Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062600 | XP_003597698.1 | 82.909 | 275 | 28 | 2 | 1 | 256 | 1 | 275 | 4.52e-159 | 455 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062600 | sp|Q500U8|TKPR1_ARATH | 64.706 | 272 | 76 | 3 | 4 | 256 | 7 | 277 | 1.01e-122 | 356 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062600 | G7IUM5 | 82.909 | 275 | 28 | 2 | 1 | 256 | 1 | 275 | 2.16e-159 | 455 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0719700 | Msa1062600 | 0.903105 | 4.891882e-79 | -8.615850e-47 |
| Msa0129440 | Msa1062600 | 0.802749 | 4.839994e-49 | -8.615850e-47 |
| Msa1023450 | Msa1062600 | 0.914478 | 1.829044e-84 | -8.615850e-47 |
| Msa1062600 | Msa1102700 | 0.882616 | 8.968719e-71 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062600 | MtrunA17_Chr2g0331211 | 82.909 | 275 | 28 | 2 | 1 | 256 | 1 | 275 | 4.16e-163 | 455 |
| Msa1062600 | MtrunA17_Chr3g0077231 | 44.118 | 272 | 129 | 4 | 5 | 256 | 6 | 274 | 1.39e-73 | 228 |
| Msa1062600 | MtrunA17_Chr3g0077221 | 44.118 | 272 | 129 | 4 | 5 | 256 | 10 | 278 | 2.19e-70 | 219 |
| Msa1062600 | MtrunA17_Chr8g0363831 | 43.233 | 266 | 127 | 3 | 5 | 250 | 9 | 270 | 1.52e-67 | 212 |
| Msa1062600 | MtrunA17_Chr8g0364051 | 43.123 | 269 | 129 | 4 | 5 | 253 | 8 | 272 | 1.98e-67 | 212 |
| Msa1062600 | MtrunA17_Chr4g0039311 | 40.959 | 271 | 137 | 5 | 5 | 255 | 11 | 278 | 1.80e-64 | 204 |
| Msa1062600 | MtrunA17_Chr4g0039321 | 40.809 | 272 | 136 | 5 | 5 | 255 | 9 | 276 | 5.95e-62 | 198 |
| Msa1062600 | MtrunA17_Chr1g0155411 | 36.900 | 271 | 150 | 3 | 5 | 255 | 8 | 277 | 7.48e-61 | 196 |
| Msa1062600 | MtrunA17_Chr5g0431311 | 40.221 | 271 | 141 | 4 | 5 | 256 | 5 | 273 | 1.30e-60 | 194 |
| Msa1062600 | MtrunA17_Chr4g0002661 | 38.989 | 277 | 147 | 5 | 4 | 261 | 12 | 285 | 3.46e-58 | 188 |
| Msa1062600 | MtrunA17_Chr1g0155431 | 35.793 | 271 | 153 | 2 | 5 | 255 | 8 | 277 | 7.04e-58 | 188 |
| Msa1062600 | MtrunA17_Chr3g0106111 | 37.818 | 275 | 150 | 4 | 1 | 256 | 1 | 273 | 7.94e-58 | 187 |
| Msa1062600 | MtrunA17_Chr5g0423551 | 38.889 | 270 | 144 | 4 | 4 | 254 | 3 | 270 | 4.12e-57 | 185 |
| Msa1062600 | MtrunA17_Chr4g0048961 | 36.655 | 281 | 147 | 6 | 4 | 255 | 13 | 291 | 1.65e-55 | 182 |
| Msa1062600 | MtrunA17_Chr7g0245671 | 37.410 | 278 | 150 | 6 | 4 | 258 | 7 | 283 | 2.36e-54 | 179 |
| Msa1062600 | MtrunA17_Chr4g0002961 | 37.857 | 280 | 146 | 5 | 4 | 261 | 12 | 285 | 2.36e-53 | 176 |
| Msa1062600 | MtrunA17_Chr7g0245741 | 35.531 | 273 | 153 | 5 | 4 | 255 | 7 | 277 | 3.71e-52 | 173 |
| Msa1062600 | MtrunA17_Chr7g0245691 | 35.842 | 279 | 154 | 6 | 4 | 258 | 7 | 284 | 4.44e-52 | 172 |
| Msa1062600 | MtrunA17_Chr7g0245641 | 35.971 | 278 | 154 | 5 | 4 | 258 | 44 | 320 | 1.12e-51 | 172 |
| Msa1062600 | MtrunA17_Chr4g0042101 | 34.752 | 282 | 145 | 6 | 4 | 249 | 23 | 301 | 9.41e-49 | 165 |
| Msa1062600 | MtrunA17_Chr2g0333781 | 38.745 | 271 | 137 | 5 | 5 | 255 | 20 | 281 | 3.79e-48 | 163 |
| Msa1062600 | MtrunA17_Chr7g0245631 | 37.037 | 270 | 147 | 5 | 4 | 252 | 7 | 274 | 3.88e-48 | 162 |
| Msa1062600 | MtrunA17_Chr2g0291541 | 35.531 | 273 | 149 | 7 | 5 | 254 | 10 | 278 | 1.24e-47 | 161 |
| Msa1062600 | MtrunA17_Chr4g0001321 | 36.803 | 269 | 145 | 5 | 5 | 255 | 17 | 278 | 2.91e-46 | 158 |
| Msa1062600 | MtrunA17_Chr7g0245731 | 33.574 | 277 | 153 | 7 | 4 | 255 | 57 | 327 | 3.95e-45 | 156 |
| Msa1062600 | MtrunA17_Chr4g0010991 | 31.111 | 270 | 163 | 4 | 5 | 252 | 8 | 276 | 1.34e-37 | 135 |
| Msa1062600 | MtrunA17_Chr7g0245711 | 29.752 | 242 | 140 | 6 | 38 | 255 | 4 | 239 | 9.87e-32 | 119 |
| Msa1062600 | MtrunA17_Chr2g0282001 | 27.431 | 288 | 171 | 5 | 2 | 252 | 4 | 290 | 1.95e-28 | 111 |
| Msa1062600 | MtrunA17_Chr7g0275521 | 29.412 | 289 | 163 | 9 | 3 | 252 | 5 | 291 | 2.20e-28 | 110 |
| Msa1062600 | MtrunA17_Chr6g0450211 | 28.000 | 300 | 179 | 9 | 5 | 274 | 55 | 347 | 2.97e-27 | 108 |
| Msa1062600 | MtrunA17_Chr2g0281991 | 27.178 | 287 | 171 | 5 | 3 | 252 | 6 | 291 | 4.76e-27 | 107 |
| Msa1062600 | MtrunA17_Chr2g0282011 | 27.526 | 287 | 170 | 5 | 3 | 252 | 6 | 291 | 3.88e-24 | 99.8 |
| Msa1062600 | MtrunA17_Chr5g0411071 | 26.592 | 267 | 155 | 7 | 5 | 248 | 12 | 260 | 3.98e-21 | 90.5 |
| Msa1062600 | MtrunA17_Chr3g0080551 | 39.640 | 111 | 46 | 3 | 102 | 191 | 18 | 128 | 1.54e-13 | 66.2 |
| Msa1062600 | MtrunA17_Chr3g0133771 | 26.437 | 261 | 163 | 8 | 4 | 247 | 3 | 251 | 8.37e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062600 | AT4G35420.1 | 64.706 | 272 | 76 | 3 | 4 | 256 | 7 | 277 | 1.03e-123 | 356 |
| Msa1062600 | AT1G51410.1 | 44.727 | 275 | 129 | 5 | 2 | 256 | 6 | 277 | 3.28e-69 | 217 |
| Msa1062600 | AT5G19440.1 | 44.118 | 272 | 129 | 4 | 5 | 256 | 10 | 278 | 4.79e-68 | 214 |
| Msa1062600 | AT5G58490.1 | 42.804 | 271 | 134 | 4 | 5 | 256 | 9 | 277 | 6.66e-66 | 208 |
| Msa1062600 | AT1G09480.2 | 41.199 | 267 | 132 | 5 | 5 | 250 | 8 | 270 | 2.56e-65 | 207 |
| Msa1062600 | AT1G09480.1 | 40.892 | 269 | 134 | 5 | 5 | 252 | 55 | 319 | 6.15e-65 | 207 |
| Msa1062600 | AT1G66800.1 | 40.530 | 264 | 138 | 3 | 5 | 252 | 8 | 268 | 6.82e-63 | 201 |
| Msa1062600 | AT1G09510.1 | 38.596 | 285 | 151 | 4 | 5 | 268 | 8 | 289 | 2.19e-62 | 199 |
| Msa1062600 | AT1G09490.1 | 39.405 | 269 | 138 | 4 | 5 | 252 | 8 | 272 | 1.55e-60 | 194 |
| Msa1062600 | AT1G09500.3 | 38.346 | 266 | 142 | 2 | 5 | 250 | 8 | 271 | 1.79e-60 | 193 |
| Msa1062600 | AT1G09500.1 | 38.060 | 268 | 144 | 2 | 5 | 252 | 8 | 273 | 5.93e-60 | 193 |
| Msa1062600 | AT5G42800.1 | 39.483 | 271 | 143 | 3 | 5 | 255 | 8 | 277 | 9.48e-60 | 194 |
| Msa1062600 | AT1G68540.1 | 37.687 | 268 | 146 | 3 | 7 | 254 | 6 | 272 | 2.60e-57 | 186 |
| Msa1062600 | AT2G02400.1 | 37.970 | 266 | 144 | 4 | 5 | 252 | 6 | 268 | 6.03e-56 | 182 |
| Msa1062600 | AT1G61720.1 | 36.691 | 278 | 145 | 5 | 4 | 252 | 12 | 287 | 2.12e-53 | 177 |
| Msa1062600 | AT1G25460.1 | 39.179 | 268 | 140 | 6 | 7 | 254 | 6 | 270 | 9.41e-53 | 174 |
| Msa1062600 | AT4G27250.1 | 33.096 | 281 | 145 | 6 | 6 | 249 | 14 | 288 | 1.25e-48 | 165 |
| Msa1062600 | AT2G33590.1 | 36.301 | 292 | 162 | 5 | 4 | 274 | 8 | 296 | 8.24e-48 | 162 |
| Msa1062600 | AT4G27250.2 | 33.212 | 274 | 144 | 6 | 6 | 249 | 14 | 278 | 1.34e-47 | 162 |
| Msa1062600 | AT1G76470.1 | 36.786 | 280 | 154 | 4 | 4 | 262 | 6 | 283 | 1.30e-46 | 159 |
| Msa1062600 | AT2G33600.1 | 34.686 | 271 | 158 | 3 | 4 | 256 | 8 | 277 | 1.42e-46 | 159 |
| Msa1062600 | AT2G45400.2 | 35.231 | 281 | 148 | 6 | 5 | 255 | 40 | 316 | 1.58e-46 | 159 |
| Msa1062600 | AT2G45400.1 | 35.231 | 281 | 148 | 6 | 5 | 255 | 40 | 316 | 3.85e-46 | 159 |
| Msa1062600 | AT1G09500.2 | 35.043 | 234 | 130 | 2 | 39 | 252 | 8 | 239 | 1.04e-44 | 153 |
| Msa1062600 | AT1G09490.2 | 35.897 | 234 | 127 | 4 | 39 | 252 | 11 | 241 | 1.26e-44 | 152 |
| Msa1062600 | AT1G15950.5 | 36.957 | 276 | 147 | 7 | 5 | 261 | 13 | 280 | 4.00e-43 | 149 |
| Msa1062600 | AT1G15950.6 | 37.407 | 270 | 142 | 7 | 5 | 255 | 13 | 274 | 7.13e-43 | 147 |
| Msa1062600 | AT1G15950.4 | 37.407 | 270 | 142 | 7 | 5 | 255 | 13 | 274 | 1.51e-42 | 147 |
| Msa1062600 | AT1G15950.3 | 37.407 | 270 | 142 | 7 | 5 | 255 | 13 | 274 | 2.80e-42 | 148 |
| Msa1062600 | AT1G15950.1 | 37.407 | 270 | 142 | 7 | 5 | 255 | 13 | 274 | 2.80e-42 | 148 |
| Msa1062600 | AT1G15950.2 | 37.407 | 270 | 142 | 7 | 5 | 255 | 13 | 274 | 3.25e-42 | 147 |
| Msa1062600 | AT1G80820.2 | 35.926 | 270 | 146 | 7 | 5 | 255 | 8 | 269 | 8.51e-41 | 142 |
| Msa1062600 | AT1G80820.1 | 35.926 | 270 | 146 | 7 | 5 | 255 | 8 | 269 | 4.67e-40 | 142 |
| Msa1062600 | AT2G45400.3 | 31.579 | 247 | 137 | 5 | 37 | 255 | 17 | 259 | 1.41e-33 | 124 |
| Msa1062600 | AT2G45400.4 | 35.616 | 219 | 107 | 6 | 5 | 193 | 40 | 254 | 2.04e-31 | 117 |
| Msa1062600 | AT2G23910.2 | 26.296 | 270 | 171 | 7 | 6 | 255 | 11 | 272 | 1.28e-28 | 110 |
| Msa1062600 | AT2G23910.3 | 26.296 | 270 | 171 | 7 | 6 | 255 | 11 | 272 | 1.34e-28 | 110 |
| Msa1062600 | AT2G23910.1 | 25.926 | 270 | 172 | 7 | 6 | 255 | 11 | 272 | 1.95e-28 | 110 |
| Msa1062600 | AT5G14700.1 | 29.588 | 267 | 148 | 10 | 5 | 239 | 55 | 313 | 2.77e-24 | 100 |
| Msa1062600 | AT1G68540.2 | 33.735 | 166 | 89 | 3 | 109 | 254 | 1 | 165 | 2.97e-24 | 97.4 |
| Msa1062600 | AT4G30470.1 | 26.199 | 271 | 169 | 8 | 6 | 255 | 11 | 271 | 2.25e-23 | 97.1 |
| Msa1062600 | AT2G23910.4 | 23.750 | 240 | 155 | 7 | 36 | 255 | 7 | 238 | 2.40e-19 | 85.5 |
| Msa1062600 | AT5G14700.2 | 29.680 | 219 | 118 | 8 | 5 | 194 | 55 | 266 | 1.35e-16 | 78.2 |
| Msa1062600 | AT1G15950.7 | 30.899 | 178 | 102 | 4 | 97 | 255 | 1 | 176 | 9.33e-16 | 75.1 |
| Msa1062600 | AT4G33360.2 | 26.667 | 270 | 168 | 11 | 4 | 255 | 14 | 271 | 1.85e-12 | 66.6 |
| Msa1062600 | AT4G33360.3 | 26.667 | 270 | 168 | 11 | 4 | 255 | 2 | 259 | 2.45e-12 | 66.6 |
| Msa1062600 | AT4G33360.1 | 26.667 | 270 | 168 | 11 | 4 | 255 | 14 | 271 | 3.41e-12 | 66.2 |
Find 59 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCATAAAGTTGAACATTTA+TGG | 0.085081 | 7_2:+53580911 | Msa1062600:CDS |
| ATTAGAACAGTTAGAGATTT+AGG | 0.154769 | 7_2:+53580791 | Msa1062600:CDS |
| TAGCTTCGACAATGCGATTA+TGG | 0.197247 | 7_2:+53580993 | Msa1062600:CDS |
| ATTCTACCATCATTCATAAT+TGG | 0.235090 | 7_2:+53581760 | Msa1062600:CDS |
| ACTAGTCCAAGCTGATTTAA+TGG | 0.254779 | 7_2:+53580963 | Msa1062600:CDS |
| CGCAAGGACACTCTACCTTT+TGG | 0.261628 | 7_2:-53582115 | None:intergenic |
| AGTTGAACATTTATGGAAGT+TGG | 0.340616 | 7_2:+53580918 | Msa1062600:CDS |
| AATAATTGATAATGATGATT+TGG | 0.352042 | 7_2:+53582054 | Msa1062600:CDS |
| AGGATCATTTGATATATGAT+TGG | 0.357612 | 7_2:-53581052 | None:intergenic |
| CATAAATATGTTGGCAAGCT+AGG | 0.359702 | 7_2:-53581784 | None:intergenic |
| CAAAATACAGGCAGAAATCT+TGG | 0.360481 | 7_2:+53581231 | Msa1062600:intron |
| GAATGCAAAGTATGTGTAAC+AGG | 0.368238 | 7_2:+53580707 | Msa1062600:CDS |
| AGCTTCGACAATGCGATTAT+GGG | 0.388369 | 7_2:+53580994 | Msa1062600:CDS |
| GGATCATTTGATATATGATT+GGG | 0.413478 | 7_2:-53581051 | None:intergenic |
| GTATGTGTAACAGGAGCTTC+AGG | 0.422762 | 7_2:+53580716 | Msa1062600:CDS |
| TCTGCCAGTGTCTTTGAGAC+CGG | 0.441085 | 7_2:-53581688 | None:intergenic |
| TTTCTTCCATTAAATCAGCT+TGG | 0.450929 | 7_2:-53580969 | None:intergenic |
| AGAAATTTCAATGGCATGGA+AGG | 0.457193 | 7_2:+53581939 | Msa1062600:CDS |
| TAGAGTGTCCTTGCGTTTCA+CGG | 0.461971 | 7_2:+53582123 | Msa1062600:CDS |
| AACACAACTCGAACAAGGGC+TGG | 0.477786 | 7_2:-53581304 | None:intergenic |
| TTTGATATATGATTGGGTAC+TGG | 0.478192 | 7_2:-53581045 | None:intergenic |
| TTGAATTAGGGCATGGTACC+CGG | 0.479414 | 7_2:+53581669 | Msa1062600:intron |
| ATGCTAGCAAATCGTTATCC+TGG | 0.493557 | 7_2:+53582082 | Msa1062600:CDS |
| ATTTCAATGGCATGGAAGGA+TGG | 0.500563 | 7_2:+53581943 | Msa1062600:CDS |
| AGGCTTTGTTCTCATAAAGA+AGG | 0.503784 | 7_2:-53582003 | None:intergenic |
| CTGCCAGTGTCTTTGAGACC+GGG | 0.512637 | 7_2:-53581687 | None:intergenic |
| ACAGAGAAATTTCAATGGCA+TGG | 0.513392 | 7_2:+53581935 | Msa1062600:CDS |
| TTTAGCGTACCTTGGACCGC+TGG | 0.513714 | 7_2:-53581256 | None:intergenic |
| TTTCAATGGCATGGAAGGAT+GGG | 0.514191 | 7_2:+53581944 | Msa1062600:CDS |
| TCATATATCAAATGATCCTA+AGG | 0.522536 | 7_2:+53581056 | Msa1062600:CDS |
| CCTGGTTTCCCATTCCCAAA+AGG | 0.524676 | 7_2:+53582100 | Msa1062600:CDS |
| AGATAATGAAATGTAATTCG+AGG | 0.525984 | 7_2:+53581578 | Msa1062600:intron |
| GCAACACATTTAGCGTACCT+TGG | 0.529211 | 7_2:-53581264 | None:intergenic |
| TGGGAATATTGCAATGAGAA+AGG | 0.533022 | 7_2:+53581721 | Msa1062600:CDS |
| CTAGGTCCAATTATGAATGA+TGG | 0.539988 | 7_2:-53581766 | None:intergenic |
| GCAGTGGAACATAAATATGT+TGG | 0.548336 | 7_2:-53581793 | None:intergenic |
| TGAACATTTATGGAAGTTGG+AGG | 0.548932 | 7_2:+53580921 | Msa1062600:CDS |
| CAATTATTGCTGAACTGCAA+AGG | 0.555112 | 7_2:-53582039 | None:intergenic |
| CAATGAGAAAGGAATAGACT+TGG | 0.556122 | 7_2:+53581732 | Msa1062600:CDS |
| CGGCTAACACAACTCGAACA+AGG | 0.563967 | 7_2:-53581309 | None:intergenic |
| TATGAGAACAAAGCCTCTCA+TGG | 0.568344 | 7_2:+53582010 | Msa1062600:CDS |
| ATCTTGGAACCAGCGGTCCA+AGG | 0.581499 | 7_2:+53581247 | Msa1062600:CDS |
| ACTAGTTCGAGTCTTTCTGT+TGG | 0.581772 | 7_2:-53580946 | None:intergenic |
| GGCTAACACAACTCGAACAA+GGG | 0.585276 | 7_2:-53581308 | None:intergenic |
| GCCTAGCACATCAGATGCAG+TGG | 0.588657 | 7_2:-53581809 | None:intergenic |
| GGGAAACAGAGAAATTTCAA+TGG | 0.589773 | 7_2:+53581930 | Msa1062600:CDS |
| TCCACTGCATCTGATGTGCT+AGG | 0.594949 | 7_2:+53581808 | Msa1062600:CDS |
| AGGATAACGATTTGCTAGCA+TGG | 0.597463 | 7_2:-53582080 | None:intergenic |
| GAACATTTATGGAAGTTGGA+GGG | 0.598986 | 7_2:+53580922 | Msa1062600:CDS |
| AATGCGATTATGGGATGCAA+AGG | 0.600616 | 7_2:+53581003 | Msa1062600:CDS |
| GATGTGCTAGGCTTGTTCAA+AGG | 0.618046 | 7_2:+53581820 | Msa1062600:CDS |
| GTGAACCACCGTGAAACGCA+AGG | 0.619513 | 7_2:-53582131 | None:intergenic |
| AGAACAAAGCCTCTCATGGT+AGG | 0.634432 | 7_2:+53582014 | Msa1062600:CDS |
| GCAAAGGTACCTACCATGAG+AGG | 0.646700 | 7_2:-53582023 | None:intergenic |
| TATATGATTGGGTACTGGAG+AGG | 0.647630 | 7_2:-53581040 | None:intergenic |
| GGCAGAAATCTTGGAACCAG+CGG | 0.649586 | 7_2:+53581240 | Msa1062600:intron |
| GTACCCGGTCTCAAAGACAC+TGG | 0.671559 | 7_2:+53581684 | Msa1062600:CDS |
| AGTGTCCTTGCGTTTCACGG+TGG | 0.687838 | 7_2:+53582126 | Msa1062600:CDS |
| ACTAACAGCTGAAGATGACG+CGG | 0.706152 | 7_2:-53581329 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCATTTATATTTTTCAT+AGG | + | chr7_2:53581085-53581104 | Msa1062600:intron | 10.0% |
| !!! | ATTTCATTTATATTTTTCAT+AGG | + | chr7_2:53581085-53581104 | Msa1062600:intron | 10.0% |
| !! | TACAAATATATAATTACTTG+AGG | - | chr7_2:53581443-53581462 | None:intergenic | 15.0% |
| !! | GTAATAGTAATACTATAAAA+GGG | - | chr7_2:53581526-53581545 | None:intergenic | 15.0% |
| !! | AGTAATAGTAATACTATAAA+AGG | - | chr7_2:53581527-53581546 | None:intergenic | 15.0% |
| !!! | AATAATTGATAATGATGATT+TGG | + | chr7_2:53582054-53582073 | Msa1062600:CDS | 15.0% |
| !! | TACAAATATATAATTACTTG+AGG | - | chr7_2:53581443-53581462 | None:intergenic | 15.0% |
| !! | GTAATAGTAATACTATAAAA+GGG | - | chr7_2:53581526-53581545 | None:intergenic | 15.0% |
| !! | AGTAATAGTAATACTATAAA+AGG | - | chr7_2:53581527-53581546 | None:intergenic | 15.0% |
| !!! | AATAATTGATAATGATGATT+TGG | + | chr7_2:53582054-53582073 | Msa1062600:CDS | 15.0% |
| !!! | AGGTAAAATGTATTTTATGA+TGG | + | chr7_2:53580811-53580830 | Msa1062600:intron | 20.0% |
| !! | ACAAACATGTTATTGAATTA+GGG | + | chr7_2:53581657-53581676 | Msa1062600:intron | 20.0% |
| !!! | TGTTAGTTTAATTAGCAATA+TGG | - | chr7_2:53581909-53581928 | None:intergenic | 20.0% |
| !! | ATATTGCTAATTAAACTAAC+AGG | + | chr7_2:53581908-53581927 | Msa1062600:intron | 20.0% |
| !! | TATTGCTAATTAAACTAACA+GGG | + | chr7_2:53581909-53581928 | Msa1062600:intron | 20.0% |
| !!! | AGGTAAAATGTATTTTATGA+TGG | + | chr7_2:53580811-53580830 | Msa1062600:intron | 20.0% |
| !! | ACAAACATGTTATTGAATTA+GGG | + | chr7_2:53581657-53581676 | Msa1062600:intron | 20.0% |
| !!! | TGTTAGTTTAATTAGCAATA+TGG | - | chr7_2:53581909-53581928 | None:intergenic | 20.0% |
| !! | ATATTGCTAATTAAACTAAC+AGG | + | chr7_2:53581908-53581927 | Msa1062600:intron | 20.0% |
| !! | TATTGCTAATTAAACTAACA+GGG | + | chr7_2:53581909-53581928 | Msa1062600:intron | 20.0% |
| ! | ATTAGAACAGTTAGAGATTT+AGG | + | chr7_2:53580791-53580810 | Msa1062600:CDS | 25.0% |
| ! | GTGAAAAGTGAAAATACATT+TGG | - | chr7_2:53580837-53580856 | None:intergenic | 25.0% |
| ! | CCTGCAAGTATATATAAAAA+TGG | - | chr7_2:53580886-53580905 | None:intergenic | 25.0% |
| !!! | CCATTTTTATATATACTTGC+AGG | + | chr7_2:53580883-53580902 | Msa1062600:intron | 25.0% |
| ! | AGCATAAAGTTGAACATTTA+TGG | + | chr7_2:53580911-53580930 | Msa1062600:CDS | 25.0% |
| ! | GGATCATTTGATATATGATT+GGG | - | chr7_2:53581054-53581073 | None:intergenic | 25.0% |
| ! | AGGATCATTTGATATATGAT+TGG | - | chr7_2:53581055-53581074 | None:intergenic | 25.0% |
| ! | TCATATATCAAATGATCCTA+AGG | + | chr7_2:53581056-53581075 | Msa1062600:CDS | 25.0% |
| ! | TAAATGAAATATCACACCTT+AGG | - | chr7_2:53581075-53581094 | None:intergenic | 25.0% |
| !! | TCAATTTTTGTCCAAAATAC+AGG | + | chr7_2:53581219-53581238 | Msa1062600:intron | 25.0% |
| ! | AGATAATGAAATGTAATTCG+AGG | + | chr7_2:53581578-53581597 | Msa1062600:intron | 25.0% |
| ! | GACAAACATGTTATTGAATT+AGG | + | chr7_2:53581656-53581675 | Msa1062600:intron | 25.0% |
| ! | ATTCTACCATCATTCATAAT+TGG | + | chr7_2:53581760-53581779 | Msa1062600:CDS | 25.0% |
| ! | ATTGCTAATTAAACTAACAG+GGG | + | chr7_2:53581910-53581929 | Msa1062600:intron | 25.0% |
| ! | ATTAGAACAGTTAGAGATTT+AGG | + | chr7_2:53580791-53580810 | Msa1062600:CDS | 25.0% |
| ! | GTGAAAAGTGAAAATACATT+TGG | - | chr7_2:53580837-53580856 | None:intergenic | 25.0% |
| ! | CCTGCAAGTATATATAAAAA+TGG | - | chr7_2:53580886-53580905 | None:intergenic | 25.0% |
| !!! | CCATTTTTATATATACTTGC+AGG | + | chr7_2:53580883-53580902 | Msa1062600:intron | 25.0% |
| ! | AGCATAAAGTTGAACATTTA+TGG | + | chr7_2:53580911-53580930 | Msa1062600:CDS | 25.0% |
| ! | GGATCATTTGATATATGATT+GGG | - | chr7_2:53581054-53581073 | None:intergenic | 25.0% |
| ! | AGGATCATTTGATATATGAT+TGG | - | chr7_2:53581055-53581074 | None:intergenic | 25.0% |
| ! | TCATATATCAAATGATCCTA+AGG | + | chr7_2:53581056-53581075 | Msa1062600:CDS | 25.0% |
| ! | TAAATGAAATATCACACCTT+AGG | - | chr7_2:53581075-53581094 | None:intergenic | 25.0% |
| !! | TCAATTTTTGTCCAAAATAC+AGG | + | chr7_2:53581219-53581238 | Msa1062600:intron | 25.0% |
| ! | AGATAATGAAATGTAATTCG+AGG | + | chr7_2:53581578-53581597 | Msa1062600:intron | 25.0% |
| ! | GACAAACATGTTATTGAATT+AGG | + | chr7_2:53581656-53581675 | Msa1062600:intron | 25.0% |
| ! | ATTCTACCATCATTCATAAT+TGG | + | chr7_2:53581760-53581779 | Msa1062600:CDS | 25.0% |
| ! | ATTGCTAATTAAACTAACAG+GGG | + | chr7_2:53581910-53581929 | Msa1062600:intron | 25.0% |
| AGTTGAACATTTATGGAAGT+TGG | + | chr7_2:53580918-53580937 | Msa1062600:CDS | 30.0% | |
| TTTCTTCCATTAAATCAGCT+TGG | - | chr7_2:53580972-53580991 | None:intergenic | 30.0% | |
| TTTGATATATGATTGGGTAC+TGG | - | chr7_2:53581048-53581067 | None:intergenic | 30.0% | |
| TGATTAATGCATGAGCTTAT+AGG | - | chr7_2:53581127-53581146 | None:intergenic | 30.0% | |
| TAATCAAAATCCTCACATCA+TGG | + | chr7_2:53581141-53581160 | Msa1062600:intron | 30.0% | |
| AGTTGAACATTTATGGAAGT+TGG | + | chr7_2:53580918-53580937 | Msa1062600:CDS | 30.0% | |
| TTTCTTCCATTAAATCAGCT+TGG | - | chr7_2:53580972-53580991 | None:intergenic | 30.0% | |
| TTTGATATATGATTGGGTAC+TGG | - | chr7_2:53581048-53581067 | None:intergenic | 30.0% | |
| TGATTAATGCATGAGCTTAT+AGG | - | chr7_2:53581127-53581146 | None:intergenic | 30.0% | |
| TAATCAAAATCCTCACATCA+TGG | + | chr7_2:53581141-53581160 | Msa1062600:intron | 30.0% | |
| GAATGCAAAGTATGTGTAAC+AGG | + | chr7_2:53580707-53580726 | Msa1062600:CDS | 35.0% | |
| ! | ATGAAGCGACTTCTTTTGTT+TGG | + | chr7_2:53580758-53580777 | Msa1062600:CDS | 35.0% |
| TGAACATTTATGGAAGTTGG+AGG | + | chr7_2:53580921-53580940 | Msa1062600:CDS | 35.0% | |
| GAACATTTATGGAAGTTGGA+GGG | + | chr7_2:53580922-53580941 | Msa1062600:CDS | 35.0% | |
| ! | ACTAGTCCAAGCTGATTTAA+TGG | + | chr7_2:53580963-53580982 | Msa1062600:CDS | 35.0% |
| ! | CAAGATTTCTGCCTGTATTT+TGG | - | chr7_2:53581233-53581252 | None:intergenic | 35.0% |
| CAAAATACAGGCAGAAATCT+TGG | + | chr7_2:53581231-53581250 | Msa1062600:intron | 35.0% | |
| GACTCATCTATTGGTATGTT+TGG | - | chr7_2:53581373-53581392 | None:intergenic | 35.0% | |
| TACCAATAGATGAGTCATCT+TGG | + | chr7_2:53581377-53581396 | Msa1062600:intron | 35.0% | |
| CATGTTATTGAATTAGGGCA+TGG | + | chr7_2:53581662-53581681 | Msa1062600:intron | 35.0% | |
| TGGGAATATTGCAATGAGAA+AGG | + | chr7_2:53581721-53581740 | Msa1062600:CDS | 35.0% | |
| CAATGAGAAAGGAATAGACT+TGG | + | chr7_2:53581732-53581751 | Msa1062600:CDS | 35.0% | |
| CTAGGTCCAATTATGAATGA+TGG | - | chr7_2:53581769-53581788 | None:intergenic | 35.0% | |
| CATAAATATGTTGGCAAGCT+AGG | - | chr7_2:53581787-53581806 | None:intergenic | 35.0% | |
| GCAGTGGAACATAAATATGT+TGG | - | chr7_2:53581796-53581815 | None:intergenic | 35.0% | |
| GGGAAACAGAGAAATTTCAA+TGG | + | chr7_2:53581930-53581949 | Msa1062600:CDS | 35.0% | |
| ACAGAGAAATTTCAATGGCA+TGG | + | chr7_2:53581935-53581954 | Msa1062600:CDS | 35.0% | |
| AGAAATTTCAATGGCATGGA+AGG | + | chr7_2:53581939-53581958 | Msa1062600:CDS | 35.0% | |
| !! | AGGCTTTGTTCTCATAAAGA+AGG | - | chr7_2:53582006-53582025 | None:intergenic | 35.0% |
| CAATTATTGCTGAACTGCAA+AGG | - | chr7_2:53582042-53582061 | None:intergenic | 35.0% | |
| GAATGCAAAGTATGTGTAAC+AGG | + | chr7_2:53580707-53580726 | Msa1062600:CDS | 35.0% | |
| ! | ATGAAGCGACTTCTTTTGTT+TGG | + | chr7_2:53580758-53580777 | Msa1062600:CDS | 35.0% |
| TGAACATTTATGGAAGTTGG+AGG | + | chr7_2:53580921-53580940 | Msa1062600:CDS | 35.0% | |
| GAACATTTATGGAAGTTGGA+GGG | + | chr7_2:53580922-53580941 | Msa1062600:CDS | 35.0% | |
| ! | ACTAGTCCAAGCTGATTTAA+TGG | + | chr7_2:53580963-53580982 | Msa1062600:CDS | 35.0% |
| ! | CAAGATTTCTGCCTGTATTT+TGG | - | chr7_2:53581233-53581252 | None:intergenic | 35.0% |
| CAAAATACAGGCAGAAATCT+TGG | + | chr7_2:53581231-53581250 | Msa1062600:intron | 35.0% | |
| GACTCATCTATTGGTATGTT+TGG | - | chr7_2:53581373-53581392 | None:intergenic | 35.0% | |
| TACCAATAGATGAGTCATCT+TGG | + | chr7_2:53581377-53581396 | Msa1062600:intron | 35.0% | |
| CATGTTATTGAATTAGGGCA+TGG | + | chr7_2:53581662-53581681 | Msa1062600:intron | 35.0% | |
| TGGGAATATTGCAATGAGAA+AGG | + | chr7_2:53581721-53581740 | Msa1062600:CDS | 35.0% | |
| CAATGAGAAAGGAATAGACT+TGG | + | chr7_2:53581732-53581751 | Msa1062600:CDS | 35.0% | |
| CTAGGTCCAATTATGAATGA+TGG | - | chr7_2:53581769-53581788 | None:intergenic | 35.0% | |
| CATAAATATGTTGGCAAGCT+AGG | - | chr7_2:53581787-53581806 | None:intergenic | 35.0% | |
| GCAGTGGAACATAAATATGT+TGG | - | chr7_2:53581796-53581815 | None:intergenic | 35.0% | |
| GGGAAACAGAGAAATTTCAA+TGG | + | chr7_2:53581930-53581949 | Msa1062600:CDS | 35.0% | |
| ACAGAGAAATTTCAATGGCA+TGG | + | chr7_2:53581935-53581954 | Msa1062600:CDS | 35.0% | |
| AGAAATTTCAATGGCATGGA+AGG | + | chr7_2:53581939-53581958 | Msa1062600:CDS | 35.0% | |
| !! | AGGCTTTGTTCTCATAAAGA+AGG | - | chr7_2:53582006-53582025 | None:intergenic | 35.0% |
| CAATTATTGCTGAACTGCAA+AGG | - | chr7_2:53582042-53582061 | None:intergenic | 35.0% | |
| ACTAGTTCGAGTCTTTCTGT+TGG | - | chr7_2:53580949-53580968 | None:intergenic | 40.0% | |
| TAGCTTCGACAATGCGATTA+TGG | + | chr7_2:53580993-53581012 | Msa1062600:CDS | 40.0% | |
| AGCTTCGACAATGCGATTAT+GGG | + | chr7_2:53580994-53581013 | Msa1062600:CDS | 40.0% | |
| AATGCGATTATGGGATGCAA+AGG | + | chr7_2:53581003-53581022 | Msa1062600:CDS | 40.0% | |
| !! | TATATGATTGGGTACTGGAG+AGG | - | chr7_2:53581043-53581062 | None:intergenic | 40.0% |
| TGTATAGTCTCCATGATGTG+AGG | - | chr7_2:53581154-53581173 | None:intergenic | 40.0% | |
| CTCCAAGATGACTCATCTAT+TGG | - | chr7_2:53581382-53581401 | None:intergenic | 40.0% | |
| TACTTGAGGAAATGTGTACC+TGG | - | chr7_2:53581429-53581448 | None:intergenic | 40.0% | |
| ATTTCAATGGCATGGAAGGA+TGG | + | chr7_2:53581943-53581962 | Msa1062600:CDS | 40.0% | |
| TTTCAATGGCATGGAAGGAT+GGG | + | chr7_2:53581944-53581963 | Msa1062600:CDS | 40.0% | |
| TATGAGAACAAAGCCTCTCA+TGG | + | chr7_2:53582010-53582029 | Msa1062600:CDS | 40.0% | |
| !! | AGGATAACGATTTGCTAGCA+TGG | - | chr7_2:53582083-53582102 | None:intergenic | 40.0% |
| ATGCTAGCAAATCGTTATCC+TGG | + | chr7_2:53582082-53582101 | Msa1062600:CDS | 40.0% | |
| !! | ACACTCTACCTTTTGGGAAT+GGG | - | chr7_2:53582111-53582130 | None:intergenic | 40.0% |
| ACTAGTTCGAGTCTTTCTGT+TGG | - | chr7_2:53580949-53580968 | None:intergenic | 40.0% | |
| TAGCTTCGACAATGCGATTA+TGG | + | chr7_2:53580993-53581012 | Msa1062600:CDS | 40.0% | |
| AGCTTCGACAATGCGATTAT+GGG | + | chr7_2:53580994-53581013 | Msa1062600:CDS | 40.0% | |
| AATGCGATTATGGGATGCAA+AGG | + | chr7_2:53581003-53581022 | Msa1062600:CDS | 40.0% | |
| !! | TATATGATTGGGTACTGGAG+AGG | - | chr7_2:53581043-53581062 | None:intergenic | 40.0% |
| TGTATAGTCTCCATGATGTG+AGG | - | chr7_2:53581154-53581173 | None:intergenic | 40.0% | |
| CTCCAAGATGACTCATCTAT+TGG | - | chr7_2:53581382-53581401 | None:intergenic | 40.0% | |
| TACTTGAGGAAATGTGTACC+TGG | - | chr7_2:53581429-53581448 | None:intergenic | 40.0% | |
| ATTTCAATGGCATGGAAGGA+TGG | + | chr7_2:53581943-53581962 | Msa1062600:CDS | 40.0% | |
| TTTCAATGGCATGGAAGGAT+GGG | + | chr7_2:53581944-53581963 | Msa1062600:CDS | 40.0% | |
| TATGAGAACAAAGCCTCTCA+TGG | + | chr7_2:53582010-53582029 | Msa1062600:CDS | 40.0% | |
| !! | AGGATAACGATTTGCTAGCA+TGG | - | chr7_2:53582083-53582102 | None:intergenic | 40.0% |
| ATGCTAGCAAATCGTTATCC+TGG | + | chr7_2:53582082-53582101 | Msa1062600:CDS | 40.0% | |
| !! | ACACTCTACCTTTTGGGAAT+GGG | - | chr7_2:53582111-53582130 | None:intergenic | 40.0% |
| GTATGTGTAACAGGAGCTTC+AGG | + | chr7_2:53580716-53580735 | Msa1062600:CDS | 45.0% | |
| ! | AACAGGAGCTTCAGGCTTTT+TGG | + | chr7_2:53580724-53580743 | Msa1062600:CDS | 45.0% |
| !!! | CTTCAGGCTTTTTGGCTTCT+TGG | + | chr7_2:53580732-53580751 | Msa1062600:CDS | 45.0% |
| GCAACACATTTAGCGTACCT+TGG | - | chr7_2:53581267-53581286 | None:intergenic | 45.0% | |
| GGCTAACACAACTCGAACAA+GGG | - | chr7_2:53581311-53581330 | None:intergenic | 45.0% | |
| ACTAACAGCTGAAGATGACG+CGG | - | chr7_2:53581332-53581351 | None:intergenic | 45.0% | |
| TGAGTCATCTTGGAGCTCAT+AGG | + | chr7_2:53581387-53581406 | Msa1062600:intron | 45.0% | |
| GGAATTGTGTGAGAAACTCC+AGG | + | chr7_2:53581408-53581427 | Msa1062600:intron | 45.0% | |
| TTGAATTAGGGCATGGTACC+CGG | + | chr7_2:53581669-53581688 | Msa1062600:intron | 45.0% | |
| ACTGGCAGAAAAAGCAGCTT+GGG | + | chr7_2:53581702-53581721 | Msa1062600:CDS | 45.0% | |
| ! | GATGTGCTAGGCTTGTTCAA+AGG | + | chr7_2:53581820-53581839 | Msa1062600:CDS | 45.0% |
| AGAACAAAGCCTCTCATGGT+AGG | + | chr7_2:53582014-53582033 | Msa1062600:CDS | 45.0% | |
| !! | GACACTCTACCTTTTGGGAA+TGG | - | chr7_2:53582112-53582131 | None:intergenic | 45.0% |
| ! | GCAAGGACACTCTACCTTTT+GGG | - | chr7_2:53582117-53582136 | None:intergenic | 45.0% |
| ! | TAGAGTGTCCTTGCGTTTCA+CGG | + | chr7_2:53582123-53582142 | Msa1062600:CDS | 45.0% |
| GTATGTGTAACAGGAGCTTC+AGG | + | chr7_2:53580716-53580735 | Msa1062600:CDS | 45.0% | |
| ! | AACAGGAGCTTCAGGCTTTT+TGG | + | chr7_2:53580724-53580743 | Msa1062600:CDS | 45.0% |
| !!! | CTTCAGGCTTTTTGGCTTCT+TGG | + | chr7_2:53580732-53580751 | Msa1062600:CDS | 45.0% |
| GCAACACATTTAGCGTACCT+TGG | - | chr7_2:53581267-53581286 | None:intergenic | 45.0% | |
| GGCTAACACAACTCGAACAA+GGG | - | chr7_2:53581311-53581330 | None:intergenic | 45.0% | |
| ACTAACAGCTGAAGATGACG+CGG | - | chr7_2:53581332-53581351 | None:intergenic | 45.0% | |
| TGAGTCATCTTGGAGCTCAT+AGG | + | chr7_2:53581387-53581406 | Msa1062600:intron | 45.0% | |
| GGAATTGTGTGAGAAACTCC+AGG | + | chr7_2:53581408-53581427 | Msa1062600:intron | 45.0% | |
| TTGAATTAGGGCATGGTACC+CGG | + | chr7_2:53581669-53581688 | Msa1062600:intron | 45.0% | |
| ACTGGCAGAAAAAGCAGCTT+GGG | + | chr7_2:53581702-53581721 | Msa1062600:CDS | 45.0% | |
| ! | GATGTGCTAGGCTTGTTCAA+AGG | + | chr7_2:53581820-53581839 | Msa1062600:CDS | 45.0% |
| AGAACAAAGCCTCTCATGGT+AGG | + | chr7_2:53582014-53582033 | Msa1062600:CDS | 45.0% | |
| !! | GACACTCTACCTTTTGGGAA+TGG | - | chr7_2:53582112-53582131 | None:intergenic | 45.0% |
| ! | GCAAGGACACTCTACCTTTT+GGG | - | chr7_2:53582117-53582136 | None:intergenic | 45.0% |
| ! | TAGAGTGTCCTTGCGTTTCA+CGG | + | chr7_2:53582123-53582142 | Msa1062600:CDS | 45.0% |
| !!! | TTTTTTTTATATTTTACAAA+TGG | + | chr7_2:53581614-53581633 | Msa1062600:intron | 5.0% |
| !!! | TTTTTTTTATATTTTACAAA+TGG | + | chr7_2:53581614-53581633 | Msa1062600:intron | 5.0% |
| GGCAGAAATCTTGGAACCAG+CGG | + | chr7_2:53581240-53581259 | Msa1062600:intron | 50.0% | |
| AACACAACTCGAACAAGGGC+TGG | - | chr7_2:53581307-53581326 | None:intergenic | 50.0% | |
| CGGCTAACACAACTCGAACA+AGG | - | chr7_2:53581312-53581331 | None:intergenic | 50.0% | |
| !! | TCTGCCAGTGTCTTTGAGAC+CGG | - | chr7_2:53581691-53581710 | None:intergenic | 50.0% |
| CACTGGCAGAAAAAGCAGCT+TGG | + | chr7_2:53581701-53581720 | Msa1062600:CDS | 50.0% | |
| TCCACTGCATCTGATGTGCT+AGG | + | chr7_2:53581808-53581827 | Msa1062600:CDS | 50.0% | |
| !! | GCAAAGGTACCTACCATGAG+AGG | - | chr7_2:53582026-53582045 | None:intergenic | 50.0% |
| !! | CCTTTTGGGAATGGGAAACC+AGG | - | chr7_2:53582103-53582122 | None:intergenic | 50.0% |
| CCTGGTTTCCCATTCCCAAA+AGG | + | chr7_2:53582100-53582119 | Msa1062600:CDS | 50.0% | |
| ! | CGCAAGGACACTCTACCTTT+TGG | - | chr7_2:53582118-53582137 | None:intergenic | 50.0% |
| GGCAGAAATCTTGGAACCAG+CGG | + | chr7_2:53581240-53581259 | Msa1062600:intron | 50.0% | |
| AACACAACTCGAACAAGGGC+TGG | - | chr7_2:53581307-53581326 | None:intergenic | 50.0% | |
| CGGCTAACACAACTCGAACA+AGG | - | chr7_2:53581312-53581331 | None:intergenic | 50.0% | |
| !! | TCTGCCAGTGTCTTTGAGAC+CGG | - | chr7_2:53581691-53581710 | None:intergenic | 50.0% |
| CACTGGCAGAAAAAGCAGCT+TGG | + | chr7_2:53581701-53581720 | Msa1062600:CDS | 50.0% | |
| TCCACTGCATCTGATGTGCT+AGG | + | chr7_2:53581808-53581827 | Msa1062600:CDS | 50.0% | |
| !! | GCAAAGGTACCTACCATGAG+AGG | - | chr7_2:53582026-53582045 | None:intergenic | 50.0% |
| !! | CCTTTTGGGAATGGGAAACC+AGG | - | chr7_2:53582103-53582122 | None:intergenic | 50.0% |
| CCTGGTTTCCCATTCCCAAA+AGG | + | chr7_2:53582100-53582119 | Msa1062600:CDS | 50.0% | |
| ! | CGCAAGGACACTCTACCTTT+TGG | - | chr7_2:53582118-53582137 | None:intergenic | 50.0% |
| ATCTTGGAACCAGCGGTCCA+AGG | + | chr7_2:53581247-53581266 | Msa1062600:CDS | 55.0% | |
| TTTAGCGTACCTTGGACCGC+TGG | - | chr7_2:53581259-53581278 | None:intergenic | 55.0% | |
| GTACCCGGTCTCAAAGACAC+TGG | + | chr7_2:53581684-53581703 | Msa1062600:CDS | 55.0% | |
| !! | CTGCCAGTGTCTTTGAGACC+GGG | - | chr7_2:53581690-53581709 | None:intergenic | 55.0% |
| GCCTAGCACATCAGATGCAG+TGG | - | chr7_2:53581812-53581831 | None:intergenic | 55.0% | |
| AGTGTCCTTGCGTTTCACGG+TGG | + | chr7_2:53582126-53582145 | Msa1062600:CDS | 55.0% | |
| GTGAACCACCGTGAAACGCA+AGG | - | chr7_2:53582134-53582153 | None:intergenic | 55.0% | |
| ATCTTGGAACCAGCGGTCCA+AGG | + | chr7_2:53581247-53581266 | Msa1062600:CDS | 55.0% | |
| TTTAGCGTACCTTGGACCGC+TGG | - | chr7_2:53581259-53581278 | None:intergenic | 55.0% | |
| GTACCCGGTCTCAAAGACAC+TGG | + | chr7_2:53581684-53581703 | Msa1062600:CDS | 55.0% | |
| !! | CTGCCAGTGTCTTTGAGACC+GGG | - | chr7_2:53581690-53581709 | None:intergenic | 55.0% |
| GCCTAGCACATCAGATGCAG+TGG | - | chr7_2:53581812-53581831 | None:intergenic | 55.0% | |
| AGTGTCCTTGCGTTTCACGG+TGG | + | chr7_2:53582126-53582145 | Msa1062600:CDS | 55.0% | |
| GTGAACCACCGTGAAACGCA+AGG | - | chr7_2:53582134-53582153 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 53580704 | 53582177 | 53580704 | ID=Msa1062600;Name=Msa1062600 |
| chr7_2 | mRNA | 53580704 | 53582177 | 53580704 | ID=Msa1062600-mRNA-1;Parent=Msa1062600;Name=Msa1062600-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|0.83|1|1|6|0|274 |
| chr7_2 | exon | 53580704 | 53580812 | 53580704 | ID=Msa1062600-mRNA-1:exon:9690;Parent=Msa1062600-mRNA-1 |
| chr7_2 | exon | 53580905 | 53581077 | 53580905 | ID=Msa1062600-mRNA-1:exon:9691;Parent=Msa1062600-mRNA-1 |
| chr7_2 | exon | 53581241 | 53581351 | 53581241 | ID=Msa1062600-mRNA-1:exon:9692;Parent=Msa1062600-mRNA-1 |
| chr7_2 | exon | 53581580 | 53581599 | 53581580 | ID=Msa1062600-mRNA-1:exon:9693;Parent=Msa1062600-mRNA-1 |
| chr7_2 | exon | 53581678 | 53581841 | 53581678 | ID=Msa1062600-mRNA-1:exon:9694;Parent=Msa1062600-mRNA-1 |
| chr7_2 | exon | 53581930 | 53582177 | 53581930 | ID=Msa1062600-mRNA-1:exon:9695;Parent=Msa1062600-mRNA-1 |
| chr7_2 | CDS | 53580704 | 53580812 | 53580704 | ID=Msa1062600-mRNA-1:cds;Parent=Msa1062600-mRNA-1 |
| chr7_2 | CDS | 53580905 | 53581077 | 53580905 | ID=Msa1062600-mRNA-1:cds;Parent=Msa1062600-mRNA-1 |
| chr7_2 | CDS | 53581241 | 53581351 | 53581241 | ID=Msa1062600-mRNA-1:cds;Parent=Msa1062600-mRNA-1 |
| chr7_2 | CDS | 53581580 | 53581599 | 53581580 | ID=Msa1062600-mRNA-1:cds;Parent=Msa1062600-mRNA-1 |
| chr7_2 | CDS | 53581678 | 53581841 | 53581678 | ID=Msa1062600-mRNA-1:cds;Parent=Msa1062600-mRNA-1 |
| chr7_2 | CDS | 53581930 | 53582177 | 53581930 | ID=Msa1062600-mRNA-1:cds;Parent=Msa1062600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
