR
AAACTTTCATTAACAATGAC+AGG 0.455493 7_2:-43622015 None:intergenic
GTAAATGGAATTGTTGATAA+GGG 0.457760 7_2:+43620954 Msa1058620:five_prime_UTR
GTATAGTAATGAAGCTGAAA+CGG 0.459213 7_2:-43619981 None:intergenic
ACTTGCAAGGACAGTTATGA+TGG 0.459966 7_2:+43623026 Msa1058620:CDS
GACAATGATAAGAGTGTGTT+AGG 0.462756 7_2:+43621050 Msa1058620:five_prime_UTR
TTTCAAAATCTGTTCGGACT+CGG 0.462962 7_2:+43618144 Msa1058620:five_prime_UTR
CTGTCAAAAGAGAGTAGAAA+GGG 0.463226 7_2:-43621795 None:intergenic
CAGGGTTACTCTTATAGCAT+TGG 0.465013 7_2:-43623133 None:intergenic
GAAGTGGACTTTCTATGTTT+GGG 0.466193 7_2:+43623254 Msa1058620:CDS
GAAAGCCAATAAGAAAGGTA+TGG 0.467226 7_2:+43619288 Msa1058620:five_prime_UTR
TCTGACTTCAATAGAGAGCT+TGG 0.468209 7_2:+43622186 Msa1058620:CDS
GCAGAACTCCTATCAGTAAA+CGG 0.468312 7_2:+43622943 Msa1058620:CDS
AGTTAATTCGGAATTGGAAG+TGG 0.468718 7_2:+43623238 Msa1058620:CDS
TGAAGGGCAGCCATTGTTGT+CGG 0.470065 7_2:+43620361 Msa1058620:five_prime_UTR
AGAGATCAATCACAACAGTT+TGG 0.470944 7_2:-43621125 None:intergenic
GTAAGATAATTTCGCGTCGC+GGG 0.474324 7_2:-43620107 None:intergenic
GTTGCCACATTCTTTACCAC+AGG 0.480636 7_2:-43620172 None:intergenic
TGCATGACAAGCTTGCAGTC+TGG 0.482060 7_2:+43620884 Msa1058620:five_prime_UTR
GGTAAATGGAATTGTTGATA+AGG 0.482125 7_2:+43620953 Msa1058620:five_prime_UTR
AGACTCTTTCAAAATCTGTT+CGG 0.482558 7_2:+43618138 Msa1058620:five_prime_UTR
CAAGGATCGGTGATGGGGAA+TGG 0.483479 7_2:+43619344 Msa1058620:five_prime_UTR
CTGGGACAAGGATCGGTGAT+GGG 0.483554 7_2:+43619338 Msa1058620:five_prime_UTR
GTTGGTGTGCCAGAAAATAT+TGG 0.483985 7_2:+43623513 Msa1058620:CDS
CAAGTCGAATTGGTGAGCTT+CGG 0.489721 7_2:-43623008 None:intergenic
TATAGTAATGAAGCTGAAAC+GGG 0.490911 7_2:-43619980 None:intergenic
AAGAGTGCTCGTTGTGGATG+GGG 0.493016 7_2:+43619111 Msa1058620:five_prime_UTR
GGTTTGCCCATCATGATGGT+AGG 0.494775 7_2:-43621830 None:intergenic
ATCAGGCACGAGACATGCTT+GGG 0.495002 7_2:-43620402 None:intergenic
TCCTTGAAATAAAATGGCTC+TGG 0.495526 7_2:+43618907 Msa1058620:five_prime_UTR
TTGTATAATAATATGATCAA+TGG 0.495823 7_2:+43623697 Msa1058620:three_prime_UTR
ATATATTTCTTATGAATGGA+TGG 0.495893 7_2:-43620528 None:intergenic
TTATAAACTCCCATTTACCT+TGG 0.496892 7_2:+43623208 Msa1058620:CDS
CACCAACACTACCATGTGTC+AGG 0.497942 7_2:-43623497 None:intergenic
TCTGATTCTGGCTTCTGTGG+TGG 0.499027 7_2:+43621960 Msa1058620:CDS
GGAAGAGTGCTCGTTGTGGA+TGG 0.499526 7_2:+43619109 Msa1058620:five_prime_UTR
TCAGCTTAAAGAGAGTCCTT+TGG 0.500245 7_2:-43621026 None:intergenic
AATCAGGCACGAGACATGCT+TGG 0.503197 7_2:-43620403 None:intergenic
CTTTGGTTTGCCCATCATGA+TGG 0.504289 7_2:-43621834 None:intergenic
CGAATTAACTCTTTAGCCCA+AGG 0.504302 7_2:-43623225 None:intergenic
AGTTATGATGGGTGTGCCAT+TGG 0.506298 7_2:+43623038 Msa1058620:CDS
CAGAGCATTAACATCAATCA+AGG 0.513001 7_2:-43620994 None:intergenic
GCACAGAACAATGGATGGGC+AGG 0.514058 7_2:+43619181 Msa1058620:five_prime_UTR
TGTTCTGATTCTGGCTTCTG+TGG 0.515692 7_2:+43621957 Msa1058620:CDS
TCAGATTTATGGTCGAAGAC+AGG 0.518932 7_2:+43619006 Msa1058620:five_prime_UTR
TAGACTGCAACATCATTCTA+CGG 0.520737 7_2:-43619759 None:intergenic
AGGTGTCACAATCATGTTGA+AGG 0.521471 7_2:+43620557 Msa1058620:five_prime_UTR
CCCATGAAAGCCAATAAGAA+AGG 0.521845 7_2:+43619283 Msa1058620:five_prime_UTR
CTTCAACGTAACTATAGGTC+CGG 0.524498 7_2:-43619035 None:intergenic
GCTGGGACAAGGATCGGTGA+TGG 0.524649 7_2:+43619337 Msa1058620:five_prime_UTR
AGGACAATACTTTAGAAAAG+TGG 0.525580 7_2:-43620738 None:intergenic
AACACCTTCAACGTAACTAT+AGG 0.525623 7_2:-43619040 None:intergenic
CATTAACACAATTGCGGAGA+GGG 0.526112 7_2:-43619647 None:intergenic
GAAGAGTGCTCGTTGTGGAT+GGG 0.527267 7_2:+43619110 Msa1058620:five_prime_UTR
CGGGAGTTCCTCGAAGAGAA+AGG 0.531311 7_2:+43619082 Msa1058620:five_prime_UTR
ATTATCAGGAGATGAGAGTG+AGG 0.531785 7_2:+43623422 Msa1058620:CDS
GTCTAGCACTCTAGCCAAGT+TGG 0.532422 7_2:-43621432 None:intergenic
ATTCAAAACAGAGATTAAGT+TGG 0.532675 7_2:-43619592 None:intergenic
GTAACCCTGCATCCAAGAGC+AGG 0.533000 7_2:+43623147 Msa1058620:CDS
CATAAGAAATATATGAAATG+AGG 0.537248 7_2:+43620537 Msa1058620:five_prime_UTR
TTGTGGAAGCTAGGAAACTA+GGG 0.540709 7_2:-43619507 None:intergenic
TGATTAGATATATCTTTACT+GGG 0.542568 7_2:-43621454 None:intergenic
TCTGAGTCCTACCATCATGA+TGG 0.543612 7_2:+43621823 Msa1058620:CDS
ATTTCGGCTTCGTATAGTTG+TGG 0.544381 7_2:-43623183 None:intergenic
AGTGCGTTATAAATTTGGTA+TGG 0.545076 7_2:+43619810 Msa1058620:five_prime_UTR
TTCCACATAGCAGCATCGTA+AGG 0.545355 7_2:+43619855 Msa1058620:five_prime_UTR
AACTTAACTATCCATCTCCA+TGG 0.545471 7_2:+43621696 Msa1058620:exon
ATCACAGCAAGTTCTAGTGA+TGG 0.545612 7_2:-43620911 None:intergenic
TGCAGTGTTGTTGCATGCTG+TGG 0.545621 7_2:-43621593 None:intergenic
ACTATTGCTGGGACAAGGAT+CGG 0.546867 7_2:+43619331 Msa1058620:five_prime_UTR
GCAGTCTAGAAACTAAATGA+AGG 0.549761 7_2:+43619774 Msa1058620:five_prime_UTR
AAAGCCAATAAGAAAGGTAT+GGG 0.553213 7_2:+43619289 Msa1058620:five_prime_UTR
TGCAAATTGCCAATTTGCCA+CGG 0.553446 7_2:+43621526 Msa1058620:five_prime_UTR
TGCAAGCACAGAACAATGGA+TGG 0.553793 7_2:+43619176 Msa1058620:five_prime_UTR
AAACTAAATGAAGGAAAGAT+CGG 0.555295 7_2:+43619783 Msa1058620:five_prime_UTR
TTAAATGAAAATACAGCTGT+AGG 0.555515 7_2:-43622063 None:intergenic
TTGGCAGGCAAGACATATCA+TGG 0.556805 7_2:+43619455 Msa1058620:five_prime_UTR
AGTTCCTGCTCTTGGATGCA+GGG 0.559736 7_2:-43623151 None:intergenic
CCATAACTATTGCTGGGACA+AGG 0.560406 7_2:+43619326 Msa1058620:five_prime_UTR
CTTCGAGGAACTCCCGAACC+AGG 0.562244 7_2:-43619075 None:intergenic
GGAACCTTAACATGCATGGT+TGG 0.562646 7_2:-43622987 None:intergenic
AAATCAATGTAGAAATATTG+AGG 0.563339 7_2:+43623088 Msa1058620:CDS
ATCATCTTCAACAGCAACAC+TGG 0.566618 7_2:-43623580 None:intergenic
ATCCTTACGATGCTGCTATG+TGG 0.567443 7_2:-43619857 None:intergenic
TGGGCAGGTATCATTGTGAA+TGG 0.567768 7_2:+43619196 Msa1058620:five_prime_UTR
AACATATTGATATACTTGCA+TGG 0.568611 7_2:-43621492 None:intergenic
CTTCGGAACCTTAACATGCA+TGG 0.569206 7_2:-43622991 None:intergenic
ACTTAACTATCCATCTCCAT+GGG 0.571287 7_2:+43621697 Msa1058620:exon
TAGAGTAAGTCTGCTGGTGT+AGG 0.572641 7_2:-43621748 None:intergenic
TGCTCTGGTTAATATGCCAA+AGG 0.574698 7_2:+43621010 Msa1058620:five_prime_UTR
ACTGCAGTTTAGACTTGAGA+GGG 0.577805 7_2:-43621653 None:intergenic
ACTGTCAAAAGAGAGTAGAA+AGG 0.578525 7_2:-43621796 None:intergenic
CTGAGTCCTACCATCATGAT+GGG 0.579403 7_2:+43621824 Msa1058620:CDS
CTACCATAAGCTATTTGTGA+AGG 0.580655 7_2:-43621865 None:intergenic
TCATGTGCTGATTATGTCCA+TGG 0.581990 7_2:+43621278 Msa1058620:five_prime_UTR
AACTGCAGTTTAGACTTGAG+AGG 0.584394 7_2:-43621654 None:intergenic
ATGGGTGTGCCATTGGTGCT+AGG 0.586769 7_2:+43623045 Msa1058620:CDS
ATGTTCCCATAACTATTGCT+GGG 0.588122 7_2:+43619320 Msa1058620:five_prime_UTR
GCATTTGTGTTATTTGCATG+AGG 0.589775 7_2:+43619947 Msa1058620:five_prime_UTR
GCTCACCAATTCGACTTGCA+AGG 0.592809 7_2:+43623013 Msa1058620:CDS
TGACACTATTATCTGCTCCA+TGG 0.594400 7_2:-43621295 None:intergenic
TGGCTTTATGCAGACACCGA+TGG 0.594724 7_2:+43619364 Msa1058620:five_prime_UTR
CTATTGTAGAGTAAGTCTGC+TGG 0.597296 7_2:-43621754 None:intergenic
GAACATAAAGAATTACAACT+TGG 0.599941 7_2:+43623396 Msa1058620:CDS
TTTCTTCTCTTCAAAGTGGG+AGG 0.601891 7_2:+43618044 None:intergenic
ATGAAAATGCACGCAAGATG+TGG 0.606205 7_2:+43620932 Msa1058620:five_prime_UTR
ATCCTGACACATGGTAGTGT+TGG 0.606226 7_2:+43623495 Msa1058620:CDS
CCCCGCTCAAAATTAACTGA+GGG 0.606816 7_2:-43618958 None:intergenic
TGACTTCAATAGAGAGCTTG+GGG 0.607068 7_2:+43622188 Msa1058620:CDS
TTCCTCGAAGAGAAAGGCAA+TGG 0.608108 7_2:+43619088 Msa1058620:five_prime_UTR
TGGGACAAGGATCGGTGATG+GGG 0.608225 7_2:+43619339 Msa1058620:five_prime_UTR
CTATGTGGAAATAAGAGACA+AGG 0.609661 7_2:-43619842 None:intergenic
TGCTGTTGAAGATGATGTTG+AGG 0.611368 7_2:+43623587 Msa1058620:CDS
AGAGTGCTCGTTGTGGATGG+GGG 0.612554 7_2:+43619112 Msa1058620:five_prime_UTR
GGTGTTTGAAGACAATGTCC+TGG 0.615251 7_2:+43619057 Msa1058620:five_prime_UTR
AGGGTTCGCATCACACACTT+CGG 0.620165 7_2:-43618939 None:intergenic
AAGCATATACGTGTTCCAGT+TGG 0.623868 7_2:+43622123 Msa1058620:CDS
GCTGAGATTCCTAGCACCAA+TGG 0.626325 7_2:-43623054 None:intergenic
ATTGTGTGCTGAGAGTGACT+TGG 0.628900 7_2:+43620594 Msa1058620:five_prime_UTR
GACTCTGAATCAGTGTGCAT+AGG 0.629022 7_2:+43623609 Msa1058620:CDS
AGTCAGATTCAGGCATCAAG+AGG 0.629541 7_2:-43622170 None:intergenic
AGAGATGTGGATGAGATCAA+TGG 0.633740 7_2:+43619226 Msa1058620:five_prime_UTR
GATCAATGGTTGTGATATTG+GGG 0.635484 7_2:+43619240 Msa1058620:five_prime_UTR
TCGAGAGATCAGAATTCCAT+CGG 0.636216 7_2:-43619380 None:intergenic
AAGTGGTGCCTAAACCATGA+TGG 0.640120 7_2:-43620721 None:intergenic
GTAGTGCAAGCACAGAACAA+TGG 0.640217 7_2:+43619172 Msa1058620:five_prime_UTR
TCCCCGCTCAAAATTAACTG+AGG 0.641261 7_2:-43618959 None:intergenic
GCAAGCACAGAACAATGGAT+GGG 0.641265 7_2:+43619177 Msa1058620:five_prime_UTR
CTTGCAAGGACAGTTATGAT+GGG 0.641602 7_2:+43623027 Msa1058620:CDS
TGCAACCATTAACACAATTG+CGG 0.644705 7_2:-43619653 None:intergenic
AGCATCGTAAGGATTTCTGA+TGG 0.645920 7_2:+43619866 Msa1058620:five_prime_UTR
AGACTTACTCTACAATAGCA+TGG 0.646847 7_2:+43621759 Msa1058620:CDS
GGTGGAGTTAGTGCTGCTTG+GGG 0.648347 7_2:+43622087 Msa1058620:CDS
TTGCCACATTCTTTACCACA+GGG 0.648572 7_2:-43620171 None:intergenic
AGCTGCACAACCGACAACAA+TGG 0.651161 7_2:-43620371 None:intergenic
AGAAGCCAGAATCAGAACAA+AGG 0.655880 7_2:-43621953 None:intergenic
GAATGGATGTATAAGAGATG+TGG 0.656133 7_2:+43619213 Msa1058620:five_prime_UTR
AGAACAAGACCAAGATGCCG+TGG 0.657174 7_2:-43621543 None:intergenic
ATGCCCCATTACGATTTACA+GGG 0.659241 7_2:+43620290 Msa1058620:five_prime_UTR
GTCAGATTCAGGCATCAAGA+GGG 0.661021 7_2:-43622169 None:intergenic
TGTAAGATAATTTCGCGTCG+CGG 0.665003 7_2:-43620108 None:intergenic
TGTAGAAATATTGAGGCACA+AGG 0.666582 7_2:+43623095 Msa1058620:CDS
TGGCCCTGTGGTAAAGAATG+TGG 0.666786 7_2:+43620168 Msa1058620:five_prime_UTR
CAATGGAAGAGTGCTCGTTG+TGG 0.668797 7_2:+43619105 Msa1058620:five_prime_UTR
TGTGCCAGAAAATATTGGCG+AGG 0.672710 7_2:+43623518 Msa1058620:CDS
GTAGAAAGGGGAAAAGACAG+AGG 0.673099 7_2:-43621782 None:intergenic
CTTAACTATCCATCTCCATG+GGG 0.676760 7_2:+43621698 Msa1058620:exon
CTACCCTGTAAATCGTAATG+GGG 0.677628 7_2:-43620293 None:intergenic
CTTAGAGTGAATTAGAGGTG+AGG 0.686484 7_2:+43619925 Msa1058620:five_prime_UTR
AGAAAGACTATCCTGACACA+TGG 0.690517 7_2:+43623486 Msa1058620:CDS
TGATGACATGAAGCATGTGA+TGG 0.697596 7_2:-43620651 None:intergenic
CCATTAACACAATTGCGGAG+AGG 0.698873 7_2:-43619648 None:intergenic
TGTCAAAAGAGAGTAGAAAG+GGG 0.699529 7_2:-43621794 None:intergenic
TTGCGCTGTGCAATATTGGG+TGG 0.699986 7_2:+43619142 Msa1058620:five_prime_UTR
TTAACTATCCATCTCCATGG+GGG 0.731886 7_2:+43621699 Msa1058620:exon
CGGGAAGATAGACTTTACAG+AGG 0.740426 7_2:-43620088 None:intergenic
TGTGTGACAAGAAAGATGAG+TGG 0.759207 7_2:-43623330 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTACTTTTTTTTGAAA+TGG + chr7_2:43620439-43620458 Msa1058620:five_prime_UTR 10.0%
!!! CTATTTTTTTTTTTTATGAA+AGG + chr7_2:43621361-43621380 Msa1058620:five_prime_UTR 10.0%
!! TGAATAATATATAGAAGAAA+AGG - chr7_2:43618350-43618369 None:intergenic 15.0%
!! TTCTATTATAAATAAAAACC+AGG + chr7_2:43618622-43618641 Msa1058620:intron 15.0%
!! ACCATCATTTATTAAAATAT+GGG - chr7_2:43619724-43619743 None:intergenic 15.0%
!! TACCATCATTTATTAAAATA+TGG - chr7_2:43619725-43619744 None:intergenic 15.0%
!!! TACTATTTTTATATACTTGT+GGG + chr7_2:43620469-43620488 Msa1058620:five_prime_UTR 15.0%
!! TTTCATATATTTCTTATGAA+TGG - chr7_2:43620535-43620554 None:intergenic 15.0%
!! ATAAAAAAAAATGAATCTGA+TGG + chr7_2:43621200-43621219 Msa1058620:five_prime_UTR 15.0%
!! TAAAAAAAAATGAATCTGAT+GGG + chr7_2:43621201-43621220 Msa1058620:five_prime_UTR 15.0%
!!! TATAATAAGTTTCCTTTTTT+AGG + chr7_2:43622389-43622408 Msa1058620:intron 15.0%
!!! ATAATAAGTTTCCTTTTTTA+GGG + chr7_2:43622390-43622409 Msa1058620:intron 15.0%
!!! TTTTCTTTGAAATTTTCATT+CGG + chr7_2:43622415-43622434 Msa1058620:intron 15.0%
!! AATTATTGTTTGTCATTAAT+TGG + chr7_2:43622508-43622527 Msa1058620:intron 15.0%
!! TTGTATAATAATATGATCAA+TGG + chr7_2:43623697-43623716 Msa1058620:three_prime_UTR 15.0%
!! AGTAGTTAGAAATTGTAAAA+TGG - chr7_2:43618304-43618323 None:intergenic 20.0%
!!! TTACATATAGGAAAAGTATA+TGG - chr7_2:43618419-43618438 None:intergenic 20.0%
!! ATAAACTCAATCAATTTGAT+TGG - chr7_2:43618493-43618512 None:intergenic 20.0%
!!! CTTAATAAAGACATTTTCAT+AGG - chr7_2:43618525-43618544 None:intergenic 20.0%
!!! TTTTCGTATATTTTTCCTAT+GGG + chr7_2:43618791-43618810 Msa1058620:intron 20.0%
!!! CTGAAATTGTTTTTTATTTG+TGG + chr7_2:43618874-43618893 Msa1058620:intron 20.0%
!! TTGATTTCAATTCATATGTA+AGG + chr7_2:43619417-43619436 Msa1058620:five_prime_UTR 20.0%
!! AAGGCCTATATATTTATTAT+TGG + chr7_2:43619436-43619455 Msa1058620:five_prime_UTR 20.0%
!!! GTACTATTTTTATATACTTG+TGG + chr7_2:43620468-43620487 Msa1058620:five_prime_UTR 20.0%
!! ATATATTTCTTATGAATGGA+TGG - chr7_2:43620531-43620550 None:intergenic 20.0%
!! CATAAGAAATATATGAAATG+AGG + chr7_2:43620537-43620556 Msa1058620:five_prime_UTR 20.0%
!!! TCATCAAATATCTTGTATTT+TGG - chr7_2:43620862-43620881 None:intergenic 20.0%
!! AAAAAAAAATGAATCTGATG+GGG + chr7_2:43621202-43621221 Msa1058620:five_prime_UTR 20.0%
!! TGATTAGATATATCTTTACT+GGG - chr7_2:43621457-43621476 None:intergenic 20.0%
!! TTGATTAGATATATCTTTAC+TGG - chr7_2:43621458-43621477 None:intergenic 20.0%
!! ATAAAGAAAAAGCAAGTAAA+TGG - chr7_2:43622613-43622632 None:intergenic 20.0%
!! AACTAATTGAAGTTAGAATT+TGG + chr7_2:43622728-43622747 Msa1058620:intron 20.0%
!!! TTGTTTTAAATTGTGTAACA+AGG + chr7_2:43622803-43622822 Msa1058620:intron 20.0%
!! AAATCAATGTAGAAATATTG+AGG + chr7_2:43623088-43623107 Msa1058620:CDS 20.0%
!!! ATATTTAGTTGCTTTGAAAA+TGG + chr7_2:43623641-43623660 Msa1058620:three_prime_UTR 20.0%
! TCTGCAAATTTGAATGAAAA+TGG - chr7_2:43618210-43618229 None:intergenic 25.0%
! ATAAGAGATATAAATACCGA+TGG - chr7_2:43618246-43618265 None:intergenic 25.0%
!! ACTAGCTTACATTTACATAT+AGG - chr7_2:43618431-43618450 None:intergenic 25.0%
!! CTTTTCGTATATTTTTCCTA+TGG + chr7_2:43618790-43618809 Msa1058620:intron 25.0%
! AATCTGAAAAATTGGTTGAA+GGG - chr7_2:43618993-43619012 None:intergenic 25.0%
! AAATCTGAAAAATTGGTTGA+AGG - chr7_2:43618994-43619013 None:intergenic 25.0%
!!! CAACCAATTTTTCAGATTTA+TGG + chr7_2:43618995-43619014 Msa1058620:five_prime_UTR 25.0%
! CCTGCCAATAATAAATATAT+AGG - chr7_2:43619443-43619462 None:intergenic 25.0%
! CCTATATATTTATTATTGGC+AGG + chr7_2:43619440-43619459 Msa1058620:five_prime_UTR 25.0%
! ATTCAAAACAGAGATTAAGT+TGG - chr7_2:43619595-43619614 None:intergenic 25.0%
!!! GCCCATATTTTAATAAATGA+TGG + chr7_2:43619720-43619739 Msa1058620:five_prime_UTR 25.0%
! AAACTAAATGAAGGAAAGAT+CGG + chr7_2:43619783-43619802 Msa1058620:five_prime_UTR 25.0%
! ATATTACTAAAAAGTTGCAG+TGG + chr7_2:43620130-43620149 Msa1058620:five_prime_UTR 25.0%
! TATTACTAAAAAGTTGCAGT+GGG + chr7_2:43620131-43620150 Msa1058620:five_prime_UTR 25.0%
!!! CTCTTAGGTTTTGTTTAAAA+GGG + chr7_2:43620769-43620788 Msa1058620:five_prime_UTR 25.0%
!! GTAAATGGAATTGTTGATAA+GGG + chr7_2:43620954-43620973 Msa1058620:five_prime_UTR 25.0%
! AACATATTGATATACTTGCA+TGG - chr7_2:43621495-43621514 None:intergenic 25.0%
!!! ATAGTTTTGCTTAAGAAACT+GGG + chr7_2:43621889-43621908 Msa1058620:CDS 25.0%
! AAACTTTCATTAACAATGAC+AGG - chr7_2:43622018-43622037 None:intergenic 25.0%
! TTAAATGAAAATACAGCTGT+AGG - chr7_2:43622066-43622085 None:intergenic 25.0%
!! ACAGCTGTATTTTCATTTAA+TGG + chr7_2:43622066-43622085 Msa1058620:CDS 25.0%
!!! TACATATGTTTTAGATTCCT+TGG + chr7_2:43622455-43622474 Msa1058620:intron 25.0%
! ATTGTTTGTCATTAATTGGT+AGG + chr7_2:43622512-43622531 Msa1058620:intron 25.0%
!! GTAAAATTGATTCTAAGCAA+AGG + chr7_2:43622651-43622670 Msa1058620:intron 25.0%
! GAATGTAAAAGTGATTATGT+TGG + chr7_2:43622680-43622699 Msa1058620:intron 25.0%
!! AATTGATTCATCAATTCTAG+AGG - chr7_2:43622762-43622781 None:intergenic 25.0%
!! TCTAGAATTGATGAATCAAT+TGG + chr7_2:43622761-43622780 Msa1058620:intron 25.0%
! ACAAATCTTATTAACTCTTC+AGG - chr7_2:43622910-43622929 None:intergenic 25.0%
! ATGGGAGTTTATAACAATTT+CGG - chr7_2:43623202-43623221 None:intergenic 25.0%
! GAACATAAAGAATTACAACT+TGG + chr7_2:43623396-43623415 Msa1058620:CDS 25.0%
!!! AATGGTTGATAAATTGCTTT+TGG + chr7_2:43623659-43623678 Msa1058620:three_prime_UTR 25.0%
!! ACTTTATTTACCATAGATAC+AGG - chr7_2:43623751-43623770 None:intergenic 25.0%
AGACTCTTTCAAAATCTGTT+CGG + chr7_2:43618138-43618157 Msa1058620:five_prime_UTR 30.0%
CTATGATAGAATTAACGTCA+CGG - chr7_2:43618377-43618396 None:intergenic 30.0%
AAAGAAATCAAGAAACCCAT+AGG - chr7_2:43618809-43618828 None:intergenic 30.0%
!!! TTTTTTATTTGTGGTGTTGC+AGG + chr7_2:43618883-43618902 Msa1058620:intron 30.0%
CGACCATAAATCTGAAAAAT+TGG - chr7_2:43619001-43619020 None:intergenic 30.0%
AGATCAATGGTTGTGATATT+GGG + chr7_2:43619239-43619258 Msa1058620:five_prime_UTR 30.0%
! AAAGCCAATAAGAAAGGTAT+GGG + chr7_2:43619289-43619308 Msa1058620:five_prime_UTR 30.0%
CCAAACTACTTTCATTATCA+TGG - chr7_2:43619553-43619572 None:intergenic 30.0%
! CCATGATAATGAAAGTAGTT+TGG + chr7_2:43619550-43619569 Msa1058620:five_prime_UTR 30.0%
!! GAGATTAAGTTGGTGTAAAA+TGG - chr7_2:43619585-43619604 None:intergenic 30.0%
! GCATGTATGTATTTTGCATT+TGG - chr7_2:43619702-43619721 None:intergenic 30.0%
GTATCAGTGCGTTATAAATT+TGG + chr7_2:43619805-43619824 Msa1058620:five_prime_UTR 30.0%
AGTGCGTTATAAATTTGGTA+TGG + chr7_2:43619810-43619829 Msa1058620:five_prime_UTR 30.0%
TATAGTAATGAAGCTGAAAC+GGG - chr7_2:43619983-43620002 None:intergenic 30.0%
GTATAGTAATGAAGCTGAAA+CGG - chr7_2:43619984-43620003 None:intergenic 30.0%
ATTACTAAAAAGTTGCAGTG+GGG + chr7_2:43620132-43620151 Msa1058620:five_prime_UTR 30.0%
CAAAAGTAGTTAGACTTAAG+AGG - chr7_2:43620207-43620226 None:intergenic 30.0%
! CTCTTAAGTCTAACTACTTT+TGG + chr7_2:43620205-43620224 Msa1058620:five_prime_UTR 30.0%
!! TCAAAACTGACTACTTTTGA+AGG + chr7_2:43620344-43620363 Msa1058620:five_prime_UTR 30.0%
!! CAAAACTGACTACTTTTGAA+GGG + chr7_2:43620345-43620364 Msa1058620:five_prime_UTR 30.0%
AATAGTACAGTATGAGAATC+AGG - chr7_2:43620422-43620441 None:intergenic 30.0%
TGGATCAATGTTTCTTCTAA+TGG + chr7_2:43620614-43620633 Msa1058620:five_prime_UTR 30.0%
!!! GAAACTTTTTTGTACCATCA+TGG + chr7_2:43620707-43620726 Msa1058620:five_prime_UTR 30.0%
! TTTTTGTACCATCATGGTTT+AGG + chr7_2:43620713-43620732 Msa1058620:five_prime_UTR 30.0%
! AGGACAATACTTTAGAAAAG+TGG - chr7_2:43620741-43620760 None:intergenic 30.0%
AAAACCTAAGAGCTCATATA+AGG - chr7_2:43620761-43620780 None:intergenic 30.0%
!!! GCTCTTAGGTTTTGTTTAAA+AGG + chr7_2:43620768-43620787 Msa1058620:five_prime_UTR 30.0%
!! TTTTTAGCCTGAGACTTTTT+TGG + chr7_2:43620832-43620851 Msa1058620:five_prime_UTR 30.0%
GGTAAATGGAATTGTTGATA+AGG + chr7_2:43620953-43620972 Msa1058620:five_prime_UTR 30.0%
! AAGAGCTTTTAATCATATGC+AGG + chr7_2:43621167-43621186 Msa1058620:five_prime_UTR 30.0%
! GCAAAACAAATGAGTCTTTT+TGG - chr7_2:43621729-43621748 None:intergenic 30.0%
!! CATAGTTTTGCTTAAGAAAC+TGG + chr7_2:43621888-43621907 Msa1058620:CDS 30.0%
! GCTGTATTTTCATTTAATGG+TGG + chr7_2:43622069-43622088 Msa1058620:CDS 30.0%
ATGAAATCTGAGAGACAAAA+AGG - chr7_2:43622227-43622246 None:intergenic 30.0%
TCATTCTATTGGCACTAAAT+TGG - chr7_2:43622295-43622314 None:intergenic 30.0%
! TTGTTGGCATTTTCTTTAAC+AGG - chr7_2:43622348-43622367 None:intergenic 30.0%
AAGAAAATGCCAACAACTAT+AGG + chr7_2:43622352-43622371 Msa1058620:intron 30.0%
AGAAAATGCCAACAACTATA+GGG + chr7_2:43622353-43622372 Msa1058620:intron 30.0%
CAAAGAAAACTCCCTAAAAA+AGG - chr7_2:43622404-43622423 None:intergenic 30.0%
!!! CTTTGAAATTTTCATTCGGA+TGG + chr7_2:43622419-43622438 Msa1058620:intron 30.0%
TTATAAACTCCCATTTACCT+TGG + chr7_2:43623208-43623227 Msa1058620:CDS 30.0%
TATAAACTCCCATTTACCTT+GGG + chr7_2:43623209-43623228 Msa1058620:CDS 30.0%
CTAAAGAGTTAATTCGGAAT+TGG + chr7_2:43623232-43623251 Msa1058620:CDS 30.0%
TGCTTCTCTTATATTGTTAC+AGG + chr7_2:43623307-43623326 Msa1058620:CDS 30.0%
! AAGATACTTTTAGTGAGCAA+AGG + chr7_2:43623352-43623371 Msa1058620:CDS 30.0%
! AGATACTTTTAGTGAGCAAA+GGG + chr7_2:43623353-43623372 Msa1058620:CDS 30.0%
TTACAACTTGGAGAATTATC+AGG + chr7_2:43623408-43623427 Msa1058620:CDS 30.0%
!! GAACAGATTTTGAAAGAGTC+TGG - chr7_2:43618139-43618158 None:intergenic 35.0%
TTTCAAAATCTGTTCGGACT+CGG + chr7_2:43618144-43618163 Msa1058620:five_prime_UTR 35.0%
! AGATCCATTTTCTCATCCAT+CGG + chr7_2:43618227-43618246 Msa1058620:five_prime_UTR 35.0%
AATACCGATGGATGAGAAAA+TGG - chr7_2:43618234-43618253 None:intergenic 35.0%
GCAGGTTCCTTGAAATAAAA+TGG + chr7_2:43618901-43618920 Msa1058620:intron 35.0%
TCCTTGAAATAAAATGGCTC+TGG + chr7_2:43618907-43618926 Msa1058620:five_prime_UTR 35.0%
!! ACCAGAGCCATTTTATTTCA+AGG - chr7_2:43618911-43618930 None:intergenic 35.0%
! AACCCTCAGTTAATTTTGAG+CGG + chr7_2:43618956-43618975 Msa1058620:five_prime_UTR 35.0%
AACACCTTCAACGTAACTAT+AGG - chr7_2:43619043-43619062 None:intergenic 35.0%
GAATGGATGTATAAGAGATG+TGG + chr7_2:43619213-43619232 Msa1058620:five_prime_UTR 35.0%
GAGATCAATGGTTGTGATAT+TGG + chr7_2:43619238-43619257 Msa1058620:five_prime_UTR 35.0%
GATCAATGGTTGTGATATTG+GGG + chr7_2:43619240-43619259 Msa1058620:five_prime_UTR 35.0%
!! CCTTTCTTATTGGCTTTCAT+GGG - chr7_2:43619286-43619305 None:intergenic 35.0%
!! ACCTTTCTTATTGGCTTTCA+TGG - chr7_2:43619287-43619306 None:intergenic 35.0%
GAAAGCCAATAAGAAAGGTA+TGG + chr7_2:43619288-43619307 Msa1058620:five_prime_UTR 35.0%
TTCTCCCATACCTTTCTTAT+TGG - chr7_2:43619296-43619315 None:intergenic 35.0%
ATGTTCCCATAACTATTGCT+GGG + chr7_2:43619320-43619339 Msa1058620:five_prime_UTR 35.0%
TGCAACCATTAACACAATTG+CGG - chr7_2:43619656-43619675 None:intergenic 35.0%
GTTGCATCTGTTACTATGTT+TGG + chr7_2:43619670-43619689 Msa1058620:five_prime_UTR 35.0%
TAGACTGCAACATCATTCTA+CGG - chr7_2:43619762-43619781 None:intergenic 35.0%
GCAGTCTAGAAACTAAATGA+AGG + chr7_2:43619774-43619793 Msa1058620:five_prime_UTR 35.0%
CTATGTGGAAATAAGAGACA+AGG - chr7_2:43619845-43619864 None:intergenic 35.0%
!! GCATTTGTGTTATTTGCATG+AGG + chr7_2:43619947-43619966 Msa1058620:five_prime_UTR 35.0%
! TGTTATTTGCATGAGGTTGT+AGG + chr7_2:43619954-43619973 Msa1058620:five_prime_UTR 35.0%
TTACTAAAAAGTTGCAGTGG+GGG + chr7_2:43620133-43620152 Msa1058620:five_prime_UTR 35.0%
!! AGTCTAACTACTTTTGGACA+TGG + chr7_2:43620211-43620230 Msa1058620:five_prime_UTR 35.0%
!! ACTACTTTTGGACATGGAAT+AGG + chr7_2:43620217-43620236 Msa1058620:five_prime_UTR 35.0%
! TTTTGGACATGGAATAGGAA+AGG + chr7_2:43620222-43620241 Msa1058620:five_prime_UTR 35.0%
TCTACCCTGTAAATCGTAAT+GGG - chr7_2:43620297-43620316 None:intergenic 35.0%
TTCTACCCTGTAAATCGTAA+TGG - chr7_2:43620298-43620317 None:intergenic 35.0%
CATGTCATCATCACAACTAT+TGG + chr7_2:43620664-43620683 Msa1058620:five_prime_UTR 35.0%
TTGTCCTTATATGAGCTCTT+AGG + chr7_2:43620754-43620773 Msa1058620:five_prime_UTR 35.0%
!! TCACTTTTCTCAACCCATTA+GGG - chr7_2:43620797-43620816 None:intergenic 35.0%
!! TTCACTTTTCTCAACCCATT+AGG - chr7_2:43620798-43620817 None:intergenic 35.0%
! CAGAGCATTAACATCAATCA+AGG - chr7_2:43620997-43621016 None:intergenic 35.0%
CTTGATTGATGTTAATGCTC+TGG + chr7_2:43620995-43621014 Msa1058620:five_prime_UTR 35.0%
! GACAATGATAAGAGTGTGTT+AGG + chr7_2:43621050-43621069 Msa1058620:five_prime_UTR 35.0%
! GATAAGAGTGTGTTAGGATT+TGG + chr7_2:43621056-43621075 Msa1058620:five_prime_UTR 35.0%
! TAGGATTTGGCGACAATTTT+TGG + chr7_2:43621069-43621088 Msa1058620:five_prime_UTR 35.0%
!!! ACAATTTTTGGTGTGGTTTG+TGG + chr7_2:43621081-43621100 Msa1058620:five_prime_UTR 35.0%
AGAGATCAATCACAACAGTT+TGG - chr7_2:43621128-43621147 None:intergenic 35.0%
CTCTTCTCTTCTAACATTTC+AGG - chr7_2:43621152-43621171 None:intergenic 35.0%
!!! TGTTGAGTTTTGGGCTTTTT+TGG - chr7_2:43621393-43621412 None:intergenic 35.0%
AACTTAACTATCCATCTCCA+TGG + chr7_2:43621696-43621715 Msa1058620:exon 35.0%
ACTTAACTATCCATCTCCAT+GGG + chr7_2:43621697-43621716 Msa1058620:exon 35.0%
AGACTTACTCTACAATAGCA+TGG + chr7_2:43621759-43621778 Msa1058620:CDS 35.0%
TGTCAAAAGAGAGTAGAAAG+GGG - chr7_2:43621797-43621816 None:intergenic 35.0%
CTGTCAAAAGAGAGTAGAAA+GGG - chr7_2:43621798-43621817 None:intergenic 35.0%
ACTGTCAAAAGAGAGTAGAA+AGG - chr7_2:43621799-43621818 None:intergenic 35.0%
CTACCATAAGCTATTTGTGA+AGG - chr7_2:43621868-43621887 None:intergenic 35.0%
TCTCTATTGAAGTCAGATTC+AGG - chr7_2:43622183-43622202 None:intergenic 35.0%
TACACATGTGAGTTGTGATA+TGG + chr7_2:43622252-43622271 Msa1058620:intron 35.0%
TTTAGTGCCAATAGAATGAG+AGG + chr7_2:43622296-43622315 Msa1058620:intron 35.0%
AACATCTTCCCTATAGTTGT+TGG - chr7_2:43622364-43622383 None:intergenic 35.0%
TCACATTTCCGTTTACTGAT+AGG - chr7_2:43622954-43622973 None:intergenic 35.0%
TGTAGAAATATTGAGGCACA+AGG + chr7_2:43623095-43623114 Msa1058620:CDS 35.0%
CTTGGGCTAAAGAGTTAATT+CGG + chr7_2:43623226-43623245 Msa1058620:CDS 35.0%
AGTTAATTCGGAATTGGAAG+TGG + chr7_2:43623238-43623257 Msa1058620:CDS 35.0%
! GAAGTGGACTTTCTATGTTT+GGG + chr7_2:43623254-43623273 Msa1058620:CDS 35.0%
TTTCTGAGTTGTTGAGGAAA+TGG + chr7_2:43623445-43623464 Msa1058620:CDS 35.0%
AATCAGTGTGCATAGGTTAA+AGG + chr7_2:43623616-43623635 Msa1058620:CDS 35.0%
ATCAGTGTGCATAGGTTAAA+GGG + chr7_2:43623617-43623636 Msa1058620:exon 35.0%
ACGAGAAGCTATTGTATTGC+AGG + chr7_2:43618764-43618783 Msa1058620:intron 40.0%
! ACCCTCAGTTAATTTTGAGC+GGG + chr7_2:43618957-43618976 Msa1058620:five_prime_UTR 40.0%
TCAGATTTATGGTCGAAGAC+AGG + chr7_2:43619006-43619025 Msa1058620:five_prime_UTR 40.0%
CTTCAACGTAACTATAGGTC+CGG - chr7_2:43619038-43619057 None:intergenic 40.0%
TTGAAGACAATGTCCTGGTT+CGG + chr7_2:43619062-43619081 Msa1058620:five_prime_UTR 40.0%
AGTTTGCGCTGTGCAATATT+GGG + chr7_2:43619139-43619158 Msa1058620:five_prime_UTR 40.0%
AGAGATGTGGATGAGATCAA+TGG + chr7_2:43619226-43619245 Msa1058620:five_prime_UTR 40.0%
CCCATGAAAGCCAATAAGAA+AGG + chr7_2:43619283-43619302 Msa1058620:five_prime_UTR 40.0%
CATGTTCCCATAACTATTGC+TGG + chr7_2:43619319-43619338 Msa1058620:five_prime_UTR 40.0%
CTTGTCCCAGCAATAGTTAT+GGG - chr7_2:43619328-43619347 None:intergenic 40.0%
TCGAGAGATCAGAATTCCAT+CGG - chr7_2:43619383-43619402 None:intergenic 40.0%
TTGTGGAAGCTAGGAAACTA+GGG - chr7_2:43619510-43619529 None:intergenic 40.0%
TTTGTGGAAGCTAGGAAACT+AGG - chr7_2:43619511-43619530 None:intergenic 40.0%
! GTTGCAATTTTGTGGAAGCT+AGG - chr7_2:43619519-43619538 None:intergenic 40.0%
!! CTGATAGCGTTGCAATTTTG+TGG - chr7_2:43619527-43619546 None:intergenic 40.0%
CATTAACACAATTGCGGAGA+GGG - chr7_2:43619650-43619669 None:intergenic 40.0%
AGCATCGTAAGGATTTCTGA+TGG + chr7_2:43619866-43619885 Msa1058620:five_prime_UTR 40.0%
AGCCTCTTAGAGTGAATTAG+AGG + chr7_2:43619920-43619939 Msa1058620:five_prime_UTR 40.0%
CACCTCTAATTCACTCTAAG+AGG - chr7_2:43619925-43619944 None:intergenic 40.0%
CTTAGAGTGAATTAGAGGTG+AGG + chr7_2:43619925-43619944 Msa1058620:five_prime_UTR 40.0%
TGTAAGATAATTTCGCGTCG+CGG - chr7_2:43620111-43620130 None:intergenic 40.0%
TACTAAAAAGTTGCAGTGGG+GGG + chr7_2:43620134-43620153 Msa1058620:five_prime_UTR 40.0%
TTGCCACATTCTTTACCACA+GGG - chr7_2:43620174-43620193 None:intergenic 40.0%
TATGCCCCATTACGATTTAC+AGG + chr7_2:43620289-43620308 Msa1058620:five_prime_UTR 40.0%
ATGCCCCATTACGATTTACA+GGG + chr7_2:43620290-43620309 Msa1058620:five_prime_UTR 40.0%
CTACCCTGTAAATCGTAATG+GGG - chr7_2:43620296-43620315 None:intergenic 40.0%
! AGGTGTCACAATCATGTTGA+AGG + chr7_2:43620557-43620576 Msa1058620:five_prime_UTR 40.0%
TGATGACATGAAGCATGTGA+TGG - chr7_2:43620654-43620673 None:intergenic 40.0%
!! TGTTTAAAAGGGCACCCTAA+TGG + chr7_2:43620780-43620799 Msa1058620:five_prime_UTR 40.0%
!! GTTTAAAAGGGCACCCTAAT+GGG + chr7_2:43620781-43620800 Msa1058620:five_prime_UTR 40.0%
TGGTACACCAAAAAAGTCTC+AGG - chr7_2:43620842-43620861 None:intergenic 40.0%
! ATCACAGCAAGTTCTAGTGA+TGG - chr7_2:43620914-43620933 None:intergenic 40.0%
ATGAAAATGCACGCAAGATG+TGG + chr7_2:43620932-43620951 Msa1058620:five_prime_UTR 40.0%
TGCTCTGGTTAATATGCCAA+AGG + chr7_2:43621010-43621029 Msa1058620:five_prime_UTR 40.0%
TCAGCTTAAAGAGAGTCCTT+TGG - chr7_2:43621029-43621048 None:intergenic 40.0%
!!! TTTGGCGACAATTTTTGGTG+TGG + chr7_2:43621074-43621093 Msa1058620:five_prime_UTR 40.0%
! TGATGGGGCACTATAATTTC+AGG + chr7_2:43621217-43621236 Msa1058620:five_prime_UTR 40.0%
!! TCATGTGCTGATTATGTCCA+TGG + chr7_2:43621278-43621297 Msa1058620:five_prime_UTR 40.0%
TGACACTATTATCTGCTCCA+TGG - chr7_2:43621298-43621317 None:intergenic 40.0%
CATTCATCTTGCAGCTTCAA+TGG + chr7_2:43621316-43621335 Msa1058620:five_prime_UTR 40.0%
! GGGCTTCAATGTTGAGTTTT+GGG - chr7_2:43621402-43621421 None:intergenic 40.0%
! TGGGCTTCAATGTTGAGTTT+TGG - chr7_2:43621403-43621422 None:intergenic 40.0%
TGCAAATTGCCAATTTGCCA+CGG + chr7_2:43621526-43621545 Msa1058620:five_prime_UTR 40.0%
ACTGCAGTTTAGACTTGAGA+GGG - chr7_2:43621656-43621675 None:intergenic 40.0%
AACTGCAGTTTAGACTTGAG+AGG - chr7_2:43621657-43621676 None:intergenic 40.0%
CTTAACTATCCATCTCCATG+GGG + chr7_2:43621698-43621717 Msa1058620:exon 40.0%
TTAACTATCCATCTCCATGG+GGG + chr7_2:43621699-43621718 Msa1058620:exon 40.0%
CTATTGTAGAGTAAGTCTGC+TGG - chr7_2:43621757-43621776 None:intergenic 40.0%
!! TTGTGAAGGAGCATTGTCTT+TGG - chr7_2:43621854-43621873 None:intergenic 40.0%
GCTCCTTCACAAATAGCTTA+TGG + chr7_2:43621862-43621881 Msa1058620:CDS 40.0%
TCTGTCCTTTGTTCTGATTC+TGG + chr7_2:43621948-43621967 Msa1058620:CDS 40.0%
AGAAGCCAGAATCAGAACAA+AGG - chr7_2:43621956-43621975 None:intergenic 40.0%
AAGCATATACGTGTTCCAGT+TGG + chr7_2:43622123-43622142 Msa1058620:CDS 40.0%
ACAGAAAATGTGTGACCAAC+TGG - chr7_2:43622141-43622160 None:intergenic 40.0%
TCTGACTTCAATAGAGAGCT+TGG + chr7_2:43622186-43622205 Msa1058620:CDS 40.0%
CTGACTTCAATAGAGAGCTT+GGG + chr7_2:43622187-43622206 Msa1058620:CDS 40.0%
TGACTTCAATAGAGAGCTTG+GGG + chr7_2:43622188-43622207 Msa1058620:CDS 40.0%
GCATTCTCCTCTCATTCTAT+TGG - chr7_2:43622306-43622325 None:intergenic 40.0%
CATGAAATCAAGCATGTCCA+AGG - chr7_2:43622475-43622494 None:intergenic 40.0%
GGAGGTAATTATCAGCATTC+AGG - chr7_2:43622539-43622558 None:intergenic 40.0%
GCAGAACTCCTATCAGTAAA+CGG + chr7_2:43622943-43622962 Msa1058620:CDS 40.0%
CAGGGTTACTCTTATAGCAT+TGG - chr7_2:43623136-43623155 None:intergenic 40.0%
ATTTCGGCTTCGTATAGTTG+TGG - chr7_2:43623186-43623205 None:intergenic 40.0%
CTCTTTAGCCCAAGGTAAAT+GGG - chr7_2:43623220-43623239 None:intergenic 40.0%
ACTCTTTAGCCCAAGGTAAA+TGG - chr7_2:43623221-43623240 None:intergenic 40.0%
CGAATTAACTCTTTAGCCCA+AGG - chr7_2:43623228-43623247 None:intergenic 40.0%
! GGAAGTGGACTTTCTATGTT+TGG + chr7_2:43623253-43623272 Msa1058620:CDS 40.0%
TGTGTGACAAGAAAGATGAG+TGG - chr7_2:43623333-43623352 None:intergenic 40.0%
! TTTTAGTGAGCAAAGGGTGA+GGG + chr7_2:43623359-43623378 Msa1058620:CDS 40.0%
ATTATCAGGAGATGAGAGTG+AGG + chr7_2:43623422-43623441 Msa1058620:CDS 40.0%
AGAAAGACTATCCTGACACA+TGG + chr7_2:43623486-43623505 Msa1058620:CDS 40.0%
GTTGGTGTGCCAGAAAATAT+TGG + chr7_2:43623513-43623532 Msa1058620:CDS 40.0%
AGTAGTCGTCATGCTAATAC+TGG - chr7_2:43623547-43623566 None:intergenic 40.0%
ATCATCTTCAACAGCAACAC+TGG - chr7_2:43623583-43623602 None:intergenic 40.0%
TGCTGTTGAAGATGATGTTG+AGG + chr7_2:43623587-43623606 Msa1058620:CDS 40.0%
CCCCGCTCAAAATTAACTGA+GGG - chr7_2:43618961-43618980 None:intergenic 45.0%
! CCCTCAGTTAATTTTGAGCG+GGG + chr7_2:43618958-43618977 Msa1058620:five_prime_UTR 45.0%
TCCCCGCTCAAAATTAACTG+AGG - chr7_2:43618962-43618981 None:intergenic 45.0%
CGGACCTATAGTTACGTTGA+AGG + chr7_2:43619036-43619055 Msa1058620:five_prime_UTR 45.0%
GGTGTTTGAAGACAATGTCC+TGG + chr7_2:43619057-43619076 Msa1058620:five_prime_UTR 45.0%
TGAAGACAATGTCCTGGTTC+GGG + chr7_2:43619063-43619082 Msa1058620:five_prime_UTR 45.0%
TTCCTCGAAGAGAAAGGCAA+TGG + chr7_2:43619088-43619107 Msa1058620:five_prime_UTR 45.0%
TTCCATTGCCTTTCTCTTCG+AGG - chr7_2:43619093-43619112 None:intergenic 45.0%
CAATATTGCACAGCGCAAAC+TGG - chr7_2:43619140-43619159 None:intergenic 45.0%
CAGTTTGCGCTGTGCAATAT+TGG + chr7_2:43619138-43619157 Msa1058620:five_prime_UTR 45.0%
TTGTTCTGTGCTTGCACTAC+AGG - chr7_2:43619172-43619191 None:intergenic 45.0%
GTAGTGCAAGCACAGAACAA+TGG + chr7_2:43619172-43619191 Msa1058620:five_prime_UTR 45.0%
TGCAAGCACAGAACAATGGA+TGG + chr7_2:43619176-43619195 Msa1058620:five_prime_UTR 45.0%
GCAAGCACAGAACAATGGAT+GGG + chr7_2:43619177-43619196 Msa1058620:five_prime_UTR 45.0%
TGGGCAGGTATCATTGTGAA+TGG + chr7_2:43619196-43619215 Msa1058620:five_prime_UTR 45.0%
CCTTGTCCCAGCAATAGTTA+TGG - chr7_2:43619329-43619348 None:intergenic 45.0%
CCATAACTATTGCTGGGACA+AGG + chr7_2:43619326-43619345 Msa1058620:five_prime_UTR 45.0%
ACTATTGCTGGGACAAGGAT+CGG + chr7_2:43619331-43619350 Msa1058620:five_prime_UTR 45.0%
TTGGCAGGCAAGACATATCA+TGG + chr7_2:43619455-43619474 Msa1058620:five_prime_UTR 45.0%
CCATTAACACAATTGCGGAG+AGG - chr7_2:43619651-43619670 None:intergenic 45.0%
CCTCTCCGCAATTGTGTTAA+TGG + chr7_2:43619648-43619667 Msa1058620:five_prime_UTR 45.0%
TTCCACATAGCAGCATCGTA+AGG + chr7_2:43619855-43619874 Msa1058620:five_prime_UTR 45.0%
ATCCTTACGATGCTGCTATG+TGG - chr7_2:43619860-43619879 None:intergenic 45.0%
CGGGAAGATAGACTTTACAG+AGG - chr7_2:43620091-43620110 None:intergenic 45.0%
GTAAGATAATTTCGCGTCGC+GGG - chr7_2:43620110-43620129 None:intergenic 45.0%
ACTAAAAAGTTGCAGTGGGG+GGG + chr7_2:43620135-43620154 Msa1058620:five_prime_UTR 45.0%
GTTGCCACATTCTTTACCAC+AGG - chr7_2:43620175-43620194 None:intergenic 45.0%
ATTGTGTGCTGAGAGTGACT+TGG + chr7_2:43620594-43620613 Msa1058620:five_prime_UTR 45.0%
AAGTGGTGCCTAAACCATGA+TGG - chr7_2:43620724-43620743 None:intergenic 45.0%
TGCACGCAAGATGTGGTAAA+TGG + chr7_2:43620939-43620958 Msa1058620:five_prime_UTR 45.0%
!!! GCCAAGTTGGCTTTTTCTCT+GGG - chr7_2:43621422-43621441 None:intergenic 45.0%
!!! AGCCAAGTTGGCTTTTTCTC+TGG - chr7_2:43621423-43621442 None:intergenic 45.0%
!!! GTCTTTTTGGTTTTCCCCCA+TGG - chr7_2:43621716-43621735 None:intergenic 45.0%
TAGAGTAAGTCTGCTGGTGT+AGG - chr7_2:43621751-43621770 None:intergenic 45.0%
GTAGAAAGGGGAAAAGACAG+AGG - chr7_2:43621785-43621804 None:intergenic 45.0%
TCTGAGTCCTACCATCATGA+TGG + chr7_2:43621823-43621842 Msa1058620:CDS 45.0%
CTGAGTCCTACCATCATGAT+GGG + chr7_2:43621824-43621843 Msa1058620:CDS 45.0%
!! CTTTGGTTTGCCCATCATGA+TGG - chr7_2:43621837-43621856 None:intergenic 45.0%
!! TGTTCTGATTCTGGCTTCTG+TGG + chr7_2:43621957-43621976 Msa1058620:CDS 45.0%
!!! AGTTGGGTTGGTTCGGTTTT+GGG + chr7_2:43621984-43622003 Msa1058620:CDS 45.0%
GTCAGATTCAGGCATCAAGA+GGG - chr7_2:43622172-43622191 None:intergenic 45.0%
AGTCAGATTCAGGCATCAAG+AGG - chr7_2:43622173-43622192 None:intergenic 45.0%
TTTCATTCGGATGGACATGC+AGG + chr7_2:43622428-43622447 Msa1058620:intron 45.0%
ACCTCCTGAGTAATGTGTCA+AGG + chr7_2:43622553-43622572 Msa1058620:intron 45.0%
CCTCCTGAGTAATGTGTCAA+GGG + chr7_2:43622554-43622573 Msa1058620:intron 45.0%
GTTCCCTTGACACATTACTC+AGG - chr7_2:43622560-43622579 None:intergenic 45.0%
CAAGCCAACCATGCATGTTA+AGG + chr7_2:43622983-43623002 Msa1058620:CDS 45.0%
GGAACCTTAACATGCATGGT+TGG - chr7_2:43622990-43623009 None:intergenic 45.0%
CTTCGGAACCTTAACATGCA+TGG - chr7_2:43622994-43623013 None:intergenic 45.0%
CAAGTCGAATTGGTGAGCTT+CGG - chr7_2:43623011-43623030 None:intergenic 45.0%
ACTGTCCTTGCAAGTCGAAT+TGG - chr7_2:43623021-43623040 None:intergenic 45.0%
AGAGATGAAGTTCCTGCTCT+TGG - chr7_2:43623162-43623181 None:intergenic 45.0%
! CTTTTAGTGAGCAAAGGGTG+AGG + chr7_2:43623358-43623377 Msa1058620:CDS 45.0%
GTGAGGTTTCTGAGTTGTTG+AGG + chr7_2:43623439-43623458 Msa1058620:CDS 45.0%
! ATCCTGACACATGGTAGTGT+TGG + chr7_2:43623495-43623514 Msa1058620:CDS 45.0%
TGTGCCAGAAAATATTGGCG+AGG + chr7_2:43623518-43623537 Msa1058620:CDS 45.0%
! GAAGCCTCGCCAATATTTTC+TGG - chr7_2:43623525-43623544 None:intergenic 45.0%
GACTCTGAATCAGTGTGCAT+AGG + chr7_2:43623609-43623628 Msa1058620:CDS 45.0%
CTAAGCTGTGCCTGTATCTA+TGG + chr7_2:43623738-43623757 Msa1058620:three_prime_UTR 45.0%
!! AATTAATAAAAATTAATAAG+AGG - chr7_2:43621630-43621649 None:intergenic 5.0%
AGGGTTCGCATCACACACTT+CGG - chr7_2:43618942-43618961 None:intergenic 50.0%
! GGTCGAAGACAGGTCTTTTC+CGG + chr7_2:43619016-43619035 Msa1058620:five_prime_UTR 50.0%
!! CAATGGAAGAGTGCTCGTTG+TGG + chr7_2:43619105-43619124 Msa1058620:five_prime_UTR 50.0%
!! GAAGAGTGCTCGTTGTGGAT+GGG + chr7_2:43619110-43619129 Msa1058620:five_prime_UTR 50.0%
!! AAGAGTGCTCGTTGTGGATG+GGG + chr7_2:43619111-43619130 Msa1058620:five_prime_UTR 50.0%
TTGCGCTGTGCAATATTGGG+TGG + chr7_2:43619142-43619161 Msa1058620:five_prime_UTR 50.0%
GATATTGGGGTGAGAGCTCT+TGG + chr7_2:43619253-43619272 Msa1058620:five_prime_UTR 50.0%
!! TGGCTTTATGCAGACACCGA+TGG + chr7_2:43619364-43619383 Msa1058620:five_prime_UTR 50.0%
TGGCCCTGTGGTAAAGAATG+TGG + chr7_2:43620168-43620187 Msa1058620:five_prime_UTR 50.0%
TGAAGGGCAGCCATTGTTGT+CGG + chr7_2:43620361-43620380 Msa1058620:five_prime_UTR 50.0%
AGCTGCACAACCGACAACAA+TGG - chr7_2:43620374-43620393 None:intergenic 50.0%
ATCAGGCACGAGACATGCTT+GGG - chr7_2:43620405-43620424 None:intergenic 50.0%
AATCAGGCACGAGACATGCT+TGG - chr7_2:43620406-43620425 None:intergenic 50.0%
TGCATGACAAGCTTGCAGTC+TGG + chr7_2:43620884-43620903 Msa1058620:five_prime_UTR 50.0%
GCCCAGAGAAAAAGCCAACT+TGG + chr7_2:43621418-43621437 Msa1058620:five_prime_UTR 50.0%
GTCTAGCACTCTAGCCAAGT+TGG - chr7_2:43621435-43621454 None:intergenic 50.0%
ACCAAGATGCCGTGGCAAAT+TGG - chr7_2:43621538-43621557 None:intergenic 50.0%
AGAACAAGACCAAGATGCCG+TGG - chr7_2:43621546-43621565 None:intergenic 50.0%
! TGCAGTGTTGTTGCATGCTG+TGG - chr7_2:43621596-43621615 None:intergenic 50.0%
!! TTGGTTTTCCCCCATGGAGA+TGG - chr7_2:43621710-43621729 None:intergenic 50.0%
GGTTTGCCCATCATGATGGT+AGG - chr7_2:43621833-43621852 None:intergenic 50.0%
!! TCTGATTCTGGCTTCTGTGG+TGG + chr7_2:43621960-43621979 Msa1058620:CDS 50.0%
!! CTGATTCTGGCTTCTGTGGT+GGG + chr7_2:43621961-43621980 Msa1058620:CDS 50.0%
!!! GAGTTGGGTTGGTTCGGTTT+TGG + chr7_2:43621983-43622002 Msa1058620:CDS 50.0%
! ATGGTGGAGTTAGTGCTGCT+TGG + chr7_2:43622085-43622104 Msa1058620:CDS 50.0%
!! TGGTGGAGTTAGTGCTGCTT+GGG + chr7_2:43622086-43622105 Msa1058620:CDS 50.0%
! TAGAGAGCTTGGGGTGTTTC+AGG + chr7_2:43622197-43622216 Msa1058620:CDS 50.0%
CCCTTGACACATTACTCAGG+AGG - chr7_2:43622557-43622576 None:intergenic 50.0%
! GCTCACCAATTCGACTTGCA+AGG + chr7_2:43623013-43623032 Msa1058620:CDS 50.0%
GCTGAGATTCCTAGCACCAA+TGG - chr7_2:43623057-43623076 None:intergenic 50.0%
AGTTCCTGCTCTTGGATGCA+GGG - chr7_2:43623154-43623173 None:intergenic 50.0%
AAGTTCCTGCTCTTGGATGC+AGG - chr7_2:43623155-43623174 None:intergenic 50.0%
CACCAACACTACCATGTGTC+AGG - chr7_2:43623500-43623519 None:intergenic 50.0%
CGGGAGTTCCTCGAAGAGAA+AGG + chr7_2:43619082-43619101 Msa1058620:five_prime_UTR 55.0%
!! GGAAGAGTGCTCGTTGTGGA+TGG + chr7_2:43619109-43619128 Msa1058620:five_prime_UTR 55.0%
! AGAGTGCTCGTTGTGGATGG+GGG + chr7_2:43619112-43619131 Msa1058620:five_prime_UTR 55.0%
GCACAGAACAATGGATGGGC+AGG + chr7_2:43619181-43619200 Msa1058620:five_prime_UTR 55.0%
CTGGGACAAGGATCGGTGAT+GGG + chr7_2:43619338-43619357 Msa1058620:five_prime_UTR 55.0%
TGGGACAAGGATCGGTGATG+GGG + chr7_2:43619339-43619358 Msa1058620:five_prime_UTR 55.0%
!! CAAGGATCGGTGATGGGGAA+TGG + chr7_2:43619344-43619363 Msa1058620:five_prime_UTR 55.0%
AAAAAGTTGCAGTGGGGGGG+AGG + chr7_2:43620138-43620157 Msa1058620:five_prime_UTR 55.0%
AAAAGTTGCAGTGGGGGGGA+GGG + chr7_2:43620139-43620158 Msa1058620:five_prime_UTR 55.0%
GCCAATTTGCCACGGCATCT+TGG + chr7_2:43621534-43621553 Msa1058620:five_prime_UTR 55.0%
! TGGCTTCTGTGGTGGGAGTT+GGG + chr7_2:43621968-43621987 Msa1058620:CDS 55.0%
! TTCTGTGGTGGGAGTTGGGT+TGG + chr7_2:43621972-43621991 Msa1058620:CDS 55.0%
!! TGGTGGGAGTTGGGTTGGTT+CGG + chr7_2:43621977-43621996 Msa1058620:CDS 55.0%
!!! TGGGTTGGTTCGGTTTTGGG+TGG + chr7_2:43621987-43622006 Msa1058620:CDS 55.0%
!!! GTTGGTTCGGTTTTGGGTGG+AGG + chr7_2:43621990-43622009 Msa1058620:CDS 55.0%
!! GGTGGAGTTAGTGCTGCTTG+GGG + chr7_2:43622087-43622106 Msa1058620:CDS 55.0%
GTAACCCTGCATCCAAGAGC+AGG + chr7_2:43623147-43623166 Msa1058620:CDS 55.0%
CTGTGCATGCAAAGCGCACC+TGG - chr7_2:43618643-43618662 None:intergenic 60.0%
CTTCGAGGAACTCCCGAACC+AGG - chr7_2:43619078-43619097 None:intergenic 60.0%
GCTGGGACAAGGATCGGTGA+TGG + chr7_2:43619337-43619356 Msa1058620:five_prime_UTR 60.0%
AAAGTTGCAGTGGGGGGGAG+GGG + chr7_2:43620140-43620159 Msa1058620:five_prime_UTR 60.0%
! CTGGCTTCTGTGGTGGGAGT+TGG + chr7_2:43621967-43621986 Msa1058620:CDS 60.0%
AAGTTGCAGTGGGGGGGAGG+GGG + chr7_2:43620141-43620160 Msa1058620:five_prime_UTR 65.0%
AGTTGCAGTGGGGGGGAGGG+GGG + chr7_2:43620142-43620161 Msa1058620:five_prime_UTR 70.0%
AGTGGGGGGGAGGGGGGATT+TGG + chr7_2:43620148-43620167 Msa1058620:five_prime_UTR 70.0%
GGAGGGGGGATTTGGCCCTG+TGG + chr7_2:43620156-43620175 Msa1058620:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 43618046 43623825 43618046 ID=Msa1058620;Name=Msa1058620
chr7_2 mRNA 43618046 43623825 43618046 ID=Msa1058620-mRNA-1;Parent=Msa1058620;Name=Msa1058620-mRNA-1;_AED=0.00;_eAED=0.00;_QI=3013|1|1|1|0.5|0.33|3|190|400
chr7_2 exon 43618046 43618248 43618046 ID=Msa1058620-mRNA-1:exon:7859;Parent=Msa1058620-mRNA-1
chr7_2 exon 43618905 43622218 43618905 ID=Msa1058620-mRNA-1:exon:7860;Parent=Msa1058620-mRNA-1
chr7_2 exon 43622937 43623825 43622937 ID=Msa1058620-mRNA-1:exon:7861;Parent=Msa1058620-mRNA-1
chr7_2 five_prime_UTR 43618046 43618248 43618046 ID=Msa1058620-mRNA-1:five_prime_utr;Parent=Msa1058620-mRNA-1
chr7_2 five_prime_UTR 43618905 43621714 43618905 ID=Msa1058620-mRNA-1:five_prime_utr;Parent=Msa1058620-mRNA-1
chr7_2 CDS 43621715 43622218 43621715 ID=Msa1058620-mRNA-1:cds;Parent=Msa1058620-mRNA-1
chr7_2 CDS 43622937 43623635 43622937 ID=Msa1058620-mRNA-1:cds;Parent=Msa1058620-mRNA-1
chr7_2 three_prime_UTR 43623636 43623825 43623636 ID=Msa1058620-mRNA-1:three_prime_utr;Parent=Msa1058620-mRNA-1
Gene Sequence

>Msa1058620

ATGGGGGAAAACCAAAAAGACTCATTTGTTTTGCCTACACCAGCAGACTTACTCTACAATAGCATGGCCTCTGTCTTTTCCCCTTTCTACTCTCTTTTGACAGTGACATCTGAGTCCTACCATCATGATGGGCAAACCAAAGACAATGCTCCTTCACAAATAGCTTATGGTAGCATAGTTTTGCTTAAGAAACTGGGACTTTGTTTTCTGAGTGCTGCATATGTGTGTATGATTCTGTCCTTTGTTCTGATTCTGGCTTCTGTGGTGGGAGTTGGGTTGGTTCGGTTTTGGGTGGAGGAACCTGTCATTGTTAATGAAAGTTTGTATTTTGATTACACTGATGCTCATCCTACAGCTGTATTTTCATTTAATGGTGGAGTTAGTGCTGCTTGGGGTTATATTAATAAAAAGCATATACGTGTTCCAGTTGGTCACACATTTTCTGTTTCTTTGTCCCTCTTGATGCCTGAATCTGACTTCAATAGAGAGCTTGGGGTGTTTCAGCTGACAGCAGAACTCCTATCAGTAAACGGAAATGTGATAGCAAAATCAAGCCAACCATGCATGTTAAGGTTCCGAAGCTCACCAATTCGACTTGCAAGGACAGTTATGATGGGTGTGCCATTGGTGCTAGGAATCTCAGCTGAGACTCAGAAAATCAATGTAGAAATATTGAGGCACAAGGAACAAAATCAAAGAACCAATGCTATAAGAGTAACCCTGCATCCAAGAGCAGGAACTTCATCTCTTCCACAACTATACGAAGCCGAAATTGTTATAAACTCCCATTTACCTTGGGCTAAAGAGTTAATTCGGAATTGGAAGTGGACTTTCTATGTTTGGGTGTCATTATATGTGTACATTGTGCTACTTATGCTTCTCTTATATTGTTACAGGCCACTCATCTTTCTTGTCACACAAGATACTTTTAGTGAGCAAAGGGTGAGGGAAGTGATATGTGAAGAACATAAAGAATTACAACTTGGAGAATTATCAGGAGATGAGAGTGAGGTTTCTGAGTTGTTGAGGAAATGGAGACTCAGCAGAAGCAAGAGAAAGACTATCCTGACACATGGTAGTGTTGGTGTGCCAGAAAATATTGGCGAGGCTTCCAGTATTAGCATGACGACTACTAGAGAAGATGTAACCAGTGTTGCTGTTGAAGATGATGTTGAGGACTCTGAATCAGTGTGCATAGGTTAA
Protein sequence

>Msa1058620

MGENQKDSFVLPTPADLLYNSMASVFSPFYSLLTVTSESYHHDGQTKDNAPSQIAYGSIVLLKKLGLCFLSAAYVCMILSFVLILASVVGVGLVRFWVEEPVIVNESLYFDYTDAHPTAVFSFNGGVSAAWGYINKKHIRVPVGHTFSVSLSLLMPESDFNRELGVFQLTAELLSVNGNVIAKSSQPCMLRFRSSPIRLARTVMMGVPLVLGISAETQKINVEILRHKEQNQRTNAIRVTLHPRAGTSSLPQLYEAEIVINSHLPWAKELIRNWKWTFYVWVSLYVYIVLLMLLLYCYRPLIFLVTQDTFSEQRVREVICEEHKELQLGELSGDESEVSELLRKWRLSRSKRKTILTHGSVGVPENIGEASSISMTTTREDVTSVAVEDDVEDSESVCIG*