AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0318000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318000 MtrunA17_Chr2g0291731 91.579 950 32 3 1 903 1 949 0.0 1751
Msa0318000 MtrunA17_Chr4g0043451 52.800 250 96 5 37 269 76 320 6.18e-65 221
Msa0318000 MtrunA17_Chr1g0196911 31.679 524 327 10 354 853 620 1136 8.25e-57 213
Msa0318000 MtrunA17_Chr1g0196911 24.904 261 156 5 63 286 7 264 7.17e-15 79.7
Msa0318000 MtrunA17_Chr8g0390311 26.729 535 361 13 375 894 513 1031 2.99e-39 158
Msa0318000 MtrunA17_Chr7g0214471 33.962 318 172 10 24 317 162 465 7.34e-37 150
Msa0318000 MtrunA17_Chr7g0214471 30.366 382 254 5 527 899 695 1073 7.27e-36 147
Msa0318000 MtrunA17_Chr2g0295801 22.515 493 343 17 414 890 371 840 2.93e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318000 AT3G06880.4 22.863 503 345 17 409 890 474 954 1.09e-13 76.3
Msa0318000 AT3G06880.1 22.863 503 345 17 409 890 474 954 1.22e-13 75.9
Msa0318000 AT3G06880.3 22.863 503 345 17 409 890 474 954 1.37e-13 75.9
Msa0318000 AT3G06880.5 22.863 503 345 17 409 890 474 954 1.43e-13 75.9
Msa0318000 AT3G06880.2 22.863 503 345 17 409 890 474 954 1.44e-13 75.9

Find 128 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCTGTCACTTACAAATT+TGG 0.145905 2_4:+16287715 None:intergenic
ATCTTCTTCATCTTAAAATT+TGG 0.147104 2_4:-16287993 Msa0318000:CDS
ATTATTAATGCTTGATCTTA+TGG 0.169441 2_4:-16285956 Msa0318000:intron
CACTTACAAATTTGGATTAA+TGG 0.172353 2_4:+16287723 None:intergenic
TGAATTGATTATATCAATTT+TGG 0.173331 2_4:-16286743 Msa0318000:CDS
CTTATCTTCTTCCTGATCTT+TGG 0.195909 2_4:-16288035 Msa0318000:CDS
AGAATTCAAAGAAGAAATTT+TGG 0.203469 2_4:+16288185 None:intergenic
ATACTTAGAGTGTTGGAATT+TGG 0.207564 2_4:-16286544 Msa0318000:CDS
AGATAAGTTCTAGACAAATT+TGG 0.234041 2_4:+16288051 None:intergenic
CTACGAATAAAACAAATATT+AGG 0.244149 2_4:+16283613 None:intergenic
TTGCTTGAACTCATTGTTCT+TGG 0.257256 2_4:-16286262 Msa0318000:CDS
TCAATCTCTAATCCCTTTCT+TGG 0.261025 2_4:+16287447 None:intergenic
TTATCTTCTTCCTGATCTTT+GGG 0.276447 2_4:-16288034 Msa0318000:CDS
GCAACTAAGGGCCTTTCTTC+TGG 0.279150 2_4:+16285985 None:intergenic
GCAAAAGCACTACTCTTATT+AGG 0.281694 2_4:-16285572 Msa0318000:CDS
AATCTTCTAAGCAAAATTCT+TGG 0.282998 2_4:+16285486 None:intergenic
TCTTAAGAATTTCAAAATCT+TGG 0.293921 2_4:+16286077 None:intergenic
AGGGAATAATACTAATATTA+AGG 0.295294 2_4:+16283730 None:intergenic
GAAGAAGAAGAAGATCCTTT+TGG 0.304404 2_4:+16288573 None:intergenic
AGATATTCGACAAATAAAAT+TGG 0.307802 2_4:+16283914 None:intergenic
TTGAATTGCTTCACCTTGAT+AGG 0.315513 2_4:-16286198 Msa0318000:intron
ATGTAAAAGATGAAAATTTC+AGG 0.319235 2_4:-16288413 Msa0318000:CDS
ACCAACCACTGCTGTAATAA+TGG 0.339624 2_4:+16288461 None:intergenic
GTATAGTTGATTAGTTTGAT+AGG 0.339693 2_4:-16283663 Msa0318000:three_prime_UTR
TTTCTTTCAAATGAAGTTCA+TGG 0.345089 2_4:-16287952 Msa0318000:CDS
TAATAATATCACTGCAACTA+AGG 0.362173 2_4:+16285972 None:intergenic
CAAGTCTTACAACTATTTCA+TGG 0.367986 2_4:-16284683 Msa0318000:CDS
CTTCTTCATCTCAGTTCAAA+AGG 0.368201 2_4:-16288554 Msa0318000:CDS
TGTAGTCCAAGGTATCTTAG+AGG 0.373140 2_4:-16286797 Msa0318000:CDS
GACCTAAAACTTGGCCTTGA+TGG 0.374047 2_4:+16287787 None:intergenic
AACAGATACAAGGCAGTGTT+TGG 0.375753 2_4:-16287528 Msa0318000:intron
CAAAGCTTGGTTGAACTCTC+CGG 0.377724 2_4:-16286857 Msa0318000:CDS
AACAAATATTAGGTTTCTCT+TGG 0.378045 2_4:+16283623 None:intergenic
AAATATTAGGTTTCTCTTGG+TGG 0.380549 2_4:+16283626 None:intergenic
CATCAAAACCATTGAGAAGT+TGG 0.390903 2_4:+16286455 None:intergenic
AAACAATGGCTTAAAGTTAG+TGG 0.392361 2_4:-16287844 Msa0318000:CDS
CTTCTTGATGACCTAAAACT+TGG 0.393685 2_4:+16287778 None:intergenic
ACTAATCTTCGTGACCAAAC+TGG 0.401461 2_4:-16287480 Msa0318000:CDS
CAATTGTTCCCTTGCCATCA+AGG 0.425329 2_4:-16287801 Msa0318000:CDS
AGATTCAAAGTTACCACAAA+TGG 0.439280 2_4:-16284634 Msa0318000:CDS
ATTCTCCTGCATAAGAGAAA+TGG 0.439551 2_4:+16285546 None:intergenic
AACAAATGCTCCCAAAGATC+AGG 0.441719 2_4:+16288024 None:intergenic
TCTTCTGACACAAGAGACTT+AGG 0.442706 2_4:+16288504 None:intergenic
CTTTCTACATATATTTGTAA+TGG 0.443549 2_4:-16288597 Msa0318000:CDS
CATTTGCAGTCCACGTCACT+AGG 0.444043 2_4:+16283989 None:intergenic
TTGGTGTCAAAATTCCAGTT+TGG 0.444139 2_4:+16287466 None:intergenic
TTTCTTCATTTACCTTCAAA+AGG 0.444412 2_4:-16286013 Msa0318000:CDS
CTAAGGGCCTTTCTTCTGGT+GGG 0.447025 2_4:+16285989 None:intergenic
AACAAATGATATCATCAGAA+TGG 0.448456 2_4:-16286576 Msa0318000:CDS
CGGAGAGTTCAACCAAGCTT+TGG 0.449630 2_4:+16286858 None:intergenic
CTTGATGGCAAGGGAACAAT+TGG 0.456206 2_4:+16287802 None:intergenic
GCAGTGGTTGGTATACTTAG+TGG 0.460876 2_4:-16288450 Msa0318000:CDS
TATATTTGTAATGGTCCAAA+AGG 0.463999 2_4:-16288588 Msa0318000:CDS
TTGATTAGTTTGATAGGGTA+GGG 0.466729 2_4:-16283657 Msa0318000:three_prime_UTR
GCGAATAGCGAATTCGCATT+CGG 0.466819 2_4:+16286888 None:intergenic
AGACTTGCACGTGCTAAACT+TGG 0.474905 2_4:+16284699 None:intergenic
TCCGTGTATGTTTCGATGAA+CGG 0.478931 2_4:-16283890 Msa0318000:three_prime_UTR
ACAAATGATATCATCAGAAT+GGG 0.481504 2_4:-16286575 Msa0318000:CDS
TTCGCGTCGTTACCAAAGCT+TGG 0.483538 2_4:-16286870 Msa0318000:CDS
TAAGAAGTGCATACCTATCA+AGG 0.484606 2_4:+16286185 None:intergenic
ACTTTGAATCTTCAAGTAAG+TGG 0.485354 2_4:+16284646 None:intergenic
ACTAAGGGCCTTTCTTCTGG+TGG 0.486720 2_4:+16285988 None:intergenic
TTGAACTCATTGTTCTTGGA+AGG 0.486845 2_4:-16286258 Msa0318000:CDS
AAGATTGAGAAAGCCATTTG+TGG 0.489915 2_4:+16284621 None:intergenic
GGAGGCCATTTCTCTTATGC+AGG 0.490703 2_4:-16285551 Msa0318000:CDS
TTATGCAGGAGAATCATTGA+TGG 0.492867 2_4:-16285537 Msa0318000:CDS
TAAGGGCCTTTCTTCTGGTG+GGG 0.494279 2_4:+16285990 None:intergenic
AGGAAGAAGAAGGTGAGAGT+TGG 0.494821 2_4:-16284806 Msa0318000:CDS
GTGAGTCTTTGTTTAGAGAC+GGG 0.498056 2_4:+16284034 None:intergenic
TATAGTTGATTAGTTTGATA+GGG 0.498791 2_4:-16283662 Msa0318000:three_prime_UTR
ATAGCTTCTACAGCTTCCTT+CGG 0.500255 2_4:+16286312 None:intergenic
GCCATTGATACTTAGAGTGT+TGG 0.501193 2_4:-16286551 Msa0318000:CDS
TCCAACACTCTAAGTATCAA+TGG 0.503412 2_4:+16286550 None:intergenic
ATATATGTAGAAAGTGGTTG+TGG 0.505347 2_4:+16288606 None:intergenic
TCACACTTATTGAAATGAAA+GGG 0.507241 2_4:+16283711 None:intergenic
ATAAAACCTCTAAGATACCT+TGG 0.511591 2_4:+16286791 None:intergenic
AAAAGGCCCCACCAGAAGAA+AGG 0.515386 2_4:-16285996 Msa0318000:CDS
GGTATACTTAGTGGTTACAT+AGG 0.515410 2_4:-16288441 Msa0318000:CDS
ATCACACTTATTGAAATGAA+AGG 0.520218 2_4:+16283710 None:intergenic
AAAACTTGGCCTTGATGGCA+AGG 0.520335 2_4:+16287792 None:intergenic
ACAACAATTTCCTTGCAAGA+AGG 0.522900 2_4:+16285458 None:intergenic
GAAAAGAATTGATGATGAGA+AGG 0.523077 2_4:-16286371 Msa0318000:CDS
GCATGTGTCTTGTTCAAAAG+TGG 0.526161 2_4:-16284771 Msa0318000:CDS
AATAATATCACTGCAACTAA+GGG 0.526625 2_4:+16285973 None:intergenic
GCAAGACAAGTTCTTTCACT+TGG 0.527747 2_4:-16286412 Msa0318000:CDS
AGACAAGTTCTTTCACTTGG+TGG 0.529235 2_4:-16286409 Msa0318000:CDS
GTTGATTAGTTTGATAGGGT+AGG 0.530551 2_4:-16283658 Msa0318000:three_prime_UTR
TTGATTAAGGAGGAAGAAGA+AGG 0.532233 2_4:-16284816 Msa0318000:intron
TTCTTCATCTCAGTTCAAAA+GGG 0.535117 2_4:-16288553 Msa0318000:CDS
TGCTAAACTTGGAATGCCAT+TGG 0.536248 2_4:+16284710 None:intergenic
AGTGAGTCTTTGTTTAGAGA+CGG 0.539598 2_4:+16284033 None:intergenic
TTCTTAAGAGGACTCAAAGA+TGG 0.542035 2_4:-16286063 Msa0318000:CDS
TCCATTATTACAGCAGTGGT+TGG 0.546466 2_4:-16288462 Msa0318000:CDS
AGCTTCCATTATTACAGCAG+TGG 0.546722 2_4:-16288466 Msa0318000:CDS
ATGTAAAATGCTGCAACTTG+AGG 0.547343 2_4:+16286484 None:intergenic
AAAGCTTGGTTGAACTCTCC+GGG 0.547863 2_4:-16286856 Msa0318000:CDS
GCAGGAAGATAAATATCTCA+AGG 0.551167 2_4:-16285681 Msa0318000:intron
TATTACAACTATATGTTCAT+CGG 0.551263 2_4:-16286920 Msa0318000:CDS
TTACAAATATATGTAGAAAG+TGG 0.557362 2_4:+16288600 None:intergenic
AGATTCATTTCCTTCTTGCA+AGG 0.560069 2_4:-16285468 Msa0318000:CDS
GATAAACTGATAGAAGATCA+AGG 0.564437 2_4:-16288264 Msa0318000:CDS
GTCAATGCTTCTTCAATGAG+AGG 0.568971 2_4:+16286829 None:intergenic
ATATAGAGAAGAAGCTATTG+AGG 0.570152 2_4:-16285651 Msa0318000:CDS
CTCACAAATAGTTCTAGTTG+TGG 0.570468 2_4:+16286667 None:intergenic
TCATCTCAGTTCAAAAGGGT+AGG 0.576116 2_4:-16288549 Msa0318000:CDS
TAAGAGGACTCAAAGATGGA+TGG 0.576526 2_4:-16286059 Msa0318000:CDS
GGCAAGGGAACAATTGGAAG+AGG 0.578516 2_4:+16287808 None:intergenic
TGTGTCAGAAGATTCAAGAA+TGG 0.580254 2_4:-16288493 Msa0318000:CDS
TTGCTATGTATTATAAACAA+TGG 0.580498 2_4:-16287858 Msa0318000:CDS
TGATGAGATCTTTGTGAACA+TGG 0.581215 2_4:-16288307 Msa0318000:CDS
TCGTGTTGCATTCGAGCCGA+AGG 0.583812 2_4:-16286328 Msa0318000:CDS
CTTGCAAATTCTATAGCCAA+TGG 0.592942 2_4:-16284726 Msa0318000:CDS
GGAAGGAAACAAAATTCAAG+TGG 0.595509 2_4:-16286241 Msa0318000:CDS
TCTTTATCTATCAAAACCAA+TGG 0.600134 2_4:-16286602 Msa0318000:CDS
AAAAGAAGAAAAGATTTAGG+TGG 0.603013 2_4:-16288339 Msa0318000:CDS
ACACAATCTATTGTAGTCCA+AGG 0.607717 2_4:-16286808 Msa0318000:CDS
ATTTGCAGTCCACGTCACTA+GGG 0.610710 2_4:+16283990 None:intergenic
TTCAATGATTGTAGCAACTG+TGG 0.613085 2_4:+16284594 None:intergenic
AAACTTGGCCTTGATGGCAA+GGG 0.616412 2_4:+16287793 None:intergenic
AAAGCACTACTCTTATTAGG+AGG 0.623649 2_4:-16285569 Msa0318000:CDS
TGTTTATGACTCAATTCACA+AGG 0.624575 2_4:-16285438 Msa0318000:intron
TTGAATCTTCAAGTAAGTGG+AGG 0.627778 2_4:+16284649 None:intergenic
CAGGAAGATAAATATCTCAA+GGG 0.629457 2_4:-16285680 Msa0318000:CDS
GGACTCAAAGATGGATGGAG+TGG 0.630766 2_4:-16286054 Msa0318000:CDS
TCTTCAATGAGAGGATCACC+CGG 0.650331 2_4:+16286838 None:intergenic
GAAATCTCTCCCTAGTGACG+TGG 0.654828 2_4:-16283999 Msa0318000:CDS
ACCGTTCATCGAAACATACA+CGG 0.658066 2_4:+16283889 None:intergenic
AGTCTTTGTTTAGAGACGGG+AGG 0.662000 2_4:+16284037 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAATTTATATATGTTAA+GGG - chr2_4:16284956-16284975 Msa0318000:intron 10.0%
!!! TTTAATTATGTTAATCTTTT+TGG - chr2_4:16287889-16287908 Msa0318000:CDS 10.0%
!!! TATTATGTGCTTTAAAATTT+TGG - chr2_4:16284761-16284780 Msa0318000:CDS 15.0%
!! CTTCAAATTTATATATGTTA+AGG - chr2_4:16284955-16284974 Msa0318000:intron 15.0%
!!! TGAATTGATTATATCAATTT+TGG - chr2_4:16285579-16285598 Msa0318000:CDS 15.0%
!! AATTGCATATATGAAATTAT+TGG - chr2_4:16286406-16286425 Msa0318000:CDS 15.0%
!! TAAACATCATAACTATAAAT+AGG - chr2_4:16287357-16287376 Msa0318000:intron 15.0%
!!! TTTTTGTATATGATTGATTA+AGG - chr2_4:16287493-16287512 Msa0318000:CDS 15.0%
!!! ATTAATTTTAAGTGCTAATA+TGG + chr2_4:16287920-16287939 None:intergenic 15.0%
!! TTAAAAAAATTAGACAGATT+TGG + chr2_4:16288012-16288031 None:intergenic 15.0%
!! TTCTATACATTTAAATGATT+TGG - chr2_4:16288103-16288122 Msa0318000:CDS 15.0%
!! GAAAAAAAGTTAAACTATAT+AGG + chr2_4:16288212-16288231 None:intergenic 15.0%
!! TTACAAATATATGTAGAAAG+TGG + chr2_4:16283725-16283744 None:intergenic 20.0%
!! CTTTCTACATATATTTGTAA+TGG - chr2_4:16283725-16283744 Msa0318000:three_prime_UTR 20.0%
!! ATGTAAAAGATGAAAATTTC+AGG - chr2_4:16283909-16283928 Msa0318000:three_prime_UTR 20.0%
!! AGAAAAAGAAGAAAAGATTT+AGG - chr2_4:16283980-16283999 Msa0318000:CDS 20.0%
!!! AGAATTCAAAGAAGAAATTT+TGG + chr2_4:16284140-16284159 None:intergenic 20.0%
!! ATCTTCTTCATCTTAAAATT+TGG - chr2_4:16284329-16284348 Msa0318000:intron 20.0%
!! CAAAGTTTACAATGAAAAAA+TGG - chr2_4:16284423-16284442 Msa0318000:intron 20.0%
!! TTGCTATGTATTATAAACAA+TGG - chr2_4:16284464-16284483 Msa0318000:intron 20.0%
!! GTTTGTATATCATAAAAAGA+TGG + chr2_4:16284632-16284651 None:intergenic 20.0%
!! AAGCAAAAGAATATATTTAC+CGG - chr2_4:16284686-16284705 Msa0318000:CDS 20.0%
!! GAGATTGATAAAAAAATGTA+TGG - chr2_4:16284890-16284909 Msa0318000:intron 20.0%
!! ATAGAAATATCCTATACATA+AGG - chr2_4:16285139-16285158 Msa0318000:intron 20.0%
!! TATTACAACTATATGTTCAT+CGG - chr2_4:16285402-16285421 Msa0318000:intron 20.0%
!! TCTTAAGAATTTCAAAATCT+TGG + chr2_4:16286248-16286267 None:intergenic 20.0%
!!! AAGATTTTGAAATTCTTAAG+AGG - chr2_4:16286247-16286266 Msa0318000:CDS 20.0%
!! ATTATTAATGCTTGATCTTA+TGG - chr2_4:16286366-16286385 Msa0318000:CDS 20.0%
!!! CCAATTTTGTTTGATAATTA+TGG + chr2_4:16286986-16287005 None:intergenic 20.0%
!! CCATAATTATCAAACAAAAT+TGG - chr2_4:16286983-16287002 Msa0318000:CDS 20.0%
!!! TTACCATTTTACAAATATCT+CGG - chr2_4:16287039-16287058 Msa0318000:intron 20.0%
!! TTGTATCTTACAAAAAATTC+AGG - chr2_4:16287797-16287816 Msa0318000:CDS 20.0%
!! AGATATTCGACAAATAAAAT+TGG + chr2_4:16288411-16288430 None:intergenic 20.0%
!! AGGGAATAATACTAATATTA+AGG + chr2_4:16288595-16288614 None:intergenic 20.0%
!!! TATAGTTGATTAGTTTGATA+GGG - chr2_4:16288660-16288679 Msa0318000:five_prime_UTR 20.0%
!! CTACGAATAAAACAAATATT+AGG + chr2_4:16288712-16288731 None:intergenic 20.0%
! ACACAATCATAAAAAACACA+TGG - chr2_4:16283670-16283689 Msa0318000:three_prime_UTR 25.0%
! TATATTTGTAATGGTCCAAA+AGG - chr2_4:16283734-16283753 Msa0318000:three_prime_UTR 25.0%
!!! AGAGAAATGCAATTCTTTTT+TGG - chr2_4:16283943-16283962 Msa0318000:CDS 25.0%
! AAAAGAAGAAAAGATTTAGG+TGG - chr2_4:16283983-16284002 Msa0318000:CDS 25.0%
!!! AGATAAGTTCTAGACAAATT+TGG + chr2_4:16284274-16284293 None:intergenic 25.0%
!!! ATTTTAAGATGAAGAAGATG+AGG + chr2_4:16284328-16284347 None:intergenic 25.0%
! TTTCTTTCAAATGAAGTTCA+TGG - chr2_4:16284370-16284389 Msa0318000:intron 25.0%
! TACAATGAAAAAATGGATAG+TGG - chr2_4:16284430-16284449 Msa0318000:intron 25.0%
! CACTTACAAATTTGGATTAA+TGG + chr2_4:16284602-16284621 None:intergenic 25.0%
!!! TTTTTTTTGCAACAGATACA+AGG - chr2_4:16284784-16284803 Msa0318000:CDS 25.0%
! ACAGATAAGTAAATCCAAAT+AGG + chr2_4:16284982-16285001 None:intergenic 25.0%
! GTATATAAGTCCTTATGTAT+AGG + chr2_4:16285152-16285171 None:intergenic 25.0%
!!! GAGCTTTATTCTTATCAATT+TGG + chr2_4:16285255-16285274 None:intergenic 25.0%
!!! AATATAGTTGACTTTTGACA+TGG + chr2_4:16285332-16285351 None:intergenic 25.0%
!! TTTTGGCAGAATTAATAACA+AGG - chr2_4:16285596-16285615 Msa0318000:CDS 25.0%
! TCTTTATCTATCAAAACCAA+TGG - chr2_4:16285720-16285739 Msa0318000:intron 25.0%
! AACAAATGATATCATCAGAA+TGG - chr2_4:16285746-16285765 Msa0318000:intron 25.0%
! ACAAATGATATCATCAGAAT+GGG - chr2_4:16285747-16285766 Msa0318000:intron 25.0%
! TTTCTTCATTTACCTTCAAA+AGG - chr2_4:16286309-16286328 Msa0318000:CDS 25.0%
! AATAATATCACTGCAACTAA+GGG + chr2_4:16286352-16286371 None:intergenic 25.0%
! TAATAATATCACTGCAACTA+AGG + chr2_4:16286353-16286372 None:intergenic 25.0%
!! TTTAGAACTCCTACATTTAT+AGG - chr2_4:16286481-16286500 Msa0318000:CDS 25.0%
! TAACATTTGCCTATAAATGT+AGG + chr2_4:16286493-16286512 None:intergenic 25.0%
! AATCTTCTAAGCAAAATTCT+TGG + chr2_4:16286839-16286858 None:intergenic 25.0%
!! TTTATTTCTTTAAGTCTACG+AGG + chr2_4:16287124-16287143 None:intergenic 25.0%
! TATTTCAATTATGTAAGTCG+AGG - chr2_4:16287176-16287195 Msa0318000:intron 25.0%
! ATTTCAATTATGTAAGTCGA+GGG - chr2_4:16287177-16287196 Msa0318000:intron 25.0%
!!! TAATTTTCGAGTGCTATAAA+GGG + chr2_4:16287464-16287483 None:intergenic 25.0%
!!! ATAATTTTCGAGTGCTATAA+AGG + chr2_4:16287465-16287484 None:intergenic 25.0%
! TTGTATATGATTGATTAAGG+AGG - chr2_4:16287496-16287515 Msa0318000:CDS 25.0%
!!! TTTTTTTCCTTGTAAGAAAG+TGG - chr2_4:16287974-16287993 Msa0318000:CDS 25.0%
! CTAGTACAAAAGTTAAAGTT+TGG + chr2_4:16288062-16288081 None:intergenic 25.0%
!! ACTTTTGTACTAGAAATTTG+TGG - chr2_4:16288069-16288088 Msa0318000:CDS 25.0%
! TCACACTTATTGAAATGAAA+GGG + chr2_4:16288614-16288633 None:intergenic 25.0%
! ATCACACTTATTGAAATGAA+AGG + chr2_4:16288615-16288634 None:intergenic 25.0%
!!! GTATAGTTGATTAGTTTGAT+AGG - chr2_4:16288659-16288678 Msa0318000:five_prime_UTR 25.0%
! AACAAATATTAGGTTTCTCT+TGG + chr2_4:16288702-16288721 None:intergenic 25.0%
ATATATGTAGAAAGTGGTTG+TGG + chr2_4:16283719-16283738 None:intergenic 30.0%
TTCTTCATCTCAGTTCAAAA+GGG - chr2_4:16283769-16283788 Msa0318000:three_prime_UTR 30.0%
GATAAACTGATAGAAGATCA+AGG - chr2_4:16284058-16284077 Msa0318000:intron 30.0%
TTATCTTCTTCCTGATCTTT+GGG - chr2_4:16284288-16284307 Msa0318000:intron 30.0%
AAACAATGGCTTAAAGTTAG+TGG - chr2_4:16284478-16284497 Msa0318000:intron 30.0%
! AAAAGTACATGTATCTTGTC+CGG + chr2_4:16284708-16284727 None:intergenic 30.0%
TTATAGATGCAGTTCAATTC+AGG - chr2_4:16284919-16284938 Msa0318000:intron 30.0%
ATATATGTTAAGGGCCTATT+TGG - chr2_4:16284965-16284984 Msa0318000:intron 30.0%
ACAACTTATAGACATGTCAT+AGG + chr2_4:16285027-16285046 None:intergenic 30.0%
! AAAGGAGACAGAAAATCTTT+TGG - chr2_4:16285217-16285236 Msa0318000:intron 30.0%
ACTGAAAATAGTCCAATCTT+TGG + chr2_4:16285279-16285298 None:intergenic 30.0%
!! ATAAAACCTCTAAGATACCT+TGG + chr2_4:16285534-16285553 None:intergenic 30.0%
!!! AAGCACTAGTCTTTTTCTTA+AGG - chr2_4:16285687-16285706 Msa0318000:intron 30.0%
!!! GATATCATTTGTTTTGCCAT+TGG + chr2_4:16285739-16285758 None:intergenic 30.0%
!! ATACTTAGAGTGTTGGAATT+TGG - chr2_4:16285778-16285797 Msa0318000:intron 30.0%
! AGTTGCAGCATTTTACATTT+TGG - chr2_4:16285843-16285862 Msa0318000:intron 30.0%
!! GAAAAGAATTGATGATGAGA+AGG - chr2_4:16285951-16285970 Msa0318000:intron 30.0%
!!! GTTTTGAAAAACACAACAGA+AGG - chr2_4:16286221-16286240 Msa0318000:CDS 30.0%
GGCAAATGTTAATAAGTTAG+TGG - chr2_4:16286502-16286521 Msa0318000:CDS 30.0%
! TAGTGGTTATGTTAGTTTCT+AGG - chr2_4:16286519-16286538 Msa0318000:CDS 30.0%
! AGTGGTTATGTTAGTTTCTA+GGG - chr2_4:16286520-16286539 Msa0318000:CDS 30.0%
!! TTATGTTAGTTTCTAGGGTT+CGG - chr2_4:16286525-16286544 Msa0318000:CDS 30.0%
TAAAGAGTTTCAAACATGAC+CGG + chr2_4:16286562-16286581 None:intergenic 30.0%
CAGGAAGATAAATATCTCAA+GGG - chr2_4:16286642-16286661 Msa0318000:CDS 30.0%
ATATAGAGAAGAAGCTATTG+AGG - chr2_4:16286671-16286690 Msa0318000:CDS 30.0%
!! AATTTGCTTTTGCAAAAAGC+TGG - chr2_4:16286810-16286829 Msa0318000:CDS 30.0%
TGTTTATGACTCAATTCACA+AGG - chr2_4:16286884-16286903 Msa0318000:CDS 30.0%
TCAATTCACAAGGTATGATT+TGG - chr2_4:16286894-16286913 Msa0318000:CDS 30.0%
! ACCTTGTTATCTCAAAAACA+GGG + chr2_4:16287077-16287096 None:intergenic 30.0%
CAAGTCTTACAACTATTTCA+TGG - chr2_4:16287639-16287658 Msa0318000:intron 30.0%
ACTTTGAATCTTCAAGTAAG+TGG + chr2_4:16287679-16287698 None:intergenic 30.0%
AGATTCAAAGTTACCACAAA+TGG - chr2_4:16287688-16287707 Msa0318000:intron 30.0%
AATCAAGAACTAATGTGACT+TGG - chr2_4:16287947-16287966 Msa0318000:CDS 30.0%
ACAAAAGTTAAAGTTTGGCA+TGG + chr2_4:16288057-16288076 None:intergenic 30.0%
! TAAATGATTTGGCATCATAG+AGG - chr2_4:16288114-16288133 Msa0318000:CDS 30.0%
AGAGGCTTTCAATAAAGATA+TGG - chr2_4:16288132-16288151 Msa0318000:CDS 30.0%
TAATATGTCATATTGCTAGC+AGG - chr2_4:16288250-16288269 Msa0318000:CDS 30.0%
!! TTGATTAGTTTGATAGGGTA+GGG - chr2_4:16288665-16288684 Msa0318000:five_prime_UTR 30.0%
AAATATTAGGTTTCTCTTGG+TGG + chr2_4:16288699-16288718 None:intergenic 30.0%
!!! GATTTTGAAGCATGAAGAAG+AGG + chr2_4:16283639-16283658 None:intergenic 35.0%
! GAAGAAGAAGAAGATCCTTT+TGG + chr2_4:16283752-16283771 None:intergenic 35.0%
CTTCTTCATCTCAGTTCAAA+AGG - chr2_4:16283768-16283787 Msa0318000:three_prime_UTR 35.0%
TGTGTCAGAAGATTCAAGAA+TGG - chr2_4:16283829-16283848 Msa0318000:three_prime_UTR 35.0%
GGTATACTTAGTGGTTACAT+AGG - chr2_4:16283881-16283900 Msa0318000:three_prime_UTR 35.0%
TGATGAGATCTTTGTGAACA+TGG - chr2_4:16284015-16284034 Msa0318000:CDS 35.0%
CTTATCTTCTTCCTGATCTT+TGG - chr2_4:16284287-16284306 Msa0318000:intron 35.0%
! CTTCTTGATGACCTAAAACT+TGG + chr2_4:16284547-16284566 None:intergenic 35.0%
! GTTGCTGTCACTTACAAATT+TGG + chr2_4:16284610-16284629 None:intergenic 35.0%
TGCTTATATTTCGTTCCAGA+GGG + chr2_4:16284671-16284690 None:intergenic 35.0%
TTGCTTATATTTCGTTCCAG+AGG + chr2_4:16284672-16284691 None:intergenic 35.0%
!! ATTTTTGCTGCTCTTGTTTG+AGG + chr2_4:16284820-16284839 None:intergenic 35.0%
!! TTGGTGTCAAAATTCCAGTT+TGG + chr2_4:16284859-16284878 None:intergenic 35.0%
!! TGGAATTTTGACACCAAGAA+AGG - chr2_4:16284862-16284881 Msa0318000:intron 35.0%
!! GGAATTTTGACACCAAGAAA+GGG - chr2_4:16284863-16284882 Msa0318000:intron 35.0%
TCAATCTCTAATCCCTTTCT+TGG + chr2_4:16284878-16284897 None:intergenic 35.0%
! TATCTGTTTGTCAGAGCTTT+TGG - chr2_4:16284995-16285014 Msa0318000:intron 35.0%
GAATAAAGCTCACCAAAGAT+TGG - chr2_4:16285264-16285283 Msa0318000:intron 35.0%
! ACTTTTGACATGGTTTCTGT+TGG + chr2_4:16285322-16285341 None:intergenic 35.0%
ACACAATCTATTGTAGTCCA+AGG - chr2_4:16285514-16285533 Msa0318000:CDS 35.0%
!! CTCACAAATAGTTCTAGTTG+TGG + chr2_4:16285658-16285677 None:intergenic 35.0%
TCCAACACTCTAAGTATCAA+TGG + chr2_4:16285775-16285794 None:intergenic 35.0%
ATGTAAAATGCTGCAACTTG+AGG + chr2_4:16285841-16285860 None:intergenic 35.0%
! ATTTTGGACCAACTTCTCAA+TGG - chr2_4:16285859-16285878 Msa0318000:intron 35.0%
CATCAAAACCATTGAGAAGT+TGG + chr2_4:16285870-16285889 None:intergenic 35.0%
TTGCTTGAACTCATTGTTCT+TGG - chr2_4:16286060-16286079 Msa0318000:CDS 35.0%
TTGAACTCATTGTTCTTGGA+AGG - chr2_4:16286064-16286083 Msa0318000:CDS 35.0%
GGAAGGAAACAAAATTCAAG+TGG - chr2_4:16286081-16286100 Msa0318000:CDS 35.0%
TTGAATTGCTTCACCTTGAT+AGG - chr2_4:16286124-16286143 Msa0318000:intron 35.0%
! TAAGAAGTGCATACCTATCA+AGG + chr2_4:16286140-16286159 None:intergenic 35.0%
TTCTTAAGAGGACTCAAAGA+TGG - chr2_4:16286259-16286278 Msa0318000:CDS 35.0%
GCAGGAAGATAAATATCTCA+AGG - chr2_4:16286641-16286660 Msa0318000:CDS 35.0%
!! GCAAAAGCACTACTCTTATT+AGG - chr2_4:16286750-16286769 Msa0318000:CDS 35.0%
! AAAGCACTACTCTTATTAGG+AGG - chr2_4:16286753-16286772 Msa0318000:CDS 35.0%
ATTCTCCTGCATAAGAGAAA+TGG + chr2_4:16286779-16286798 None:intergenic 35.0%
TTATGCAGGAGAATCATTGA+TGG - chr2_4:16286785-16286804 Msa0318000:CDS 35.0%
AGATTCATTTCCTTCTTGCA+AGG - chr2_4:16286854-16286873 Msa0318000:CDS 35.0%
ACAACAATTTCCTTGCAAGA+AGG + chr2_4:16286867-16286886 None:intergenic 35.0%
CGTCCGAGATATTTGTAAAA+TGG + chr2_4:16287045-16287064 None:intergenic 35.0%
!!! ACCCTGTTTTTGAGATAACA+AGG - chr2_4:16287073-16287092 Msa0318000:intron 35.0%
! GACCTTGTTATCTCAAAAAC+AGG + chr2_4:16287078-16287097 None:intergenic 35.0%
TTGATTAAGGAGGAAGAAGA+AGG - chr2_4:16287506-16287525 Msa0318000:CDS 35.0%
CTTGCAAATTCTATAGCCAA+TGG - chr2_4:16287596-16287615 Msa0318000:intron 35.0%
TTGAATCTTCAAGTAAGTGG+AGG + chr2_4:16287676-16287695 None:intergenic 35.0%
AAGATTGAGAAAGCCATTTG+TGG + chr2_4:16287704-16287723 None:intergenic 35.0%
TTCAATGATTGTAGCAACTG+TGG + chr2_4:16287731-16287750 None:intergenic 35.0%
!! CAAATTGCCACTTTCTTACA+AGG + chr2_4:16287984-16288003 None:intergenic 35.0%
TGTAAGAAAGTGGCAATTTG+AGG - chr2_4:16287984-16288003 Msa0318000:CDS 35.0%
! AGTGAGTCTTTGTTTAGAGA+CGG + chr2_4:16288292-16288311 None:intergenic 35.0%
!! GTTGATTAGTTTGATAGGGT+AGG - chr2_4:16288664-16288683 Msa0318000:five_prime_UTR 35.0%
TCATCTCAGTTCAAAAGGGT+AGG - chr2_4:16283773-16283792 Msa0318000:three_prime_UTR 40.0%
TCTTCTGACACAAGAGACTT+AGG + chr2_4:16283821-16283840 None:intergenic 40.0%
AGCTTCCATTATTACAGCAG+TGG - chr2_4:16283856-16283875 Msa0318000:three_prime_UTR 40.0%
TCCATTATTACAGCAGTGGT+TGG - chr2_4:16283860-16283879 Msa0318000:three_prime_UTR 40.0%
ACCAACCACTGCTGTAATAA+TGG + chr2_4:16283864-16283883 None:intergenic 40.0%
AACAAATGCTCCCAAAGATC+AGG + chr2_4:16284301-16284320 None:intergenic 40.0%
TGTGTATATAGTACTCCCTC+TGG - chr2_4:16284653-16284672 Msa0318000:CDS 40.0%
AACAGATACAAGGCAGTGTT+TGG - chr2_4:16284794-16284813 Msa0318000:CDS 40.0%
ACTAATCTTCGTGACCAAAC+TGG - chr2_4:16284842-16284861 Msa0318000:intron 40.0%
CTTTCTGTCACAAGTGAGAA+AGG + chr2_4:16285201-16285220 None:intergenic 40.0%
CTTTCTCACTTGTGACAGAA+AGG - chr2_4:16285199-16285218 Msa0318000:intron 40.0%
! ATTTTCAGTGCTTGTCTTGC+AGG - chr2_4:16285290-16285309 Msa0318000:intron 40.0%
GTCAATGCTTCTTCAATGAG+AGG + chr2_4:16285496-16285515 None:intergenic 40.0%
! TGTAGTCCAAGGTATCTTAG+AGG - chr2_4:16285525-16285544 Msa0318000:CDS 40.0%
GCCATTGATACTTAGAGTGT+TGG - chr2_4:16285771-16285790 Msa0318000:intron 40.0%
GCAAGACAAGTTCTTTCACT+TGG - chr2_4:16285910-16285929 Msa0318000:intron 40.0%
AGACAAGTTCTTTCACTTGG+TGG - chr2_4:16285913-16285932 Msa0318000:intron 40.0%
ATAGCTTCTACAGCTTCCTT+CGG + chr2_4:16286013-16286032 None:intergenic 40.0%
TAAGAGGACTCAAAGATGGA+TGG - chr2_4:16286263-16286282 Msa0318000:CDS 40.0%
GAGTTCTCAAGTTAAGTCTC+GGG + chr2_4:16287247-16287266 None:intergenic 40.0%
GGAGTTCTCAAGTTAAGTCT+CGG + chr2_4:16287248-16287267 None:intergenic 40.0%
AAGGTGAGAGTTGGCAAAAA+AGG - chr2_4:16287525-16287544 Msa0318000:CDS 40.0%
AGGTGAGAGTTGGCAAAAAA+GGG - chr2_4:16287526-16287545 Msa0318000:CDS 40.0%
! GCATGTGTCTTGTTCAAAAG+TGG - chr2_4:16287551-16287570 Msa0318000:intron 40.0%
TGCTAAACTTGGAATGCCAT+TGG + chr2_4:16287615-16287634 None:intergenic 40.0%
! GTGAGTCTTTGTTTAGAGAC+GGG + chr2_4:16288291-16288310 None:intergenic 40.0%
TCCGTGTATGTTTCGATGAA+CGG - chr2_4:16288432-16288451 Msa0318000:CDS 40.0%
ACCGTTCATCGAAACATACA+CGG + chr2_4:16288436-16288455 None:intergenic 40.0%
! GCAGTGGTTGGTATACTTAG+TGG - chr2_4:16283872-16283891 Msa0318000:three_prime_UTR 45.0%
! CTTGATGGCAAGGGAACAAT+TGG + chr2_4:16284523-16284542 None:intergenic 45.0%
CAATTGTTCCCTTGCCATCA+AGG - chr2_4:16284521-16284540 Msa0318000:intron 45.0%
!! AAACTTGGCCTTGATGGCAA+GGG + chr2_4:16284532-16284551 None:intergenic 45.0%
!! AAAACTTGGCCTTGATGGCA+AGG + chr2_4:16284533-16284552 None:intergenic 45.0%
! TGCCATCAAGGCCAAGTTTT+AGG - chr2_4:16284533-16284552 Msa0318000:CDS 45.0%
!! GACCTAAAACTTGGCCTTGA+TGG + chr2_4:16284538-16284557 None:intergenic 45.0%
GCGAATAGCGAATTCGCATT+CGG + chr2_4:16285437-16285456 None:intergenic 45.0%
CAAAGCTTGGTTGAACTCTC+CGG - chr2_4:16285465-16285484 Msa0318000:CDS 45.0%
AAAGCTTGGTTGAACTCTCC+GGG - chr2_4:16285466-16285485 Msa0318000:CDS 45.0%
TCTTCAATGAGAGGATCACC+CGG + chr2_4:16285487-16285506 None:intergenic 45.0%
CAAACATGACCGGAGGTTTA+GGG + chr2_4:16286552-16286571 None:intergenic 45.0%
TCAAACATGACCGGAGGTTT+AGG + chr2_4:16286553-16286572 None:intergenic 45.0%
AGAGTTTCAAACATGACCGG+AGG + chr2_4:16286559-16286578 None:intergenic 45.0%
TGCAATAGCAGATGTGTTGC+AGG - chr2_4:16286623-16286642 Msa0318000:CDS 45.0%
GAAAATCCTACCAAGTAGCG+AGG + chr2_4:16287269-16287288 None:intergenic 45.0%
AGGAAGAAGAAGGTGAGAGT+TGG - chr2_4:16287516-16287535 Msa0318000:CDS 45.0%
AGACTTGCACGTGCTAAACT+TGG + chr2_4:16287626-16287645 None:intergenic 45.0%
! AGTCTTTGTTTAGAGACGGG+AGG + chr2_4:16288288-16288307 None:intergenic 45.0%
ATTTGCAGTCCACGTCACTA+GGG + chr2_4:16288335-16288354 None:intergenic 45.0%
GGCAAGGGAACAATTGGAAG+AGG + chr2_4:16284517-16284536 None:intergenic 50.0%
TTCGCGTCGTTACCAAAGCT+TGG - chr2_4:16285452-16285471 Msa0318000:CDS 50.0%
CGGAGAGTTCAACCAAGCTT+TGG + chr2_4:16285467-16285486 None:intergenic 50.0%
GGACTCAAAGATGGATGGAG+TGG - chr2_4:16286268-16286287 Msa0318000:CDS 50.0%
AAAAGGCCCCACCAGAAGAA+AGG - chr2_4:16286326-16286345 Msa0318000:CDS 50.0%
TAAGGGCCTTTCTTCTGGTG+GGG + chr2_4:16286335-16286354 None:intergenic 50.0%
CTAAGGGCCTTTCTTCTGGT+GGG + chr2_4:16286336-16286355 None:intergenic 50.0%
ACTAAGGGCCTTTCTTCTGG+TGG + chr2_4:16286337-16286356 None:intergenic 50.0%
GCAACTAAGGGCCTTTCTTC+TGG + chr2_4:16286340-16286359 None:intergenic 50.0%
GGAGGCCATTTCTCTTATGC+AGG - chr2_4:16286771-16286790 Msa0318000:CDS 50.0%
CTTGAGAACTCCTCGCTACT+TGG - chr2_4:16287256-16287275 Msa0318000:intron 50.0%
AGAACTCCTCGCTACTTGGT+AGG - chr2_4:16287260-16287279 Msa0318000:intron 50.0%
GAAATCTCTCCCTAGTGACG+TGG - chr2_4:16288323-16288342 Msa0318000:CDS 50.0%
CATTTGCAGTCCACGTCACT+AGG + chr2_4:16288336-16288355 None:intergenic 50.0%
TCGTGTTGCATTCGAGCCGA+AGG - chr2_4:16285994-16286013 Msa0318000:CDS 55.0%
! CTTCTGGTGGGGCCTTTTGA+AGG + chr2_4:16286324-16286343 None:intergenic 55.0%
GGGTTCGGACCCTAAACCTC+CGG - chr2_4:16286540-16286559 Msa0318000:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 16283579 16288765 16283579 ID=Msa0318000;Name=Msa0318000
chr2_4 mRNA 16283579 16288765 16283579 ID=Msa0318000-mRNA-1;Parent=Msa0318000;Name=Msa0318000-mRNA-1;_AED=0.03;_eAED=0.03;_QI=110|0.83|0.85|1|0.83|0.71|7|363|903
chr2_4 exon 16283579 16284072 16283579 ID=Msa0318000-mRNA-1:exon:6079;Parent=Msa0318000-mRNA-1
chr2_4 exon 16284526 16284829 16284526 ID=Msa0318000-mRNA-1:exon:6078;Parent=Msa0318000-mRNA-1
chr2_4 exon 16285439 16285699 16285439 ID=Msa0318000-mRNA-1:exon:6077;Parent=Msa0318000-mRNA-1
chr2_4 exon 16285957 16286104 16285957 ID=Msa0318000-mRNA-1:exon:6076;Parent=Msa0318000-mRNA-1
chr2_4 exon 16286199 16287032 16286199 ID=Msa0318000-mRNA-1:exon:6075;Parent=Msa0318000-mRNA-1
chr2_4 exon 16287438 16287545 16287438 ID=Msa0318000-mRNA-1:exon:6074;Parent=Msa0318000-mRNA-1
chr2_4 exon 16287730 16288765 16287730 ID=Msa0318000-mRNA-1:exon:6073;Parent=Msa0318000-mRNA-1
chr2_4 five_prime_UTR 16288656 16288765 16288656 ID=Msa0318000-mRNA-1:five_prime_utr;Parent=Msa0318000-mRNA-1
chr2_4 CDS 16287730 16288655 16287730 ID=Msa0318000-mRNA-1:cds;Parent=Msa0318000-mRNA-1
chr2_4 CDS 16287438 16287545 16287438 ID=Msa0318000-mRNA-1:cds;Parent=Msa0318000-mRNA-1
chr2_4 CDS 16286199 16287032 16286199 ID=Msa0318000-mRNA-1:cds;Parent=Msa0318000-mRNA-1
chr2_4 CDS 16285957 16286104 16285957 ID=Msa0318000-mRNA-1:cds;Parent=Msa0318000-mRNA-1
chr2_4 CDS 16285439 16285699 16285439 ID=Msa0318000-mRNA-1:cds;Parent=Msa0318000-mRNA-1
chr2_4 CDS 16284526 16284829 16284526 ID=Msa0318000-mRNA-1:cds;Parent=Msa0318000-mRNA-1
chr2_4 CDS 16283942 16284072 16283942 ID=Msa0318000-mRNA-1:cds;Parent=Msa0318000-mRNA-1
chr2_4 three_prime_UTR 16283579 16283941 16283579 ID=Msa0318000-mRNA-1:three_prime_utr;Parent=Msa0318000-mRNA-1
Gene Sequence

>Msa0318000

ATGGCTTCTTCACAACAGCATAAACTTCCACAACCACTTTCTACATATATTTGTAATGGTCCAAAAGGATCTTCTTCTTCTTCTTCATCTCAGTTCAAAAGGGTAGGTTCTACTTCAGAAAGATCAAATCCTAAGTCTCTTGTGTCAGAAGATTCAAGAATGGATGAAGCTTCCATTATTACAGCAGTGGTTGGTATACTTAGTGGTTACATAGGAAGATATGTAAAAGATGAAAATTTCAGGAGAATCATAAGAGAGAAATGCAATTCTTTTTTGGATAGAATAAGAACAAGAAAAAGAAGAAAAGATTTAGGTGGTGATGATGATGATGAGATCTTTGTGAACATGGAATTTTGTATGAAGAAAATTGATAAACTGATAGAAGATCAAGGAACAAAGAAACAAGTTACAATGATGAAAAGTTTAAGAAATTCTATTGAGCTTTTAACCAAAATTTCTTCTTTGAATTCTTCTAAATCTTATCTCTCATCTTTTGCTCATCTTTACTTAGCAATAGCTTACAAGCTACACAAAAATGATAGAGTTTCTTCAAAGCATTTACTTCAAGTGTTTTGTTATTCTCCAAATTTGTCTAGAACTTATCTTCTTCCTGATCTTTGGGAGCATTTGTTTCTTCCTCATCTTCTTCATCTTAAAATTTGGTATAATAGTGAGTTTGAGTTTCTTTCAAATGAAGTTCATGGTGAGAAAGAAAAGAAAATCAAAGTTTTGAACAAAGTTTACAATGAAAAAATGGATAGTGGAACTTATCTTTTTGCTATGTATTATAAACAATGGCTTAAAGTTAGTGGTGCTAGTGAGCTTCCTCTTCCAATTGTTCCCTTGCCATCAAGGCCAAGTTTTAGGTCATCAAGAAGAATGTCTTCAGATTCTTCTATTTCAAATTCTTCCATTAATCCAAATTTATACAAGGCAGTGTTTGGCCTCAAACAAGAGCAGCAAAAATCTACTAATCTTCGTGACCAAACTGGAATTTTGACACCAAGAAAGGGATTAGAGATTGATAAAAAAATGTTCATACCAACAGAAACCATGTCAAAAGTCAACTATATTAAATCTAAGAATGCTTCTTCAAGTGTTCTTTCAAGTGACTTAGTTGAAGCTATTACAACTATATGTTCATCGGATATTCTAACCGAATGCGAATTCGCTATTCGCGTCGTTACCAAAGCTTGGTTGAACTCTCCGGGTGATCCTCTCATTGAAGAAGCATTGACACAATCTATTGTAGTCCAAGGTATCTTAGAGGTTTTATTCGTCTCGACTGAAGACGAAATTCTTGAATTGATTATATCAATTTTGGCAGAATTAATAACAAGGAATGATTCAATTAGACAAATAATACTAAATTCTGATCCACAACTAGAACTATTTGTGAGACTTTTAAGAAGCACTAGTCTTTTTCTTAAGGCTTCAGTGCTTCTTTATCTATCAAAACCAATGGCAAAACAAATGATATCATCAGAATGGGTGCCATTGATACTTAGAGTGTTGGAATTTGGAGACAAATTGCAGACACTTTTCACAGTACAATGTAGTCCTCAAGTTGCAGCATTTTACATTTTGGACCAACTTCTCAATGGTTTTGATGAAGATAAGAATTTAGAGAATGCAAGACAAGTTCTTTCACTTGGTGGATTGACACTTCTCATGAAAAGAATTGATGATGAGAAGGAGAATTCTGCTTTGATTATTTCGTGTTGCATTCGAGCCGAAGGAAGCTGTAGAAGCTATTTAGCTGAGAATATTAACAAGAGTTCATTGCTTGAACTCATTGTTCTTGGAAGGAAACAAAATTCAAGTGGTTATGCATTGTCTTTGCTATTTGAATTGCTTCACCTTGATAGAAGGACCAAGATTTTGAAATTCTTAAGAGGACTCAAAGATGGATGGAGTGGCTTAAACACACTGCACATTTTCTTCATTTACCTTCAAAAGGCCCCACCAGAAGAAAGGCCCTTAGTTGCAGTGATATTATTAATGCTTGATCTTATGGAAGATAAATATCTCAAGGGTAGCATATATAGAGAAGAAGCTATTGAGGCAATTGTAGCTGCTTTAAATTGTCAAATGTGTGATGATAGAGTTCAACAGCAATCAGCAAAAGCACTACTCTTATTAGGAGGCCATTTCTCTTATGCAGGAGAATCATTGATGGAAAATTTGCTTTTGCAAAAAGCTGGTTTCCAAGAATTTTGCTTAGAAGATTCATTTCCTTCTTGCAAGGAAATTGTTGTTTATGACTCAATTCACAAGGAGGAAGAAGAAGGTGAGAGTTGGCAAAAAAGGGCAGCATGTGTCTTGTTCAAAAGTGGAAATAAGAGATTGCTATCTGCACTTGCAAATTCTATAGCCAATGGCATTCCAAGTTTAGCACGTGCAAGTCTTACAACTATTTCATGGATGTGTAGCTACCTCCACTTACTTGAAGATTCAAAGTTACCACAAATGGCTTTCTCAATCTTAACGCCACAGTTGCTACAATCATTGAATTATGATAATGATGTTGAAGAAAGAGTTCTAGCTTCATATTCTTTGTTGTATCTTACAAAAAATTCAGGATGTGACTCTATCCTCCCGTCTCTAAACAAAGACTCACTCACACATCTCAGAAATCTCTCCCTAGTGACGTGGACTGCAAATGAGCTTATCTCAATATTCTCAAAAAGAAGCATGCAATCAAAACAATAA

Protein sequence

>Msa0318000

MASSQQHKLPQPLSTYICNGPKGSSSSSSSQFKRVGSTSERSNPKSLVSEDSRMDEASIITAVVGILSGYIGRYVKDENFRRIIREKCNSFLDRIRTRKRRKDLGGDDDDEIFVNMEFCMKKIDKLIEDQGTKKQVTMMKSLRNSIELLTKISSLNSSKSYLSSFAHLYLAIAYKLHKNDRVSSKHLLQVFCYSPNLSRTYLLPDLWEHLFLPHLLHLKIWYNSEFEFLSNEVHGEKEKKIKVLNKVYNEKMDSGTYLFAMYYKQWLKVSGASELPLPIVPLPSRPSFRSSRRMSSDSSISNSSINPNLYKAVFGLKQEQQKSTNLRDQTGILTPRKGLEIDKKMFIPTETMSKVNYIKSKNASSSVLSSDLVEAITTICSSDILTECEFAIRVVTKAWLNSPGDPLIEEALTQSIVVQGILEVLFVSTEDEILELIISILAELITRNDSIRQIILNSDPQLELFVRLLRSTSLFLKASVLLYLSKPMAKQMISSEWVPLILRVLEFGDKLQTLFTVQCSPQVAAFYILDQLLNGFDEDKNLENARQVLSLGGLTLLMKRIDDEKENSALIISCCIRAEGSCRSYLAENINKSSLLELIVLGRKQNSSGYALSLLFELLHLDRRTKILKFLRGLKDGWSGLNTLHIFFIYLQKAPPEERPLVAVILLMLDLMEDKYLKGSIYREEAIEAIVAALNCQMCDDRVQQQSAKALLLLGGHFSYAGESLMENLLLQKAGFQEFCLEDSFPSCKEIVVYDSIHKEEEEGESWQKRAACVLFKSGNKRLLSALANSIANGIPSLARASLTTISWMCSYLHLLEDSKLPQMAFSILTPQLLQSLNYDNDVEERVLASYSLLYLTKNSGCDSILPSLNKDSLTHLRNLSLVTWTANELISIFSKRSMQSKQ*