Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059540 | XP_013448610.1 | 98.374 | 369 | 6 | 0 | 1 | 369 | 1 | 369 | 0.0 | 762 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059540 | sp|Q42561|FATA1_ARATH | 67.385 | 371 | 104 | 4 | 1 | 366 | 1 | 359 | 2.24e-177 | 499 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059540 | A0A072TYW9 | 98.374 | 369 | 6 | 0 | 1 | 369 | 1 | 369 | 0.0 | 762 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029710 | Msa1059540 | 0.801391 | 9.204936e-49 | -8.615850e-47 |
| Msa1059540 | Msa1160570 | 0.812923 | 3.320783e-51 | -8.615850e-47 |
| Msa1059540 | Msa1419850 | 0.802366 | 5.804961e-49 | -8.615850e-47 |
| Msa0278620 | Msa1059540 | 0.803645 | 3.158618e-49 | -8.615850e-47 |
| Msa0318000 | Msa1059540 | 0.807304 | 5.397401e-50 | -8.615850e-47 |
| Msa0970520 | Msa1059540 | 0.820550 | 6.464649e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059540 | MtrunA17_Chr7g0235761 | 98.374 | 369 | 6 | 0 | 1 | 369 | 1 | 369 | 0.0 | 762 |
| Msa1059540 | MtrunA17_Chr2g0306391 | 45.603 | 307 | 144 | 7 | 62 | 368 | 118 | 401 | 1.44e-85 | 265 |
| Msa1059540 | MtrunA17_Chr4g0062811 | 47.039 | 304 | 137 | 7 | 67 | 368 | 119 | 400 | 2.54e-84 | 262 |
| Msa1059540 | MtrunA17_Chr3g0132041 | 42.857 | 294 | 154 | 6 | 74 | 366 | 103 | 383 | 3.20e-78 | 245 |
| Msa1059540 | MtrunA17_Chr1g0208941 | 41.971 | 274 | 136 | 6 | 111 | 366 | 95 | 363 | 2.59e-60 | 198 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1059540 | AT3G25110.1 | 67.385 | 371 | 104 | 4 | 1 | 366 | 1 | 359 | 2.28e-178 | 499 |
| Msa1059540 | AT4G13050.1 | 65.963 | 379 | 107 | 4 | 1 | 369 | 1 | 367 | 3.79e-176 | 494 |
| Msa1059540 | AT1G08510.1 | 43.000 | 300 | 151 | 5 | 67 | 366 | 123 | 402 | 2.14e-76 | 242 |
Find 108 sgRNAs with CRISPR-Local
Find 514 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAAGAAAATTCCAAAAT+TGG | 0.139050 | 7_2:+45877394 | Msa1059540:CDS |
| CATGACTCAATGCGGGTTTA+TGG | 0.155153 | 7_2:+45872046 | Msa1059540:CDS |
| TGAGCAGGATCTCCCAATTT+TGG | 0.174673 | 7_2:-45877407 | None:intergenic |
| TGGAAATGGGTTCGAATTTA+AGG | 0.178757 | 7_2:-45871915 | None:intergenic |
| GTTAACAATGTCGCCTATAT+TGG | 0.254819 | 7_2:+45877631 | Msa1059540:CDS |
| CAATTCTAGACTTGGTCTTA+TGG | 0.261441 | 7_2:+45877430 | Msa1059540:CDS |
| TGGCGAACCGGTTGCGGCTT+GGG | 0.268462 | 7_2:+45872204 | Msa1059540:CDS |
| AGAAGAAATTTGAATGGAAA+TGG | 0.281050 | 7_2:-45871929 | None:intergenic |
| ACCGGCCGGAGCTCAGTTAA+AGG | 0.285337 | 7_2:+45872089 | Msa1059540:CDS |
| AACCGGGTTGAACCGGATAT+TGG | 0.294350 | 7_2:+45872176 | Msa1059540:CDS |
| AACCATTGCTAATCTCTTGC+AGG | 0.304014 | 7_2:+45872313 | Msa1059540:CDS |
| ATAAAGAGAAGTTCATTGTT+AGG | 0.329960 | 7_2:+45872252 | Msa1059540:CDS |
| TGAACCGGATATTGGGAGTT+TGG | 0.348811 | 7_2:+45872184 | Msa1059540:CDS |
| TGAGAAAATATCATCTCATA+TGG | 0.350643 | 7_2:+45874284 | Msa1059540:CDS |
| AGGACGGTGCGGTGGTGAAC+CGG | 0.354014 | 7_2:+45872159 | Msa1059540:CDS |
| CCGTTCTACAAAGGCGTATC+CGG | 0.367777 | 7_2:+45872115 | Msa1059540:CDS |
| ATGAAGGACTTGAAATAAAC+CGG | 0.377663 | 7_2:+45878810 | Msa1059540:CDS |
| ATGTCGAGATCGGATCTTCT+AGG | 0.378784 | 7_2:-45877598 | None:intergenic |
| AATTCCTATCTCCGTCTCTA+AGG | 0.380930 | 7_2:+45879132 | Msa1059540:three_prime_UTR |
| GCATTCTCGTCTGTAATCTA+AGG | 0.386254 | 7_2:-45878636 | None:intergenic |
| TTAAAGAAAATTCCAAAATT+GGG | 0.388373 | 7_2:+45877395 | Msa1059540:CDS |
| TACAAAGGCGTATCCGGTTC+AGG | 0.389891 | 7_2:+45872121 | Msa1059540:CDS |
| ATGACTCAATGCGGGTTTAT+GGG | 0.390645 | 7_2:+45872047 | Msa1059540:CDS |
| TTGGCGAACCGGTTGCGGCT+TGG | 0.400870 | 7_2:+45872203 | Msa1059540:CDS |
| GAAGAAATTTGAATGGAAAT+GGG | 0.404075 | 7_2:-45871928 | None:intergenic |
| TTCCATGCAATGGGGTGGAC+CGG | 0.405990 | 7_2:+45872015 | Msa1059540:CDS |
| ACCGGGTTGAACCGGATATT+GGG | 0.411157 | 7_2:+45872177 | Msa1059540:CDS |
| TTCTCCATTCTGTTCGCCCC+CGG | 0.443197 | 7_2:-45878829 | None:intergenic |
| CTCAAGCACCCATCCAATAT+AGG | 0.452585 | 7_2:-45877644 | None:intergenic |
| TACAAGCTCATAGGTGTTTG+TGG | 0.453360 | 7_2:-45879088 | None:intergenic |
| TGTTGAAACTTCCATGCAAT+GGG | 0.456338 | 7_2:+45872006 | Msa1059540:CDS |
| GGTGGTGAACCGGGTTGAAC+CGG | 0.456412 | 7_2:+45872169 | Msa1059540:CDS |
| TGTAATCATGCTCAGATTGT+TGG | 0.461753 | 7_2:+45874226 | Msa1059540:CDS |
| TTAGATAGAGATGGGAAAGA+AGG | 0.462330 | 7_2:-45871876 | None:intergenic |
| ATATTGGGAGTTTGGCGAAC+CGG | 0.462405 | 7_2:+45872192 | Msa1059540:CDS |
| AGGAAACATTACAAGCTCAT+AGG | 0.474450 | 7_2:-45879097 | None:intergenic |
| CGAAAGAGAAGAAATTTGAA+TGG | 0.477424 | 7_2:-45871935 | None:intergenic |
| AAATCCTTAGAGACGGAGAT+AGG | 0.480374 | 7_2:-45879136 | None:intergenic |
| ATAAGCTCCCAAGCCGCAAC+CGG | 0.481656 | 7_2:-45872211 | None:intergenic |
| TGAATTGAATTAGATAGAGA+TGG | 0.488630 | 7_2:-45871885 | None:intergenic |
| TTCGCCAAACTCCCAATATC+CGG | 0.492747 | 7_2:-45872188 | None:intergenic |
| CCTGCTCACAATTCTAGACT+TGG | 0.496653 | 7_2:+45877422 | Msa1059540:CDS |
| GGAGTTTGGCGAACCGGTTG+CGG | 0.504279 | 7_2:+45872198 | Msa1059540:CDS |
| CTACTTAGATTGTCTAATGA+AGG | 0.504999 | 7_2:+45878794 | Msa1059540:CDS |
| CTTGGGAGCTTATCTGAGGA+TGG | 0.509398 | 7_2:+45872221 | Msa1059540:CDS |
| CAGAAGGACGGGCTGGAACA+AGG | 0.509632 | 7_2:+45874460 | Msa1059540:CDS |
| ATGTTGAAACTTCCATGCAA+TGG | 0.511109 | 7_2:+45872005 | Msa1059540:CDS |
| GGACGGTGCGGTGGTGAACC+GGG | 0.511247 | 7_2:+45872160 | Msa1059540:CDS |
| ATTGTTAGGAGCTATGAAGT+TGG | 0.512151 | 7_2:+45872266 | Msa1059540:CDS |
| GCTGACGCTACAGCCTGAAC+CGG | 0.513255 | 7_2:-45872134 | None:intergenic |
| TACGCAACGAATGAAGTAAT+CGG | 0.516477 | 7_2:+45874504 | Msa1059540:CDS |
| ACAATGTCGCCTATATTGGA+TGG | 0.518087 | 7_2:+45877635 | Msa1059540:CDS |
| TCCATGCAATGGGGTGGACC+GGG | 0.521004 | 7_2:+45872016 | Msa1059540:CDS |
| GAATTGAATTAGATAGAGAT+GGG | 0.522067 | 7_2:-45871884 | None:intergenic |
| AAGAACAAAACCAACCATGC+AGG | 0.527681 | 7_2:-45874343 | None:intergenic |
| TCCTTTAACTGAGCTCCGGC+CGG | 0.533366 | 7_2:-45872090 | None:intergenic |
| CCGGATACGCCTTTGTAGAA+CGG | 0.536449 | 7_2:-45872115 | None:intergenic |
| TTCACCTCATGACTCAATGC+GGG | 0.539166 | 7_2:+45872039 | Msa1059540:CDS |
| CATTTATTGTTTCAGCAAGT+GGG | 0.544829 | 7_2:+45875900 | Msa1059540:intron |
| TAAGTAGATGAAGAAACTGT+TGG | 0.555570 | 7_2:-45878778 | None:intergenic |
| ACCCGGTCCACCCCATTGCA+TGG | 0.556937 | 7_2:-45872017 | None:intergenic |
| ATGCTGATTCATGTCGAGAT+CGG | 0.559767 | 7_2:-45877608 | None:intergenic |
| TTTACTGTCCTCGAGAGCTA+AGG | 0.562749 | 7_2:+45875989 | Msa1059540:CDS |
| AAATGGATCGGGTAAAGCAA+TGG | 0.564022 | 7_2:+45878739 | Msa1059540:CDS |
| GAGAAAATATCATCTCATAT+GGG | 0.566914 | 7_2:+45874285 | Msa1059540:CDS |
| ATGGTGTCAAGCAGAAGGAC+GGG | 0.569636 | 7_2:+45874449 | Msa1059540:CDS |
| TCAGGCTGTAGCGTCAGCTA+AGG | 0.569910 | 7_2:+45872139 | Msa1059540:CDS |
| TGTCAAGCAGAAGGACGGGC+TGG | 0.573618 | 7_2:+45874453 | Msa1059540:CDS |
| TAGGAATTCTTCACTTAACA+AGG | 0.577945 | 7_2:-45879117 | None:intergenic |
| AGAACAAAACCAACCATGCA+GGG | 0.581789 | 7_2:-45874342 | None:intergenic |
| CATGGTGTCAAGCAGAAGGA+CGG | 0.586337 | 7_2:+45874448 | Msa1059540:CDS |
| CCAAGTCTAGAATTGTGAGC+AGG | 0.590441 | 7_2:-45877422 | None:intergenic |
| CAATGTCGCCTATATTGGAT+GGG | 0.590779 | 7_2:+45877636 | Msa1059540:CDS |
| AACCTGCAAGAGATTAGCAA+TGG | 0.591875 | 7_2:-45872315 | None:intergenic |
| AATATTGTAATAATTATGAG+TGG | 0.593990 | 7_2:+45878961 | Msa1059540:three_prime_UTR |
| TAAAGGATTCCGTTCTACAA+AGG | 0.594910 | 7_2:+45872106 | Msa1059540:CDS |
| TCCCAATATCCGGTTCAACC+CGG | 0.595822 | 7_2:-45872178 | None:intergenic |
| AAGTCTACAAATACCCTGCA+TGG | 0.597776 | 7_2:+45874329 | Msa1059540:CDS |
| GTCAGCTAAGGACGGTGCGG+TGG | 0.599362 | 7_2:+45872151 | Msa1059540:CDS |
| CTATATTGGATGGGTGCTTG+AGG | 0.600206 | 7_2:+45877645 | Msa1059540:CDS |
| TGTTGAGAGAAGTTTACTCA+AGG | 0.603348 | 7_2:-45878884 | None:intergenic |
| GAGACATGGTGTCAAGCAGA+AGG | 0.605086 | 7_2:+45874444 | Msa1059540:CDS |
| ATGTGGCACGTGTTCAAGTG+TGG | 0.608173 | 7_2:-45871852 | None:intergenic |
| TGAAGGACTTGAAATAAACC+GGG | 0.608698 | 7_2:+45878811 | Msa1059540:CDS |
| TGTGGCACGTGTTCAAGTGT+GGG | 0.609380 | 7_2:-45871851 | None:intergenic |
| AAATGGGTTCGAATTTAAGG+AGG | 0.609582 | 7_2:-45871912 | None:intergenic |
| ATTGAGTCATGAGGTGAACC+CGG | 0.614497 | 7_2:-45872034 | None:intergenic |
| AATTGATAAATCCTTAGAGA+CGG | 0.616171 | 7_2:-45879143 | None:intergenic |
| GGAATCCTTTAACTGAGCTC+CGG | 0.618360 | 7_2:-45872094 | None:intergenic |
| GCGGCTTGGGAGCTTATCTG+AGG | 0.620171 | 7_2:+45872217 | Msa1059540:CDS |
| GAGATGGGAAAGAAGGAATG+TGG | 0.639826 | 7_2:-45871869 | None:intergenic |
| AGTACCGACCTTAGCTCTCG+AGG | 0.641152 | 7_2:-45875997 | None:intergenic |
| TAGCTATCGATGATTTCTTG+AGG | 0.641686 | 7_2:-45878596 | None:intergenic |
| AGTTGATTCACTAACAAGTG+TGG | 0.644468 | 7_2:+45878673 | Msa1059540:CDS |
| GAAACTTCCATGCAATGGGG+TGG | 0.660785 | 7_2:+45872010 | Msa1059540:CDS |
| GCTGTAGCGTCAGCTAAGGA+CGG | 0.669924 | 7_2:+45872143 | Msa1059540:CDS |
| TAAACCCGCATTGAGTCATG+AGG | 0.675733 | 7_2:-45872043 | None:intergenic |
| ACAAGTGTGGAAGCACGTGA+AGG | 0.679433 | 7_2:+45878686 | Msa1059540:CDS |
| GAAGGACTTGAAATAAACCG+GGG | 0.685296 | 7_2:+45878812 | Msa1059540:CDS |
| AGCGTCAGCTAAGGACGGTG+CGG | 0.685500 | 7_2:+45872148 | Msa1059540:CDS |
| TAATGATGAATGAGGACACG+AGG | 0.687767 | 7_2:+45875923 | Msa1059540:CDS |
| CAAGTGGGTAATGATGAATG+AGG | 0.688947 | 7_2:+45875915 | Msa1059540:CDS |
| GTTCACCTCATGACTCAATG+CGG | 0.701124 | 7_2:+45872038 | Msa1059540:CDS |
| GGAAGCACGTGAAGGCGCTG+AGG | 0.713955 | 7_2:+45878694 | Msa1059540:CDS |
| AAGGACTTGAAATAAACCGG+GGG | 0.736513 | 7_2:+45878813 | Msa1059540:CDS |
| ATGTTGTTGAGATAGAGACA+TGG | 0.775216 | 7_2:+45874430 | Msa1059540:CDS |
| GTTGAAACTTCCATGCAATG+GGG | 0.786120 | 7_2:+45872007 | Msa1059540:CDS |
| AAGTAATCGGAAGAGCAACG+AGG | 0.793192 | 7_2:+45874517 | Msa1059540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGATTAACAATTAAATTA+AGG | - | chr7_2:45873225-45873244 | None:intergenic | 10.0% |
| !!! | TTTTCTTTTTTTTTTTTGAA+AGG | + | chr7_2:45873443-45873462 | Msa1059540:intron | 10.0% |
| !!! | TTTCTTTTTTTTTTTTGAAA+GGG | + | chr7_2:45873444-45873463 | Msa1059540:intron | 10.0% |
| !! | AGTATTATTACAATATATAT+TGG | + | chr7_2:45873531-45873550 | Msa1059540:intron | 10.0% |
| !!! | TATTTTCTAAAAAAAAATGA+CGG | + | chr7_2:45873849-45873868 | Msa1059540:intron | 10.0% |
| !!! | AATTTTAAATAAACTAAGTA+CGG | + | chr7_2:45874914-45874933 | Msa1059540:intron | 10.0% |
| !!! | AATACTTTTTTAATTGATTG+TGG | + | chr7_2:45872458-45872477 | Msa1059540:intron | 15.0% |
| !!! | CATTTTATATTATAGTTTTG+AGG | + | chr7_2:45872967-45872986 | Msa1059540:intron | 15.0% |
| !! | TAAGACATAGAATTAATTTA+AGG | + | chr7_2:45873158-45873177 | Msa1059540:intron | 15.0% |
| !! | AAGACATAGAATTAATTTAA+GGG | + | chr7_2:45873159-45873178 | Msa1059540:intron | 15.0% |
| !! | ATTACAATATATATTGGATT+TGG | + | chr7_2:45873537-45873556 | Msa1059540:intron | 15.0% |
| !!! | ACAAATTTACCTTTTAAATT+AGG | + | chr7_2:45874541-45874560 | Msa1059540:intron | 15.0% |
| !!! | ATAAAATTTTCAAGAACAAA+AGG | - | chr7_2:45874776-45874795 | None:intergenic | 15.0% |
| !!! | ATTTTAAATAAACTAAGTAC+GGG | + | chr7_2:45874915-45874934 | Msa1059540:intron | 15.0% |
| !! | TAATAAAAAATGTACAGAAA+AGG | + | chr7_2:45875149-45875168 | Msa1059540:intron | 15.0% |
| !! | TATATGTAAATATCAATTCA+AGG | + | chr7_2:45877293-45877312 | Msa1059540:intron | 15.0% |
| !! | ATATGTAAATATCAATTCAA+GGG | + | chr7_2:45877294-45877313 | Msa1059540:intron | 15.0% |
| !! | TTAAAGAAAATTCCAAAATT+GGG | + | chr7_2:45877395-45877414 | Msa1059540:CDS | 15.0% |
| !!! | TAAATATTTTAAAAACCAAC+CGG | + | chr7_2:45878199-45878218 | Msa1059540:intron | 15.0% |
| !! | AATATTGTAATAATTATGAG+TGG | + | chr7_2:45878961-45878980 | Msa1059540:three_prime_UTR | 15.0% |
| !! | AGTGTCATAATTTATATCTT+TGG | + | chr7_2:45872647-45872666 | Msa1059540:intron | 20.0% |
| !!! | ATGTTTTTTGAGATTATTTC+TGG | + | chr7_2:45872760-45872779 | Msa1059540:intron | 20.0% |
| !! | ATTAATTCTATGTCTTAGTA+CGG | - | chr7_2:45873155-45873174 | None:intergenic | 20.0% |
| !! | AAGAGATAGAAAAGAATATA+AGG | + | chr7_2:45873329-45873348 | Msa1059540:intron | 20.0% |
| !! | GCATATTAAACATTGAAATT+TGG | + | chr7_2:45873763-45873782 | Msa1059540:intron | 20.0% |
| !! | CTTAAGAACAAGTTAATAAT+AGG | - | chr7_2:45873915-45873934 | None:intergenic | 20.0% |
| !!! | ATTTACCTTTTAAATTAGGA+TGG | + | chr7_2:45874545-45874564 | Msa1059540:intron | 20.0% |
| !! | TTGATATTATCATACACTAA+AGG | + | chr7_2:45874607-45874626 | Msa1059540:intron | 20.0% |
| !! | TGATATTATCATACACTAAA+GGG | + | chr7_2:45874608-45874627 | Msa1059540:intron | 20.0% |
| !!! | GAAAATTTTATTTTCTCATC+TGG | + | chr7_2:45874785-45874804 | Msa1059540:intron | 20.0% |
| !!! | TGTGTTTTTGTTTTTTGAAT+GGG | - | chr7_2:45875479-45875498 | None:intergenic | 20.0% |
| !!! | TTGTGTTTTTGTTTTTTGAA+TGG | - | chr7_2:45875480-45875499 | None:intergenic | 20.0% |
| !! | AAAAAACAAAAACACAAACA+GGG | + | chr7_2:45875483-45875502 | Msa1059540:intron | 20.0% |
| !!! | TCTTTTAGTAGCAAAAATAT+AGG | + | chr7_2:45875601-45875620 | Msa1059540:intron | 20.0% |
| !!! | TTTTACAATAATCAGTATCT+TGG | - | chr7_2:45875630-45875649 | None:intergenic | 20.0% |
| !! | TTTGTCCAAATTTAAATCTT+AGG | - | chr7_2:45875707-45875726 | None:intergenic | 20.0% |
| !! | ATTAATTGTTAATCATACCA+TGG | - | chr7_2:45875762-45875781 | None:intergenic | 20.0% |
| !!! | ATAGGAGAAAAATACTTTTT+GGG | + | chr7_2:45876122-45876141 | Msa1059540:intron | 20.0% |
| !!! | TGTAACTTTTATTTAGAATC+AGG | + | chr7_2:45876280-45876299 | Msa1059540:intron | 20.0% |
| !! | ACTTTATGATATCAAAGATA+CGG | - | chr7_2:45876468-45876487 | None:intergenic | 20.0% |
| !! | TTATATTCATAATAACTCCT+GGG | - | chr7_2:45876491-45876510 | None:intergenic | 20.0% |
| !! | TTTATATTCATAATAACTCC+TGG | - | chr7_2:45876492-45876511 | None:intergenic | 20.0% |
| !! | AAAAACTTTAACCTTCAAAA+AGG | - | chr7_2:45876583-45876602 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTGTTGGAAATAA+AGG | + | chr7_2:45876598-45876617 | Msa1059540:intron | 20.0% |
| !! | GTTGGAAATATATAGAAAAA+TGG | - | chr7_2:45876973-45876992 | None:intergenic | 20.0% |
| !! | TATAGGAATAGATGTATAAT+TGG | + | chr7_2:45877196-45877215 | Msa1059540:intron | 20.0% |
| !! | ATAGGAATAGATGTATAATT+GGG | + | chr7_2:45877197-45877216 | Msa1059540:intron | 20.0% |
| !! | CTTAAAGAAAATTCCAAAAT+TGG | + | chr7_2:45877394-45877413 | Msa1059540:CDS | 20.0% |
| !!! | TCCTTTTCTATTATTTTATC+AGG | + | chr7_2:45877481-45877500 | Msa1059540:intron | 20.0% |
| !! | TCCTGATAAAATAATAGAAA+AGG | - | chr7_2:45877485-45877504 | None:intergenic | 20.0% |
| !!! | ACTCAATATTTTTAACTTTG+AGG | + | chr7_2:45877825-45877844 | Msa1059540:intron | 20.0% |
| !!! | AAAAATATTTTTACTGAGAG+TGG | - | chr7_2:45878040-45878059 | None:intergenic | 20.0% |
| !! | TATGAGAACAATTACTTAAA+AGG | + | chr7_2:45878108-45878127 | Msa1059540:intron | 20.0% |
| !! | TTAGTGAATGTTTAAATTAG+TGG | + | chr7_2:45878160-45878179 | Msa1059540:intron | 20.0% |
| !!! | TTTAAATTAGTGGAACTTTT+GGG | + | chr7_2:45878170-45878189 | Msa1059540:intron | 20.0% |
| !!! | AAATATTTTAAAAACCAACC+GGG | + | chr7_2:45878200-45878219 | Msa1059540:intron | 20.0% |
| !! | GTGGTATAAAAATTGTATAA+AGG | - | chr7_2:45878500-45878519 | None:intergenic | 20.0% |
| !! | AAAAATGAAATGAAAACTCA+AGG | - | chr7_2:45879068-45879087 | None:intergenic | 20.0% |
| ! | GAATTGAATTAGATAGAGAT+GGG | - | chr7_2:45871887-45871906 | None:intergenic | 25.0% |
| ! | TGAATTGAATTAGATAGAGA+TGG | - | chr7_2:45871888-45871907 | None:intergenic | 25.0% |
| ! | GAAGAAATTTGAATGGAAAT+GGG | - | chr7_2:45871931-45871950 | None:intergenic | 25.0% |
| ! | AGAAGAAATTTGAATGGAAA+TGG | - | chr7_2:45871932-45871951 | None:intergenic | 25.0% |
| ! | ATAAAGAGAAGTTCATTGTT+AGG | + | chr7_2:45872252-45872271 | Msa1059540:CDS | 25.0% |
| ! | TTTGATCCAATTGTTAATGA+TGG | + | chr7_2:45872386-45872405 | Msa1059540:intron | 25.0% |
| ! | TTGATCCAATTGTTAATGAT+GGG | + | chr7_2:45872387-45872406 | Msa1059540:intron | 25.0% |
| ! | TTGATCCAATTGTTAATGAT+AGG | + | chr7_2:45872387-45872406 | Msa1059540:intron | 25.0% |
| ! | ATATCTCTATTCTCTACTAA+CGG | - | chr7_2:45872860-45872879 | None:intergenic | 25.0% |
| ! | TTAATTCTATGTCTTAGTAC+GGG | - | chr7_2:45873154-45873173 | None:intergenic | 25.0% |
| !!! | AAAGAATATAAGGCTTTGTT+TGG | + | chr7_2:45873339-45873358 | Msa1059540:intron | 25.0% |
| !!! | AAGAATATAAGGCTTTGTTT+GGG | + | chr7_2:45873340-45873359 | Msa1059540:intron | 25.0% |
| !!! | ATTAATTTGCTCAAATGAGA+GGG | - | chr7_2:45873674-45873693 | None:intergenic | 25.0% |
| ! | TATGTTTACCCAATAAACAA+CGG | - | chr7_2:45873949-45873968 | None:intergenic | 25.0% |
| !! | CATTGTCTGTTTTATCAAAT+TGG | + | chr7_2:45873970-45873989 | Msa1059540:intron | 25.0% |
| !! | TATGAGATGATATTTTCTCA+TGG | - | chr7_2:45874284-45874303 | None:intergenic | 25.0% |
| ! | TGAGAAAATATCATCTCATA+TGG | + | chr7_2:45874284-45874303 | Msa1059540:CDS | 25.0% |
| ! | GAGAAAATATCATCTCATAT+GGG | + | chr7_2:45874285-45874304 | Msa1059540:CDS | 25.0% |
| ! | CTGTTGGAATCATTTAAATT+AGG | - | chr7_2:45874405-45874424 | None:intergenic | 25.0% |
| ! | CTAATTTAAATGATTCCAAC+AGG | + | chr7_2:45874403-45874422 | Msa1059540:intron | 25.0% |
| ! | ATAATAAAAATGGGCAAAAC+AGG | + | chr7_2:45874981-45875000 | Msa1059540:intron | 25.0% |
| ! | ATAAAATACCAAAACAGAGT+GGG | + | chr7_2:45875009-45875028 | Msa1059540:intron | 25.0% |
| ! | TTTCATGAATATGCAAAAGA+AGG | - | chr7_2:45875253-45875272 | None:intergenic | 25.0% |
| ! | GCATATTCATGAAATATAAG+TGG | + | chr7_2:45875259-45875278 | Msa1059540:intron | 25.0% |
| ! | TAATTTCAAAAGCTTGTGAA+AGG | - | chr7_2:45875318-45875337 | None:intergenic | 25.0% |
| !!! | ATCTGAGTAATTGCTTTTAA+GGG | - | chr7_2:45875353-45875372 | None:intergenic | 25.0% |
| ! | CAAAAAACAAAAACACAAAC+AGG | + | chr7_2:45875482-45875501 | Msa1059540:intron | 25.0% |
| ! | TGATTATTGTAAAAGTCACA+AGG | + | chr7_2:45875636-45875655 | Msa1059540:intron | 25.0% |
| ! | AAAGACATTTGATAAAGCAT+AGG | + | chr7_2:45876104-45876123 | Msa1059540:intron | 25.0% |
| !! | CATAGGAGAAAAATACTTTT+TGG | + | chr7_2:45876121-45876140 | Msa1059540:intron | 25.0% |
| !!! | TAGGAGAAAAATACTTTTTG+GGG | + | chr7_2:45876123-45876142 | Msa1059540:intron | 25.0% |
| ! | TGATATACTTTATCAAGTTC+TGG | - | chr7_2:45876217-45876236 | None:intergenic | 25.0% |
| !!! | AACTTTTATTTAGAATCAGG+CGG | + | chr7_2:45876283-45876302 | Msa1059540:intron | 25.0% |
| ! | AAGACAAAATCATTTCAAGA+AGG | - | chr7_2:45876318-45876337 | None:intergenic | 25.0% |
| ! | CTTTATGATATCAAAGATAC+GGG | - | chr7_2:45876467-45876486 | None:intergenic | 25.0% |
| !!! | AGGTTAAAGTTTTTGTTTGT+TGG | + | chr7_2:45876589-45876608 | Msa1059540:intron | 25.0% |
| !! | TTGGAAATAAAGGTTTTTCA+GGG | + | chr7_2:45876608-45876627 | Msa1059540:intron | 25.0% |
| ! | AATACAAAATCCTCCTTATT+TGG | + | chr7_2:45876781-45876800 | Msa1059540:intron | 25.0% |
| !! | ATACAAAATCCTCCTTATTT+GGG | + | chr7_2:45876782-45876801 | Msa1059540:intron | 25.0% |
| !!! | ATTTTTTAGTTCCCCAAATA+AGG | - | chr7_2:45876797-45876816 | None:intergenic | 25.0% |
| !! | ATGCACTAATTATTGATTGA+AGG | + | chr7_2:45877050-45877069 | Msa1059540:intron | 25.0% |
| !! | TGCACTAATTATTGATTGAA+GGG | + | chr7_2:45877051-45877070 | Msa1059540:intron | 25.0% |
| !! | TATTGATTGAAGGGTAAAAT+TGG | + | chr7_2:45877060-45877079 | Msa1059540:intron | 25.0% |
| ! | GTATGTTTCATTGGAATTAT+AGG | + | chr7_2:45877179-45877198 | Msa1059540:intron | 25.0% |
| !!! | CTTTTTTCTTTTTTCTTCTG+TGG | + | chr7_2:45877335-45877354 | Msa1059540:intron | 25.0% |
| !! | ATTTTATCAGGAACAAAATG+AGG | + | chr7_2:45877493-45877512 | Msa1059540:intron | 25.0% |
| !! | TTGTATGAAAGTATATCCTA+TGG | - | chr7_2:45877750-45877769 | None:intergenic | 25.0% |
| ! | ATAAAACTAGATAACAGCAT+GGG | - | chr7_2:45877922-45877941 | None:intergenic | 25.0% |
| ! | TATAAAACTAGATAACAGCA+TGG | - | chr7_2:45877923-45877942 | None:intergenic | 25.0% |
| !! | GTTTAAATTAGTGGAACTTT+TGG | + | chr7_2:45878169-45878188 | Msa1059540:intron | 25.0% |
| !!! | AATATTTTAAAAACCAACCG+GGG | + | chr7_2:45878201-45878220 | Msa1059540:intron | 25.0% |
| ! | CAATGATTTAAAAATCCAAC+TGG | - | chr7_2:45878343-45878362 | None:intergenic | 25.0% |
| !! | CAGTTGGATTTTTAAATCAT+TGG | + | chr7_2:45878341-45878360 | Msa1059540:intron | 25.0% |
| ! | ATTTAAGCATCCAAAACATA+GGG | - | chr7_2:45878415-45878434 | None:intergenic | 25.0% |
| ! | TTCATAATGCACAACTATAT+TGG | + | chr7_2:45878472-45878491 | Msa1059540:intron | 25.0% |
| !! | TCTAAAAGCTTTTAATGTTG+TGG | - | chr7_2:45878519-45878538 | None:intergenic | 25.0% |
| !!! | AATCAACTATGTCATTTTGT+TGG | - | chr7_2:45878661-45878680 | None:intergenic | 25.0% |
| ! | ACTCAAAAATACAAATGGAT+CGG | + | chr7_2:45878727-45878746 | Msa1059540:CDS | 25.0% |
| CGAAAGAGAAGAAATTTGAA+TGG | - | chr7_2:45871938-45871957 | None:intergenic | 30.0% | |
| ACTCACCTATCATTAACAAT+TGG | - | chr7_2:45872430-45872449 | None:intergenic | 30.0% | |
| !! | TGTGTGTGATTCTAAGATTA+TGG | + | chr7_2:45872483-45872502 | Msa1059540:intron | 30.0% |
| !! | GTGTGTGATTCTAAGATTAT+GGG | + | chr7_2:45872484-45872503 | Msa1059540:intron | 30.0% |
| ATAAATTATGACACTGACAC+CGG | - | chr7_2:45872642-45872661 | None:intergenic | 30.0% | |
| ! | TGTTTCTGATTTATCTTCAC+CGG | + | chr7_2:45872670-45872689 | Msa1059540:intron | 30.0% |
| AAAGAAACAAAGTTTCCACT+TGG | - | chr7_2:45872712-45872731 | None:intergenic | 30.0% | |
| TTTATATACACTGACAGTGT+AGG | + | chr7_2:45872801-45872820 | Msa1059540:intron | 30.0% | |
| TTATATACACTGACAGTGTA+GGG | + | chr7_2:45872802-45872821 | Msa1059540:intron | 30.0% | |
| !! | CTGTTTTCTGGCAATTTTAT+AGG | + | chr7_2:45872999-45873018 | Msa1059540:intron | 30.0% |
| ! | TTTATAGGTGCAGATTTTCT+TGG | + | chr7_2:45873014-45873033 | Msa1059540:intron | 30.0% |
| TGAAAAATGGTATTAGAGGA+GGG | - | chr7_2:45873578-45873597 | None:intergenic | 30.0% | |
| GAACTGAAAAATGGTATTAG+AGG | - | chr7_2:45873582-45873601 | None:intergenic | 30.0% | |
| ATACAAATTGCCCTAATTTG+GGG | - | chr7_2:45873605-45873624 | None:intergenic | 30.0% | |
| CATACAAATTGCCCTAATTT+GGG | - | chr7_2:45873606-45873625 | None:intergenic | 30.0% | |
| TCATACAAATTGCCCTAATT+TGG | - | chr7_2:45873607-45873626 | None:intergenic | 30.0% | |
| !! | GTTTGAACTCTTTTAAAAGC+TGG | + | chr7_2:45873634-45873653 | Msa1059540:intron | 30.0% |
| !! | CATTAATTTGCTCAAATGAG+AGG | - | chr7_2:45873675-45873694 | None:intergenic | 30.0% |
| TCTATAGCTCAATAAAGAAC+AGG | - | chr7_2:45873698-45873717 | None:intergenic | 30.0% | |
| TCTTGAATTCCGTTGTTTAT+TGG | + | chr7_2:45873937-45873956 | Msa1059540:intron | 30.0% | |
| CTTGAATTCCGTTGTTTATT+GGG | + | chr7_2:45873938-45873957 | Msa1059540:intron | 30.0% | |
| CAAATTGGAATGTCTTTAAG+AGG | + | chr7_2:45873985-45874004 | Msa1059540:intron | 30.0% | |
| ACTTAGACAGATTAAGTTCT+TGG | - | chr7_2:45874030-45874049 | None:intergenic | 30.0% | |
| GAACTTAATCTGTCTAAGTA+CGG | + | chr7_2:45874031-45874050 | Msa1059540:intron | 30.0% | |
| !!! | TTCCACAATTTTAAGATGTC+TGG | + | chr7_2:45874177-45874196 | Msa1059540:intron | 30.0% |
| TACCAGACATCTTAAAATTG+TGG | - | chr7_2:45874182-45874201 | None:intergenic | 30.0% | |
| ! | ATTGTTGGATTTTCAACTGA+TGG | + | chr7_2:45874241-45874260 | Msa1059540:CDS | 30.0% |
| ! | ATGATATTTTCTCATGGTAG+TGG | - | chr7_2:45874278-45874297 | None:intergenic | 30.0% |
| ATTACGATCATTGAACTCAA+AGG | - | chr7_2:45874657-45874676 | None:intergenic | 30.0% | |
| ! | TTATTTTCTCATCTGGATCT+AGG | + | chr7_2:45874792-45874811 | Msa1059540:intron | 30.0% |
| AGCATTAGGCTATGTTATAT+AGG | + | chr7_2:45874851-45874870 | Msa1059540:intron | 30.0% | |
| CTATGTTATATAGGTACGAA+CGG | + | chr7_2:45874860-45874879 | Msa1059540:intron | 30.0% | |
| GATAAAATACCAAAACAGAG+TGG | + | chr7_2:45875008-45875027 | Msa1059540:intron | 30.0% | |
| TAAAATACCAAAACAGAGTG+GGG | + | chr7_2:45875010-45875029 | Msa1059540:intron | 30.0% | |
| ATGAAACAAACGCAAAACAA+AGG | + | chr7_2:45875033-45875052 | Msa1059540:intron | 30.0% | |
| GATCAAGGTTGTTTATTAGA+TGG | - | chr7_2:45875064-45875083 | None:intergenic | 30.0% | |
| !! | CATCTGAGTAATTGCTTTTA+AGG | - | chr7_2:45875354-45875373 | None:intergenic | 30.0% |
| AAAAGCAATTACTCAGATGA+TGG | + | chr7_2:45875355-45875374 | Msa1059540:intron | 30.0% | |
| !! | TTTTGCTACTAAAAGAGCAT+AGG | - | chr7_2:45875597-45875616 | None:intergenic | 30.0% |
| GCTGTCCTAAGATTTAAATT+TGG | + | chr7_2:45875699-45875718 | Msa1059540:intron | 30.0% | |
| AATGTAGGTGGTTATCTTTA+TGG | - | chr7_2:45875884-45875903 | None:intergenic | 30.0% | |
| CTTGCTGAAACAATAAATGT+AGG | - | chr7_2:45875899-45875918 | None:intergenic | 30.0% | |
| ACATTTATTGTTTCAGCAAG+TGG | + | chr7_2:45875899-45875918 | Msa1059540:intron | 30.0% | |
| CATTTATTGTTTCAGCAAGT+GGG | + | chr7_2:45875900-45875919 | Msa1059540:intron | 30.0% | |
| ! | ACCAAAAGTTTGTTCCAAAA+TGG | + | chr7_2:45876252-45876271 | Msa1059540:intron | 30.0% |
| !!! | ACCATTTTGGAACAAACTTT+TGG | - | chr7_2:45876256-45876275 | None:intergenic | 30.0% |
| ! | AAAGTTACAATGCACCATTT+TGG | - | chr7_2:45876269-45876288 | None:intergenic | 30.0% |
| ! | AGGATAATGGTATAAACTCT+AGG | + | chr7_2:45876411-45876430 | Msa1059540:intron | 30.0% |
| !!! | TGTTTCACATGGCTATTTTT+AGG | + | chr7_2:45876439-45876458 | Msa1059540:intron | 30.0% |
| TTGACAATCATGTAAAGTGT+TGG | - | chr7_2:45876516-45876535 | None:intergenic | 30.0% | |
| ! | GTTGGAAATAAAGGTTTTTC+AGG | + | chr7_2:45876607-45876626 | Msa1059540:intron | 30.0% |
| !!! | AAATAAAGGTTTTTCAGGGA+AGG | + | chr7_2:45876612-45876631 | Msa1059540:intron | 30.0% |
| !!! | AATAAAGGTTTTTCAGGGAA+GGG | + | chr7_2:45876613-45876632 | Msa1059540:intron | 30.0% |
| TGGAAGAAATAGAAGACATT+GGG | + | chr7_2:45876724-45876743 | Msa1059540:intron | 30.0% | |
| ! | TACAAAATCCTCCTTATTTG+GGG | + | chr7_2:45876783-45876802 | Msa1059540:intron | 30.0% |
| CTGAAAATGACTTTCAATCT+AGG | + | chr7_2:45877110-45877129 | Msa1059540:intron | 30.0% | |
| ! | CAGATGAAAGTATGTTTCAT+TGG | + | chr7_2:45877170-45877189 | Msa1059540:intron | 30.0% |
| AGATGTATAATTGGGAAGTT+TGG | + | chr7_2:45877205-45877224 | Msa1059540:intron | 30.0% | |
| !!! | CTTTTTTCTTCTGTGGTTTT+AGG | + | chr7_2:45877342-45877361 | Msa1059540:intron | 30.0% |
| ! | AAGCAATTACTATTTTCCTC+AGG | - | chr7_2:45877377-45877396 | None:intergenic | 30.0% |
| ! | GGTCTTATGGTATGATTATT+TGG | + | chr7_2:45877443-45877462 | Msa1059540:intron | 30.0% |
| TCCATTTGACAGAAAAAAGT+TGG | + | chr7_2:45877519-45877538 | Msa1059540:intron | 30.0% | |
| TATTCACCATTTAATGAGTC+TGG | + | chr7_2:45877705-45877724 | Msa1059540:intron | 30.0% | |
| AGAACATGATATGCAAAACT+TGG | - | chr7_2:45877775-45877794 | None:intergenic | 30.0% | |
| TTTGTCTTACTCATATCACT+TGG | + | chr7_2:45878007-45878026 | Msa1059540:intron | 30.0% | |
| !! | TACTTTCTTTGGTTTGATTG+CGG | + | chr7_2:45878253-45878272 | Msa1059540:intron | 30.0% |
| ! | TTACCTTTTTCCCTATGTTT+TGG | + | chr7_2:45878402-45878421 | Msa1059540:intron | 30.0% |
| CATTTAAGCATCCAAAACAT+AGG | - | chr7_2:45878416-45878435 | None:intergenic | 30.0% | |
| !!! | CCATTTGTATTTTTGAGTTC+TGG | - | chr7_2:45878725-45878744 | None:intergenic | 30.0% |
| CCAGAACTCAAAAATACAAA+TGG | + | chr7_2:45878722-45878741 | Msa1059540:CDS | 30.0% | |
| CTCAAAAATACAAATGGATC+GGG | + | chr7_2:45878728-45878747 | Msa1059540:CDS | 30.0% | |
| TAAGTAGATGAAGAAACTGT+TGG | - | chr7_2:45878781-45878800 | None:intergenic | 30.0% | |
| CTACTTAGATTGTCTAATGA+AGG | + | chr7_2:45878794-45878813 | Msa1059540:CDS | 30.0% | |
| ATGAAGGACTTGAAATAAAC+CGG | + | chr7_2:45878810-45878829 | Msa1059540:CDS | 30.0% | |
| TAGGAATTCTTCACTTAACA+AGG | - | chr7_2:45879120-45879139 | None:intergenic | 30.0% | |
| TTAGATAGAGATGGGAAAGA+AGG | - | chr7_2:45871879-45871898 | None:intergenic | 35.0% | |
| ! | AAATGGGTTCGAATTTAAGG+AGG | - | chr7_2:45871915-45871934 | None:intergenic | 35.0% |
| ! | TGGAAATGGGTTCGAATTTA+AGG | - | chr7_2:45871918-45871937 | None:intergenic | 35.0% |
| ATGTTGAAACTTCCATGCAA+TGG | + | chr7_2:45872005-45872024 | Msa1059540:CDS | 35.0% | |
| TGTTGAAACTTCCATGCAAT+GGG | + | chr7_2:45872006-45872025 | Msa1059540:CDS | 35.0% | |
| TAAAGGATTCCGTTCTACAA+AGG | + | chr7_2:45872106-45872125 | Msa1059540:CDS | 35.0% | |
| ATTGTTAGGAGCTATGAAGT+TGG | + | chr7_2:45872266-45872285 | Msa1059540:CDS | 35.0% | |
| ACACACCCATCATTAACAAT+TGG | - | chr7_2:45872395-45872414 | None:intergenic | 35.0% | |
| TAAGAACTAACCACTGTGTA+TGG | + | chr7_2:45872882-45872901 | Msa1059540:intron | 35.0% | |
| GATTCATTTCTATGCACTGA+CGG | - | chr7_2:45872946-45872965 | None:intergenic | 35.0% | |
| !!! | AGGTTTTGTTTGCTGTTTTC+TGG | + | chr7_2:45872987-45873006 | Msa1059540:intron | 35.0% |
| CTGAAAAATGGTATTAGAGG+AGG | - | chr7_2:45873579-45873598 | None:intergenic | 35.0% | |
| AATTTGGGGGAACTGAAAAA+TGG | - | chr7_2:45873591-45873610 | None:intergenic | 35.0% | |
| !! | TTTTTCAGTTCCCCCAAATT+AGG | + | chr7_2:45873591-45873610 | Msa1059540:intron | 35.0% |
| ! | TTTTCAGTTCCCCCAAATTA+GGG | + | chr7_2:45873592-45873611 | Msa1059540:intron | 35.0% |
| TACAAATTGCCCTAATTTGG+GGG | - | chr7_2:45873604-45873623 | None:intergenic | 35.0% | |
| CTATAGATTGCTGATATTGC+AGG | + | chr7_2:45873711-45873730 | Msa1059540:intron | 35.0% | |
| CTAAACTTCTCAATCCAGAA+AGG | - | chr7_2:45873743-45873762 | None:intergenic | 35.0% | |
| CTTTCTGGATTGAGAAGTTT+AGG | + | chr7_2:45873741-45873760 | Msa1059540:intron | 35.0% | |
| !! | AAAAAATGACGGACTACTTC+TGG | + | chr7_2:45873860-45873879 | Msa1059540:intron | 35.0% |
| GTCATGTTCTAACGTGTTAT+TGG | - | chr7_2:45874089-45874108 | None:intergenic | 35.0% | |
| !!! | TCTGGTAACTTTTTTGTTGC+AGG | + | chr7_2:45874195-45874214 | Msa1059540:intron | 35.0% |
| TGTAATCATGCTCAGATTGT+TGG | + | chr7_2:45874226-45874245 | Msa1059540:CDS | 35.0% | |
| ATGTTGTTGAGATAGAGACA+TGG | + | chr7_2:45874430-45874449 | Msa1059540:CDS | 35.0% | |
| TACGCAACGAATGAAGTAAT+CGG | + | chr7_2:45874504-45874523 | Msa1059540:CDS | 35.0% | |
| CACGACCATCCTAATTTAAA+AGG | - | chr7_2:45874553-45874572 | None:intergenic | 35.0% | |
| ! | CTTTTAAATTAGGATGGTCG+TGG | + | chr7_2:45874551-45874570 | Msa1059540:intron | 35.0% |
| ! | TAGTGTCATTACAAGTGTCA+GGG | - | chr7_2:45874726-45874745 | None:intergenic | 35.0% |
| ! | ATAGTGTCATTACAAGTGTC+AGG | - | chr7_2:45874727-45874746 | None:intergenic | 35.0% |
| TCTAGGCTGATAATTTCTTG+TGG | + | chr7_2:45874809-45874828 | Msa1059540:intron | 35.0% | |
| ATAACATAGCCTAATGCTGA+TGG | - | chr7_2:45874849-45874868 | None:intergenic | 35.0% | |
| ATACAGCATGATATGGGTAT+GGG | + | chr7_2:45874883-45874902 | Msa1059540:intron | 35.0% | |
| ATAAAAATGGGCAAAACAGG+CGG | + | chr7_2:45874984-45875003 | Msa1059540:intron | 35.0% | |
| TACATGTGCACTTCAATAAG+AGG | - | chr7_2:45875089-45875108 | None:intergenic | 35.0% | |
| ! | ACACCCAAAAAAAAGTGCAT+AGG | + | chr7_2:45875116-45875135 | Msa1059540:intron | 35.0% |
| ! | CACCCAAAAAAAAGTGCATA+GGG | + | chr7_2:45875117-45875136 | Msa1059540:intron | 35.0% |
| !!! | GTCCCTATGCACTTTTTTTT+GGG | - | chr7_2:45875122-45875141 | None:intergenic | 35.0% |
| !!! | AGTCCCTATGCACTTTTTTT+TGG | - | chr7_2:45875123-45875142 | None:intergenic | 35.0% |
| GCTGAAACAATAAATGTAGG+TGG | - | chr7_2:45875896-45875915 | None:intergenic | 35.0% | |
| !! | TTTTATTTAGAATCAGGCGG+AGG | + | chr7_2:45876286-45876305 | Msa1059540:intron | 35.0% |
| CTAGTCAATGGCATAACTAA+TGG | - | chr7_2:45876356-45876375 | None:intergenic | 35.0% | |
| ! | CATTAGTTATGCCATTGACT+AGG | + | chr7_2:45876354-45876373 | Msa1059540:intron | 35.0% |
| ! | ATGCCATTGACTAGGTAATA+CGG | + | chr7_2:45876362-45876381 | Msa1059540:intron | 35.0% |
| ! | TCTAGGATACATGTTTCACA+TGG | + | chr7_2:45876428-45876447 | Msa1059540:intron | 35.0% |
| CTTTGATATCATAAAGTCCC+AGG | + | chr7_2:45876471-45876490 | Msa1059540:intron | 35.0% | |
| TGAATCAAGTTTCTCTAGCT+TGG | + | chr7_2:45876557-45876576 | Msa1059540:intron | 35.0% | |
| !!! | ATAAAGGTTTTTCAGGGAAG+GGG | + | chr7_2:45876614-45876633 | Msa1059540:intron | 35.0% |
| !!! | GAGGGTTTTGATTAAAAGGA+AGG | + | chr7_2:45876695-45876714 | Msa1059540:intron | 35.0% |
| GTGGAAGAAATAGAAGACAT+TGG | + | chr7_2:45876723-45876742 | Msa1059540:intron | 35.0% | |
| AAGAAATAGAAGACATTGGG+AGG | + | chr7_2:45876727-45876746 | Msa1059540:intron | 35.0% | |
| !!! | TTTTAGTTCCCCAAATAAGG+AGG | - | chr7_2:45876794-45876813 | None:intergenic | 35.0% |
| TACAAATGCAGCACTCATTA+TGG | + | chr7_2:45877145-45877164 | Msa1059540:intron | 35.0% | |
| ACAAATGCAGCACTCATTAT+GGG | + | chr7_2:45877146-45877165 | Msa1059540:intron | 35.0% | |
| !!! | TTTCTTCTGTGGTTTTAGGT+TGG | + | chr7_2:45877346-45877365 | Msa1059540:intron | 35.0% |
| !! | CAATTCTAGACTTGGTCTTA+TGG | + | chr7_2:45877430-45877449 | Msa1059540:CDS | 35.0% |
| !!! | GCCAACTTTTTTCTGTCAAA+TGG | - | chr7_2:45877523-45877542 | None:intergenic | 35.0% |
| ATCTTCTAGGCTGCAATATT+GGG | - | chr7_2:45877588-45877607 | None:intergenic | 35.0% | |
| GTTAACAATGTCGCCTATAT+TGG | + | chr7_2:45877631-45877650 | Msa1059540:CDS | 35.0% | |
| ! | GAAAGTATATCCTATGGTGT+TGG | - | chr7_2:45877744-45877763 | None:intergenic | 35.0% |
| GACAAATACTCTTCCAATAC+AGG | - | chr7_2:45877993-45878012 | None:intergenic | 35.0% | |
| TAGTCAAACTCTTAGAAGTG+AGG | - | chr7_2:45878090-45878109 | None:intergenic | 35.0% | |
| !! | GTACTGATTCACAGTTAAAC+CGG | - | chr7_2:45878236-45878255 | None:intergenic | 35.0% |
| CTGTGAATCAGTACTTTCTT+TGG | + | chr7_2:45878242-45878261 | Msa1059540:intron | 35.0% | |
| CATCCAAAACATAGGGAAAA+AGG | - | chr7_2:45878408-45878427 | None:intergenic | 35.0% | |
| ! | CTTTTAGATATGTCGTGTGT+TGG | + | chr7_2:45878531-45878550 | Msa1059540:intron | 35.0% |
| TAGCTATCGATGATTTCTTG+AGG | - | chr7_2:45878599-45878618 | None:intergenic | 35.0% | |
| ! | AGTTGATTCACTAACAAGTG+TGG | + | chr7_2:45878673-45878692 | Msa1059540:CDS | 35.0% |
| TGAAGGACTTGAAATAAACC+GGG | + | chr7_2:45878811-45878830 | Msa1059540:CDS | 35.0% | |
| AACAGAATGGAGAAAAAAGG+CGG | + | chr7_2:45878838-45878857 | Msa1059540:CDS | 35.0% | |
| TGTTGAGAGAAGTTTACTCA+AGG | - | chr7_2:45878887-45878906 | None:intergenic | 35.0% | |
| AGGAAACATTACAAGCTCAT+AGG | - | chr7_2:45879100-45879119 | None:intergenic | 35.0% | |
| GTTGAAACTTCCATGCAATG+GGG | + | chr7_2:45872007-45872026 | Msa1059540:CDS | 40.0% | |
| ATGACTCAATGCGGGTTTAT+GGG | + | chr7_2:45872047-45872066 | Msa1059540:CDS | 40.0% | |
| AACCATTGCTAATCTCTTGC+AGG | + | chr7_2:45872313-45872332 | Msa1059540:CDS | 40.0% | |
| AACCTGCAAGAGATTAGCAA+TGG | - | chr7_2:45872318-45872337 | None:intergenic | 40.0% | |
| ! | TGTTTTGTGTGACAATGGCA+AGG | + | chr7_2:45872534-45872553 | Msa1059540:intron | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | + | chr7_2:45873347-45873366 | Msa1059540:intron | 40.0% |
| TTTAGAGGGCTGAGATTAGA+GGG | + | chr7_2:45873385-45873404 | Msa1059540:intron | 40.0% | |
| ! | TGGTATTAGAGGAGGGTTTT+GGG | - | chr7_2:45873571-45873590 | None:intergenic | 40.0% |
| ! | ATGGTATTAGAGGAGGGTTT+TGG | - | chr7_2:45873572-45873591 | None:intergenic | 40.0% |
| !!! | GGTAACTTTTTTGTTGCAGG+AGG | + | chr7_2:45874198-45874217 | Msa1059540:intron | 40.0% |
| !!! | ACTTTTTTGTTGCAGGAGGT+TGG | + | chr7_2:45874202-45874221 | Msa1059540:intron | 40.0% |
| AAGTCTACAAATACCCTGCA+TGG | + | chr7_2:45874329-45874348 | Msa1059540:CDS | 40.0% | |
| AGAACAAAACCAACCATGCA+GGG | - | chr7_2:45874345-45874364 | None:intergenic | 40.0% | |
| AAGAACAAAACCAACCATGC+AGG | - | chr7_2:45874346-45874365 | None:intergenic | 40.0% | |
| !! | GGTGCTGAGTTTTTCTGATA+TGG | + | chr7_2:45874629-45874648 | Msa1059540:intron | 40.0% |
| GAACGGATACAGCATGATAT+GGG | + | chr7_2:45874877-45874896 | Msa1059540:intron | 40.0% | |
| GATACAGCATGATATGGGTA+TGG | + | chr7_2:45874882-45874901 | Msa1059540:intron | 40.0% | |
| CTTCAATAAGAGGACGATCA+AGG | - | chr7_2:45875079-45875098 | None:intergenic | 40.0% | |
| GTGAAGACTTGAACAGTTCA+AGG | - | chr7_2:45875208-45875227 | None:intergenic | 40.0% | |
| AGTCTTCACGAAGATAAGTC+TGG | + | chr7_2:45875219-45875238 | Msa1059540:intron | 40.0% | |
| GTCTTCACGAAGATAAGTCT+GGG | + | chr7_2:45875220-45875239 | Msa1059540:intron | 40.0% | |
| !! | GTCTTAATACCTCTGAAGCA+CGG | - | chr7_2:45875569-45875588 | None:intergenic | 40.0% |
| CAAGTGGGTAATGATGAATG+AGG | + | chr7_2:45875915-45875934 | Msa1059540:CDS | 40.0% | |
| TAATGATGAATGAGGACACG+AGG | + | chr7_2:45875923-45875942 | Msa1059540:CDS | 40.0% | |
| ! | GAACATCGTCAGACACTTTT+TGG | - | chr7_2:45875954-45875973 | None:intergenic | 40.0% |
| ! | TGCCATTGACTAGGTAATAC+GGG | + | chr7_2:45876363-45876382 | Msa1059540:intron | 40.0% |
| AGGCACTCATCATAGGATAA+TGG | + | chr7_2:45876398-45876417 | Msa1059540:intron | 40.0% | |
| GATTGTCAAAGCTTGTGCTT+TGG | + | chr7_2:45876527-45876546 | Msa1059540:intron | 40.0% | |
| !! | AGGTTGACTTAGGCTTTGTT+TGG | + | chr7_2:45876640-45876659 | Msa1059540:intron | 40.0% |
| !! | GGTTGACTTAGGCTTTGTTT+GGG | + | chr7_2:45876641-45876660 | Msa1059540:intron | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr7_2:45876648-45876667 | Msa1059540:intron | 40.0% |
| !!! | AGGGGAGGGTTTTGATTAAA+AGG | + | chr7_2:45876691-45876710 | Msa1059540:intron | 40.0% |
| GATTAAAAGGAAGGAGCAAG+TGG | + | chr7_2:45876704-45876723 | Msa1059540:intron | 40.0% | |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr7_2:45873347-45873366 | None:intergenic | 40.0% |
| AAACTCCCAAACAAAGCCTT+AGG | + | chr7_2:45877023-45877042 | Msa1059540:intron | 40.0% | |
| AACTCCCAAACAAAGCCTTA+GGG | + | chr7_2:45877024-45877043 | Msa1059540:intron | 40.0% | |
| TAATTAGTGCATCACCCCTA+AGG | - | chr7_2:45877042-45877061 | None:intergenic | 40.0% | |
| !!! | TTTTAGGTTGGCAATTCCTG+AGG | + | chr7_2:45877358-45877377 | Msa1059540:intron | 40.0% |
| TCTTCTAGGCTGCAATATTG+GGG | - | chr7_2:45877587-45877606 | None:intergenic | 40.0% | |
| GATCTTCTAGGCTGCAATAT+TGG | - | chr7_2:45877589-45877608 | None:intergenic | 40.0% | |
| !! | ATGCTGATTCATGTCGAGAT+CGG | - | chr7_2:45877611-45877630 | None:intergenic | 40.0% |
| ACAATGTCGCCTATATTGGA+TGG | + | chr7_2:45877635-45877654 | Msa1059540:CDS | 40.0% | |
| CAATGTCGCCTATATTGGAT+GGG | + | chr7_2:45877636-45877655 | Msa1059540:CDS | 40.0% | |
| ! | AGAGTGCCAGACTCATTAAA+TGG | - | chr7_2:45877714-45877733 | None:intergenic | 40.0% |
| ATTTAATGAGTCTGGCACTC+TGG | + | chr7_2:45877713-45877732 | Msa1059540:intron | 40.0% | |
| AACTAGATAACAGCATGGGA+TGG | - | chr7_2:45877918-45877937 | None:intergenic | 40.0% | |
| ACACATACACACAGAAGGTA+GGG | - | chr7_2:45877961-45877980 | None:intergenic | 40.0% | |
| AACACATACACACAGAAGGT+AGG | - | chr7_2:45877962-45877981 | None:intergenic | 40.0% | |
| CATCAACACATACACACAGA+AGG | - | chr7_2:45877966-45877985 | None:intergenic | 40.0% | |
| CTTCTGTGTGTATGTGTTGA+TGG | + | chr7_2:45877964-45877983 | Msa1059540:intron | 40.0% | |
| TCAAACTCTTAGAAGTGAGG+CGG | - | chr7_2:45878087-45878106 | None:intergenic | 40.0% | |
| ACTGCTTTAACCACTCAAAC+CGG | - | chr7_2:45878285-45878304 | None:intergenic | 40.0% | |
| AAAGCAGTTGAACCATGATC+TGG | + | chr7_2:45878297-45878316 | Msa1059540:intron | 40.0% | |
| TCACTTATTCGATGTCCAGT+TGG | + | chr7_2:45878325-45878344 | Msa1059540:intron | 40.0% | |
| GCATTCTCGTCTGTAATCTA+AGG | - | chr7_2:45878639-45878658 | None:intergenic | 40.0% | |
| AAATGGATCGGGTAAAGCAA+TGG | + | chr7_2:45878739-45878758 | Msa1059540:CDS | 40.0% | |
| GAAGGACTTGAAATAAACCG+GGG | + | chr7_2:45878812-45878831 | Msa1059540:CDS | 40.0% | |
| AAGGACTTGAAATAAACCGG+GGG | + | chr7_2:45878813-45878832 | Msa1059540:CDS | 40.0% | |
| GCGAACAGAATGGAGAAAAA+AGG | + | chr7_2:45878835-45878854 | Msa1059540:CDS | 40.0% | |
| TACAAGCTCATAGGTGTTTG+TGG | - | chr7_2:45879091-45879110 | None:intergenic | 40.0% | |
| GAGATGGGAAAGAAGGAATG+TGG | - | chr7_2:45871872-45871891 | None:intergenic | 45.0% | |
| ATTGAGTCATGAGGTGAACC+CGG | - | chr7_2:45872037-45872056 | None:intergenic | 45.0% | |
| GTTCACCTCATGACTCAATG+CGG | + | chr7_2:45872038-45872057 | Msa1059540:CDS | 45.0% | |
| TTCACCTCATGACTCAATGC+GGG | + | chr7_2:45872039-45872058 | Msa1059540:CDS | 45.0% | |
| TAAACCCGCATTGAGTCATG+AGG | - | chr7_2:45872046-45872065 | None:intergenic | 45.0% | |
| CATGACTCAATGCGGGTTTA+TGG | + | chr7_2:45872046-45872065 | Msa1059540:CDS | 45.0% | |
| !! | CGACCCACTTCATTTTTCAC+CGG | + | chr7_2:45872071-45872090 | Msa1059540:CDS | 45.0% |
| GGAATCCTTTAACTGAGCTC+CGG | - | chr7_2:45872097-45872116 | None:intergenic | 45.0% | |
| TGAACCGGATATTGGGAGTT+TGG | + | chr7_2:45872184-45872203 | Msa1059540:CDS | 45.0% | |
| TTCGCCAAACTCCCAATATC+CGG | - | chr7_2:45872191-45872210 | None:intergenic | 45.0% | |
| ATATTGGGAGTTTGGCGAAC+CGG | + | chr7_2:45872192-45872211 | Msa1059540:CDS | 45.0% | |
| !! | GACGCTGTTTTGTGTGACAA+TGG | + | chr7_2:45872529-45872548 | Msa1059540:intron | 45.0% |
| TGGCACTTCAACAATGTCAC+CGG | - | chr7_2:45872692-45872711 | None:intergenic | 45.0% | |
| ! | GACATTGTTGAAGTGCCAAG+TGG | + | chr7_2:45872694-45872713 | Msa1059540:intron | 45.0% |
| TCAAGTCACACCATACACAG+TGG | - | chr7_2:45872895-45872914 | None:intergenic | 45.0% | |
| ! | TTGGCACTGAGATTCATGCA+TGG | + | chr7_2:45873033-45873052 | Msa1059540:intron | 45.0% |
| TATTGCTAACTAGTGCCCCT+AGG | + | chr7_2:45873182-45873201 | Msa1059540:intron | 45.0% | |
| ATTGCTAACTAGTGCCCCTA+GGG | + | chr7_2:45873183-45873202 | Msa1059540:intron | 45.0% | |
| !! | AATGCTAAAGAGTGCCCTAG+GGG | - | chr7_2:45873200-45873219 | None:intergenic | 45.0% |
| !! | GAATGCTAAAGAGTGCCCTA+GGG | - | chr7_2:45873201-45873220 | None:intergenic | 45.0% |
| !! | AGAATGCTAAAGAGTGCCCT+AGG | - | chr7_2:45873202-45873221 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr7_2:45873351-45873370 | Msa1059540:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr7_2:45873352-45873371 | Msa1059540:intron | 45.0% |
| ! | CTTTAGAGGGCTGAGATTAG+AGG | + | chr7_2:45873384-45873403 | Msa1059540:intron | 45.0% |
| ATTGCAGGTCTACTCCTTTC+TGG | + | chr7_2:45873726-45873745 | Msa1059540:intron | 45.0% | |
| TTCTGGTGATCACTGTTTGC+TGG | + | chr7_2:45873877-45873896 | Msa1059540:intron | 45.0% | |
| CTACAAATACCCTGCATGGT+TGG | + | chr7_2:45874333-45874352 | Msa1059540:intron | 45.0% | |
| CTCAACAACATCACTCCTGT+TGG | - | chr7_2:45874421-45874440 | None:intergenic | 45.0% | |
| AAGTAATCGGAAGAGCAACG+AGG | + | chr7_2:45874517-45874536 | Msa1059540:CDS | 45.0% | |
| GTCATTACAAGTGTCAGGGT+CGG | - | chr7_2:45874722-45874741 | None:intergenic | 45.0% | |
| AATGCTGATGGAGTGATGGT+TGG | - | chr7_2:45874837-45874856 | None:intergenic | 45.0% | |
| ACCATCACTCCATCAGCATT+AGG | + | chr7_2:45874837-45874856 | Msa1059540:intron | 45.0% | |
| CGAACGGATACAGCATGATA+TGG | + | chr7_2:45874876-45874895 | Msa1059540:intron | 45.0% | |
| ! | GTTTCATCCCCACTCTGTTT+TGG | - | chr7_2:45875020-45875039 | None:intergenic | 45.0% |
| TTTGAATGGGTACGAGCCAA+CGG | - | chr7_2:45875466-45875485 | None:intergenic | 45.0% | |
| ! | GTTGGTTGAAGTACCAGTAC+AGG | - | chr7_2:45875537-45875556 | None:intergenic | 45.0% |
| TTTACTGTCCTCGAGAGCTA+AGG | + | chr7_2:45875989-45876008 | Msa1059540:CDS | 45.0% | |
| TGCAACGCACTGTCAACAAA+GGG | - | chr7_2:45876031-45876050 | None:intergenic | 45.0% | |
| TTGCAACGCACTGTCAACAA+AGG | - | chr7_2:45876032-45876051 | None:intergenic | 45.0% | |
| !! | TTGAGTTGAGTCCACGCAAA+GGG | + | chr7_2:45876149-45876168 | Msa1059540:intron | 45.0% |
| CAATGGCATAACTAATGGCC+TGG | - | chr7_2:45876351-45876370 | None:intergenic | 45.0% | |
| ! | GCCATTGACTAGGTAATACG+GGG | + | chr7_2:45876364-45876383 | Msa1059540:intron | 45.0% |
| ! | ACTCATGAGGCACTCATCAT+AGG | + | chr7_2:45876391-45876410 | Msa1059540:intron | 45.0% |
| !! | CTCTAGCTTGGCCTTTTTGA+AGG | + | chr7_2:45876569-45876588 | Msa1059540:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+AGG | + | chr7_2:45873352-45873371 | Msa1059540:intron | 45.0% |
| ATAGAAGACATTGGGAGGAG+AGG | + | chr7_2:45876732-45876751 | Msa1059540:intron | 45.0% | |
| TAGAAGACATTGGGAGGAGA+GGG | + | chr7_2:45876733-45876752 | Msa1059540:intron | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr7_2:45873352-45873371 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr7_2:45873351-45873370 | None:intergenic | 45.0% |
| ACTCCCAAACAAAGCCTTAG+GGG | + | chr7_2:45877025-45877044 | Msa1059540:intron | 45.0% | |
| !! | TCACCCCTAAGGCTTTGTTT+GGG | - | chr7_2:45877031-45877050 | None:intergenic | 45.0% |
| !! | ATCACCCCTAAGGCTTTGTT+TGG | - | chr7_2:45877032-45877051 | None:intergenic | 45.0% |
| ! | TGAGCAGGATCTCCCAATTT+TGG | - | chr7_2:45877410-45877429 | None:intergenic | 45.0% |
| ! | CCAAGTCTAGAATTGTGAGC+AGG | - | chr7_2:45877425-45877444 | None:intergenic | 45.0% |
| CCTGCTCACAATTCTAGACT+TGG | + | chr7_2:45877422-45877441 | Msa1059540:CDS | 45.0% | |
| ATTGGGGGGAAAATGTGAGA+AGG | - | chr7_2:45877571-45877590 | None:intergenic | 45.0% | |
| TTCTAGGCTGCAATATTGGG+GGG | - | chr7_2:45877585-45877604 | None:intergenic | 45.0% | |
| CTTCTAGGCTGCAATATTGG+GGG | - | chr7_2:45877586-45877605 | None:intergenic | 45.0% | |
| ATGTCGAGATCGGATCTTCT+AGG | - | chr7_2:45877601-45877620 | None:intergenic | 45.0% | |
| CTCAAGCACCCATCCAATAT+AGG | - | chr7_2:45877647-45877666 | None:intergenic | 45.0% | |
| CTATATTGGATGGGTGCTTG+AGG | + | chr7_2:45877645-45877664 | Msa1059540:CDS | 45.0% | |
| TCTGGATCTACCAACACCAT+AGG | + | chr7_2:45877731-45877750 | Msa1059540:intron | 45.0% | |
| ! | GTGTTGATGGATGCCTGTAT+TGG | + | chr7_2:45877977-45877996 | Msa1059540:intron | 45.0% |
| !! | TTTTAAAAACCAACCGGGGC+TGG | + | chr7_2:45878205-45878224 | Msa1059540:intron | 45.0% |
| GGTTTGATTGCGGTTCATTC+CGG | + | chr7_2:45878263-45878282 | Msa1059540:intron | 45.0% | |
| TAAGTGAGACCTCCAGATCA+TGG | - | chr7_2:45878312-45878331 | None:intergenic | 45.0% | |
| !!! | TTATTTTTTAAAATTATTAC+CGG | + | chr7_2:45872587-45872606 | Msa1059540:intron | 5.0% |
| !! | TTAATTAATTAATATAAACA+AGG | - | chr7_2:45873260-45873279 | None:intergenic | 5.0% |
| !! | AAATATAAAAATATAGTTAA+TGG | + | chr7_2:45873286-45873305 | Msa1059540:intron | 5.0% |
| !! | TATAATATAGATAATAAAAA+TGG | + | chr7_2:45874971-45874990 | Msa1059540:intron | 5.0% |
| !! | ATAATATAGATAATAAAAAT+GGG | + | chr7_2:45874972-45874991 | Msa1059540:intron | 5.0% |
| TGTGGCACGTGTTCAAGTGT+GGG | - | chr7_2:45871854-45871873 | None:intergenic | 50.0% | |
| ATGTGGCACGTGTTCAAGTG+TGG | - | chr7_2:45871855-45871874 | None:intergenic | 50.0% | |
| GAAACTTCCATGCAATGGGG+TGG | + | chr7_2:45872010-45872029 | Msa1059540:CDS | 50.0% | |
| CGGCCGGTGAAAAATGAAGT+GGG | - | chr7_2:45872077-45872096 | None:intergenic | 50.0% | |
| !! | CCACTTCATTTTTCACCGGC+CGG | + | chr7_2:45872075-45872094 | Msa1059540:CDS | 50.0% |
| CCGGATACGCCTTTGTAGAA+CGG | - | chr7_2:45872118-45872137 | None:intergenic | 50.0% | |
| ! | CCGTTCTACAAAGGCGTATC+CGG | + | chr7_2:45872115-45872134 | Msa1059540:CDS | 50.0% |
| ! | TACAAAGGCGTATCCGGTTC+AGG | + | chr7_2:45872121-45872140 | Msa1059540:CDS | 50.0% |
| ! | AACCGGGTTGAACCGGATAT+TGG | + | chr7_2:45872176-45872195 | Msa1059540:CDS | 50.0% |
| ! | ACCGGGTTGAACCGGATATT+GGG | + | chr7_2:45872177-45872196 | Msa1059540:CDS | 50.0% |
| TCCCAATATCCGGTTCAACC+CGG | - | chr7_2:45872181-45872200 | None:intergenic | 50.0% | |
| CTTGGGAGCTTATCTGAGGA+TGG | + | chr7_2:45872221-45872240 | Msa1059540:CDS | 50.0% | |
| TGTGTGACAATGGCAAGGCA+CGG | + | chr7_2:45872539-45872558 | Msa1059540:intron | 50.0% | |
| ! | ATTACCGGTGTCAGACTCAG+AGG | + | chr7_2:45872602-45872621 | Msa1059540:intron | 50.0% |
| !! | AGAGGTGTCAGTGTTGTGTC+CGG | + | chr7_2:45872620-45872639 | Msa1059540:intron | 50.0% |
| CTGAGATTCATGCATGGTCG+AGG | + | chr7_2:45873039-45873058 | Msa1059540:intron | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr7_2:45873350-45873369 | Msa1059540:intron | 50.0% |
| TTTGGGAGTTTGGAGGGGAA+GGG | + | chr7_2:45873357-45873376 | Msa1059540:intron | 50.0% | |
| ! | GAGACATGGTGTCAAGCAGA+AGG | + | chr7_2:45874444-45874463 | Msa1059540:CDS | 50.0% |
| ! | CATGGTGTCAAGCAGAAGGA+CGG | + | chr7_2:45874448-45874467 | Msa1059540:CDS | 50.0% |
| ! | ATGGTGTCAAGCAGAAGGAC+GGG | + | chr7_2:45874449-45874468 | Msa1059540:CDS | 50.0% |
| GCCTAATGCTGATGGAGTGA+TGG | - | chr7_2:45874841-45874860 | None:intergenic | 50.0% | |
| GGCATGATGTGGGTACAGAT+GGG | - | chr7_2:45875439-45875458 | None:intergenic | 50.0% | |
| CAACGGAAACGGCATGATGT+GGG | - | chr7_2:45875449-45875468 | None:intergenic | 50.0% | |
| TACCAGTACAGGTACAGCAC+GGG | - | chr7_2:45875526-45875545 | None:intergenic | 50.0% | |
| GTACCAGTACAGGTACAGCA+CGG | - | chr7_2:45875527-45875546 | None:intergenic | 50.0% | |
| GAAGCACGGATACACTGAGT+TGG | - | chr7_2:45875555-45875574 | None:intergenic | 50.0% | |
| TCAGTGTATCCGTGCTTCAG+AGG | + | chr7_2:45875557-45875576 | Msa1059540:intron | 50.0% | |
| ATGAAGCTCTTGCGAAAGCG+AGG | + | chr7_2:45875735-45875754 | Msa1059540:intron | 50.0% | |
| !! | CTTGAGTTGAGTCCACGCAA+AGG | + | chr7_2:45876148-45876167 | Msa1059540:intron | 50.0% |
| ! | TGAGTTGAGTCCACGCAAAG+GGG | + | chr7_2:45876150-45876169 | Msa1059540:intron | 50.0% |
| TTTGTCTTGAGCTGCAGTCC+AGG | + | chr7_2:45876330-45876349 | Msa1059540:intron | 50.0% | |
| GCCCCGTATTACCTAGTCAA+TGG | - | chr7_2:45876368-45876387 | None:intergenic | 50.0% | |
| ! | AATACGGGGCATCACTCATG+AGG | + | chr7_2:45876378-45876397 | Msa1059540:intron | 50.0% |
| !!! | GTTTTTCAGGGAAGGGGTGT+AGG | + | chr7_2:45876620-45876639 | Msa1059540:intron | 50.0% |
| ! | GAAGGGGTGTAGGTTGACTT+AGG | + | chr7_2:45876630-45876649 | Msa1059540:intron | 50.0% |
| TGTTTGGGAGTTTGGAGAGG+AGG | + | chr7_2:45876656-45876675 | Msa1059540:intron | 50.0% | |
| GTTTGGGAGTTTGGAGAGGA+GGG | + | chr7_2:45876657-45876676 | Msa1059540:intron | 50.0% | |
| TTTGGGAGTTTGGAGAGGAG+GGG | + | chr7_2:45876658-45876677 | Msa1059540:intron | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr7_2:45873350-45873369 | None:intergenic | 50.0% |
| GGCGGAACACTAAAATGTGC+TGG | - | chr7_2:45877550-45877569 | None:intergenic | 50.0% | |
| TCTCGACTGCGTGTCTATCT+TGG | + | chr7_2:45877882-45877901 | Msa1059540:intron | 50.0% | |
| GCAGTTGAACCATGATCTGG+AGG | + | chr7_2:45878300-45878319 | Msa1059540:intron | 50.0% | |
| ! | ACAAGTGTGGAAGCACGTGA+AGG | + | chr7_2:45878686-45878705 | Msa1059540:CDS | 50.0% |
| TTCCATGCAATGGGGTGGAC+CGG | + | chr7_2:45872015-45872034 | Msa1059540:CDS | 55.0% | |
| CCGGCCGGTGAAAAATGAAG+TGG | - | chr7_2:45872078-45872097 | None:intergenic | 55.0% | |
| TCCTTTAACTGAGCTCCGGC+CGG | - | chr7_2:45872093-45872112 | None:intergenic | 55.0% | |
| TCAGGCTGTAGCGTCAGCTA+AGG | + | chr7_2:45872139-45872158 | Msa1059540:CDS | 55.0% | |
| GCTGTAGCGTCAGCTAAGGA+CGG | + | chr7_2:45872143-45872162 | Msa1059540:CDS | 55.0% | |
| ATAAGCTCCCAAGCCGCAAC+CGG | - | chr7_2:45872214-45872233 | None:intergenic | 55.0% | |
| GACACCTCTGAGTCTGACAC+CGG | - | chr7_2:45872609-45872628 | None:intergenic | 55.0% | |
| CGGGTCTGTTCGCTGAATTG+AGG | - | chr7_2:45873135-45873154 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | + | chr7_2:45873356-45873375 | Msa1059540:intron | 55.0% | |
| AGGGGAAGGGAGGACTTTAG+AGG | + | chr7_2:45873370-45873389 | Msa1059540:intron | 55.0% | |
| GGGGAAGGGAGGACTTTAGA+GGG | + | chr7_2:45873371-45873390 | Msa1059540:intron | 55.0% | |
| AAGTGTCAGGGTCGGACACT+TGG | - | chr7_2:45874714-45874733 | None:intergenic | 55.0% | |
| TGCACGTTCTCACCGCACTT+CGG | + | chr7_2:45875390-45875409 | Msa1059540:intron | 55.0% | |
| CGGACTTGATTGCCGAAGTG+CGG | - | chr7_2:45875405-45875424 | None:intergenic | 55.0% | |
| ACAGATGGGCAAGAGTGAGG+CGG | - | chr7_2:45875425-45875444 | None:intergenic | 55.0% | |
| GGTACAGATGGGCAAGAGTG+AGG | - | chr7_2:45875428-45875447 | None:intergenic | 55.0% | |
| CGGCATGATGTGGGTACAGA+TGG | - | chr7_2:45875440-45875459 | None:intergenic | 55.0% | |
| CCAACGGAAACGGCATGATG+TGG | - | chr7_2:45875450-45875469 | None:intergenic | 55.0% | |
| ! | CCACATCATGCCGTTTCCGT+TGG | + | chr7_2:45875447-45875466 | Msa1059540:intron | 55.0% |
| TGGGTACGAGCCAACGGAAA+CGG | - | chr7_2:45875460-45875479 | None:intergenic | 55.0% | |
| GTACAGCACGGGTACGTATC+AGG | - | chr7_2:45875515-45875534 | None:intergenic | 55.0% | |
| TACCCGTGCTGTACCTGTAC+TGG | + | chr7_2:45875521-45875540 | Msa1059540:intron | 55.0% | |
| TCTTGCGAAAGCGAGGTCCA+TGG | + | chr7_2:45875742-45875761 | Msa1059540:intron | 55.0% | |
| CTGTCCTCGAGAGCTAAGGT+CGG | + | chr7_2:45875993-45876012 | Msa1059540:intron | 55.0% | |
| !! | AGTACCGACCTTAGCTCTCG+AGG | - | chr7_2:45876000-45876019 | None:intergenic | 55.0% |
| GAGTTGAGTCCACGCAAAGG+GGG | + | chr7_2:45876151-45876170 | Msa1059540:intron | 55.0% | |
| ACATTGGGAGGAGAGGGCTT+TGG | + | chr7_2:45876739-45876758 | Msa1059540:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+CGG | - | chr7_2:45877014-45877033 | None:intergenic | 55.0% | |
| GGGGGGAAAATGTGAGAAGG+CGG | - | chr7_2:45877568-45877587 | None:intergenic | 55.0% | |
| TAAACCGGCTAAACCAGCCC+CGG | - | chr7_2:45878221-45878240 | None:intergenic | 55.0% | |
| ! | GCGGTTCATTCCGGTTTGAG+TGG | + | chr7_2:45878272-45878291 | Msa1059540:intron | 55.0% |
| TAAACCGGGGGCGAACAGAA+TGG | + | chr7_2:45878825-45878844 | Msa1059540:CDS | 55.0% | |
| TTCTCCATTCTGTTCGCCCC+CGG | - | chr7_2:45878832-45878851 | None:intergenic | 55.0% | |
| TCCATGCAATGGGGTGGACC+GGG | + | chr7_2:45872016-45872035 | Msa1059540:CDS | 60.0% | |
| ACCGGCCGGAGCTCAGTTAA+AGG | + | chr7_2:45872089-45872108 | Msa1059540:CDS | 60.0% | |
| GCTGACGCTACAGCCTGAAC+CGG | - | chr7_2:45872137-45872156 | None:intergenic | 60.0% | |
| AGCGTCAGCTAAGGACGGTG+CGG | + | chr7_2:45872148-45872167 | Msa1059540:CDS | 60.0% | |
| ! | GGTGGTGAACCGGGTTGAAC+CGG | + | chr7_2:45872169-45872188 | Msa1059540:CDS | 60.0% |
| GGAGTTTGGCGAACCGGTTG+CGG | + | chr7_2:45872198-45872217 | Msa1059540:CDS | 60.0% | |
| ! | GCGGCTTGGGAGCTTATCTG+AGG | + | chr7_2:45872217-45872236 | Msa1059540:CDS | 60.0% |
| TGTCAAGCAGAAGGACGGGC+TGG | + | chr7_2:45874453-45874472 | Msa1059540:CDS | 60.0% | |
| !! | CAGAAGGACGGGCTGGAACA+AGG | + | chr7_2:45874460-45874479 | Msa1059540:CDS | 60.0% |
| GAAGTGCGGTGAGAACGTGC+AGG | - | chr7_2:45875391-45875410 | None:intergenic | 60.0% | |
| GAAGTGTGACCCCCTTTGCG+TGG | - | chr7_2:45876163-45876182 | None:intergenic | 60.0% | |
| GGAGTTTGGAGAGGAGGGGA+GGG | + | chr7_2:45876662-45876681 | Msa1059540:intron | 60.0% | |
| GAGTTTGGAGAGGAGGGGAG+GGG | + | chr7_2:45876663-45876682 | Msa1059540:intron | 60.0% | |
| ! | TTGGGAGGAGAGGGCTTTGG+AGG | + | chr7_2:45876742-45876761 | Msa1059540:intron | 60.0% |
| GAGTTTGGAGGGGAGCGGAA+GGG | - | chr7_2:45877009-45877028 | None:intergenic | 60.0% | |
| ACCCGGTCCACCCCATTGCA+TGG | - | chr7_2:45872020-45872039 | None:intergenic | 65.0% | |
| GTCAGCTAAGGACGGTGCGG+TGG | + | chr7_2:45872151-45872170 | Msa1059540:CDS | 65.0% | |
| AGGACGGTGCGGTGGTGAAC+CGG | + | chr7_2:45872159-45872178 | Msa1059540:CDS | 65.0% | |
| TTGGCGAACCGGTTGCGGCT+TGG | + | chr7_2:45872203-45872222 | Msa1059540:CDS | 65.0% | |
| TGGCGAACCGGTTGCGGCTT+GGG | + | chr7_2:45872204-45872223 | Msa1059540:CDS | 65.0% | |
| GGGAGTTTGGAGGGGAAGGG+AGG | + | chr7_2:45873360-45873379 | Msa1059540:intron | 65.0% | |
| GTGCGGTGAGAACGTGCAGG+TGG | - | chr7_2:45875388-45875407 | None:intergenic | 65.0% | |
| GGGAGTTTGGAGAGGAGGGG+AGG | + | chr7_2:45876661-45876680 | Msa1059540:intron | 65.0% | |
| TTTGGAGAGGAGGGGAGGGG+AGG | + | chr7_2:45876666-45876685 | Msa1059540:intron | 65.0% | |
| TTGGAGAGGAGGGGAGGGGA+GGG | + | chr7_2:45876667-45876686 | Msa1059540:intron | 65.0% | |
| !! | AAGGGAGGGCTTTGGGGGGT+TGG | - | chr7_2:45876991-45877010 | None:intergenic | 65.0% |
| ! | AGCGGAAGGGAGGGCTTTGG+GGG | - | chr7_2:45876996-45877015 | None:intergenic | 65.0% |
| GAGCGGAAGGGAGGGCTTTG+GGG | - | chr7_2:45876997-45877016 | None:intergenic | 65.0% | |
| GGAGCGGAAGGGAGGGCTTT+GGG | - | chr7_2:45876998-45877017 | None:intergenic | 65.0% | |
| TTGGAGGGGAGCGGAAGGGA+GGG | - | chr7_2:45877005-45877024 | None:intergenic | 65.0% | |
| TTTGGAGGGGAGCGGAAGGG+AGG | - | chr7_2:45877006-45877025 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGCGGA+AGG | - | chr7_2:45877010-45877029 | None:intergenic | 65.0% | |
| !! | CCAACCGGGGCTGGTTTAGC+CGG | + | chr7_2:45878214-45878233 | Msa1059540:intron | 65.0% |
| !! | GGAAGCACGTGAAGGCGCTG+AGG | + | chr7_2:45878694-45878713 | Msa1059540:CDS | 65.0% |
| GGACGGTGCGGTGGTGAACC+GGG | + | chr7_2:45872160-45872179 | Msa1059540:CDS | 70.0% | |
| TGGAGAGGAGGGGAGGGGAG+GGG | + | chr7_2:45876668-45876687 | Msa1059540:intron | 70.0% | |
| !! | GCGGAAGGGAGGGCTTTGGG+GGG | - | chr7_2:45876995-45877014 | None:intergenic | 70.0% |
| GGGAGCGGAAGGGAGGGCTT+TGG | - | chr7_2:45876999-45877018 | None:intergenic | 70.0% | |
| CCGGCTAAACCAGCCCCGGT+TGG | - | chr7_2:45878217-45878236 | None:intergenic | 70.0% | |
| AGAGGAGGGGAGGGGAGGGG+AGG | + | chr7_2:45876671-45876690 | Msa1059540:intron | 75.0% | |
| GAGGAGGGGAGGGGAGGGGA+GGG | + | chr7_2:45876672-45876691 | Msa1059540:intron | 75.0% | |
| AGGAGGGGAGGGGAGGGGAG+GGG | + | chr7_2:45876673-45876692 | Msa1059540:intron | 75.0% | |
| ! | AGGGGAGGGGAGGGGAGGGG+AGG | + | chr7_2:45876676-45876695 | Msa1059540:intron | 80.0% |
| ! | GGGGAGGGGAGGGGAGGGGA+GGG | + | chr7_2:45876677-45876696 | Msa1059540:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 45871824 | 45879153 | 45871824 | ID=Msa1059540;Name=Msa1059540 |
| chr7_2 | mRNA | 45871824 | 45879153 | 45871824 | ID=Msa1059540-mRNA-1;Parent=Msa1059540;Name=Msa1059540-mRNA-1;_AED=0.03;_eAED=0.03;_QI=181|1|1|1|1|1|7|285|369 |
| chr7_2 | exon | 45871824 | 45872334 | 45871824 | ID=Msa1059540-mRNA-1:exon:8303;Parent=Msa1059540-mRNA-1 |
| chr7_2 | exon | 45874217 | 45874350 | 45874217 | ID=Msa1059540-mRNA-1:exon:8304;Parent=Msa1059540-mRNA-1 |
| chr7_2 | exon | 45874425 | 45874538 | 45874425 | ID=Msa1059540-mRNA-1:exon:8305;Parent=Msa1059540-mRNA-1 |
| chr7_2 | exon | 45875915 | 45876010 | 45875915 | ID=Msa1059540-mRNA-1:exon:8306;Parent=Msa1059540-mRNA-1 |
| chr7_2 | exon | 45877364 | 45877451 | 45877364 | ID=Msa1059540-mRNA-1:exon:8307;Parent=Msa1059540-mRNA-1 |
| chr7_2 | exon | 45877598 | 45877666 | 45877598 | ID=Msa1059540-mRNA-1:exon:8308;Parent=Msa1059540-mRNA-1 |
| chr7_2 | exon | 45878590 | 45879153 | 45878590 | ID=Msa1059540-mRNA-1:exon:8309;Parent=Msa1059540-mRNA-1 |
| chr7_2 | five_prime_UTR | 45871824 | 45872004 | 45871824 | ID=Msa1059540-mRNA-1:five_prime_utr;Parent=Msa1059540-mRNA-1 |
| chr7_2 | CDS | 45872005 | 45872334 | 45872005 | ID=Msa1059540-mRNA-1:cds;Parent=Msa1059540-mRNA-1 |
| chr7_2 | CDS | 45874217 | 45874350 | 45874217 | ID=Msa1059540-mRNA-1:cds;Parent=Msa1059540-mRNA-1 |
| chr7_2 | CDS | 45874425 | 45874538 | 45874425 | ID=Msa1059540-mRNA-1:cds;Parent=Msa1059540-mRNA-1 |
| chr7_2 | CDS | 45875915 | 45876010 | 45875915 | ID=Msa1059540-mRNA-1:cds;Parent=Msa1059540-mRNA-1 |
| chr7_2 | CDS | 45877364 | 45877451 | 45877364 | ID=Msa1059540-mRNA-1:cds;Parent=Msa1059540-mRNA-1 |
| chr7_2 | CDS | 45877598 | 45877666 | 45877598 | ID=Msa1059540-mRNA-1:cds;Parent=Msa1059540-mRNA-1 |
| chr7_2 | CDS | 45878590 | 45878868 | 45878590 | ID=Msa1059540-mRNA-1:cds;Parent=Msa1059540-mRNA-1 |
| chr7_2 | three_prime_UTR | 45878869 | 45879153 | 45878869 | ID=Msa1059540-mRNA-1:three_prime_utr;Parent=Msa1059540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
