Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639110 | XP_013457200.1 | 99.479 | 384 | 2 | 0 | 1 | 384 | 1 | 384 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639110 | sp|Q66KH2|ERGI3_XENLA | 48.969 | 388 | 188 | 4 | 3 | 382 | 2 | 387 | 2.83e-132 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639110 | A0A072UPC6 | 99.479 | 384 | 2 | 0 | 1 | 384 | 1 | 384 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004480 | Msa0639110 | 0.802821 | 4.675959e-49 | -8.615850e-47 |
| Msa0011920 | Msa0639110 | -0.824467 | 7.945859e-54 | -8.615850e-47 |
| Msa0016710 | Msa0639110 | 0.808622 | 2.829613e-50 | -8.615850e-47 |
| Msa0017300 | Msa0639110 | -0.821440 | 4.032201e-53 | -8.615850e-47 |
| Msa0037180 | Msa0639110 | 0.839119 | 1.916630e-57 | -8.615850e-47 |
| Msa0044720 | Msa0639110 | 0.840156 | 1.030271e-57 | -8.615850e-47 |
| Msa0052780 | Msa0639110 | 0.806199 | 9.235698e-50 | -8.615850e-47 |
| Msa0067590 | Msa0639110 | -0.803968 | 2.705893e-49 | -8.615850e-47 |
| Msa0074860 | Msa0639110 | -0.806302 | 8.787911e-50 | -8.615850e-47 |
| Msa0075990 | Msa0639110 | -0.826757 | 2.277212e-54 | -8.615850e-47 |
| Msa0081610 | Msa0639110 | -0.827526 | 1.490064e-54 | -8.615850e-47 |
| Msa0081700 | Msa0639110 | -0.801675 | 8.051562e-49 | -8.615850e-47 |
| Msa0092220 | Msa0639110 | 0.819500 | 1.124390e-52 | -8.615850e-47 |
| Msa0097570 | Msa0639110 | 0.806314 | 8.735880e-50 | -8.615850e-47 |
| Msa0098500 | Msa0639110 | -0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0105480 | Msa0639110 | -0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0115940 | Msa0639110 | 0.800676 | 1.288979e-48 | -8.615850e-47 |
| Msa0611060 | Msa0639110 | 0.801269 | 9.751756e-49 | -8.615850e-47 |
| Msa0614480 | Msa0639110 | 0.938968 | 2.791716e-99 | -8.615850e-47 |
| Msa0617470 | Msa0639110 | -0.800905 | 1.157329e-48 | -8.615850e-47 |
| Msa0639110 | Msa0639530 | -0.812889 | 3.378246e-51 | -8.615850e-47 |
| Msa0639110 | Msa0690100 | -0.800580 | 1.348236e-48 | -8.615850e-47 |
| Msa0639110 | Msa0697680 | 0.878213 | 3.368241e-69 | -8.615850e-47 |
| Msa0639110 | Msa0713060 | 0.833448 | 5.303094e-56 | -8.615850e-47 |
| Msa0639110 | Msa0737030 | 0.811826 | 5.765436e-51 | -8.615850e-47 |
| Msa0639110 | Msa0737430 | 0.820611 | 6.258976e-53 | -8.615850e-47 |
| Msa0639110 | Msa0772490 | 0.832040 | 1.185991e-55 | -8.615850e-47 |
| Msa0639110 | Msa0816630 | 0.827172 | 1.811688e-54 | -8.615850e-47 |
| Msa0639110 | Msa0826380 | 0.829577 | 4.763277e-55 | -8.615850e-47 |
| Msa0639110 | Msa0826450 | 0.824410 | 8.196802e-54 | -8.615850e-47 |
| Msa0639110 | Msa0856020 | 0.809651 | 1.703243e-50 | -8.615850e-47 |
| Msa0639110 | Msa0863940 | 0.814946 | 1.188703e-51 | -8.615850e-47 |
| Msa0639110 | Msa0869320 | -0.800045 | 1.732722e-48 | -8.615850e-47 |
| Msa0639110 | Msa0924690 | -0.814315 | 1.640038e-51 | -8.615850e-47 |
| Msa0639110 | Msa0934290 | -0.819019 | 1.447084e-52 | -8.615850e-47 |
| Msa0639110 | Msa0963800 | -0.813702 | 2.238685e-51 | -8.615850e-47 |
| Msa0639110 | Msa0969380 | 0.824794 | 6.654053e-54 | -8.615850e-47 |
| Msa0639110 | Msa0969720 | 0.818795 | 1.626517e-52 | -8.615850e-47 |
| Msa0639110 | Msa0971780 | -0.824607 | 7.365969e-54 | -8.615850e-47 |
| Msa0639110 | Msa1029030 | -0.801867 | 7.351529e-49 | -8.615850e-47 |
| Msa0639110 | Msa1052000 | 0.826602 | 2.479559e-54 | -8.615850e-47 |
| Msa0639110 | Msa1055520 | -0.816436 | 5.536643e-52 | -8.615850e-47 |
| Msa0639110 | Msa1063390 | 0.807964 | 3.907324e-50 | -8.615850e-47 |
| Msa0639110 | Msa1088000 | -0.803691 | 3.089694e-49 | -8.615850e-47 |
| Msa0639110 | Msa1096760 | 0.805313 | 1.417779e-49 | -8.615850e-47 |
| Msa0639110 | Msa1117770 | -0.808468 | 3.051628e-50 | -8.615850e-47 |
| Msa0639110 | Msa1121720 | -0.821797 | 3.335515e-53 | -8.615850e-47 |
| Msa0639110 | Msa1156120 | -0.804924 | 1.710204e-49 | -8.615850e-47 |
| Msa0639110 | Msa1173150 | 0.807180 | 5.732168e-50 | -8.615850e-47 |
| Msa0639110 | Msa1181370 | -0.804484 | 2.112559e-49 | -8.615850e-47 |
| Msa0639110 | Msa1188350 | 0.802619 | 5.147788e-49 | -8.615850e-47 |
| Msa0639110 | Msa1196110 | 0.808610 | 2.845431e-50 | -8.615850e-47 |
| Msa0639110 | Msa1199870 | 0.842210 | 2.970910e-58 | -8.615850e-47 |
| Msa0639110 | Msa1202470 | 0.829146 | 6.060557e-55 | -8.615850e-47 |
| Msa0639110 | Msa1212470 | 0.802010 | 6.872023e-49 | -8.615850e-47 |
| Msa0639110 | Msa1218160 | 0.805449 | 1.327900e-49 | -8.615850e-47 |
| Msa0639110 | Msa1221960 | 0.822928 | 1.821639e-53 | -8.615850e-47 |
| Msa0639110 | Msa1236120 | -0.804347 | 2.256368e-49 | -8.615850e-47 |
| Msa0639110 | Msa1236190 | -0.823046 | 1.710333e-53 | -8.615850e-47 |
| Msa0639110 | Msa1249600 | 0.845211 | 4.676774e-59 | -8.615850e-47 |
| Msa0639110 | Msa1252810 | 0.839573 | 1.461994e-57 | -8.615850e-47 |
| Msa0639110 | Msa1265020 | 0.818676 | 1.731054e-52 | -8.615850e-47 |
| Msa0639110 | Msa1273620 | -0.814114 | 1.816989e-51 | -8.615850e-47 |
| Msa0639110 | Msa1299200 | 0.806536 | 7.843170e-50 | -8.615850e-47 |
| Msa0639110 | Msa1304790 | 0.837603 | 4.715195e-57 | -8.615850e-47 |
| Msa0639110 | Msa1309760 | 0.803892 | 2.806272e-49 | -8.615850e-47 |
| Msa0639110 | Msa1326180 | 0.808484 | 3.027174e-50 | -8.615850e-47 |
| Msa0639110 | Msa1328240 | 0.816262 | 6.056026e-52 | -8.615850e-47 |
| Msa0639110 | Msa1337850 | 0.807353 | 5.268487e-50 | -8.615850e-47 |
| Msa0639110 | Msa1356100 | -0.820143 | 8.013547e-53 | -8.615850e-47 |
| Msa0639110 | Msa1360260 | 0.805222 | 1.481522e-49 | -8.615850e-47 |
| Msa0639110 | Msa1366390 | 0.815032 | 1.137678e-51 | -8.615850e-47 |
| Msa0639110 | Msa1373310 | -0.800701 | 1.274043e-48 | -8.615850e-47 |
| Msa0639110 | Msa1377980 | -0.806783 | 6.956150e-50 | -8.615850e-47 |
| Msa0639110 | Msa1379020 | 0.803750 | 3.003189e-49 | -8.615850e-47 |
| Msa0639110 | Msa1384410 | -0.803581 | 3.255339e-49 | -8.615850e-47 |
| Msa0639110 | Msa1389670 | -0.809505 | 1.830874e-50 | -8.615850e-47 |
| Msa0639110 | Msa1403690 | 0.807971 | 3.895045e-50 | -8.615850e-47 |
| Msa0639110 | Msa1408280 | -0.804837 | 1.783234e-49 | -8.615850e-47 |
| Msa0639110 | Msa1410480 | -0.820890 | 5.399950e-53 | -8.615850e-47 |
| Msa0639110 | Msa1410500 | -0.805477 | 1.310060e-49 | -8.615850e-47 |
| Msa0639110 | Msa1411370 | 0.802516 | 5.407288e-49 | -8.615850e-47 |
| Msa0639110 | Msa1413150 | 0.811261 | 7.648444e-51 | -8.615850e-47 |
| Msa0639110 | Msa1429470 | 0.810715 | 1.004382e-50 | -8.615850e-47 |
| Msa0639110 | Msa1453430 | 0.857854 | 1.228989e-62 | -8.615850e-47 |
| Msa0639110 | Msa1457080 | 0.806581 | 7.672267e-50 | -8.615850e-47 |
| Msa0127910 | Msa0639110 | -0.831237 | 1.871011e-55 | -8.615850e-47 |
| Msa0138990 | Msa0639110 | -0.810532 | 1.099830e-50 | -8.615850e-47 |
| Msa0145430 | Msa0639110 | 0.834184 | 3.470296e-56 | -8.615850e-47 |
| Msa0168770 | Msa0639110 | -0.832792 | 7.722475e-56 | -8.615850e-47 |
| Msa0173950 | Msa0639110 | -0.820313 | 7.325994e-53 | -8.615850e-47 |
| Msa0174060 | Msa0639110 | -0.850869 | 1.284585e-60 | -8.615850e-47 |
| Msa0177320 | Msa0639110 | 0.848671 | 5.282162e-60 | -8.615850e-47 |
| Msa0178000 | Msa0639110 | 0.801659 | 8.111330e-49 | -8.615850e-47 |
| Msa0214150 | Msa0639110 | 0.801496 | 8.761767e-49 | -8.615850e-47 |
| Msa0216150 | Msa0639110 | -0.807312 | 5.375561e-50 | -8.615850e-47 |
| Msa0233920 | Msa0639110 | 0.804222 | 2.395446e-49 | -8.615850e-47 |
| Msa0380450 | Msa0639110 | -0.803625 | 3.187514e-49 | -8.615850e-47 |
| Msa0389080 | Msa0639110 | -0.815154 | 1.069117e-51 | -8.615850e-47 |
| Msa0390590 | Msa0639110 | -0.832245 | 1.055025e-55 | -8.615850e-47 |
| Msa0402800 | Msa0639110 | 0.807995 | 3.849757e-50 | -8.615850e-47 |
| Msa0428210 | Msa0639110 | 0.832472 | 9.270887e-56 | -8.615850e-47 |
| Msa0449620 | Msa0639110 | 0.812021 | 5.228837e-51 | -8.615850e-47 |
| Msa0458220 | Msa0639110 | 0.812319 | 4.500596e-51 | -8.615850e-47 |
| Msa0474570 | Msa0639110 | 0.811884 | 5.600386e-51 | -8.615850e-47 |
| Msa0476600 | Msa0639110 | -0.803664 | 3.128840e-49 | -8.615850e-47 |
| Msa0254470 | Msa0639110 | 0.817990 | 2.475128e-52 | -8.615850e-47 |
| Msa0261350 | Msa0639110 | -0.803068 | 4.159284e-49 | -8.615850e-47 |
| Msa0332780 | Msa0639110 | 0.822348 | 2.485778e-53 | -8.615850e-47 |
| Msa0334450 | Msa0639110 | -0.838671 | 2.503570e-57 | -8.615850e-47 |
| Msa0356580 | Msa0639110 | 0.802778 | 4.774401e-49 | -8.615850e-47 |
| Msa0497860 | Msa0639110 | 0.800139 | 1.657937e-48 | -8.615850e-47 |
| Msa0521260 | Msa0639110 | -0.814259 | 1.687386e-51 | -8.615850e-47 |
| Msa0560460 | Msa0639110 | 0.997044 | 5.074735e-236 | -8.615850e-47 |
| Msa0563440 | Msa0639110 | 0.823928 | 1.063575e-53 | -8.615850e-47 |
| Msa0572730 | Msa0639110 | -0.810592 | 1.067914e-50 | -8.615850e-47 |
| Msa0573950 | Msa0639110 | 0.823685 | 1.212628e-53 | -8.615850e-47 |
| Msa0576020 | Msa0639110 | -0.822598 | 2.174479e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639110 | MtrunA17_Chr4g0050511 | 99.479 | 384 | 2 | 0 | 1 | 384 | 1 | 384 | 0.0 | 795 |
| Msa0639110 | MtrunA17_Chr5g0425571 | 68.052 | 385 | 121 | 1 | 1 | 383 | 1 | 385 | 0.0 | 591 |
| Msa0639110 | MtrunA17_Chr3g0120271 | 35.890 | 365 | 201 | 8 | 8 | 368 | 7 | 342 | 7.09e-73 | 231 |
| Msa0639110 | MtrunA17_Chr2g0319621 | 30.151 | 199 | 108 | 7 | 202 | 382 | 237 | 422 | 4.15e-18 | 85.5 |
| Msa0639110 | MtrunA17_Chr4g0041801 | 33.166 | 199 | 102 | 8 | 202 | 382 | 290 | 475 | 6.14e-17 | 82.0 |
| Msa0639110 | MtrunA17_Chr4g0041801 | 33.645 | 107 | 70 | 1 | 6 | 111 | 5 | 111 | 1.94e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0639110 | AT1G36050.2 | 70.390 | 385 | 112 | 1 | 1 | 383 | 1 | 385 | 0.0 | 592 |
| Msa0639110 | AT1G36050.1 | 70.419 | 382 | 111 | 1 | 1 | 380 | 1 | 382 | 0.0 | 587 |
| Msa0639110 | AT1G22200.1 | 69.091 | 385 | 117 | 1 | 1 | 383 | 1 | 385 | 0.0 | 580 |
| Msa0639110 | AT1G22200.2 | 68.657 | 335 | 103 | 1 | 1 | 333 | 1 | 335 | 7.94e-179 | 500 |
| Msa0639110 | AT3G22290.2 | 36.483 | 381 | 201 | 10 | 4 | 377 | 3 | 349 | 1.61e-71 | 228 |
| Msa0639110 | AT3G22290.1 | 36.483 | 381 | 201 | 10 | 4 | 377 | 3 | 349 | 1.61e-71 | 228 |
| Msa0639110 | AT4G27080.1 | 30.631 | 222 | 122 | 9 | 179 | 382 | 271 | 478 | 1.00e-18 | 88.2 |
| Msa0639110 | AT4G27080.1 | 31.818 | 110 | 74 | 1 | 6 | 114 | 5 | 114 | 2.38e-13 | 71.6 |
| Msa0639110 | AT4G27080.2 | 30.631 | 222 | 122 | 9 | 179 | 382 | 323 | 530 | 1.14e-18 | 88.2 |
| Msa0639110 | AT4G27080.2 | 32.039 | 103 | 69 | 1 | 13 | 114 | 64 | 166 | 3.50e-11 | 65.1 |
| Msa0639110 | AT1G50950.2 | 37.037 | 108 | 67 | 1 | 6 | 112 | 5 | 112 | 7.29e-15 | 76.3 |
| Msa0639110 | AT1G50950.2 | 25.887 | 282 | 166 | 10 | 124 | 382 | 226 | 487 | 1.88e-11 | 65.9 |
| Msa0639110 | AT1G50950.1 | 37.037 | 108 | 67 | 1 | 6 | 112 | 5 | 112 | 7.54e-15 | 76.3 |
| Msa0639110 | AT1G50950.1 | 25.887 | 282 | 166 | 10 | 124 | 382 | 221 | 482 | 2.06e-11 | 65.9 |
| Msa0639110 | AT3G20560.1 | 28.856 | 201 | 111 | 7 | 202 | 382 | 293 | 481 | 2.40e-14 | 74.7 |
| Msa0639110 | AT3G20560.1 | 35.185 | 108 | 69 | 1 | 6 | 112 | 5 | 112 | 1.02e-13 | 72.8 |
Find 115 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTACTCTTACCTTTAT+TGG | 0.086581 | 4_3:-34743123 | None:intergenic |
| GATGATTACATTGATGTTTA+AGG | 0.116866 | 4_3:-34738271 | None:intergenic |
| TCTTCAGTCAGCTATCTTTC+TGG | 0.129021 | 4_3:+34740972 | Msa0639110:CDS |
| TAATGCTTTGCAGGATAAAA+TGG | 0.150023 | 4_3:+34742485 | Msa0639110:intron |
| AAGTTAAAATCTAAATATTT+TGG | 0.197426 | 4_3:+34744404 | Msa0639110:three_prime_UTR |
| GGCTGATCTACTTGCTTTGC+AGG | 0.231010 | 4_3:+34740993 | Msa0639110:CDS |
| CTTCAACAAGCTCCGCAATT+TGG | 0.259431 | 4_3:+34737185 | Msa0639110:CDS |
| TACAAACCTTTATGAAATAT+TGG | 0.288463 | 4_3:-34742534 | None:intergenic |
| CAGATCAACAAATTAAGTTT+TGG | 0.299273 | 4_3:+34741174 | Msa0639110:CDS |
| ACCAATATTTGTGCAATCAT+TGG | 0.300995 | 4_3:+34743963 | Msa0639110:CDS |
| AAATATTGTGGTTCTTGTTT+TGG | 0.315971 | 4_3:+34739194 | Msa0639110:CDS |
| GTGGATTCATCAATATATTA+TGG | 0.317761 | 4_3:+34744118 | Msa0639110:CDS |
| TTCTTCAAAATACATGAAAA+TGG | 0.323539 | 4_3:-34744369 | None:intergenic |
| TTCGGTGCTTGTGAAGCTTT+TGG | 0.332034 | 4_3:+34737142 | Msa0639110:five_prime_UTR |
| TCCAATGATTGCACAAATAT+TGG | 0.332241 | 4_3:-34743964 | None:intergenic |
| AGAACTGGGTGCTGCAGTTC+CGG | 0.349349 | 4_3:+34743074 | Msa0639110:CDS |
| GAAAATTTAATAAACAAGAT+AGG | 0.363581 | 4_3:-34744434 | None:intergenic |
| GAACTGGGTGCTGCAGTTCC+GGG | 0.369702 | 4_3:+34743075 | Msa0639110:CDS |
| GCTCCGTCGGCGACGGTGGC+CGG | 0.369708 | 4_3:-34737088 | None:intergenic |
| TGTTACAGAGAGTAAGCTTT+TGG | 0.377097 | 4_3:+34738227 | Msa0639110:CDS |
| GGGATGGGCACTGACAAATA+TGG | 0.383809 | 4_3:+34740560 | Msa0639110:CDS |
| CTATGACATATCTCCAATAA+AGG | 0.384793 | 4_3:+34743110 | Msa0639110:CDS |
| GCATTTCAAGAGTTCAGAAC+TGG | 0.386769 | 4_3:+34743059 | Msa0639110:CDS |
| AAACAAAGAATTGATGCTAA+TGG | 0.405935 | 4_3:+34738750 | Msa0639110:CDS |
| GGATTGGTTAATCCTCTTGA+TGG | 0.406458 | 4_3:+34741210 | Msa0639110:CDS |
| TTATCATATTCCTCACAATT+CGG | 0.408460 | 4_3:+34737124 | Msa0639110:five_prime_UTR |
| TGTTGAGGAAATTGATGAAT+TGG | 0.414891 | 4_3:-34737051 | None:intergenic |
| ATAGGTATATTCACAATTGC+GGG | 0.416093 | 4_3:+34744091 | Msa0639110:intron |
| ATCAAGAAGAAGATGGAGAT+TGG | 0.425527 | 4_3:+34744151 | Msa0639110:CDS |
| CAAAGTGATAGAAGCTAGAA+AGG | 0.432471 | 4_3:+34738773 | Msa0639110:CDS |
| GGTGAAGGATGCAATATTCA+TGG | 0.439184 | 4_3:+34740892 | Msa0639110:CDS |
| AATTGTGAGGAATATGATAA+AGG | 0.440533 | 4_3:-34737121 | None:intergenic |
| AACTTAATTTGTTGATCTGA+TGG | 0.440792 | 4_3:-34741170 | None:intergenic |
| TCGTGTTATATATTCAAATC+AGG | 0.444045 | 4_3:+34742938 | Msa0639110:CDS |
| AAATATGGATTTGATCGATC+AGG | 0.446849 | 4_3:+34740575 | Msa0639110:CDS |
| AAGAAGTTCGTGAGGCATAT+AGG | 0.446884 | 4_3:+34740532 | Msa0639110:CDS |
| TCAAGAGGATTAACCAATCC+AGG | 0.448600 | 4_3:-34741207 | None:intergenic |
| CATGTACCAATATTTCATAA+AGG | 0.449326 | 4_3:+34742528 | Msa0639110:CDS |
| ATCTGCTCATGACTTGTACT+TGG | 0.452726 | 4_3:+34744240 | Msa0639110:three_prime_UTR |
| CCTGCCACCATGTTTCTGTA+AGG | 0.455242 | 4_3:-34739156 | None:intergenic |
| CGGCGCTCCGTCGGCGACGG+TGG | 0.457183 | 4_3:-34737092 | None:intergenic |
| TTAGACACAATGGATATTAG+TGG | 0.459541 | 4_3:+34738587 | Msa0639110:CDS |
| ACATGCCATGATCATTTCCT+TGG | 0.466746 | 4_3:-34742510 | None:intergenic |
| GAATATGATAAAGGCGATAA+CGG | 0.468626 | 4_3:-34737112 | None:intergenic |
| GAAGCTAGAAAGGAAGGAAT+TGG | 0.469298 | 4_3:+34738783 | Msa0639110:CDS |
| ACAGTATACACGGACATTAG+AGG | 0.477413 | 4_3:+34742915 | Msa0639110:CDS |
| TGGTCACCATTACCCTGGAT+TGG | 0.479452 | 4_3:+34741194 | Msa0639110:CDS |
| AAGAATGAAGAAAGACTGAA+TGG | 0.481330 | 4_3:-34737025 | None:intergenic |
| GTGATAGAAGCTAGAAAGGA+AGG | 0.482180 | 4_3:+34738777 | Msa0639110:CDS |
| AGATTGGAAAATATAGATGA+TGG | 0.489952 | 4_3:+34744167 | Msa0639110:CDS |
| ATTCACAATTGCGGGAATTG+TGG | 0.490506 | 4_3:+34744099 | Msa0639110:CDS |
| GAAAACAATCAAGAAGAAGA+TGG | 0.504536 | 4_3:+34744144 | Msa0639110:CDS |
| CTTGTTGAAGACTTTATCCA+TGG | 0.505504 | 4_3:-34737172 | None:intergenic |
| TTTCCCTATTGCAGATTGAA+AGG | 0.505700 | 4_3:+34739132 | Msa0639110:intron |
| AATATTTGTGCAATCATTGG+AGG | 0.520187 | 4_3:+34743966 | Msa0639110:CDS |
| CTAATGTCCGTGTATACTGT+AGG | 0.520758 | 4_3:-34742912 | None:intergenic |
| GTTGCAGGTCAACTTTAAAG+AGG | 0.521061 | 4_3:+34743914 | Msa0639110:intron |
| GATTGGTTAATCCTCTTGAT+GGG | 0.521240 | 4_3:+34741211 | Msa0639110:CDS |
| AAAATATAGATGATGGGGTC+AGG | 0.521710 | 4_3:+34744174 | Msa0639110:exon |
| TCTACAGCTCGTCTTAATCA+TGG | 0.523451 | 4_3:-34744293 | None:intergenic |
| GCTCATGACTTGTACTTGGT+TGG | 0.523846 | 4_3:+34744244 | Msa0639110:three_prime_UTR |
| AGTCATGAGCAGATTCAACT+TGG | 0.523970 | 4_3:-34744231 | None:intergenic |
| TAACGGCGCTCCGTCGGCGA+CGG | 0.525972 | 4_3:-34737095 | None:intergenic |
| TTCTGAACTCTTGAAATGCT+CGG | 0.529904 | 4_3:-34743055 | None:intergenic |
| CTTGAAGTGAATAAAGTGGC+AGG | 0.531002 | 4_3:+34740919 | Msa0639110:CDS |
| AATGCTTTGCAGGATAAAAT+GGG | 0.531280 | 4_3:+34742486 | Msa0639110:intron |
| TCGTGAGGCATATAGGAAGA+AGG | 0.532464 | 4_3:+34740539 | Msa0639110:CDS |
| GATTGGAAAATATAGATGAT+GGG | 0.535185 | 4_3:+34744168 | Msa0639110:exon |
| TAGCTGACTGAAGAAAGCTT+TGG | 0.540463 | 4_3:-34740963 | None:intergenic |
| GGGTCATATCATACTTAGCT+CGG | 0.541362 | 4_3:-34737307 | None:intergenic |
| TACTTAGCTCGGAAATAAAG+AGG | 0.546697 | 4_3:-34737296 | None:intergenic |
| GATTAACCAATCCAGGGTAA+TGG | 0.548392 | 4_3:-34741200 | None:intergenic |
| AGGCATATAGGAAGAAGGGA+TGG | 0.551318 | 4_3:+34740544 | Msa0639110:CDS |
| CCTTACAGAAACATGGTGGC+AGG | 0.551937 | 4_3:+34739156 | Msa0639110:CDS |
| GAGGAAAAGCATGACGGCGG+CGG | 0.554845 | 4_3:-34737277 | None:intergenic |
| CAACAAACTACGCTATTCTC+CGG | 0.555006 | 4_3:+34737069 | Msa0639110:five_prime_UTR |
| AGGCGATAACGGCGCTCCGT+CGG | 0.555381 | 4_3:-34737101 | None:intergenic |
| CATAGGTATATTCACAATTG+CGG | 0.556363 | 4_3:+34744090 | Msa0639110:intron |
| TGGGTCCAAGGAAATGATCA+TGG | 0.561072 | 4_3:+34742505 | Msa0639110:CDS |
| TCTCCGGCCACCGTCGCCGA+CGG | 0.563357 | 4_3:+34737085 | Msa0639110:five_prime_UTR |
| TATAACCGCACTCTCGCCGG+AGG | 0.565571 | 4_3:+34737237 | Msa0639110:CDS |
| CTGCCACCATGTTTCTGTAA+GGG | 0.566564 | 4_3:-34739155 | None:intergenic |
| AAAGAAAATTACCCATCAAG+AGG | 0.569599 | 4_3:-34741222 | None:intergenic |
| TAATGTCCGTGTATACTGTA+GGG | 0.574539 | 4_3:-34742911 | None:intergenic |
| AGTATTGAACATCGAACAGC+AGG | 0.576281 | 4_3:-34738560 | None:intergenic |
| GGAAGGAATTGGCGCACCAA+AGG | 0.576811 | 4_3:+34738794 | Msa0639110:CDS |
| ACTCTTGAAATGCTCGGTCA+CGG | 0.579209 | 4_3:-34743049 | None:intergenic |
| GACGACGGTGACGACACCTC+CGG | 0.579378 | 4_3:-34737253 | None:intergenic |
| TTGGGTATGCATCCAAATTG+CGG | 0.580291 | 4_3:-34737197 | None:intergenic |
| CGTGAGGCATATAGGAAGAA+GGG | 0.582433 | 4_3:+34740540 | Msa0639110:CDS |
| TCATAGAAGAAGAAAACTCC+CGG | 0.587428 | 4_3:-34743093 | None:intergenic |
| GGACATTAGAGCACCGATGT+AGG | 0.589193 | 4_3:-34744210 | None:intergenic |
| CATGACGGCGGCGGAGACGA+CGG | 0.590043 | 4_3:-34737268 | None:intergenic |
| GAGAATAGCGTAGTTTGTTG+AGG | 0.592644 | 4_3:-34737066 | None:intergenic |
| ATCTCTTGAAGTGAATAAAG+TGG | 0.597114 | 4_3:+34740915 | Msa0639110:CDS |
| TGCAGGATAAAATGGGTCCA+AGG | 0.598124 | 4_3:+34742493 | Msa0639110:intron |
| CATTTCAAGAGTTCAGAACT+GGG | 0.599994 | 4_3:+34743060 | Msa0639110:CDS |
| AATACTCAGTTTAGACACAA+TGG | 0.600279 | 4_3:+34738577 | Msa0639110:CDS |
| CTTCACAATTATTACAACAG+TGG | 0.607704 | 4_3:-34740512 | None:intergenic |
| CAAAAGGTAAAGGATGAAGA+AGG | 0.608037 | 4_3:+34740871 | Msa0639110:CDS |
| ATTGGAAAATATAGATGATG+GGG | 0.609053 | 4_3:+34744169 | Msa0639110:exon |
| ATTAGAGCACCGATGTAGGA+AGG | 0.610001 | 4_3:-34744206 | None:intergenic |
| GTAAAGGATGAAGAAGGTGA+AGG | 0.610725 | 4_3:+34740877 | Msa0639110:CDS |
| CAAGAGGATTAACCAATCCA+GGG | 0.627731 | 4_3:-34741206 | None:intergenic |
| CGACACCTCCGGCGAGAGTG+CGG | 0.635707 | 4_3:-34737242 | None:intergenic |
| GGCATATAGGAAGAAGGGAT+GGG | 0.636215 | 4_3:+34740545 | Msa0639110:CDS |
| GAAAGGCCCTTACAGAAACA+TGG | 0.652386 | 4_3:+34739149 | Msa0639110:CDS |
| TCACACTATCCTTCCTACAT+CGG | 0.652495 | 4_3:+34744197 | Msa0639110:three_prime_UTR |
| TTCACAAGCACCGAATTGTG+AGG | 0.657282 | 4_3:-34737134 | None:intergenic |
| GGTGGTCCCTACAGTATACA+CGG | 0.683793 | 4_3:+34742905 | Msa0639110:intron |
| AATAAAGAGGAAAAGCATGA+CGG | 0.687611 | 4_3:-34737283 | None:intergenic |
| TAATTGTGAAGAAGTTCGTG+AGG | 0.690238 | 4_3:+34740524 | Msa0639110:CDS |
| CAATGGATATTAGTGGCGAG+CGG | 0.694408 | 4_3:+34738594 | Msa0639110:CDS |
| AAAGAGGAAAAGCATGACGG+CGG | 0.739902 | 4_3:-34737280 | None:intergenic |
| AGGCCCTTACAGAAACATGG+TGG | 0.756459 | 4_3:+34739152 | Msa0639110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAAAAAAAAATAAAA+AGG | - | chr4_3:34737342-34737361 | None:intergenic | 0.0% |
| !! | AAAAGAAATTATAAAACAAT+TGG | - | chr4_3:34740456-34740475 | None:intergenic | 10.0% |
| !!! | AAGTTAAAATCTAAATATTT+TGG | + | chr4_3:34744404-34744423 | Msa0639110:three_prime_UTR | 10.0% |
| !!! | AAAAATCTTCATTAACTTTT+GGG | - | chr4_3:34737218-34737237 | None:intergenic | 15.0% |
| !!! | TAAAAATCTTCATTAACTTT+TGG | - | chr4_3:34737219-34737238 | None:intergenic | 15.0% |
| !! | TCATTAATTTCTTATAAACA+TGG | - | chr4_3:34737674-34737693 | None:intergenic | 15.0% |
| !! | ATCACAAGTTAAATAATTAT+TGG | + | chr4_3:34737985-34738004 | Msa0639110:intron | 15.0% |
| !! | GTGTTTATTATGTTTAAATT+TGG | + | chr4_3:34739239-34739258 | Msa0639110:intron | 15.0% |
| !! | TTTATTTATCAATATGTATG+CGG | + | chr4_3:34740741-34740760 | Msa0639110:intron | 15.0% |
| !!! | ATTTAAGTTTTACTGATAAA+GGG | - | chr4_3:34741334-34741353 | None:intergenic | 15.0% |
| !!! | TATTTAAGTTTTACTGATAA+AGG | - | chr4_3:34741335-34741354 | None:intergenic | 15.0% |
| !! | AAATATGTTAATAGTTATAG+TGG | - | chr4_3:34741385-34741404 | None:intergenic | 15.0% |
| !! | ATTGCAAAATTTATATAGAA+AGG | + | chr4_3:34741699-34741718 | Msa0639110:intron | 15.0% |
| !! | TTGCAAAATTTATATAGAAA+GGG | + | chr4_3:34741700-34741719 | Msa0639110:intron | 15.0% |
| !!! | TTATCTTTTCTTTACTTTTT+TGG | + | chr4_3:34742833-34742852 | Msa0639110:intron | 15.0% |
| !!! | TTAAAAATTGTTATTAGAGA+TGG | + | chr4_3:34743478-34743497 | Msa0639110:intron | 15.0% |
| !!! | TAAAAATTGTTATTAGAGAT+GGG | + | chr4_3:34743479-34743498 | Msa0639110:intron | 15.0% |
| !!! | GATTAATGAATTGTATTTTT+TGG | + | chr4_3:34744323-34744342 | Msa0639110:three_prime_UTR | 15.0% |
| !! | GAAAATTTAATAAACAAGAT+AGG | - | chr4_3:34744437-34744456 | None:intergenic | 15.0% |
| !!! | TTAATGACTCTTTTATTCAA+AGG | - | chr4_3:34736987-34737006 | None:intergenic | 20.0% |
| !! | AAATAAAAAGGATGAAAGAA+GGG | - | chr4_3:34737330-34737349 | None:intergenic | 20.0% |
| !! | AAAATAAAAAGGATGAAAGA+AGG | - | chr4_3:34737331-34737350 | None:intergenic | 20.0% |
| !!! | TGAATGATTTTTTTGTAACA+TGG | + | chr4_3:34737370-34737389 | Msa0639110:intron | 20.0% |
| !! | TAAAGTTTGGAAATTTAGAA+AGG | + | chr4_3:34737397-34737416 | Msa0639110:intron | 20.0% |
| !! | AAAGTTTGGAAATTTAGAAA+GGG | + | chr4_3:34737398-34737417 | Msa0639110:intron | 20.0% |
| !! | GTTTCAATTTGTGTATATTT+AGG | + | chr4_3:34737467-34737486 | Msa0639110:intron | 20.0% |
| !!! | AATTTGTGTATATTTAGGAT+GGG | + | chr4_3:34737472-34737491 | Msa0639110:intron | 20.0% |
| !!! | TTATCATTTAAGATCACTTT+AGG | + | chr4_3:34737517-34737536 | Msa0639110:intron | 20.0% |
| !!! | TATCATTTAAGATCACTTTA+GGG | + | chr4_3:34737518-34737537 | Msa0639110:intron | 20.0% |
| !!! | ATGTTTTATGATGTAATTCA+TGG | + | chr4_3:34737734-34737753 | Msa0639110:intron | 20.0% |
| !!! | AATTTTCTTATTCATAGGAT+GGG | + | chr4_3:34738093-34738112 | Msa0639110:intron | 20.0% |
| !! | ACAAACTTCAATAACTTTAT+CGG | + | chr4_3:34738171-34738190 | Msa0639110:intron | 20.0% |
| !!! | TATATTTCAAGTCTAATCTA+TGG | + | chr4_3:34738339-34738358 | Msa0639110:intron | 20.0% |
| !! | TTCCCATAAATTTATTAGTT+TGG | + | chr4_3:34738397-34738416 | Msa0639110:intron | 20.0% |
| !! | CACCAAACTAATAAATTTAT+GGG | - | chr4_3:34738402-34738421 | None:intergenic | 20.0% |
| !! | TCACCAAACTAATAAATTTA+TGG | - | chr4_3:34738403-34738422 | None:intergenic | 20.0% |
| !! | TGAAGTTAGATATACAATTA+CGG | - | chr4_3:34738488-34738507 | None:intergenic | 20.0% |
| !! | TGGTAAAAAAATAGGAAAAA+TGG | - | chr4_3:34738893-34738912 | None:intergenic | 20.0% |
| !! | TACAAACATGGTAAAAAAAT+AGG | - | chr4_3:34738901-34738920 | None:intergenic | 20.0% |
| !!! | ATAATTAGGTTTTCTAATAC+CGG | + | chr4_3:34738936-34738955 | Msa0639110:intron | 20.0% |
| !! | GAGAAATAAGTGTATTAATT+TGG | + | chr4_3:34739621-34739640 | Msa0639110:intron | 20.0% |
| !! | ACTGAAAATGAATATATCAA+CGG | - | chr4_3:34739932-34739951 | None:intergenic | 20.0% |
| !!! | ATATTTTCTTTGGTTGTATT+GGG | - | chr4_3:34740024-34740043 | None:intergenic | 20.0% |
| !!! | AATATTTTCTTTGGTTGTAT+TGG | - | chr4_3:34740025-34740044 | None:intergenic | 20.0% |
| !!! | GTTTAAAATTATTTGGTGAA+AGG | - | chr4_3:34740699-34740718 | None:intergenic | 20.0% |
| !!! | GATAGGAGTTTAAAATTATT+TGG | - | chr4_3:34740706-34740725 | None:intergenic | 20.0% |
| !!! | AATTTTCTTTTTTCTTCCTA+AGG | + | chr4_3:34741235-34741254 | Msa0639110:intron | 20.0% |
| !! | AACAAATTCCCTTATATTTA+AGG | + | chr4_3:34741355-34741374 | Msa0639110:intron | 20.0% |
| !! | AATGATTCAAATGAATACTT+TGG | + | chr4_3:34741483-34741502 | Msa0639110:intron | 20.0% |
| !! | TACAAACCTTTATGAAATAT+TGG | - | chr4_3:34742537-34742556 | None:intergenic | 20.0% |
| !! | AATATCATTATCAAGCAATT+GGG | - | chr4_3:34742619-34742638 | None:intergenic | 20.0% |
| !! | TAATATCATTATCAAGCAAT+TGG | - | chr4_3:34742620-34742639 | None:intergenic | 20.0% |
| !! | AATGAAATAATTTAACATGC+AGG | - | chr4_3:34743405-34743424 | None:intergenic | 20.0% |
| !!! | AAAAATTGTTATTAGAGATG+GGG | + | chr4_3:34743480-34743499 | Msa0639110:intron | 20.0% |
| !!! | GATTTAATTTGTAGAAAAAG+AGG | + | chr4_3:34743776-34743795 | Msa0639110:intron | 20.0% |
| !! | TACATTCATTTCTATACATT+TGG | + | chr4_3:34744012-34744031 | Msa0639110:intron | 20.0% |
| !! | ACATTCATTTCTATACATTT+GGG | + | chr4_3:34744013-34744032 | Msa0639110:intron | 20.0% |
| !! | TTCTTCAAAATACATGAAAA+TGG | - | chr4_3:34744372-34744391 | None:intergenic | 20.0% |
| ! | AATTGTGAGGAATATGATAA+AGG | - | chr4_3:34737124-34737143 | None:intergenic | 25.0% |
| ! | TTATCATATTCCTCACAATT+CGG | + | chr4_3:34737124-34737143 | Msa0639110:five_prime_UTR | 25.0% |
| !!! | TGATTTTTTTGTAACATGGT+TGG | + | chr4_3:34737374-34737393 | Msa0639110:intron | 25.0% |
| ! | CAATTTGTGTATATTTAGGA+TGG | + | chr4_3:34737471-34737490 | Msa0639110:intron | 25.0% |
| !! | ATCATTTAAGATCACTTTAG+GGG | + | chr4_3:34737519-34737538 | Msa0639110:intron | 25.0% |
| ! | CAAGTTAAATAACATTTGCA+AGG | - | chr4_3:34737825-34737844 | None:intergenic | 25.0% |
| ! | TGATTAATGTTATGCATGTT+TGG | + | chr4_3:34737845-34737864 | Msa0639110:intron | 25.0% |
| !! | TCTGCAATTTTCTTATTCAT+AGG | + | chr4_3:34738088-34738107 | Msa0639110:intron | 25.0% |
| !! | CAATTTTCTTATTCATAGGA+TGG | + | chr4_3:34738092-34738111 | Msa0639110:intron | 25.0% |
| ! | GATGATTACATTGATGTTTA+AGG | - | chr4_3:34738274-34738293 | None:intergenic | 25.0% |
| !!! | AGGAAAAAACTTTGAGATAA+TGG | - | chr4_3:34738454-34738473 | None:intergenic | 25.0% |
| ! | AATTGATACAATGAAATCTG+AGG | - | chr4_3:34738641-34738660 | None:intergenic | 25.0% |
| !! | AATTGCATGTACATACTTTT+AGG | + | chr4_3:34738663-34738682 | Msa0639110:intron | 25.0% |
| ! | AAACAAAGAATTGATGCTAA+TGG | + | chr4_3:34738750-34738769 | Msa0639110:CDS | 25.0% |
| ! | TGAGTATTTAAACTAACCTT+TGG | - | chr4_3:34738813-34738832 | None:intergenic | 25.0% |
| ! | AAAAAAGAGTAGTACAAACA+TGG | - | chr4_3:34738913-34738932 | None:intergenic | 25.0% |
| !!! | TACTCTTTTTTGCCATAATT+AGG | + | chr4_3:34738922-34738941 | Msa0639110:intron | 25.0% |
| ! | GGTATTAGAAAACCTAATTA+TGG | - | chr4_3:34738937-34738956 | None:intergenic | 25.0% |
| !! | TAATTAGGTTTTCTAATACC+GGG | + | chr4_3:34738937-34738956 | Msa0639110:intron | 25.0% |
| ! | GTATAAATGAATATAGACCT+TGG | - | chr4_3:34739083-34739102 | None:intergenic | 25.0% |
| ! | GAACATGATGAAAAATATTG+TGG | + | chr4_3:34739182-34739201 | Msa0639110:CDS | 25.0% |
| !!! | AAATATTGTGGTTCTTGTTT+TGG | + | chr4_3:34739194-34739213 | Msa0639110:CDS | 25.0% |
| ! | ATGGAGTTATTCAACTAATT+TGG | + | chr4_3:34739677-34739696 | Msa0639110:intron | 25.0% |
| ! | CAAATAGATTATAGCAAGAA+CGG | + | chr4_3:34739979-34739998 | Msa0639110:intron | 25.0% |
| !!! | ATTTTTCAACAAACCAAACA+CGG | - | chr4_3:34740049-34740068 | None:intergenic | 25.0% |
| ! | AGATAATTTCAGTGTTTAAG+AGG | - | chr4_3:34740096-34740115 | None:intergenic | 25.0% |
| ! | AATTATCTTCATTGCTACAA+TGG | + | chr4_3:34740108-34740127 | Msa0639110:intron | 25.0% |
| ! | ATATGCACATTTAACAAGAT+CGG | - | chr4_3:34740161-34740180 | None:intergenic | 25.0% |
| ! | CATATATTGTAGACAAAGTT+AGG | + | chr4_3:34740176-34740195 | Msa0639110:intron | 25.0% |
| ! | AATGAGTCATTTATACTGAT+AGG | - | chr4_3:34740723-34740742 | None:intergenic | 25.0% |
| ! | ATAATGTAAGAATGAACAAC+AGG | + | chr4_3:34741025-34741044 | Msa0639110:intron | 25.0% |
| ! | ATTATGTGATTACAAGCAAA+GGG | - | chr4_3:34741116-34741135 | None:intergenic | 25.0% |
| ! | AATTATGTGATTACAAGCAA+AGG | - | chr4_3:34741117-34741136 | None:intergenic | 25.0% |
| !!! | AACTTAATTTGTTGATCTGA+TGG | - | chr4_3:34741173-34741192 | None:intergenic | 25.0% |
| !! | CAGATCAACAAATTAAGTTT+TGG | + | chr4_3:34741174-34741193 | Msa0639110:CDS | 25.0% |
| !! | GTGGTTTTCCTTAAATATAA+GGG | - | chr4_3:34741366-34741385 | None:intergenic | 25.0% |
| !! | AGTGGTTTTCCTTAAATATA+AGG | - | chr4_3:34741367-34741386 | None:intergenic | 25.0% |
| ! | GTCTAAATAAGGTTAAAGAA+TGG | - | chr4_3:34741450-34741469 | None:intergenic | 25.0% |
| ! | TCAACAGATAAGTCTAAATA+AGG | - | chr4_3:34741461-34741480 | None:intergenic | 25.0% |
| ! | TCAAGAATATAAGAGAGAAT+GGG | - | chr4_3:34741590-34741609 | None:intergenic | 25.0% |
| ! | TTCAAGAATATAAGAGAGAA+TGG | - | chr4_3:34741591-34741610 | None:intergenic | 25.0% |
| !!! | ATGGGTTATTGATATTTTGT+CGG | + | chr4_3:34741799-34741818 | Msa0639110:intron | 25.0% |
| ! | TTTGGATAAAATCAATGAGA+AGG | + | chr4_3:34741847-34741866 | Msa0639110:intron | 25.0% |
| ! | TTGGATAAAATCAATGAGAA+GGG | + | chr4_3:34741848-34741867 | Msa0639110:intron | 25.0% |
| ! | TGAAAAAAAGTAGTTAGTAG+AGG | + | chr4_3:34741912-34741931 | Msa0639110:intron | 25.0% |
| ! | TTCAACGTTAGCTAAATATA+AGG | - | chr4_3:34742097-34742116 | None:intergenic | 25.0% |
| ! | ATAGATTCTCATACTATCTA+AGG | + | chr4_3:34742205-34742224 | Msa0639110:intron | 25.0% |
| !!! | TCATACTATCTAAGGTTTTT+GGG | + | chr4_3:34742213-34742232 | Msa0639110:intron | 25.0% |
| ! | CATGTACCAATATTTCATAA+AGG | + | chr4_3:34742528-34742547 | Msa0639110:CDS | 25.0% |
| ! | ATTTCATAAAGGTTTGTACT+TGG | + | chr4_3:34742539-34742558 | Msa0639110:intron | 25.0% |
| ! | AGACATAAACTATTATTCTC+TGG | + | chr4_3:34742715-34742734 | Msa0639110:intron | 25.0% |
| ! | TGATAACATGTTACATTACA+TGG | + | chr4_3:34742800-34742819 | Msa0639110:intron | 25.0% |
| !!! | TACTTTTTTGGCAATATTAC+TGG | + | chr4_3:34742845-34742864 | Msa0639110:intron | 25.0% |
| !!! | ACTTTTTTGGCAATATTACT+GGG | + | chr4_3:34742846-34742865 | Msa0639110:intron | 25.0% |
| !! | ATTTTCTGTATACACTTTGT+AGG | + | chr4_3:34742884-34742903 | Msa0639110:intron | 25.0% |
| ! | TCGTGTTATATATTCAAATC+AGG | + | chr4_3:34742938-34742957 | Msa0639110:CDS | 25.0% |
| !!! | AAAAGTACTCTTACCTTTAT+TGG | - | chr4_3:34743126-34743145 | None:intergenic | 25.0% |
| ! | TGCATCTAAACTGAATAAAA+AGG | + | chr4_3:34743153-34743172 | Msa0639110:intron | 25.0% |
| ! | CAAATTATGTTCACAAAATG+TGG | - | chr4_3:34743331-34743350 | None:intergenic | 25.0% |
| !! | AAAATTGTTATTAGAGATGG+GGG | + | chr4_3:34743481-34743500 | Msa0639110:intron | 25.0% |
| ! | CAGTCAATAATATGTTACAT+TGG | + | chr4_3:34743548-34743567 | Msa0639110:intron | 25.0% |
| ! | AAGGTATAAAACAAACTTCA+AGG | - | chr4_3:34743589-34743608 | None:intergenic | 25.0% |
| ! | TTGGTCAAGAAATGTAAAAA+TGG | - | chr4_3:34743948-34743967 | None:intergenic | 25.0% |
| ! | GTGGATTCATCAATATATTA+TGG | + | chr4_3:34744118-34744137 | Msa0639110:CDS | 25.0% |
| ! | AGATTGGAAAATATAGATGA+TGG | + | chr4_3:34744167-34744186 | Msa0639110:CDS | 25.0% |
| ! | GATTGGAAAATATAGATGAT+GGG | + | chr4_3:34744168-34744187 | Msa0639110:exon | 25.0% |
| ! | ATTGGAAAATATAGATGATG+GGG | + | chr4_3:34744169-34744188 | Msa0639110:exon | 25.0% |
| AAGAATGAAGAAAGACTGAA+TGG | - | chr4_3:34737028-34737047 | None:intergenic | 30.0% | |
| TGTTGAGGAAATTGATGAAT+TGG | - | chr4_3:34737054-34737073 | None:intergenic | 30.0% | |
| GAATATGATAAAGGCGATAA+CGG | - | chr4_3:34737115-34737134 | None:intergenic | 30.0% | |
| ! | AATAAAGAGGAAAAGCATGA+CGG | - | chr4_3:34737286-34737305 | None:intergenic | 30.0% |
| !!! | ATTTCATGGGTTTTGATTTC+TGG | + | chr4_3:34737429-34737448 | Msa0639110:intron | 30.0% |
| !!! | TTTCATGGGTTTTGATTTCT+GGG | + | chr4_3:34737430-34737449 | Msa0639110:intron | 30.0% |
| ! | TCATTTAAGATCACTTTAGG+GGG | + | chr4_3:34737520-34737539 | Msa0639110:intron | 30.0% |
| !! | TAGCTGAATTTGAAGTGTTT+TGG | + | chr4_3:34737576-34737595 | Msa0639110:intron | 30.0% |
| !! | AGCTGAATTTGAAGTGTTTT+GGG | + | chr4_3:34737577-34737596 | Msa0639110:intron | 30.0% |
| CTAACATGATTGAAATAGAG+AGG | - | chr4_3:34737628-34737647 | None:intergenic | 30.0% | |
| ATGTAATTCATGGATAGTCA+AGG | + | chr4_3:34737744-34737763 | Msa0639110:intron | 30.0% | |
| TGTAATTCATGGATAGTCAA+GGG | + | chr4_3:34737745-34737764 | Msa0639110:intron | 30.0% | |
| AATGTTATGCATGTTTGGAT+TGG | + | chr4_3:34737850-34737869 | Msa0639110:intron | 30.0% | |
| !! | ATTTAACTTGTGATCATGCT+TGG | - | chr4_3:34737979-34737998 | None:intergenic | 30.0% |
| TAAATAATTATTGGCGCAAG+TGG | + | chr4_3:34737994-34738013 | Msa0639110:intron | 30.0% | |
| !!! | ATCGGTTTTATTTTGATTGC+AGG | + | chr4_3:34738189-34738208 | Msa0639110:intron | 30.0% |
| !! | ATAATGGATCTTACACAGTT+TGG | - | chr4_3:34738438-34738457 | None:intergenic | 30.0% |
| CAATTACGGAATTGTTTAGA+AGG | - | chr4_3:34738474-34738493 | None:intergenic | 30.0% | |
| AATACTCAGTTTAGACACAA+TGG | + | chr4_3:34738577-34738596 | Msa0639110:CDS | 30.0% | |
| TTAGACACAATGGATATTAG+TGG | + | chr4_3:34738587-34738606 | Msa0639110:CDS | 30.0% | |
| ACTAGAGAGTTTATAAAGAG+TGG | - | chr4_3:34739004-34739023 | None:intergenic | 30.0% | |
| TCTTTATAAACTCTCTAGTC+AGG | + | chr4_3:34739005-34739024 | Msa0639110:intron | 30.0% | |
| GCCTTATCTTTAACCTATAT+GGG | + | chr4_3:34739027-34739046 | Msa0639110:intron | 30.0% | |
| TCCCATATAGGTTAAAGATA+AGG | - | chr4_3:34739031-34739050 | None:intergenic | 30.0% | |
| GGTAAGAAATTCTTAGTCAA+AGG | + | chr4_3:34739341-34739360 | Msa0639110:intron | 30.0% | |
| ACATGTCAATAAAAAAACCC+CGG | - | chr4_3:34739387-34739406 | None:intergenic | 30.0% | |
| TTTAACATCTTTCTTCAACG+AGG | - | chr4_3:34739435-34739454 | None:intergenic | 30.0% | |
| ATTCCATAGGTGAAAGAATT+TGG | - | chr4_3:34739547-34739566 | None:intergenic | 30.0% | |
| AACTCATGAAAGAATTCCAT+AGG | - | chr4_3:34739560-34739579 | None:intergenic | 30.0% | |
| TTATTCGTGAGTGGTAATAA+TGG | - | chr4_3:34739658-34739677 | None:intergenic | 30.0% | |
| TTATTACCACTCACGAATAA+TGG | + | chr4_3:34739658-34739677 | Msa0639110:intron | 30.0% | |
| ! | AGGGTTTAAAATTGTAACCA+CGG | - | chr4_3:34739804-34739823 | None:intergenic | 30.0% |
| ! | TCTTTTGCAAAAGAAAACCA+GGG | - | chr4_3:34739823-34739842 | None:intergenic | 30.0% |
| ! | ATCTTTTGCAAAAGAAAACC+AGG | - | chr4_3:34739824-34739843 | None:intergenic | 30.0% |
| AAAATGAATATATCAACGGC+AGG | - | chr4_3:34739928-34739947 | None:intergenic | 30.0% | |
| ! | AAACACGGGAATATTTTCTT+TGG | - | chr4_3:34740034-34740053 | None:intergenic | 30.0% |
| AAAGAAAATATTCCCGTGTT+TGG | + | chr4_3:34740033-34740052 | Msa0639110:intron | 30.0% | |
| !! | TTTTTCAACAAACCAAACAC+GGG | - | chr4_3:34740048-34740067 | None:intergenic | 30.0% |
| AATACTGATGCTAGAAAGTT+TGG | + | chr4_3:34740232-34740251 | Msa0639110:intron | 30.0% | |
| TTGTGTGATTTGAGAATCTA+TGG | + | chr4_3:34740280-34740299 | Msa0639110:intron | 30.0% | |
| TTTGTACACTTTCAATTCAG+TGG | + | chr4_3:34740418-34740437 | Msa0639110:intron | 30.0% | |
| CTTCACAATTATTACAACAG+TGG | - | chr4_3:34740515-34740534 | None:intergenic | 30.0% | |
| AAATATGGATTTGATCGATC+AGG | + | chr4_3:34740575-34740594 | Msa0639110:CDS | 30.0% | |
| TAAAAGCAAAACCAAATCGT+TGG | - | chr4_3:34740829-34740848 | None:intergenic | 30.0% | |
| ATCTCTTGAAGTGAATAAAG+TGG | + | chr4_3:34740915-34740934 | Msa0639110:CDS | 30.0% | |
| TTATGTGATTACAAGCAAAG+GGG | - | chr4_3:34741115-34741134 | None:intergenic | 30.0% | |
| !! | CATAATTGATTTTCAACGCT+TGG | + | chr4_3:34741130-34741149 | Msa0639110:intron | 30.0% |
| AAAGAAAATTACCCATCAAG+AGG | - | chr4_3:34741225-34741244 | None:intergenic | 30.0% | |
| !! | ATAAACAATAAAGGCACCTT+AGG | - | chr4_3:34741254-34741273 | None:intergenic | 30.0% |
| ! | TAAGGTGCCTTTATTGTTTA+TGG | + | chr4_3:34741253-34741272 | Msa0639110:intron | 30.0% |
| CTCGTAACCATAAACAATAA+AGG | - | chr4_3:34741263-34741282 | None:intergenic | 30.0% | |
| GGTTACGAGATTCATAAATT+TGG | + | chr4_3:34741274-34741293 | Msa0639110:intron | 30.0% | |
| !! | AAGTTTTGTAGCTGAGTTAA+AGG | - | chr4_3:34741551-34741570 | None:intergenic | 30.0% |
| AATATAAGAGAGAATGGGTA+GGG | - | chr4_3:34741585-34741604 | None:intergenic | 30.0% | |
| TTTATATAGAAAGGGAAGAC+AGG | + | chr4_3:34741708-34741727 | Msa0639110:intron | 30.0% | |
| TTATATAGAAAGGGAAGACA+GGG | + | chr4_3:34741709-34741728 | Msa0639110:intron | 30.0% | |
| AGACAGGGTTAATTTCATTA+CGG | + | chr4_3:34741724-34741743 | Msa0639110:intron | 30.0% | |
| ACCTATACTTTATAAGCTCT+AGG | + | chr4_3:34742071-34742090 | Msa0639110:intron | 30.0% | |
| TATTTAGCTAACGTTGAACT+TGG | + | chr4_3:34742099-34742118 | Msa0639110:intron | 30.0% | |
| ATTTAGCTAACGTTGAACTT+GGG | + | chr4_3:34742100-34742119 | Msa0639110:intron | 30.0% | |
| !! | CTCATACTATCTAAGGTTTT+TGG | + | chr4_3:34742212-34742231 | Msa0639110:intron | 30.0% |
| ! | TTTCACATTGGCTAGATTTA+AGG | - | chr4_3:34742306-34742325 | None:intergenic | 30.0% |
| GAAAAACACAAGTTTCACAT+TGG | - | chr4_3:34742318-34742337 | None:intergenic | 30.0% | |
| AAGAAAGACTTCAAATGGTA+GGG | - | chr4_3:34742456-34742475 | None:intergenic | 30.0% | |
| AAGAGAAGAAAGACTTCAAA+TGG | - | chr4_3:34742461-34742480 | None:intergenic | 30.0% | |
| !! | ATTTTATCCTGCAAAGCATT+AGG | - | chr4_3:34742486-34742505 | None:intergenic | 30.0% |
| TAATGCTTTGCAGGATAAAA+TGG | + | chr4_3:34742485-34742504 | Msa0639110:intron | 30.0% | |
| AATGCTTTGCAGGATAAAAT+GGG | + | chr4_3:34742486-34742505 | Msa0639110:intron | 30.0% | |
| AATTGGGTAATGATAATAGC+AGG | - | chr4_3:34742603-34742622 | None:intergenic | 30.0% | |
| CTATGACATATCTCCAATAA+AGG | + | chr4_3:34743110-34743129 | Msa0639110:CDS | 30.0% | |
| ACTGAGAAGGTAATATCTTA+TGG | - | chr4_3:34743277-34743296 | None:intergenic | 30.0% | |
| ! | GTGAACATAATTTGCATGAT+TGG | + | chr4_3:34743337-34743356 | Msa0639110:intron | 30.0% |
| TTCATTCATCCTATGACATT+TGG | + | chr4_3:34743424-34743443 | Msa0639110:intron | 30.0% | |
| TCATTCATCCTATGACATTT+GGG | + | chr4_3:34743425-34743444 | Msa0639110:intron | 30.0% | |
| AGGAAAGGAAAATTCAATCA+AGG | + | chr4_3:34743506-34743525 | Msa0639110:intron | 30.0% | |
| GTATAAAACAAACTTCAAGG+TGG | - | chr4_3:34743586-34743605 | None:intergenic | 30.0% | |
| AGTCATGGCAGTTATAATTA+AGG | - | chr4_3:34743608-34743627 | None:intergenic | 30.0% | |
| ACCAATATTTGTGCAATCAT+TGG | + | chr4_3:34743963-34743982 | Msa0639110:CDS | 30.0% | |
| TCCAATGATTGCACAAATAT+TGG | - | chr4_3:34743967-34743986 | None:intergenic | 30.0% | |
| AATATTTGTGCAATCATTGG+AGG | + | chr4_3:34743966-34743985 | Msa0639110:CDS | 30.0% | |
| CTCATGCAACTGATTAAAAA+CGG | + | chr4_3:34744052-34744071 | Msa0639110:intron | 30.0% | |
| CATAGGTATATTCACAATTG+CGG | + | chr4_3:34744090-34744109 | Msa0639110:intron | 30.0% | |
| ATAGGTATATTCACAATTGC+GGG | + | chr4_3:34744091-34744110 | Msa0639110:intron | 30.0% | |
| GAAAACAATCAAGAAGAAGA+TGG | + | chr4_3:34744144-34744163 | Msa0639110:CDS | 30.0% | |
| ! | AAGCTTTTGGTAAACAACCA+TGG | + | chr4_3:34737155-34737174 | Msa0639110:exon | 35.0% |
| CTTGTTGAAGACTTTATCCA+TGG | - | chr4_3:34737175-34737194 | None:intergenic | 35.0% | |
| TACTTAGCTCGGAAATAAAG+AGG | - | chr4_3:34737299-34737318 | None:intergenic | 35.0% | |
| !! | GTAACATGGTTGGTAAAGTT+TGG | + | chr4_3:34737384-34737403 | Msa0639110:intron | 35.0% |
| GAAATTTAGAAAGGGTAGCT+TGG | + | chr4_3:34737406-34737425 | Msa0639110:intron | 35.0% | |
| GTTAGAAAATTGACGCTCTT+TGG | + | chr4_3:34737643-34737662 | Msa0639110:intron | 35.0% | |
| ATAGTCAAGGGATTTCATCA+AGG | + | chr4_3:34737757-34737776 | Msa0639110:intron | 35.0% | |
| GGTTGAGTTTCTCAATATCA+CGG | - | chr4_3:34737950-34737969 | None:intergenic | 35.0% | |
| ! | TTCATTTAAGATCACTCTCG+CGG | - | chr4_3:34738149-34738168 | None:intergenic | 35.0% |
| ! | TGTTACAGAGAGTAAGCTTT+TGG | + | chr4_3:34738227-34738246 | Msa0639110:CDS | 35.0% |
| TTCAAGTCTAATCTATGGTC+TGG | + | chr4_3:34738344-34738363 | Msa0639110:intron | 35.0% | |
| TCAAGTCTAATCTATGGTCT+GGG | + | chr4_3:34738345-34738364 | Msa0639110:intron | 35.0% | |
| TCAAACTGCATTTCAAAGGA+GGG | - | chr4_3:34738530-34738549 | None:intergenic | 35.0% | |
| ATCAAACTGCATTTCAAAGG+AGG | - | chr4_3:34738531-34738550 | None:intergenic | 35.0% | |
| GACATCAAACTGCATTTCAA+AGG | - | chr4_3:34738534-34738553 | None:intergenic | 35.0% | |
| CAAAGTGATAGAAGCTAGAA+AGG | + | chr4_3:34738773-34738792 | Msa0639110:CDS | 35.0% | |
| ! | GGCCTTATCTTTAACCTATA+TGG | + | chr4_3:34739026-34739045 | Msa0639110:intron | 35.0% |
| TCTTTAACCTATATGGGACT+TGG | + | chr4_3:34739033-34739052 | Msa0639110:intron | 35.0% | |
| !! | GAATATAGACCTTGGTCTTT+TGG | - | chr4_3:34739075-34739094 | None:intergenic | 35.0% |
| CTGCAATAGGGAAAATATAC+AGG | - | chr4_3:34739126-34739145 | None:intergenic | 35.0% | |
| TTTCCCTATTGCAGATTGAA+AGG | + | chr4_3:34739132-34739151 | Msa0639110:intron | 35.0% | |
| ! | GAGTATTGCTTAGAATTGCA+AGG | + | chr4_3:34739300-34739319 | Msa0639110:intron | 35.0% |
| !!! | GGGGTTTTTTTATTGACATG+TGG | + | chr4_3:34739386-34739405 | Msa0639110:intron | 35.0% |
| ! | GAATGTGTGTTAATCGATTC+TGG | + | chr4_3:34739492-34739511 | Msa0639110:intron | 35.0% |
| !! | TGTTAATCGATTCTGGAGTT+TGG | + | chr4_3:34739499-34739518 | Msa0639110:intron | 35.0% |
| ATAGGTGAAAGAATTTGGAG+AGG | - | chr4_3:34739542-34739561 | None:intergenic | 35.0% | |
| TCTCCAAATTCTTTCACCTA+TGG | + | chr4_3:34739541-34739560 | Msa0639110:intron | 35.0% | |
| ATAACTCCATTATTCGTGAG+TGG | - | chr4_3:34739667-34739686 | None:intergenic | 35.0% | |
| ! | GTGGTTACAATTTTAAACCC+TGG | + | chr4_3:34739803-34739822 | Msa0639110:intron | 35.0% |
| GCAAAAGATGTTGACATCAA+CGG | + | chr4_3:34739835-34739854 | Msa0639110:intron | 35.0% | |
| CAAAAGATGTTGACATCAAC+GGG | + | chr4_3:34739836-34739855 | Msa0639110:intron | 35.0% | |
| TAATTGTGAAGAAGTTCGTG+AGG | + | chr4_3:34740524-34740543 | Msa0639110:CDS | 35.0% | |
| TCAATGAAGCAAAGCTAGTA+TGG | - | chr4_3:34740607-34740626 | None:intergenic | 35.0% | |
| ! | GTTGGTAAGCTAAGAATGTT+AGG | - | chr4_3:34740811-34740830 | None:intergenic | 35.0% |
| TTCTTAGCTTACCAACGATT+TGG | + | chr4_3:34740815-34740834 | Msa0639110:intron | 35.0% | |
| !! | TTGCTTTTAGTGTCAAAGAG+AGG | + | chr4_3:34740840-34740859 | Msa0639110:intron | 35.0% |
| ! | TGCTTTTAGTGTCAAAGAGA+GGG | + | chr4_3:34740841-34740860 | Msa0639110:intron | 35.0% |
| CAAAAGGTAAAGGATGAAGA+AGG | + | chr4_3:34740871-34740890 | Msa0639110:CDS | 35.0% | |
| ! | GGAAATTTTCATTTTGCGAC+TGG | + | chr4_3:34740940-34740959 | Msa0639110:CDS | 35.0% |
| ! | GATTGGTTAATCCTCTTGAT+GGG | + | chr4_3:34741211-34741230 | Msa0639110:CDS | 35.0% |
| ! | TTGATAACTTAGCCATTCCT+TGG | + | chr4_3:34741403-34741422 | Msa0639110:intron | 35.0% |
| TAGCTGAACCTTCATTCAAA+TGG | + | chr4_3:34741508-34741527 | Msa0639110:intron | 35.0% | |
| TGAACCTTCATTCAAATGGT+TGG | + | chr4_3:34741512-34741531 | Msa0639110:intron | 35.0% | |
| GAACCTTCATTCAAATGGTT+GGG | + | chr4_3:34741513-34741532 | Msa0639110:intron | 35.0% | |
| !!! | GCTGAGTTAAAGGTTAGTTT+TGG | - | chr4_3:34741541-34741560 | None:intergenic | 35.0% |
| GAATATAAGAGAGAATGGGT+AGG | - | chr4_3:34741586-34741605 | None:intergenic | 35.0% | |
| GCCTAGAGCTTATAAAGTAT+AGG | - | chr4_3:34742075-34742094 | None:intergenic | 35.0% | |
| GTACCAAACTCAATAGTGTT+AGG | - | chr4_3:34742149-34742168 | None:intergenic | 35.0% | |
| !! | TTGTGAGTTGATGATTGTCT+AGG | + | chr4_3:34742261-34742280 | Msa0639110:intron | 35.0% |
| ! | TAGGCTTTATAAGCTCTATC+AGG | + | chr4_3:34742280-34742299 | Msa0639110:intron | 35.0% |
| CTTTATGACTGCAATCATTG+CGG | + | chr4_3:34742346-34742365 | Msa0639110:intron | 35.0% | |
| GAAGAAAGACTTCAAATGGT+AGG | - | chr4_3:34742457-34742476 | None:intergenic | 35.0% | |
| TTCTGTATACACTTTGTAGG+TGG | + | chr4_3:34742887-34742906 | Msa0639110:intron | 35.0% | |
| TAATGTCCGTGTATACTGTA+GGG | - | chr4_3:34742914-34742933 | None:intergenic | 35.0% | |
| TTCTGAACTCTTGAAATGCT+CGG | - | chr4_3:34743058-34743077 | None:intergenic | 35.0% | |
| CATTTCAAGAGTTCAGAACT+GGG | + | chr4_3:34743060-34743079 | Msa0639110:CDS | 35.0% | |
| TCATAGAAGAAGAAAACTCC+CGG | - | chr4_3:34743096-34743115 | None:intergenic | 35.0% | |
| CACATACTAAGCGTTATCAA+GGG | - | chr4_3:34743200-34743219 | None:intergenic | 35.0% | |
| ACACATACTAAGCGTTATCA+AGG | - | chr4_3:34743201-34743220 | None:intergenic | 35.0% | |
| TTACCTTCTCAGTATTTCCT+TGG | + | chr4_3:34743284-34743303 | Msa0639110:intron | 35.0% | |
| ACCAATGTGTTTAATGTTGC+AGG | + | chr4_3:34743899-34743918 | Msa0639110:intron | 35.0% | |
| ACCTGCAACATTAAACACAT+TGG | - | chr4_3:34743903-34743922 | None:intergenic | 35.0% | |
| ! | CGTTTTTAATCAGTTGCATG+AGG | - | chr4_3:34744054-34744073 | None:intergenic | 35.0% |
| GGATTTCAATTTCTCTGCAT+AGG | + | chr4_3:34744073-34744092 | Msa0639110:intron | 35.0% | |
| ATCAAGAAGAAGATGGAGAT+TGG | + | chr4_3:34744151-34744170 | Msa0639110:CDS | 35.0% | |
| !! | AAAATATAGATGATGGGGTC+AGG | + | chr4_3:34744174-34744193 | Msa0639110:exon | 35.0% |
| !! | GAGAATAGCGTAGTTTGTTG+AGG | - | chr4_3:34737069-34737088 | None:intergenic | 40.0% |
| CAACAAACTACGCTATTCTC+CGG | + | chr4_3:34737069-34737088 | Msa0639110:five_prime_UTR | 40.0% | |
| TTGGGTATGCATCCAAATTG+CGG | - | chr4_3:34737200-34737219 | None:intergenic | 40.0% | |
| GGGTCATATCATACTTAGCT+CGG | - | chr4_3:34737310-34737329 | None:intergenic | 40.0% | |
| AAAGGGTAGCTTGGATTTCA+TGG | + | chr4_3:34737415-34737434 | Msa0639110:intron | 40.0% | |
| AAGGGTAGCTTGGATTTCAT+GGG | + | chr4_3:34737416-34737435 | Msa0639110:intron | 40.0% | |
| GATCATTATTGCTGTGGCTA+TGG | + | chr4_3:34737494-34737513 | Msa0639110:intron | 40.0% | |
| !! | AAGATCACTTTAGGGGGTTT+TGG | + | chr4_3:34737526-34737545 | Msa0639110:intron | 40.0% |
| CAAGGGATTTCATCAAGGAT+AGG | + | chr4_3:34737762-34737781 | Msa0639110:intron | 40.0% | |
| ! | GTTATGCATGTTTGGATTGG+CGG | + | chr4_3:34737853-34737872 | Msa0639110:intron | 40.0% |
| TGTAGCATTTGCCAAAACTG+GGG | - | chr4_3:34737897-34737916 | None:intergenic | 40.0% | |
| GTGTAGCATTTGCCAAAACT+GGG | - | chr4_3:34737898-34737917 | None:intergenic | 40.0% | |
| AGTGTAGCATTTGCCAAAAC+TGG | - | chr4_3:34737899-34737918 | None:intergenic | 40.0% | |
| TGGCAAATGCTACACTTTGT+AGG | + | chr4_3:34737903-34737922 | Msa0639110:intron | 40.0% | |
| TGTGATCATGCTTGGATTGA+CGG | - | chr4_3:34737971-34737990 | None:intergenic | 40.0% | |
| ATACGCTCAAGTGGGTAAAA+GGG | - | chr4_3:34738065-34738084 | None:intergenic | 40.0% | |
| AATACGCTCAAGTGGGTAAA+AGG | - | chr4_3:34738066-34738085 | None:intergenic | 40.0% | |
| GCAGAAAAATACGCTCAAGT+GGG | - | chr4_3:34738073-34738092 | None:intergenic | 40.0% | |
| TGCAGAAAAATACGCTCAAG+TGG | - | chr4_3:34738074-34738093 | None:intergenic | 40.0% | |
| GATCATTATTGCTGTGGCTT+TGG | + | chr4_3:34738115-34738134 | Msa0639110:intron | 40.0% | |
| ! | TCATTTAAGATCACTCTCGC+GGG | - | chr4_3:34738148-34738167 | None:intergenic | 40.0% |
| ! | TACAGAGAGTAAGCTTTTGG+TGG | + | chr4_3:34738230-34738249 | Msa0639110:CDS | 40.0% |
| ! | AGTATTGAACATCGAACAGC+AGG | - | chr4_3:34738563-34738582 | None:intergenic | 40.0% |
| GTGATAGAAGCTAGAAAGGA+AGG | + | chr4_3:34738777-34738796 | Msa0639110:CDS | 40.0% | |
| GAAGCTAGAAAGGAAGGAAT+TGG | + | chr4_3:34738783-34738802 | Msa0639110:CDS | 40.0% | |
| AGCAACTGGTGCATTGTAAA+AGG | - | chr4_3:34738841-34738860 | None:intergenic | 40.0% | |
| ! | CCTTACGAGCCAATTTTGTA+AGG | - | chr4_3:34738973-34738992 | None:intergenic | 40.0% |
| !! | CCTTACAAAATTGGCTCGTA+AGG | + | chr4_3:34738970-34738989 | Msa0639110:intron | 40.0% |
| !! | ACAAAATTGGCTCGTAAGGT+AGG | + | chr4_3:34738974-34738993 | Msa0639110:intron | 40.0% |
| !! | CAAAATTGGCTCGTAAGGTA+GGG | + | chr4_3:34738975-34738994 | Msa0639110:intron | 40.0% |
| GGAAAAACCAAGTCCCATAT+AGG | - | chr4_3:34739043-34739062 | None:intergenic | 40.0% | |
| !! | TTGGTCTTTTGGATGGCTAT+TGG | - | chr4_3:34739064-34739083 | None:intergenic | 40.0% |
| AATAGCCATCCAAAAGACCA+AGG | + | chr4_3:34739063-34739082 | Msa0639110:intron | 40.0% | |
| !! | ATAGACCTTGGTCTTTTGGA+TGG | - | chr4_3:34739071-34739090 | None:intergenic | 40.0% |
| !!! | TTCTTGTTTTGGTGCAGAAG+AGG | + | chr4_3:34739205-34739224 | Msa0639110:CDS | 40.0% |
| GCAATACTCAACACTTACTG+TGG | - | chr4_3:34739289-34739308 | None:intergenic | 40.0% | |
| AGGTGTGCAGTGACAAAATT+TGG | + | chr4_3:34739320-34739339 | Msa0639110:intron | 40.0% | |
| TTATCCATATTCCTTCTCCG+TGG | + | chr4_3:34739725-34739744 | Msa0639110:intron | 40.0% | |
| TATCCATATTCCTTCTCCGT+GGG | + | chr4_3:34739726-34739745 | Msa0639110:intron | 40.0% | |
| CAGTAGTGTGCAAAGAAACT+AGG | - | chr4_3:34739769-34739788 | None:intergenic | 40.0% | |
| !! | TACTGTCTACTTTTCATCCG+TGG | + | chr4_3:34739784-34739803 | Msa0639110:intron | 40.0% |
| TATCAACGGCAGGAAAATCA+AGG | - | chr4_3:34739918-34739937 | None:intergenic | 40.0% | |
| TAGCAAGAACGGTATACAAG+AGG | + | chr4_3:34739990-34740009 | Msa0639110:intron | 40.0% | |
| CAAATGTCCATGGAGTTACA+TGG | + | chr4_3:34740205-34740224 | Msa0639110:intron | 40.0% | |
| ATTCCAACCATGTAACTCCA+TGG | - | chr4_3:34740215-34740234 | None:intergenic | 40.0% | |
| AAGAAGTTCGTGAGGCATAT+AGG | + | chr4_3:34740532-34740551 | Msa0639110:CDS | 40.0% | |
| ATGGATTTGATCGATCAGGT+TGG | + | chr4_3:34740579-34740598 | Msa0639110:intron | 40.0% | |
| !!! | CATCATCCAGTTTTAGAGCT+TGG | + | chr4_3:34740782-34740801 | Msa0639110:intron | 40.0% |
| !! | AAGAGAGGGTTTTGTGCAAA+AGG | + | chr4_3:34740855-34740874 | Msa0639110:CDS | 40.0% |
| !! | GGGTTTTGTGCAAAAGGTAA+AGG | + | chr4_3:34740861-34740880 | Msa0639110:CDS | 40.0% |
| GTAAAGGATGAAGAAGGTGA+AGG | + | chr4_3:34740877-34740896 | Msa0639110:CDS | 40.0% | |
| GGTGAAGGATGCAATATTCA+TGG | + | chr4_3:34740892-34740911 | Msa0639110:CDS | 40.0% | |
| CTTGAAGTGAATAAAGTGGC+AGG | + | chr4_3:34740919-34740938 | Msa0639110:CDS | 40.0% | |
| TAGCTGACTGAAGAAAGCTT+TGG | - | chr4_3:34740966-34740985 | None:intergenic | 40.0% | |
| TCTTCAGTCAGCTATCTTTC+TGG | + | chr4_3:34740972-34740991 | Msa0639110:CDS | 40.0% | |
| GATTAACCAATCCAGGGTAA+TGG | - | chr4_3:34741203-34741222 | None:intergenic | 40.0% | |
| CAAGAGGATTAACCAATCCA+GGG | - | chr4_3:34741209-34741228 | None:intergenic | 40.0% | |
| TCAAGAGGATTAACCAATCC+AGG | - | chr4_3:34741210-34741229 | None:intergenic | 40.0% | |
| !! | GGATTGGTTAATCCTCTTGA+TGG | + | chr4_3:34741210-34741229 | Msa0639110:CDS | 40.0% |
| ATAACTTAGCCATTCCTTGG+TGG | + | chr4_3:34741406-34741425 | Msa0639110:intron | 40.0% | |
| AGGCGAGAAATATTGCATTC+TGG | + | chr4_3:34741654-34741673 | Msa0639110:intron | 40.0% | |
| ! | AGATTTTGTATGCCGCTAGT+TGG | + | chr4_3:34741761-34741780 | Msa0639110:intron | 40.0% |
| AATCAATGAGAAGGGCAAAC+TGG | + | chr4_3:34741856-34741875 | Msa0639110:intron | 40.0% | |
| ATCAATGAGAAGGGCAAACT+GGG | + | chr4_3:34741857-34741876 | Msa0639110:intron | 40.0% | |
| CAAGTATTAGCCCTGTTCAT+TGG | - | chr4_3:34741883-34741902 | None:intergenic | 40.0% | |
| ATAGGCCAAATCTAATGGCT+AGG | - | chr4_3:34742031-34742050 | None:intergenic | 40.0% | |
| AGCCATTAGATTTGGCCTAT+AGG | + | chr4_3:34742031-34742050 | Msa0639110:intron | 40.0% | |
| AGCCTATAGGCCAAATCTAA+TGG | - | chr4_3:34742036-34742055 | None:intergenic | 40.0% | |
| CCTATAGGCTTGTAATGTGA+GGG | + | chr4_3:34742046-34742065 | Msa0639110:intron | 40.0% | |
| TTGGTACGTGAGTAATACAG+TGG | + | chr4_3:34742162-34742181 | Msa0639110:intron | 40.0% | |
| !! | TGGCTCATTTTAGCAGATCT+AGG | + | chr4_3:34742182-34742201 | Msa0639110:intron | 40.0% |
| ! | GGTGAGACTTTTGCAGAAAT+AGG | + | chr4_3:34742367-34742386 | Msa0639110:intron | 40.0% |
| ACATGCCATGATCATTTCCT+TGG | - | chr4_3:34742513-34742532 | None:intergenic | 40.0% | |
| CAGGCGAACAAATTTCAATG+AGG | - | chr4_3:34742584-34742603 | None:intergenic | 40.0% | |
| TCATAAGTGCATCTACCAGT+GGG | - | chr4_3:34742783-34742802 | None:intergenic | 40.0% | |
| ATCATAAGTGCATCTACCAG+TGG | - | chr4_3:34742784-34742803 | None:intergenic | 40.0% | |
| CTAATGTCCGTGTATACTGT+AGG | - | chr4_3:34742915-34742934 | None:intergenic | 40.0% | |
| ACAGTATACACGGACATTAG+AGG | + | chr4_3:34742915-34742934 | Msa0639110:CDS | 40.0% | |
| GCATTTCAAGAGTTCAGAAC+TGG | + | chr4_3:34743059-34743078 | Msa0639110:CDS | 40.0% | |
| TAAGCGTTATCAAGGGAAGA+AGG | - | chr4_3:34743193-34743212 | None:intergenic | 40.0% | |
| AAGACCATTAATGTTGTGCC+TGG | - | chr4_3:34743247-34743266 | None:intergenic | 40.0% | |
| TAGCCAAGGAAATACTGAGA+AGG | - | chr4_3:34743290-34743309 | None:intergenic | 40.0% | |
| TTCTCAGTATTTCCTTGGCT+AGG | + | chr4_3:34743289-34743308 | Msa0639110:intron | 40.0% | |
| TCTCAGTATTTCCTTGGCTA+GGG | + | chr4_3:34743290-34743309 | Msa0639110:intron | 40.0% | |
| ! | GCTTTTCTTGCCTGATTTTG+CGG | + | chr4_3:34743370-34743389 | Msa0639110:intron | 40.0% |
| AAACAGAGCCCAAATGTCAT+AGG | - | chr4_3:34743436-34743455 | None:intergenic | 40.0% | |
| TGTTATTAGAGATGGGGGAT+AGG | + | chr4_3:34743486-34743505 | Msa0639110:intron | 40.0% | |
| ACTGCCATGACTATACACTT+TGG | + | chr4_3:34743616-34743635 | Msa0639110:intron | 40.0% | |
| CCATCCAAAGTGTATAGTCA+TGG | - | chr4_3:34743623-34743642 | None:intergenic | 40.0% | |
| CCATGACTATACACTTTGGA+TGG | + | chr4_3:34743620-34743639 | Msa0639110:intron | 40.0% | |
| ! | GTTGCAGGTCAACTTTAAAG+AGG | + | chr4_3:34743914-34743933 | Msa0639110:intron | 40.0% |
| ATTCACAATTGCGGGAATTG+TGG | + | chr4_3:34744099-34744118 | Msa0639110:CDS | 40.0% | |
| TCACACTATCCTTCCTACAT+CGG | + | chr4_3:34744197-34744216 | Msa0639110:three_prime_UTR | 40.0% | |
| AGTCATGAGCAGATTCAACT+TGG | - | chr4_3:34744234-34744253 | None:intergenic | 40.0% | |
| ! | ATCTGCTCATGACTTGTACT+TGG | + | chr4_3:34744240-34744259 | Msa0639110:three_prime_UTR | 40.0% |
| TCTACAGCTCGTCTTAATCA+TGG | - | chr4_3:34744296-34744315 | None:intergenic | 40.0% | |
| !! | TTCACAAGCACCGAATTGTG+AGG | - | chr4_3:34737137-34737156 | None:intergenic | 45.0% |
| !!! | TTCGGTGCTTGTGAAGCTTT+TGG | + | chr4_3:34737142-34737161 | Msa0639110:five_prime_UTR | 45.0% |
| CTTCAACAAGCTCCGCAATT+TGG | + | chr4_3:34737185-34737204 | Msa0639110:CDS | 45.0% | |
| ! | TTTTATAACCGCACTCTCGC+CGG | + | chr4_3:34737234-34737253 | Msa0639110:CDS | 45.0% |
| ! | AAAGAGGAAAAGCATGACGG+CGG | - | chr4_3:34737283-34737302 | None:intergenic | 45.0% |
| GGATGGGATCATTATTGCTG+TGG | + | chr4_3:34737488-34737507 | Msa0639110:intron | 45.0% | |
| GATTCAATGTGCCAACTGCA+AGG | + | chr4_3:34737692-34737711 | Msa0639110:intron | 45.0% | |
| AACTCTCATTGCCTTGCAGT+TGG | - | chr4_3:34737706-34737725 | None:intergenic | 45.0% | |
| GGATGGGATCATTATTGCTG+TGG | + | chr4_3:34737488-34737507 | Msa0639110:intron | 45.0% | |
| !! | AGCTTTTGGTGGATACTTCG+AGG | + | chr4_3:34738241-34738260 | Msa0639110:CDS | 45.0% |
| !! | GCTTTTGGTGGATACTTCGA+GGG | + | chr4_3:34738242-34738261 | Msa0639110:CDS | 45.0% |
| !! | CTTTTGGTGGATACTTCGAG+GGG | + | chr4_3:34738243-34738262 | Msa0639110:CDS | 45.0% |
| ATGGTCTGGGTCATGATTCA+TGG | + | chr4_3:34738358-34738377 | Msa0639110:intron | 45.0% | |
| TGGTCTGGGTCATGATTCAT+GGG | + | chr4_3:34738359-34738378 | Msa0639110:intron | 45.0% | |
| CAATGGATATTAGTGGCGAG+CGG | + | chr4_3:34738594-34738613 | Msa0639110:CDS | 45.0% | |
| AATGCACCAGTTGCTTGCTT+TGG | + | chr4_3:34738846-34738865 | Msa0639110:intron | 45.0% | |
| TCAGATCCAAAGCAAGCAAC+TGG | - | chr4_3:34738855-34738874 | None:intergenic | 45.0% | |
| ! | GTTGCTTGCTTTGGATCTGA+TGG | + | chr4_3:34738855-34738874 | Msa0639110:intron | 45.0% |
| ! | CAATTTTGTAAGGCTGGGCT+AGG | - | chr4_3:34738963-34738982 | None:intergenic | 45.0% |
| CTAGCCCAGCCTTACAAAAT+TGG | + | chr4_3:34738961-34738980 | Msa0639110:intron | 45.0% | |
| ! | CGAGCCAATTTTGTAAGGCT+GGG | - | chr4_3:34738968-34738987 | None:intergenic | 45.0% |
| ! | ACGAGCCAATTTTGTAAGGC+TGG | - | chr4_3:34738969-34738988 | None:intergenic | 45.0% |
| GGGCCTTTCAATCTGCAATA+GGG | - | chr4_3:34739138-34739157 | None:intergenic | 45.0% | |
| AGGGCCTTTCAATCTGCAAT+AGG | - | chr4_3:34739139-34739158 | None:intergenic | 45.0% | |
| GAAAGGCCCTTACAGAAACA+TGG | + | chr4_3:34739149-34739168 | Msa0639110:CDS | 45.0% | |
| ! | CTGCCACCATGTTTCTGTAA+GGG | - | chr4_3:34739158-34739177 | None:intergenic | 45.0% |
| AAAAAGTTCCCTTGAGACGC+CGG | + | chr4_3:34739365-34739384 | Msa0639110:intron | 45.0% | |
| TGTGCAAAGAAACTAGGCCA+TGG | - | chr4_3:34739763-34739782 | None:intergenic | 45.0% | |
| TAGGCTGATGCAAATGTCCA+TGG | + | chr4_3:34740195-34740214 | Msa0639110:intron | 45.0% | |
| TGTCCATGGAGTTACATGGT+TGG | + | chr4_3:34740209-34740228 | Msa0639110:intron | 45.0% | |
| TCGTGAGGCATATAGGAAGA+AGG | + | chr4_3:34740539-34740558 | Msa0639110:CDS | 45.0% | |
| CGTGAGGCATATAGGAAGAA+GGG | + | chr4_3:34740540-34740559 | Msa0639110:CDS | 45.0% | |
| AGGCATATAGGAAGAAGGGA+TGG | + | chr4_3:34740544-34740563 | Msa0639110:CDS | 45.0% | |
| GGCATATAGGAAGAAGGGAT+GGG | + | chr4_3:34740545-34740564 | Msa0639110:CDS | 45.0% | |
| !! | AGGTTGCCAAGCTCTAAAAC+TGG | - | chr4_3:34740791-34740810 | None:intergenic | 45.0% |
| !! | AGTTTTGGTCACCATTACCC+TGG | + | chr4_3:34741189-34741208 | Msa0639110:CDS | 45.0% |
| GAGCCCAACCATTTGAATGA+AGG | - | chr4_3:34741519-34741538 | None:intergenic | 45.0% | |
| CCTAGCATTCACATTCAGCA+TGG | - | chr4_3:34741637-34741656 | None:intergenic | 45.0% | |
| CCATGCTGAATGTGAATGCT+AGG | + | chr4_3:34741634-34741653 | Msa0639110:intron | 45.0% | |
| ! | TTTTGTATGCCGCTAGTTGG+CGG | + | chr4_3:34741764-34741783 | Msa0639110:intron | 45.0% |
| TAATGGCTAGGCATGCAATG+GGG | - | chr4_3:34742019-34742038 | None:intergenic | 45.0% | |
| CTAATGGCTAGGCATGCAAT+GGG | - | chr4_3:34742020-34742039 | None:intergenic | 45.0% | |
| TCTAATGGCTAGGCATGCAA+TGG | - | chr4_3:34742021-34742040 | None:intergenic | 45.0% | |
| GCATGCCTAGCCATTAGATT+TGG | + | chr4_3:34742023-34742042 | Msa0639110:intron | 45.0% | |
| GCCTATAGGCTTGTAATGTG+AGG | + | chr4_3:34742045-34742064 | Msa0639110:intron | 45.0% | |
| CCCTCACATTACAAGCCTAT+AGG | - | chr4_3:34742049-34742068 | None:intergenic | 45.0% | |
| TCAATAGTGTTAGGCGCTAG+GGG | - | chr4_3:34742140-34742159 | None:intergenic | 45.0% | |
| CTCAATAGTGTTAGGCGCTA+GGG | - | chr4_3:34742141-34742160 | None:intergenic | 45.0% | |
| ACTCAATAGTGTTAGGCGCT+AGG | - | chr4_3:34742142-34742161 | None:intergenic | 45.0% | |
| GCGCCTAACACTATTGAGTT+TGG | + | chr4_3:34742143-34742162 | Msa0639110:intron | 45.0% | |
| CAACTCACAAGTCAGCTTAG+TGG | - | chr4_3:34742251-34742270 | None:intergenic | 45.0% | |
| CTCTTCTCCTAATGCTTTGC+AGG | + | chr4_3:34742476-34742495 | Msa0639110:intron | 45.0% | |
| TGCAGGATAAAATGGGTCCA+AGG | + | chr4_3:34742493-34742512 | Msa0639110:intron | 45.0% | |
| TGGGTCCAAGGAAATGATCA+TGG | + | chr4_3:34742505-34742524 | Msa0639110:CDS | 45.0% | |
| ! | TTTCATGACCCTTTTCCCAC+TGG | + | chr4_3:34742765-34742784 | Msa0639110:intron | 45.0% |
| TGCATCTACCAGTGGGAAAA+GGG | - | chr4_3:34742776-34742795 | None:intergenic | 45.0% | |
| ACTCTTGAAATGCTCGGTCA+CGG | - | chr4_3:34743052-34743071 | None:intergenic | 45.0% | |
| CATGTCAGATTGTTACAGCC+AGG | + | chr4_3:34743226-34743245 | Msa0639110:intron | 45.0% | |
| ACAGCCAGGCACAACATTAA+TGG | + | chr4_3:34743240-34743259 | Msa0639110:intron | 45.0% | |
| CAACAACAATTCCCTAGCCA+AGG | - | chr4_3:34743304-34743323 | None:intergenic | 45.0% | |
| TTAGAGATGGGGGATAGGAA+AGG | + | chr4_3:34743491-34743510 | Msa0639110:intron | 45.0% | |
| AACTTCAAGGTGGACGTGAA+GGG | - | chr4_3:34743576-34743595 | None:intergenic | 45.0% | |
| AAACTTCAAGGTGGACGTGA+AGG | - | chr4_3:34743577-34743596 | None:intergenic | 45.0% | |
| !! | ATTAGAGCACCGATGTAGGA+AGG | - | chr4_3:34744209-34744228 | None:intergenic | 45.0% |
| ! | GCTCATGACTTGTACTTGGT+TGG | + | chr4_3:34744244-34744263 | Msa0639110:three_prime_UTR | 45.0% |
| !!! | TTTTGTTTTTTTTTTTTTTT+TGG | + | chr4_3:34741829-34741848 | Msa0639110:intron | 5.0% |
| !! | TTGGATTGGCGGTGAGATGT+CGG | + | chr4_3:34737864-34737883 | Msa0639110:intron | 50.0% |
| ! | TCGGAAAGTCACCCCAGTTT+TGG | + | chr4_3:34737883-34737902 | Msa0639110:intron | 50.0% |
| ! | GCTTGCTTTGGATCTGATGG+AGG | + | chr4_3:34738858-34738877 | Msa0639110:intron | 50.0% |
| AGGCCCTTACAGAAACATGG+TGG | + | chr4_3:34739152-34739171 | Msa0639110:CDS | 50.0% | |
| ! | CCTGCCACCATGTTTCTGTA+AGG | - | chr4_3:34739159-34739178 | None:intergenic | 50.0% |
| CCTTACAGAAACATGGTGGC+AGG | + | chr4_3:34739156-34739175 | Msa0639110:CDS | 50.0% | |
| AAAAGTTCCCTTGAGACGCC+GGG | + | chr4_3:34739366-34739385 | Msa0639110:intron | 50.0% | |
| AAAAAACCCCGGCGTCTCAA+GGG | - | chr4_3:34739376-34739395 | None:intergenic | 50.0% | |
| AAAAAAACCCCGGCGTCTCA+AGG | - | chr4_3:34739377-34739396 | None:intergenic | 50.0% | |
| TCAACGAGGCATGAGCTCTT+TGG | - | chr4_3:34739421-34739440 | None:intergenic | 50.0% | |
| CTAAAAACTGCCCACGGAGA+AGG | - | chr4_3:34739739-34739758 | None:intergenic | 50.0% | |
| ! | CTTCTCCGTGGGCAGTTTTT+AGG | + | chr4_3:34739737-34739756 | Msa0639110:intron | 50.0% |
| CATGGCCTAAAAACTGCCCA+CGG | - | chr4_3:34739745-34739764 | None:intergenic | 50.0% | |
| !! | GGGATGGGCACTGACAAATA+TGG | + | chr4_3:34740560-34740579 | Msa0639110:CDS | 50.0% |
| GGCTGATCTACTTGCTTTGC+AGG | + | chr4_3:34740993-34741012 | Msa0639110:CDS | 50.0% | |
| TGGTCACCATTACCCTGGAT+TGG | + | chr4_3:34741194-34741213 | Msa0639110:CDS | 50.0% | |
| CTTAGCCATTCCTTGGTGGA+TGG | + | chr4_3:34741410-34741429 | Msa0639110:intron | 50.0% | |
| ACACACCATCCACCAAGGAA+TGG | - | chr4_3:34741418-34741437 | None:intergenic | 50.0% | |
| ! | ATTCCTTGGTGGATGGTGTG+TGG | + | chr4_3:34741417-34741436 | Msa0639110:intron | 50.0% |
| GCAAACTGGGCCAATGAACA+GGG | + | chr4_3:34741870-34741889 | Msa0639110:intron | 50.0% | |
| CAGCTTAGTGGAGTCGAGTT+AGG | - | chr4_3:34742239-34742258 | None:intergenic | 50.0% | |
| GTGCATCTACCAGTGGGAAA+AGG | - | chr4_3:34742777-34742796 | None:intergenic | 50.0% | |
| GGTGGTCCCTACAGTATACA+CGG | + | chr4_3:34742905-34742924 | Msa0639110:intron | 50.0% | |
| GAGTTCGTGACCGCAAAATC+AGG | - | chr4_3:34743383-34743402 | None:intergenic | 50.0% | |
| !! | GGACATTAGAGCACCGATGT+AGG | - | chr4_3:34744213-34744232 | None:intergenic | 50.0% |
| AAGATCACTCTCGCGGGATC+TGG | - | chr4_3:34738142-34738161 | None:intergenic | 55.0% | |
| GGAAGGAATTGGCGCACCAA+AGG | + | chr4_3:34738794-34738813 | Msa0639110:CDS | 55.0% | |
| AAAGTTCCCTTGAGACGCCG+GGG | + | chr4_3:34739367-34739386 | Msa0639110:intron | 55.0% | |
| CTGCCCACGGAGAAGGAATA+TGG | - | chr4_3:34739732-34739751 | None:intergenic | 55.0% | |
| !! | CGTGGGCAGTTTTTAGGCCA+TGG | + | chr4_3:34739743-34739762 | Msa0639110:intron | 55.0% |
| TGACCACACACCATCCACCA+AGG | - | chr4_3:34741423-34741442 | None:intergenic | 55.0% | |
| TGCATGCAACCGCCAACTAG+CGG | - | chr4_3:34741776-34741795 | None:intergenic | 55.0% | |
| TTGGCGGTTGCATGCACAGA+TGG | + | chr4_3:34741780-34741799 | Msa0639110:intron | 55.0% | |
| TGGCGGTTGCATGCACAGAT+GGG | + | chr4_3:34741781-34741800 | Msa0639110:intron | 55.0% | |
| GGCAAACTGGGCCAATGAAC+AGG | + | chr4_3:34741869-34741888 | Msa0639110:intron | 55.0% | |
| TGAGGAGTCAGGGACTTCGA+AGG | + | chr4_3:34741984-34742003 | Msa0639110:intron | 55.0% | |
| TGCTCGGTCACGGAATACTG+TGG | - | chr4_3:34743042-34743061 | None:intergenic | 55.0% | |
| ! | AGAACTGGGTGCTGCAGTTC+CGG | + | chr4_3:34743074-34743093 | Msa0639110:CDS | 55.0% |
| TATAACCGCACTCTCGCCGG+AGG | + | chr4_3:34737237-34737256 | Msa0639110:CDS | 60.0% | |
| ! | GAGGAAAAGCATGACGGCGG+CGG | - | chr4_3:34737280-34737299 | None:intergenic | 60.0% |
| ! | TTGTAAGGCTGGGCTAGGCC+CGG | - | chr4_3:34738958-34738977 | None:intergenic | 60.0% |
| ! | GAACTGGGTGCTGCAGTTCC+GGG | + | chr4_3:34743075-34743094 | Msa0639110:CDS | 60.0% |
| ! | AGGCGATAACGGCGCTCCGT+CGG | - | chr4_3:34737104-34737123 | None:intergenic | 65.0% |
| GACGACGGTGACGACACCTC+CGG | - | chr4_3:34737256-34737275 | None:intergenic | 65.0% | |
| GGCTAGGCATGCAATGGGGC+AGG | - | chr4_3:34742015-34742034 | None:intergenic | 65.0% | |
| TAACGGCGCTCCGTCGGCGA+CGG | - | chr4_3:34737098-34737117 | None:intergenic | 70.0% | |
| CGACACCTCCGGCGAGAGTG+CGG | - | chr4_3:34737245-34737264 | None:intergenic | 70.0% | |
| CATGACGGCGGCGGAGACGA+CGG | - | chr4_3:34737271-34737290 | None:intergenic | 70.0% | |
| TCTCCGGCCACCGTCGCCGA+CGG | + | chr4_3:34737085-34737104 | Msa0639110:five_prime_UTR | 75.0% | |
| ! | GCTCCGTCGGCGACGGTGGC+CGG | - | chr4_3:34737091-34737110 | None:intergenic | 80.0% |
| ! | CGGCGCTCCGTCGGCGACGG+TGG | - | chr4_3:34737095-34737114 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 34736975 | 34744545 | 34736975 | ID=Msa0639110;Name=Msa0639110 |
| chr4_3 | mRNA | 34736975 | 34744545 | 34736975 | ID=Msa0639110-mRNA-1;Parent=Msa0639110;Name=Msa0639110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=199|1|1|1|1|1|13|359|384 |
| chr4_3 | exon | 34736975 | 34737315 | 34736975 | ID=Msa0639110-mRNA-1:exon:8088;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34738211 | 34738284 | 34738211 | ID=Msa0639110-mRNA-1:exon:8089;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34738545 | 34738628 | 34738545 | ID=Msa0639110-mRNA-1:exon:8090;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34738735 | 34738815 | 34738735 | ID=Msa0639110-mRNA-1:exon:8091;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34739146 | 34739226 | 34739146 | ID=Msa0639110-mRNA-1:exon:8092;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34740504 | 34740596 | 34740504 | ID=Msa0639110-mRNA-1:exon:8093;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34740850 | 34741029 | 34740850 | ID=Msa0639110-mRNA-1:exon:8094;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34741165 | 34741232 | 34741165 | ID=Msa0639110-mRNA-1:exon:8095;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34742498 | 34742549 | 34742498 | ID=Msa0639110-mRNA-1:exon:8096;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34742906 | 34742959 | 34742906 | ID=Msa0639110-mRNA-1:exon:8097;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34743045 | 34743131 | 34743045 | ID=Msa0639110-mRNA-1:exon:8098;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34743921 | 34743987 | 34743921 | ID=Msa0639110-mRNA-1:exon:8099;Parent=Msa0639110-mRNA-1 |
| chr4_3 | exon | 34744095 | 34744545 | 34744095 | ID=Msa0639110-mRNA-1:exon:8100;Parent=Msa0639110-mRNA-1 |
| chr4_3 | five_prime_UTR | 34736975 | 34737173 | 34736975 | ID=Msa0639110-mRNA-1:five_prime_utr;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34737174 | 34737315 | 34737174 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34738211 | 34738284 | 34738211 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34738545 | 34738628 | 34738545 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34738735 | 34738815 | 34738735 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34739146 | 34739226 | 34739146 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34740504 | 34740596 | 34740504 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34740850 | 34741029 | 34740850 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34741165 | 34741232 | 34741165 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34742498 | 34742549 | 34742498 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34742906 | 34742959 | 34742906 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34743045 | 34743131 | 34743045 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34743921 | 34743987 | 34743921 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | CDS | 34744095 | 34744186 | 34744095 | ID=Msa0639110-mRNA-1:cds;Parent=Msa0639110-mRNA-1 |
| chr4_3 | three_prime_UTR | 34744187 | 34744545 | 34744187 | ID=Msa0639110-mRNA-1:three_prime_utr;Parent=Msa0639110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
