AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1024710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024710 MtrunA17_Chr7g0242641 99.164 359 3 0 60 418 1 359 0.0 735
Msa1024710 MtrunA17_Chr4g0029681 29.677 310 208 3 101 403 107 413 2.23e-42 154
Msa1024710 MtrunA17_Chr7g0242631 92.537 67 5 0 1 67 1 67 7.40e-39 136
Msa1024710 MtrunA17_Chr4g0040751 22.788 373 240 12 64 390 100 470 1.89e-12 69.3
Msa1024710 MtrunA17_Chr4g0055941 25.581 344 197 12 116 403 98 438 3.11e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024710 AT3G51840.1 81.862 419 60 2 15 418 19 436 0.0 725
Msa1024710 AT3G45300.1 30.323 310 206 4 101 403 99 405 7.68e-41 150
Msa1024710 AT5G65110.2 26.100 341 196 12 106 390 136 476 1.43e-15 79.3
Msa1024710 AT5G65110.1 26.100 341 196 12 106 390 136 476 1.57e-15 79.3

Find 236 sgRNAs with CRISPR-Local

Find 589 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGAAACATTGGAGAATT+TGG 0.139343 7_1:-54467207 None:intergenic
TCTTGTAAACAAAACTTTAA+AGG 0.148726 7_1:-54467429 None:intergenic
ACCTCAACAAATCAAATAAA+TGG 0.162779 7_1:+54462978 Msa1024710:CDS
AATTGTTGAATTTGAGTATT+TGG 0.166811 7_1:+54459417 Msa1024710:five_prime_UTR
ATTTACAACTCTAACTTAAT+TGG 0.178617 7_1:+54459510 Msa1024710:five_prime_UTR
CAGCTCAAGGTTAGGTCTTT+AGG 0.181912 7_1:-54467083 None:intergenic
CAAGTTTCTGTTGGTTGATT+TGG 0.189805 7_1:-54464778 None:intergenic
GCTTGGTGGCAATGGAATTT+TGG 0.204044 7_1:+54465268 Msa1024710:CDS
CAAATTGTTTCCTCTCCTTT+AGG 0.236337 7_1:-54464736 None:intergenic
TGTCCTGGTCTTTCCGTAAC+TGG 0.238338 7_1:+54462341 Msa1024710:CDS
AATGTTTGAGATTTCTGCTT+TGG 0.286414 7_1:+54466448 Msa1024710:three_prime_UTR
TTTATTGAATGCTTCTGTTT+TGG 0.291637 7_1:-54466246 None:intergenic
AAATCATTTCTCTGGGTTGC+AGG 0.295185 7_1:-54467476 None:intergenic
TGTTTCCTATCCACCGCTTT+TGG 0.303153 7_1:-54462917 None:intergenic
AAGTTGTTCAACTTTCATTT+TGG 0.313392 7_1:+54462403 Msa1024710:CDS
ACCACCATGGTTCAGTTCAT+TGG 0.318254 7_1:-54467501 None:intergenic
ATTATATTATTGTATTCTAT+TGG 0.321777 7_1:+54466198 Msa1024710:three_prime_UTR
GGCAAGAGAAACAGCTGCTT+TGG 0.325894 7_1:+54465235 Msa1024710:CDS
TATTCCAAAGCTTGGTGAAC+TGG 0.343760 7_1:+54462202 Msa1024710:CDS
ATCCTAATGGCCTGCTCCTC+CGG 0.344421 7_1:-54461632 None:intergenic
TTCAATTCAAATCATTTGAA+TGG 0.357436 7_1:+54459265 Msa1024710:five_prime_UTR
CTCATCAAGGAAACATCATT+AGG 0.360122 7_1:+54466842 Msa1024710:three_prime_UTR
GTCATCTATGTATTAATCTT+AGG 0.360917 7_1:+54467737 Msa1024710:three_prime_UTR
GGACTTCGAATCGTACAAAA+TGG 0.361890 7_1:+54463739 Msa1024710:CDS
CCTCCTATTCTGTCCTCATC+AGG 0.367546 7_1:-54463790 None:intergenic
GTGTTTGAGTAGTTCATTCA+TGG 0.368027 7_1:-54467258 None:intergenic
AAGAATTGTATGTGTTGTTA+TGG 0.369554 7_1:+54459545 Msa1024710:five_prime_UTR
GGTTATATAAAGTGGAAAAC+AGG 0.374018 7_1:-54466414 None:intergenic
GTGATTGATTCTCAGGGTTA+TGG 0.374156 7_1:+54462317 Msa1024710:intron
TTCATTATGTTGTGCGGCAA+CGG 0.374871 7_1:+54459173 Msa1024710:five_prime_UTR
GAGAGAACTCAATGATGAAT+TGG 0.379688 7_1:-54467345 None:intergenic
AGCTTTGGAATAGCATGAAA+TGG 0.380127 7_1:-54462191 None:intergenic
CTCTCTCACTTTCATCCTAA+TGG 0.383281 7_1:-54461645 None:intergenic
TGATGGGAAGAAGAAGAAAA+TGG 0.383375 7_1:-54459761 None:intergenic
CTTGGTGAACTGGGTATTGC+TGG 0.383548 7_1:+54462212 Msa1024710:CDS
ATTCTACTTCTTTGAGTAGC+TGG 0.385413 7_1:-54466142 None:intergenic
TGTGTTAAGGTGTCATTAAA+AGG 0.385871 7_1:+54459664 Msa1024710:five_prime_UTR
ATGTTGTGCGGCAACGGCGG+CGG 0.387038 7_1:+54459179 Msa1024710:five_prime_UTR
AACAGAGTACTCTGCCACTA+TGG 0.388099 7_1:-54467581 None:intergenic
CTGAGCTTCAGCTCAAGGTT+AGG 0.397341 7_1:-54467091 None:intergenic
GCAAGAGAAACAGCTGCTTT+GGG 0.399586 7_1:+54465236 Msa1024710:CDS
GGCTAAGGTACATGAGAGTA+TGG 0.400367 7_1:-54467324 None:intergenic
CTAAAGGAGAGGAAACAATT+TGG 0.400638 7_1:+54464737 Msa1024710:CDS
CAGTACGTTTGCTGATTTGT+TGG 0.403155 7_1:+54462938 Msa1024710:CDS
TCTCAGGGTTATGGTTGTCC+TGG 0.404078 7_1:+54462326 Msa1024710:intron
AATGTTTCCTTGAATGAACT+TGG 0.408940 7_1:+54467218 Msa1024710:three_prime_UTR
ATTATTTCACATGAGAAAAC+AGG 0.410370 7_1:+54459701 Msa1024710:five_prime_UTR
TGGCTTAAAGCTGGCAAAAC+CGG 0.419309 7_1:-54466122 None:intergenic
ACGGCGGCGGCGCACCACGA+CGG 0.421595 7_1:+54459192 Msa1024710:five_prime_UTR
AAGAGTTGGCTGATTCTGAT+AGG 0.422384 7_1:-54467616 None:intergenic
CTTCTAACTTTGTCAAGAAC+TGG 0.423293 7_1:+54467293 Msa1024710:three_prime_UTR
GATGGGTTTGGGAGGAAAGT+AGG 0.423775 7_1:-54459042 None:intergenic
GCCTTGACTGAACCTGACTA+TGG 0.430881 7_1:+54462704 Msa1024710:CDS
CGATTGGGTTGGTTTGTGTT+GGG 0.433509 7_1:-54459801 None:intergenic
CATGATTCATCATTCACCCT+TGG 0.436924 7_1:+54467033 Msa1024710:three_prime_UTR
GCAACCTATTGGTATATCAA+TGG 0.437177 7_1:+54464432 Msa1024710:CDS
TCAGTCATGGATTACCTTGA+GGG 0.437471 7_1:+54465214 Msa1024710:intron
ATACCCAGTTCACCAAGCTT+TGG 0.439876 7_1:-54462206 None:intergenic
GCGATTGGGTTGGTTTGTGT+TGG 0.441265 7_1:-54459802 None:intergenic
GGGAGGAAAGTAGGTTGAGA+TGG 0.445195 7_1:-54459033 None:intergenic
AGTGAAGAGGTTATATAAAG+TGG 0.446034 7_1:-54466422 None:intergenic
CATGCAATGCATCCTTCATC+AGG 0.446070 7_1:-54466808 None:intergenic
GTTTGAGTTGTGTAATACAT+AGG 0.449195 7_1:-54466915 None:intergenic
AACCTTCAATTTGTTCAACC+TGG 0.450375 7_1:-54459481 None:intergenic
GAAGGTGGTTGGATCCTTGA+GGG 0.453581 7_1:+54462894 Msa1024710:CDS
ATTCGATGACTTGTTGAAAC+CGG 0.454041 7_1:+54461613 Msa1024710:CDS
ATGCCCATTGATATACCAAT+AGG 0.454299 7_1:-54464436 None:intergenic
GGAGGAAAGTAGGTTGAGAT+GGG 0.461115 7_1:-54459032 None:intergenic
GTCACAGGAAGAGAAGTTAC+CGG 0.462870 7_1:+54466103 Msa1024710:CDS
CAACCTATTGGTATATCAAT+GGG 0.463504 7_1:+54464433 Msa1024710:CDS
TTTGAAGACCACAGCAACTA+AGG 0.463606 7_1:+54462742 Msa1024710:CDS
TTGATTTGGAAAGCTGCTAA+TGG 0.465853 7_1:-54464764 None:intergenic
GTTCAAGCGATGATTCTTGT+TGG 0.466273 7_1:+54464818 Msa1024710:CDS
TCATCAAGGAAACATCATTA+GGG 0.466898 7_1:+54466843 Msa1024710:three_prime_UTR
CCCATTTATTTGATTTGTTG+AGG 0.467948 7_1:-54462979 None:intergenic
TTTCATGCTATTCCAAAGCT+TGG 0.468013 7_1:+54462194 Msa1024710:CDS
GGAAGGTAAATTGAAGCGAT+TGG 0.470473 7_1:-54459817 None:intergenic
TACAGTTCCAAGTTCATTCA+AGG 0.471092 7_1:-54467225 None:intergenic
TCCCAGGTTGAACAAATTGA+AGG 0.471238 7_1:+54459479 Msa1024710:five_prime_UTR
ATGGTTGCTTGGCAACCTAT+TGG 0.472285 7_1:+54464421 Msa1024710:CDS
ACCCCGGGTCATGCTAGCTT+GGG 0.475227 7_1:+54464878 Msa1024710:CDS
CGAGAATTGCTTGGTGGCAA+TGG 0.475251 7_1:+54465260 Msa1024710:CDS
CAAGGGTGAATGATGAATCA+TGG 0.476030 7_1:-54467032 None:intergenic
CTTGCATCACTTCCATAGTC+AGG 0.476058 7_1:-54462716 None:intergenic
TCCTTGGCAATGCTCACTAT+AGG 0.476560 7_1:+54462434 Msa1024710:CDS
AAGCGATGATTCTTGTTGGT+TGG 0.476633 7_1:+54464822 Msa1024710:CDS
TGACACATTAAAATGAATGA+AGG 0.477682 7_1:+54459634 Msa1024710:five_prime_UTR
CCTCAACAAATCAAATAAAT+GGG 0.478793 7_1:+54462979 Msa1024710:CDS
TTTGAGTTGTGTAATACATA+GGG 0.479261 7_1:-54466914 None:intergenic
CTTGTTGAAACCGGAGGAGC+AGG 0.479717 7_1:+54461622 Msa1024710:CDS
TCATAGCATTCACCAACAAA+AGG 0.484273 7_1:-54466372 None:intergenic
TGTTGCTGAGCTTCAGCTCA+AGG 0.485401 7_1:-54467096 None:intergenic
AGCAATAGCACTTCCAGTTA+CGG 0.487875 7_1:-54462354 None:intergenic
GAAGGTAAATTGAAGCGATT+GGG 0.487886 7_1:-54459816 None:intergenic
CTTCATAGTATTGTCCATAG+TGG 0.487991 7_1:+54467567 Msa1024710:three_prime_UTR
TTGAGTAGCTGGCTTAAAGC+TGG 0.489549 7_1:-54466131 None:intergenic
AACCGGAGGAGCAGGCCATT+AGG 0.489646 7_1:+54461630 Msa1024710:CDS
TGGGTTGCAGGGTTTAAACC+AGG 0.490000 7_1:-54467464 None:intergenic
TTGATGAATTTCTCCAAGGA+TGG 0.491291 7_1:-54467694 None:intergenic
TTTCGCGTGTGATGGTTGCT+TGG 0.491652 7_1:+54464410 Msa1024710:CDS
TTTCCTTGATGAGCAAGATC+AGG 0.491750 7_1:-54466832 None:intergenic
AGCTGTTTCTCTTGCCCTCA+AGG 0.492161 7_1:-54465228 None:intergenic
GAGAGAGATACCTTGTGGAT+TGG 0.493364 7_1:-54459884 None:intergenic
CACGTATGAAATCAATACTT+TGG 0.493804 7_1:+54466081 Msa1024710:CDS
GTGCCTTCGTAGGTGTAGAT+AGG 0.493896 7_1:-54466061 None:intergenic
ATTGCAAATGTCCAAGTGCA+TGG 0.496474 7_1:+54466556 Msa1024710:three_prime_UTR
TGAGCATTGCCAAGGATGAA+TGG 0.497287 7_1:-54462427 None:intergenic
GTCCCTGATGAGGACAGAAT+AGG 0.499925 7_1:+54463787 Msa1024710:CDS
TGAATCGTTTATGATGAGAT+TGG 0.500184 7_1:+54459392 Msa1024710:five_prime_UTR
TGGCCTGATCTTGCTCATCA+AGG 0.501785 7_1:+54466829 Msa1024710:three_prime_UTR
TGACAAATGCCGATGCTTTG+AGG 0.504013 7_1:-54467184 None:intergenic
ACCTTCAATTTGTTCAACCT+GGG 0.504728 7_1:-54459480 None:intergenic
TCTGAGTACAGATCCTGGTC+TGG 0.505952 7_1:+54466757 Msa1024710:three_prime_UTR
GCTTTGGAATAGCATGAAAT+GGG 0.508951 7_1:-54462190 None:intergenic
GTAGTGACGGTGGAGAAGTA+TGG 0.509574 7_1:+54459085 Msa1024710:five_prime_UTR
AAGGACAACCTCGGCTGTGG+TGG 0.509871 7_1:-54459114 None:intergenic
ACAGAAGCCAGAACGTGAAA+AGG 0.510595 7_1:+54459597 Msa1024710:five_prime_UTR
CTTGACAAAGTTAGAAGCCA+TGG 0.510762 7_1:-54467287 None:intergenic
TTTGACGAATCATCCATCCT+TGG 0.512769 7_1:+54467681 Msa1024710:three_prime_UTR
AAAAGGGAAAGGAAAACAGA+AGG 0.516110 7_1:+54466985 Msa1024710:three_prime_UTR
GGAAGGTGGTTGGATCCTTG+AGG 0.517870 7_1:+54462893 Msa1024710:CDS
TGAAGGGCTAAGATGTGTTA+AGG 0.518695 7_1:+54459651 Msa1024710:five_prime_UTR
GAAGAAGAAAATGGCTACGC+AGG 0.520123 7_1:-54459752 None:intergenic
AATCATTTCTCTGGGTTGCA+GGG 0.520150 7_1:-54467475 None:intergenic
AAAACAGGAGGTAATTTCAC+TGG 0.521829 7_1:+54459716 Msa1024710:five_prime_UTR
GAAATCAATACTTTGGTCAC+AGG 0.526713 7_1:+54466088 Msa1024710:CDS
GCTTTGGGGCGAGAATTGCT+TGG 0.528021 7_1:+54465251 Msa1024710:CDS
AAGTGTGAAAATGTTGATGA+TGG 0.528364 7_1:-54459778 None:intergenic
CTATGCAAGTTGTATGAAAG+TGG 0.528544 7_1:+54464848 Msa1024710:CDS
ACTTGCTGTTTCGCGTGTGA+TGG 0.529840 7_1:+54464402 Msa1024710:CDS
ATATAGTAGCTTCCTGATGA+AGG 0.530877 7_1:+54466796 Msa1024710:three_prime_UTR
TATATTCTGACAGATAAGAA+TGG 0.532779 7_1:+54460065 Msa1024710:intron
CAAGGAGGAAAAGTGGATGC+TGG 0.534250 7_1:-54460152 None:intergenic
TTTCCCAAGCTAGCATGACC+CGG 0.534822 7_1:-54464881 None:intergenic
GATTTCATACGTGCCTTCGT+AGG 0.539507 7_1:-54466071 None:intergenic
CAAACAAGAAACTAAGATGA+AGG 0.539935 7_1:-54467369 None:intergenic
ATTCCAAAGCTTGGTGAACT+GGG 0.540117 7_1:+54462203 Msa1024710:CDS
ATTATGTTGTGCGGCAACGG+CGG 0.540755 7_1:+54459176 Msa1024710:five_prime_UTR
GGTGGCAAATCAAAATATGA+AGG 0.541043 7_1:-54460095 None:intergenic
TACTCAAACACACTCTTCCA+TGG 0.545060 7_1:+54467270 Msa1024710:three_prime_UTR
AAAGAAAACAATAGCAGCAA+GGG 0.550237 7_1:-54459446 None:intergenic
GAGGGCCAAAAGCGGTGGAT+AGG 0.551086 7_1:+54462912 Msa1024710:CDS
CTTTGTAAATATCAGGTGGA+AGG 0.551566 7_1:+54462876 Msa1024710:intron
GCAGATATTGAAACCAGCTC+AGG 0.552851 7_1:-54467138 None:intergenic
AGCTGTCTGAGTACAGATCC+TGG 0.553248 7_1:+54466752 Msa1024710:three_prime_UTR
CACCGTCACTACTATTGTGT+CGG 0.554304 7_1:-54459074 None:intergenic
GCGGCGGCGCACCACGACGG+CGG 0.554311 7_1:+54459195 Msa1024710:five_prime_UTR
AAGGGTGAATGATGAATCAT+GGG 0.554836 7_1:-54467031 None:intergenic
TATTGCTGGTGGTACAATCA+AGG 0.554972 7_1:+54462226 Msa1024710:CDS
AATATCAGGTGGAAGGTGGT+TGG 0.556736 7_1:+54462883 Msa1024710:intron
AAGTTCATTCAAGGAAACAT+TGG 0.556868 7_1:-54467216 None:intergenic
AGGAAGGACAACCTCGGCTG+TGG 0.558619 7_1:-54459117 None:intergenic
CCTTCTTTCATTATGTTGTG+CGG 0.559209 7_1:+54459167 Msa1024710:five_prime_UTR
CCGCACAACATAATGAAAGA+AGG 0.559660 7_1:-54459167 None:intergenic
CTCAAACATTGAAAGTGAAG+AGG 0.559667 7_1:-54466435 None:intergenic
AGATGGAAAATAGAGAAGGA+AGG 0.561216 7_1:-54459133 None:intergenic
TTCAGTCATGGATTACCTTG+AGG 0.562403 7_1:+54465213 Msa1024710:intron
GAAAATGGCTACGCAGGGAG+AGG 0.562425 7_1:-54459746 None:intergenic
TGTGATTTAAAGGTACCTAA+AGG 0.564117 7_1:+54464721 Msa1024710:intron
TTGCAAATGTCCAAGTGCAT+GGG 0.567293 7_1:+54466557 Msa1024710:three_prime_UTR
GACACATTAAAATGAATGAA+GGG 0.570564 7_1:+54459635 Msa1024710:five_prime_UTR
TCAACAACAGCAACAAGAGT+TGG 0.573266 7_1:-54467630 None:intergenic
AAAATGGAGACATTGTTATG+AGG 0.575180 7_1:+54463755 Msa1024710:CDS
TTCCCAAGCTAGCATGACCC+GGG 0.576198 7_1:-54464880 None:intergenic
TTGGGGCGAGAATTGCTTGG+TGG 0.577790 7_1:+54465254 Msa1024710:CDS
CAAAGAAAACAATAGCAGCA+AGG 0.578173 7_1:-54459447 None:intergenic
GCATCTATGATATGTGTCAC+AGG 0.578609 7_1:+54464455 Msa1024710:CDS
AGGACAACCTCGGCTGTGGT+GGG 0.578819 7_1:-54459113 None:intergenic
TTATGAAAAGAGTGAAGGAA+TGG 0.579551 7_1:-54459008 None:intergenic
ACTCAATGATGAATTGGCTA+AGG 0.580765 7_1:-54467339 None:intergenic
TGTCAGATGATCAGAGGCAG+AGG 0.581262 7_1:-54467403 None:intergenic
TGTTCAACCTGGGAAAACTC+AGG 0.581679 7_1:-54459470 None:intergenic
GTAAATTGAAGCGATTGGGT+TGG 0.582088 7_1:-54459812 None:intergenic
TGTAAATATCAGGTGGAAGG+TGG 0.582236 7_1:+54462879 Msa1024710:intron
ACAAGATGAAATGTTAACCC+TGG 0.585463 7_1:+54467446 Msa1024710:three_prime_UTR
ATTTGTTGGTTATCTTCGCA+AGG 0.585691 7_1:+54462952 Msa1024710:CDS
TAACTTAGATGCATAAGATG+TGG 0.587699 7_1:-54466608 None:intergenic
CTGATGAAGGATGCATTGCA+TGG 0.588534 7_1:+54466809 Msa1024710:three_prime_UTR
GCATTTGAACAAGTTTCTGT+TGG 0.588644 7_1:-54464787 None:intergenic
TAGTTCATTCATGGCTGAAG+AGG 0.591030 7_1:-54467249 None:intergenic
GTTACCACAAGGAGGAAAAG+TGG 0.591085 7_1:-54460159 None:intergenic
ACCTATAGTGAGCATTGCCA+AGG 0.591220 7_1:-54462435 None:intergenic
ATAATAAGTAATTAAATCAG+AGG 0.592238 7_1:+54466728 Msa1024710:three_prime_UTR
CCTGATGAGGACAGAATAGG+AGG 0.592302 7_1:+54463790 Msa1024710:CDS
CAAGAGAAACAGCTGCTTTG+GGG 0.597481 7_1:+54465237 Msa1024710:CDS
TGTCTCAGTCCTCAAAGCAT+CGG 0.597743 7_1:+54467175 Msa1024710:three_prime_UTR
AGGAAGATGGAAAATAGAGA+AGG 0.600541 7_1:-54459137 None:intergenic
CTCCTATTCTGTCCTCATCA+GGG 0.601869 7_1:-54463789 None:intergenic
CCACAAAGTATAGCATTGTG+TGG 0.603070 7_1:+54462535 Msa1024710:intron
AAAAGAGTGACAGCCAGACC+AGG 0.605091 7_1:-54466770 None:intergenic
TCCTTGAGGGCCAAAAGCGG+TGG 0.605182 7_1:+54462907 Msa1024710:CDS
GAAAGTGGTAAAATGACCCC+GGG 0.606752 7_1:+54464863 Msa1024710:CDS
TGAAAGTGGTAAAATGACCC+CGG 0.608059 7_1:+54464862 Msa1024710:CDS
CGATGACTTGTTGAAACCGG+AGG 0.608202 7_1:+54461616 Msa1024710:CDS
GGGTCATGCTAGCTTGGGAA+AGG 0.608692 7_1:+54464883 Msa1024710:CDS
GCATTTGATGAATTTCTCCA+AGG 0.609829 7_1:-54467698 None:intergenic
AGGATTTGTCAGATGATCAG+AGG 0.610673 7_1:-54467409 None:intergenic
TCCATAGTCAGGTTCAGTCA+AGG 0.611700 7_1:-54462705 None:intergenic
AGGAGGTAATTTCACTGGAG+AGG 0.615543 7_1:+54459721 Msa1024710:five_prime_UTR
CACCGACACAATAGTAGTGA+CGG 0.615779 7_1:+54459072 Msa1024710:five_prime_UTR
TCACTGAACCTTAGTTGCTG+TGG 0.618180 7_1:-54462750 None:intergenic
TTGTGGATTGGAACGAGTCA+TGG 0.618797 7_1:-54459872 None:intergenic
GGGTTGCAGGGTTTAAACCA+GGG 0.620087 7_1:-54467463 None:intergenic
CTAACTTTGTCAAGAACTGG+TGG 0.620925 7_1:+54467296 Msa1024710:three_prime_UTR
GTTCATTCTTCACACAGAGA+GGG 0.622372 7_1:-54466489 None:intergenic
TGGGTTTATGAAAAGAGTGA+AGG 0.624696 7_1:-54459013 None:intergenic
AGTTCATTCATGGCTGAAGA+GGG 0.624799 7_1:-54467248 None:intergenic
GCAAAAGTATCTACCGTCGT+TGG 0.625186 7_1:+54462573 Msa1024710:CDS
AGTGTGAAAATGTTGATGAT+GGG 0.625650 7_1:-54459777 None:intergenic
CTTCCAGTTACGGAAAGACC+AGG 0.628064 7_1:-54462344 None:intergenic
AAGAAGAAAATGGCTACGCA+GGG 0.628538 7_1:-54459751 None:intergenic
GGTGGCACCCACCACAGCCG+AGG 0.629713 7_1:+54459106 Msa1024710:five_prime_UTR
GGTTCATTCTTCACACAGAG+AGG 0.632083 7_1:-54466490 None:intergenic
TTTATACTTTCTTCAACACA+AGG 0.633190 7_1:-54466511 None:intergenic
AATCATGTAATCCGCCGTCG+TGG 0.639781 7_1:-54459206 None:intergenic
GGTGAACTGGGTATTGCTGG+TGG 0.643007 7_1:+54462215 Msa1024710:CDS
ATGCTCAAAGGGAAAACCAA+GGG 0.646663 7_1:-54467049 None:intergenic
ATTTCACATGAGAAAACAGG+AGG 0.647140 7_1:+54459704 Msa1024710:five_prime_UTR
ATTGGAACGAGTCATGGTGG+TGG 0.649515 7_1:-54459866 None:intergenic
TTTAAAGGTACCTAAAGGAG+AGG 0.649674 7_1:+54464726 Msa1024710:intron
GCAAGAGAAACATCAAGTGG+TGG 0.653933 7_1:-54460113 None:intergenic
CACAAAGTATAGCATTGTGT+GGG 0.656597 7_1:+54462536 Msa1024710:intron
GTGGATGCTGGAGTTGCTTG+AGG 0.664939 7_1:-54460140 None:intergenic
GGATCCTTGAGGGCCAAAAG+CGG 0.668490 7_1:+54462904 Msa1024710:CDS
GAACCTATCTACACCTACGA+AGG 0.674168 7_1:+54466058 Msa1024710:CDS
TAGAGAAGGAAGGACAACCT+CGG 0.678691 7_1:-54459123 None:intergenic
TCCCAAGCTAGCATGACCCG+GGG 0.686858 7_1:-54464879 None:intergenic
GTGACGGTGGAGAAGTATGG+TGG 0.691827 7_1:+54459088 Msa1024710:five_prime_UTR
CGACACAATAGTAGTGACGG+TGG 0.693692 7_1:+54459075 Msa1024710:five_prime_UTR
AATGCAAGAGAAACATCAAG+TGG 0.699349 7_1:-54460116 None:intergenic
GATGCTCAAAGGGAAAACCA+AGG 0.701995 7_1:-54467050 None:intergenic
TCAAGGTTGTTACCACAAGG+AGG 0.702815 7_1:-54460167 None:intergenic
ATGACTCGTTCCAATCCACA+AGG 0.715801 7_1:+54459874 Msa1024710:CDS
TCCAATGAACTGAACCATGG+TGG 0.722158 7_1:+54467500 Msa1024710:three_prime_UTR
TGGATTGGAACGAGTCATGG+TGG 0.726458 7_1:-54459869 None:intergenic
TAAGGTACATGAGAGTATGG+CGG 0.739421 7_1:-54467321 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAAAAAAAATCTTAAT+TGG + chr7_1:54459308-54459327 Msa1024710:five_prime_UTR 10.0%
!!! TCTTTTTTTTTTTTTTTGAA+GGG - chr7_1:54460241-54460260 None:intergenic 10.0%
!!! ATCTTTTTTTTTTTTTTTGA+AGG - chr7_1:54460242-54460261 None:intergenic 10.0%
!! AATGATGTATATAAATAAAA+GGG - chr7_1:54460758-54460777 None:intergenic 10.0%
!! AAATGATGTATATAAATAAA+AGG - chr7_1:54460759-54460778 None:intergenic 10.0%
!!! TTATATATAAGTGTTATTTT+TGG + chr7_1:54460952-54460971 Msa1024710:intron 10.0%
!! AATATTTATCTTTGTTAAAA+TGG + chr7_1:54462458-54462477 Msa1024710:intron 10.0%
!! AACAAAATAAACATTAAATA+AGG - chr7_1:54465330-54465349 None:intergenic 10.0%
!! ATTATATTATTGTATTCTAT+TGG + chr7_1:54466198-54466217 Msa1024710:three_prime_UTR 10.0%
!! GAATGAAAATAATTAAATCA+AGG - chr7_1:54460187-54460206 None:intergenic 15.0%
!!! TATTTTTCAATTAAGATTAC+AGG - chr7_1:54460533-54460552 None:intergenic 15.0%
!!! TTATATACATCATTTTTAAG+AGG + chr7_1:54460564-54460583 Msa1024710:intron 15.0%
!!! TATATACATCATTTTTAAGA+GGG + chr7_1:54460565-54460584 Msa1024710:intron 15.0%
!! TTTAAAAAAGCAAAAAGAAA+AGG - chr7_1:54461714-54461733 None:intergenic 15.0%
!!! ACAAATTTTATATTTACTAG+TGG - chr7_1:54461767-54461786 None:intergenic 15.0%
!!! TTGTATATACATAAGTTTTT+GGG + chr7_1:54461870-54461889 Msa1024710:intron 15.0%
!! ACATATATAAATATACAATC+AGG - chr7_1:54461929-54461948 None:intergenic 15.0%
!! ATCAAAGATAATAAAATATC+AGG - chr7_1:54462512-54462531 None:intergenic 15.0%
!!! TTATTTTTTTACCAAATCTA+TGG + chr7_1:54463215-54463234 Msa1024710:intron 15.0%
!! TGTACTAATAATGAATAAAA+TGG + chr7_1:54463383-54463402 Msa1024710:intron 15.0%
!! AAAAAAATCTAGTATTCTAA+GGG - chr7_1:54463553-54463572 None:intergenic 15.0%
!! AACATTTGTCATTAAATAAA+AGG + chr7_1:54464643-54464662 Msa1024710:intron 15.0%
!! TAAACATTAAATAAGGAATT+AGG - chr7_1:54465323-54465342 None:intergenic 15.0%
!!! ATTTTAATAAATTCCATTCT+TGG - chr7_1:54465453-54465472 None:intergenic 15.0%
!!! TTTTGTAGAATACAATTAAA+TGG + chr7_1:54465684-54465703 Msa1024710:intron 15.0%
!! AAAAATGAAATACAAAATTG+TGG - chr7_1:54465939-54465958 None:intergenic 15.0%
!!! TTGAAAATGTGATTTTTTTA+AGG + chr7_1:54466583-54466602 Msa1024710:three_prime_UTR 15.0%
!! AAGAAAAAAAAAATCTACTA+AGG + chr7_1:54466667-54466686 Msa1024710:three_prime_UTR 15.0%
!! ATAATAAGTAATTAAATCAG+AGG + chr7_1:54466728-54466747 Msa1024710:three_prime_UTR 15.0%
!!! AAGAAGAATAATATTTTGAT+TGG + chr7_1:54467529-54467548 Msa1024710:three_prime_UTR 15.0%
!! TTCAATTCAAATCATTTGAA+TGG + chr7_1:54459265-54459284 Msa1024710:five_prime_UTR 20.0%
!! AATTGTTGAATTTGAGTATT+TGG + chr7_1:54459417-54459436 Msa1024710:five_prime_UTR 20.0%
!! ATTTACAACTCTAACTTAAT+TGG + chr7_1:54459510-54459529 Msa1024710:five_prime_UTR 20.0%
!! AAAAAAAAACAAAAGATCAC+AGG - chr7_1:54459981-54460000 None:intergenic 20.0%
!! AATATACGAAATCAAAACTT+TGG - chr7_1:54460051-54460070 None:intergenic 20.0%
!! TAGATGTACAGAATATTAAT+AGG - chr7_1:54460309-54460328 None:intergenic 20.0%
!! TATTAATATTCTGTACATCT+AGG + chr7_1:54460308-54460327 Msa1024710:intron 20.0%
!! ATGAGTAAATAACAGTTAAT+GGG - chr7_1:54460459-54460478 None:intergenic 20.0%
!!! ATATACATCATTTTTAAGAG+GGG + chr7_1:54460566-54460585 Msa1024710:intron 20.0%
!!! CTAAATGAAGCTTTAATTTT+CGG - chr7_1:54461388-54461407 None:intergenic 20.0%
!! TTCAATGTAAATATCTTTGT+TGG + chr7_1:54461737-54461756 Msa1024710:intron 20.0%
!!! AATTTTATATTTACTAGTGG+AGG - chr7_1:54461764-54461783 None:intergenic 20.0%
!! TGTTTCAAAAAATATCTGTT+TGG + chr7_1:54461784-54461803 Msa1024710:intron 20.0%
!! AAACTTATGTATATACAACT+TGG - chr7_1:54461868-54461887 None:intergenic 20.0%
!!! GTTGTATATACATAAGTTTT+TGG + chr7_1:54461869-54461888 Msa1024710:intron 20.0%
!! TCAATTTGATTACATCAAAT+TGG - chr7_1:54461973-54461992 None:intergenic 20.0%
!! ATGTAATCAAATTGAAATGA+AGG + chr7_1:54461978-54461997 Msa1024710:intron 20.0%
!! TGTAATCAAATTGAAATGAA+GGG + chr7_1:54461979-54461998 Msa1024710:intron 20.0%
!! GTTTCTAATCTATTCATTAT+TGG + chr7_1:54462005-54462024 Msa1024710:intron 20.0%
!!! TTTTGATGTTTGTATCTTTT+TGG + chr7_1:54462056-54462075 Msa1024710:intron 20.0%
!! TTGATTAGGACAAAATATAA+GGG - chr7_1:54462266-54462285 None:intergenic 20.0%
!! ATAAGTCAAAAAGAATTGAA+TGG - chr7_1:54462786-54462805 None:intergenic 20.0%
!!! CTCATTCTATGTTTTTTTTT+GGG - chr7_1:54463160-54463179 None:intergenic 20.0%
!!! AACAAATCATGAAACATTTT+AGG + chr7_1:54463324-54463343 Msa1024710:intron 20.0%
!! CAAAAAAATCTAGTATTCTA+AGG - chr7_1:54463554-54463573 None:intergenic 20.0%
!! TTTCAGTTATATCGTAAAAA+AGG + chr7_1:54463675-54463694 Msa1024710:intron 20.0%
!! ACAAAAATAGAGAACAAAAT+TGG + chr7_1:54463718-54463737 Msa1024710:CDS 20.0%
!! TAAATATTGTTGTCAAATAG+AGG + chr7_1:54464916-54464935 Msa1024710:intron 20.0%
!!! TACAAAGTGTTATTAAACTA+CGG + chr7_1:54465001-54465020 Msa1024710:intron 20.0%
!!! TTGTCATATCTTATTTTGTA+AGG - chr7_1:54465095-54465114 None:intergenic 20.0%
!!! AACCTAGTTTTAAAAATTCT+AGG + chr7_1:54465113-54465132 Msa1024710:intron 20.0%
!!! AACCTAGAATTTTTAAAACT+AGG - chr7_1:54465118-54465137 None:intergenic 20.0%
!! AATTTCACTTAATTCAACTA+TGG + chr7_1:54465159-54465178 Msa1024710:intron 20.0%
!!! TTTCAATATTTTTTCAGTCA+TGG + chr7_1:54465201-54465220 Msa1024710:intron 20.0%
!! AACTGATCTATAGATTAAAT+TGG + chr7_1:54465358-54465377 Msa1024710:intron 20.0%
!! ATGGAATTTATTAAAATGAG+TGG + chr7_1:54465456-54465475 Msa1024710:intron 20.0%
!! AATTTATTAAAATGAGTGGA+TGG + chr7_1:54465460-54465479 Msa1024710:intron 20.0%
!! AGTTATGATAACAATAAATG+AGG + chr7_1:54465534-54465553 Msa1024710:intron 20.0%
!!! ATAAATGAGGTTTTTAGATA+AGG + chr7_1:54465547-54465566 Msa1024710:intron 20.0%
!! GACATATTGATATTTGATAT+TGG - chr7_1:54465823-54465842 None:intergenic 20.0%
!! TAATTTACAAGTGATCAAAT+TGG + chr7_1:54465879-54465898 Msa1024710:intron 20.0%
!!! TTGGTAGTCTATTATTAAAT+TGG + chr7_1:54465898-54465917 Msa1024710:intron 20.0%
!!! TATTTCATTTTTGTTCACAT+TGG + chr7_1:54465947-54465966 Msa1024710:intron 20.0%
!!! ATTTCATTTTTGTTCACATT+GGG + chr7_1:54465948-54465967 Msa1024710:intron 20.0%
!! AAAAAATGAAGGAAAGAAAA+AGG + chr7_1:54466968-54466987 Msa1024710:three_prime_UTR 20.0%
!! AAAAATGAAGGAAAGAAAAA+GGG + chr7_1:54466969-54466988 Msa1024710:three_prime_UTR 20.0%
!! TCTTGTAAACAAAACTTTAA+AGG - chr7_1:54467432-54467451 None:intergenic 20.0%
!! TAATGAAAGAAGGATTTTGA+AGG - chr7_1:54459160-54459179 None:intergenic 25.0%
!! AAGAATTGTATGTGTTGTTA+TGG + chr7_1:54459545-54459564 Msa1024710:five_prime_UTR 25.0%
! TGACACATTAAAATGAATGA+AGG + chr7_1:54459634-54459653 Msa1024710:five_prime_UTR 25.0%
! GACACATTAAAATGAATGAA+GGG + chr7_1:54459635-54459654 Msa1024710:five_prime_UTR 25.0%
! ATTATTTCACATGAGAAAAC+AGG + chr7_1:54459701-54459720 Msa1024710:five_prime_UTR 25.0%
! TATATTCTGACAGATAAGAA+TGG + chr7_1:54460065-54460084 Msa1024710:intron 25.0%
! TAATAGGCTGGAAATTAAAT+TGG - chr7_1:54460293-54460312 None:intergenic 25.0%
! CATGAGTAAATAACAGTTAA+TGG - chr7_1:54460460-54460479 None:intergenic 25.0%
! TTGAATGAATTTGTAGTGTT+TGG - chr7_1:54460826-54460845 None:intergenic 25.0%
!! TTTTATAAGCGAACTTATAG+CGG - chr7_1:54460865-54460884 None:intergenic 25.0%
!! TTTGCTATAAATGCTTAGTT+AGG - chr7_1:54460913-54460932 None:intergenic 25.0%
! TATACATAAACCAAGCAATT+GGG - chr7_1:54461135-54461154 None:intergenic 25.0%
! ATCTTATTATGTGCTTAACT+TGG + chr7_1:54461492-54461511 Msa1024710:intron 25.0%
! TTTGTATTTGTGATGATTGT+TGG + chr7_1:54461565-54461584 Msa1024710:intron 25.0%
! GTAATCAAATTGAAATGAAG+GGG + chr7_1:54461980-54461999 Msa1024710:intron 25.0%
! TAATCAAATTGAAATGAAGG+GGG + chr7_1:54461981-54462000 Msa1024710:intron 25.0%
! CTTGATTAGGACAAAATATA+AGG - chr7_1:54462267-54462286 None:intergenic 25.0%
!! AAGTTGTTCAACTTTCATTT+TGG + chr7_1:54462403-54462422 Msa1024710:CDS 25.0%
!!! AAAGAGGTTGTTTCTTTATT+AGG + chr7_1:54462682-54462701 Msa1024710:intron 25.0%
! ACCTCAACAAATCAAATAAA+TGG + chr7_1:54462978-54462997 Msa1024710:CDS 25.0%
! CCTCAACAAATCAAATAAAT+GGG + chr7_1:54462979-54462998 Msa1024710:CDS 25.0%
! TATAAGGATTTAACAATGAC+AGG - chr7_1:54463030-54463049 None:intergenic 25.0%
! TATGGGCATGTTTATATATA+AGG - chr7_1:54463046-54463065 None:intergenic 25.0%
!!! GCTCATTCTATGTTTTTTTT+TGG - chr7_1:54463161-54463180 None:intergenic 25.0%
! TCATATTAACGAATATAGCT+TGG + chr7_1:54463298-54463317 Msa1024710:intron 25.0%
! CATATTAACGAATATAGCTT+GGG + chr7_1:54463299-54463318 Msa1024710:intron 25.0%
! GTGATTATTTGAATAATCAG+CGG - chr7_1:54463874-54463893 None:intergenic 25.0%
! GGAGAGAAGAAAAAAATATT+AGG - chr7_1:54464238-54464257 None:intergenic 25.0%
! TGGAAATTAGATACATTGTT+TGG + chr7_1:54464265-54464284 Msa1024710:intron 25.0%
!!! TGTTTTTGCTATCTCTAAAT+AGG + chr7_1:54464378-54464397 Msa1024710:intron 25.0%
!!! TATCTTATTTTGTAAGGACA+GGG - chr7_1:54465089-54465108 None:intergenic 25.0%
!!! ATATCTTATTTTGTAAGGAC+AGG - chr7_1:54465090-54465109 None:intergenic 25.0%
!! CTATATTTGTCTAGAACTAA+GGG - chr7_1:54465502-54465521 None:intergenic 25.0%
!! TCTATATTTGTCTAGAACTA+AGG - chr7_1:54465503-54465522 None:intergenic 25.0%
! AAAAATCATACGACACAATT+GGG - chr7_1:54465586-54465605 None:intergenic 25.0%
! TAAAAATCATACGACACAAT+TGG - chr7_1:54465587-54465606 None:intergenic 25.0%
! TAAATGGAAAAATTACACTG+TGG + chr7_1:54465700-54465719 Msa1024710:intron 25.0%
! AAGGTTAATTGTTCCAATTA+TGG + chr7_1:54465971-54465990 Msa1024710:intron 25.0%
! GAAAACAAAATGTCCATAAT+TGG - chr7_1:54465987-54466006 None:intergenic 25.0%
!! TTTATTGAATGCTTCTGTTT+TGG - chr7_1:54466249-54466268 None:intergenic 25.0%
! TTTATACTTTCTTCAACACA+AGG - chr7_1:54466514-54466533 None:intergenic 25.0%
!!! TTTGAGTTGTGTAATACATA+GGG - chr7_1:54466917-54466936 None:intergenic 25.0%
!! ATGAATCATGGGAAATTTTA+AGG - chr7_1:54467023-54467042 None:intergenic 25.0%
! ATTGGAAAAATCATTTCTCT+GGG - chr7_1:54467486-54467505 None:intergenic 25.0%
! GTCATCTATGTATTAATCTT+AGG + chr7_1:54467737-54467756 Msa1024710:three_prime_UTR 25.0%
TTATGAAAAGAGTGAAGGAA+TGG - chr7_1:54459011-54459030 None:intergenic 30.0%
TGAATCGTTTATGATGAGAT+TGG + chr7_1:54459392-54459411 Msa1024710:five_prime_UTR 30.0%
AAAGAAAACAATAGCAGCAA+GGG - chr7_1:54459449-54459468 None:intergenic 30.0%
!! TGTGTTAAGGTGTCATTAAA+AGG + chr7_1:54459664-54459683 Msa1024710:five_prime_UTR 30.0%
!! AGTGTGAAAATGTTGATGAT+GGG - chr7_1:54459780-54459799 None:intergenic 30.0%
! AAGTGTGAAAATGTTGATGA+TGG - chr7_1:54459781-54459800 None:intergenic 30.0%
CCATAACAGAAAATGAAAGA+AGG - chr7_1:54459930-54459949 None:intergenic 30.0%
! CCTTCTTTCATTTTCTGTTA+TGG + chr7_1:54459927-54459946 Msa1024710:intron 30.0%
TGTACAGAATATTAATAGGC+TGG - chr7_1:54460305-54460324 None:intergenic 30.0%
! ATTAAGTTGTTTATCCAACC+TGG - chr7_1:54460348-54460367 None:intergenic 30.0%
!!! TTACCCTATTTTTACACAAG+AGG - chr7_1:54460659-54460678 None:intergenic 30.0%
TCTTGTGTAAAAATAGGGTA+AGG + chr7_1:54460658-54460677 Msa1024710:intron 30.0%
ATATAAATAAAAGGGCAACC+CGG - chr7_1:54460750-54460769 None:intergenic 30.0%
GTAGTGTTTGGTAAAATTAG+CGG - chr7_1:54460814-54460833 None:intergenic 30.0%
!!! ATTTTTGGTTGTTATCCCTT+CGG + chr7_1:54460967-54460986 Msa1024710:intron 30.0%
GTATACATAAACCAAGCAAT+TGG - chr7_1:54461136-54461155 None:intergenic 30.0%
! TAGAGTATCAACTAACCATT+GGG - chr7_1:54461361-54461380 None:intergenic 30.0%
! TTAGAGTATCAACTAACCAT+TGG - chr7_1:54461362-54461381 None:intergenic 30.0%
AAATATGAGCAAGATATGCT+TGG + chr7_1:54461521-54461540 Msa1024710:intron 30.0%
AATATGAGCAAGATATGCTT+GGG + chr7_1:54461522-54461541 Msa1024710:intron 30.0%
! TCTGTTTGGACATATTGATT+TGG + chr7_1:54461798-54461817 Msa1024710:intron 30.0%
TATACAACTTGGTTCATGAA+GGG - chr7_1:54461857-54461876 None:intergenic 30.0%
ATATACAACTTGGTTCATGA+AGG - chr7_1:54461858-54461877 None:intergenic 30.0%
AATCAAATTGAAATGAAGGG+GGG + chr7_1:54461982-54462001 Msa1024710:intron 30.0%
! AAAAGCATGAGATCAAGTTT+AGG - chr7_1:54462144-54462163 None:intergenic 30.0%
!! TCATGCTTTTTAACAGCATT+GGG + chr7_1:54462154-54462173 Msa1024710:intron 30.0%
GAACTTTCATAGACTTGATT+AGG - chr7_1:54462280-54462299 None:intergenic 30.0%
AGCTAAAAACTATAGCATGT+TGG + chr7_1:54462599-54462618 Msa1024710:CDS 30.0%
GCTAAAAACTATAGCATGTT+GGG + chr7_1:54462600-54462619 Msa1024710:CDS 30.0%
ACACAAATCTTCAAAATCCA+AGG - chr7_1:54462637-54462656 None:intergenic 30.0%
ATAAAGAAACAACCTCTTTG+AGG - chr7_1:54462681-54462700 None:intergenic 30.0%
TGCTTTGCTTTGTAAATATC+AGG + chr7_1:54462869-54462888 Msa1024710:intron 30.0%
TTTGCTTTGTAAATATCAGG+TGG + chr7_1:54462872-54462891 Msa1024710:intron 30.0%
!! CCCATTTATTTGATTTGTTG+AGG - chr7_1:54462982-54463001 None:intergenic 30.0%
TATATAAACATGCCCATAAG+TGG + chr7_1:54463048-54463067 Msa1024710:intron 30.0%
ATATAAACATGCCCATAAGT+GGG + chr7_1:54463049-54463068 Msa1024710:intron 30.0%
AATGCTTATTACCCACTTAT+GGG - chr7_1:54463063-54463082 None:intergenic 30.0%
!!! GTGGAAATAATGTGTCATTT+TGG + chr7_1:54463467-54463486 Msa1024710:intron 30.0%
! ATTTTTGTGACAGTTAAACC+AGG - chr7_1:54463706-54463725 None:intergenic 30.0%
AAAATGGAGACATTGTTATG+AGG + chr7_1:54463755-54463774 Msa1024710:CDS 30.0%
!! TTCTTTTCAGGATACTAACA+AGG + chr7_1:54463819-54463838 Msa1024710:CDS 30.0%
TAAAAGAGGATACATGTACT+AGG - chr7_1:54463982-54464001 None:intergenic 30.0%
!! GTTTACCTGTTTTTCCTTTA+GGG + chr7_1:54464161-54464180 Msa1024710:intron 30.0%
!! TTTACCTGTTTTTCCTTTAG+GGG + chr7_1:54464162-54464181 Msa1024710:intron 30.0%
GTATCTAATTTCCAATGCTT+CGG - chr7_1:54464259-54464278 None:intergenic 30.0%
CAACCTATTGGTATATCAAT+GGG + chr7_1:54464433-54464452 Msa1024710:CDS 30.0%
CTGAACTGTATGTGATTTAA+AGG + chr7_1:54464711-54464730 Msa1024710:intron 30.0%
!! TGTGATTTAAAGGTACCTAA+AGG + chr7_1:54464721-54464740 Msa1024710:intron 30.0%
GTGATTACAATGTTGTCAAA+TGG - chr7_1:54465067-54465086 None:intergenic 30.0%
TCACTTAATTCAACTATGGT+AGG + chr7_1:54465163-54465182 Msa1024710:intron 30.0%
!!! AATTTTGGCTGATTTTCTAG+TGG + chr7_1:54465283-54465302 Msa1024710:CDS 30.0%
GTTATCATAACTTTCATGCA+GGG - chr7_1:54465526-54465545 None:intergenic 30.0%
TGTTATCATAACTTTCATGC+AGG - chr7_1:54465527-54465546 None:intergenic 30.0%
!! ATGAGGTTTTTAGATAAGGA+TGG + chr7_1:54465551-54465570 Msa1024710:intron 30.0%
TTTAGATAAGGATGGAAATG+TGG + chr7_1:54465559-54465578 Msa1024710:intron 30.0%
TTAGATAAGGATGGAAATGT+GGG + chr7_1:54465560-54465579 Msa1024710:intron 30.0%
TAAATCAGACACATTGATAC+TGG - chr7_1:54465857-54465876 None:intergenic 30.0%
! TTTTTCTTCTCTAATTGTGC+AGG + chr7_1:54466021-54466040 Msa1024710:intron 30.0%
CACGTATGAAATCAATACTT+TGG + chr7_1:54466081-54466100 Msa1024710:CDS 30.0%
! ATCTTGTCTTTTCCTTTTGT+TGG + chr7_1:54466360-54466379 Msa1024710:three_prime_UTR 30.0%
GGTTATATAAAGTGGAAAAC+AGG - chr7_1:54466417-54466436 None:intergenic 30.0%
AGTGAAGAGGTTATATAAAG+TGG - chr7_1:54466425-54466444 None:intergenic 30.0%
! AATGTTTGAGATTTCTGCTT+TGG + chr7_1:54466448-54466467 Msa1024710:three_prime_UTR 30.0%
TAACTTAGATGCATAAGATG+TGG - chr7_1:54466611-54466630 None:intergenic 30.0%
TCATCAAGGAAACATCATTA+GGG + chr7_1:54466843-54466862 Msa1024710:three_prime_UTR 30.0%
!! GTTTGAGTTGTGTAATACAT+AGG - chr7_1:54466918-54466937 None:intergenic 30.0%
!! AATCATGGGAAATTTTAAGG+TGG - chr7_1:54467020-54467039 None:intergenic 30.0%
! TTTTGATAAGGATGCTCAAA+GGG - chr7_1:54467063-54467082 None:intergenic 30.0%
!! TAGGTCTTTAGGTTTTGATA+AGG - chr7_1:54467075-54467094 None:intergenic 30.0%
AAGTTCATTCAAGGAAACAT+TGG - chr7_1:54467219-54467238 None:intergenic 30.0%
AATGTTTCCTTGAATGAACT+TGG + chr7_1:54467218-54467237 Msa1024710:three_prime_UTR 30.0%
CAAACAAGAAACTAAGATGA+AGG - chr7_1:54467372-54467391 None:intergenic 30.0%
CATTGGAAAAATCATTTCTC+TGG - chr7_1:54467487-54467506 None:intergenic 30.0%
TGGGTTTATGAAAAGAGTGA+AGG - chr7_1:54459016-54459035 None:intergenic 35.0%
AGATGGAAAATAGAGAAGGA+AGG - chr7_1:54459136-54459155 None:intergenic 35.0%
AGGAAGATGGAAAATAGAGA+AGG - chr7_1:54459140-54459159 None:intergenic 35.0%
!! AGAAGGATTTTGAAGGAAGA+TGG - chr7_1:54459153-54459172 None:intergenic 35.0%
CCTTCTTTCATTATGTTGTG+CGG + chr7_1:54459167-54459186 Msa1024710:five_prime_UTR 35.0%
CAAAGAAAACAATAGCAGCA+AGG - chr7_1:54459450-54459469 None:intergenic 35.0%
! ACCTTCAATTTGTTCAACCT+GGG - chr7_1:54459483-54459502 None:intergenic 35.0%
! AACCTTCAATTTGTTCAACC+TGG - chr7_1:54459484-54459503 None:intergenic 35.0%
! TTTTCTTCCTTTTCACGTTC+TGG - chr7_1:54459607-54459626 None:intergenic 35.0%
ATTTCACATGAGAAAACAGG+AGG + chr7_1:54459704-54459723 Msa1024710:five_prime_UTR 35.0%
AAAACAGGAGGTAATTTCAC+TGG + chr7_1:54459716-54459735 Msa1024710:five_prime_UTR 35.0%
TGATGGGAAGAAGAAGAAAA+TGG - chr7_1:54459764-54459783 None:intergenic 35.0%
GAAGGTAAATTGAAGCGATT+GGG - chr7_1:54459819-54459838 None:intergenic 35.0%
AAGAAGAAGAAGAAGAAGGA+AGG - chr7_1:54459837-54459856 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG - chr7_1:54459841-54459860 None:intergenic 35.0%
GGTGGCAAATCAAAATATGA+AGG - chr7_1:54460098-54460117 None:intergenic 35.0%
AATGCAAGAGAAACATCAAG+TGG - chr7_1:54460119-54460138 None:intergenic 35.0%
AAATCAAGGTTGTTACCACA+AGG - chr7_1:54460173-54460192 None:intergenic 35.0%
CGTTCACAGCAAAAAGATTT+AGG + chr7_1:54460372-54460391 Msa1024710:intron 35.0%
!! ATTTTTAAGAGGGGTAACCT+TGG + chr7_1:54460575-54460594 Msa1024710:intron 35.0%
AAAGTTGTCATGTGACTAGA+AGG + chr7_1:54460608-54460627 Msa1024710:intron 35.0%
ACAGCCTCTTGTGTAAAAAT+AGG + chr7_1:54460652-54460671 Msa1024710:intron 35.0%
CAGCCTCTTGTGTAAAAATA+GGG + chr7_1:54460653-54460672 Msa1024710:intron 35.0%
TGTACAATACACCAAATGGT+GGG + chr7_1:54460684-54460703 Msa1024710:intron 35.0%
GTCAAGAGGCAATTAAAATC+TGG + chr7_1:54461028-54461047 Msa1024710:intron 35.0%
! TTTGTTGGTGGAACAATTCT+TGG - chr7_1:54461054-54461073 None:intergenic 35.0%
!! AGAACCTGAGTTTGATTTGT+TGG - chr7_1:54461069-54461088 None:intergenic 35.0%
CATGTGAGACTATTTAACAG+AGG - chr7_1:54461294-54461313 None:intergenic 35.0%
ATACATTAGCCAATCCAAAC+AGG + chr7_1:54461335-54461354 Msa1024710:intron 35.0%
!! ATTCGATGACTTGTTGAAAC+CGG + chr7_1:54461613-54461632 Msa1024710:CDS 35.0%
CAAGCACATTGACAAATTTG+AGG - chr7_1:54461825-54461844 None:intergenic 35.0%
ATCAAATTGAAATGAAGGGG+GGG + chr7_1:54461983-54462002 Msa1024710:intron 35.0%
!! CTCATGCTTTTTAACAGCAT+TGG + chr7_1:54462153-54462172 Msa1024710:intron 35.0%
!! GCTTTGGAATAGCATGAAAT+GGG - chr7_1:54462193-54462212 None:intergenic 35.0%
!! AGCTTTGGAATAGCATGAAA+TGG - chr7_1:54462194-54462213 None:intergenic 35.0%
TTTCATGCTATTCCAAAGCT+TGG + chr7_1:54462194-54462213 Msa1024710:CDS 35.0%
! CTAGTTGTGATTGATTCTCA+GGG + chr7_1:54462311-54462330 Msa1024710:intron 35.0%
CACAAAGTATAGCATTGTGT+GGG + chr7_1:54462536-54462555 Msa1024710:intron 35.0%
CTTTGTAAATATCAGGTGGA+AGG + chr7_1:54462876-54462895 Msa1024710:intron 35.0%
! ATTTGTTGGTTATCTTCGCA+AGG + chr7_1:54462952-54462971 Msa1024710:CDS 35.0%
GAATGCTTATTACCCACTTA+TGG - chr7_1:54463064-54463083 None:intergenic 35.0%
!! AAGCATTCTAGCTTGTCTAA+AGG + chr7_1:54463076-54463095 Msa1024710:intron 35.0%
! CATGAAATTCCACGGATTTT+CGG - chr7_1:54463112-54463131 None:intergenic 35.0%
AGCGAATGAATATGAACGTT+TGG + chr7_1:54463178-54463197 Msa1024710:intron 35.0%
!!! GAAACATTTTAGGACCTGTT+TGG + chr7_1:54463334-54463353 Msa1024710:intron 35.0%
! TTGTTTTCATCGTTTCCTGT+TGG + chr7_1:54463421-54463440 Msa1024710:intron 35.0%
TTATTTCCACCTTCTTTCGT+AGG - chr7_1:54463457-54463476 None:intergenic 35.0%
GAGTAATTATGATGTGAAGC+AGG - chr7_1:54463623-54463642 None:intergenic 35.0%
CTAACAAGGTAACATTTACG+TGG + chr7_1:54463833-54463852 Msa1024710:intron 35.0%
TTATTCAAATAATCACCGCG+TGG + chr7_1:54463878-54463897 Msa1024710:intron 35.0%
ACACATGCAGAATACTACAA+CGG - chr7_1:54464020-54464039 None:intergenic 35.0%
TGTAGTATTCTGCATGTGTT+AGG + chr7_1:54464021-54464040 Msa1024710:intron 35.0%
GAGTGATAGATTCAACAGAT+TGG - chr7_1:54464123-54464142 None:intergenic 35.0%
AAACGCAATGTAACATGCAT+TGG - chr7_1:54464145-54464164 None:intergenic 35.0%
!! CGTTTACCTGTTTTTCCTTT+AGG + chr7_1:54464160-54464179 Msa1024710:intron 35.0%
CAAATAAAACGTTCCCCTAA+AGG - chr7_1:54464178-54464197 None:intergenic 35.0%
! TTTTGATATGTACTGCTGAC+TGG + chr7_1:54464289-54464308 Msa1024710:intron 35.0%
GCAACCTATTGGTATATCAA+TGG + chr7_1:54464432-54464451 Msa1024710:CDS 35.0%
ATGCCCATTGATATACCAAT+AGG - chr7_1:54464439-54464458 None:intergenic 35.0%
ATGTGAACCGAAATTGTCTA+CGG - chr7_1:54464593-54464612 None:intergenic 35.0%
! TTCAACTGTCTGGTTCAATT+TGG + chr7_1:54464613-54464632 Msa1024710:intron 35.0%
!! TTTAAAGGTACCTAAAGGAG+AGG + chr7_1:54464726-54464745 Msa1024710:intron 35.0%
CAAATTGTTTCCTCTCCTTT+AGG - chr7_1:54464739-54464758 None:intergenic 35.0%
CTAAAGGAGAGGAAACAATT+TGG + chr7_1:54464737-54464756 Msa1024710:CDS 35.0%
!! TTGATTTGGAAAGCTGCTAA+TGG - chr7_1:54464767-54464786 None:intergenic 35.0%
! CAAGTTTCTGTTGGTTGATT+TGG - chr7_1:54464781-54464800 None:intergenic 35.0%
GCATTTGAACAAGTTTCTGT+TGG - chr7_1:54464790-54464809 None:intergenic 35.0%
CTATGCAAGTTGTATGAAAG+TGG + chr7_1:54464848-54464867 Msa1024710:CDS 35.0%
AAATCGCGTATGCAAAACAA+TGG - chr7_1:54464979-54464998 None:intergenic 35.0%
GAGAATACCAGTACACTATA+GGG - chr7_1:54465036-54465055 None:intergenic 35.0%
AGAGAATACCAGTACACTAT+AGG - chr7_1:54465037-54465056 None:intergenic 35.0%
!!! TTGGAGTTTTTTGTTGGTGA+GGG - chr7_1:54465427-54465446 None:intergenic 35.0%
TAAATTCCATTCTTGGACCT+TGG - chr7_1:54465446-54465465 None:intergenic 35.0%
TTAAAATGAGTGGATGGTGA+TGG + chr7_1:54465466-54465485 Msa1024710:intron 35.0%
!! ACTACTTGGACTTGATTTGT+TGG + chr7_1:54465654-54465673 Msa1024710:intron 35.0%
AGCTTGCAAATCCAAGTTAT+AGG - chr7_1:54465727-54465746 None:intergenic 35.0%
GCATGTTCATAACTATGTGT+TGG - chr7_1:54465764-54465783 None:intergenic 35.0%
! CATTTTTGTTCACATTGGGA+AGG + chr7_1:54465952-54465971 Msa1024710:intron 35.0%
GAAATCAATACTTTGGTCAC+AGG + chr7_1:54466088-54466107 Msa1024710:CDS 35.0%
ATTCTACTTCTTTGAGTAGC+TGG - chr7_1:54466145-54466164 None:intergenic 35.0%
TCATAGCATTCACCAACAAA+AGG - chr7_1:54466375-54466394 None:intergenic 35.0%
CTCAAACATTGAAAGTGAAG+AGG - chr7_1:54466438-54466457 None:intergenic 35.0%
! TTGCAATTTTGCATCATAGC+AGG - chr7_1:54466543-54466562 None:intergenic 35.0%
! TTTTCAATTTCCCATGCACT+TGG - chr7_1:54466570-54466589 None:intergenic 35.0%
ATATAGTAGCTTCCTGATGA+AGG + chr7_1:54466796-54466815 Msa1024710:three_prime_UTR 35.0%
CTCATCAAGGAAACATCATT+AGG + chr7_1:54466842-54466861 Msa1024710:three_prime_UTR 35.0%
TGAAGGAAAGAAAAAGGGAA+AGG + chr7_1:54466974-54466993 Msa1024710:three_prime_UTR 35.0%
AAAAGGGAAAGGAAAACAGA+AGG + chr7_1:54466985-54467004 Msa1024710:three_prime_UTR 35.0%
!!! TGGGAAATTTTAAGGTGGTT+TGG - chr7_1:54467015-54467034 None:intergenic 35.0%
AAGGGTGAATGATGAATCAT+GGG - chr7_1:54467034-54467053 None:intergenic 35.0%
!! GTTTTGATAAGGATGCTCAA+AGG - chr7_1:54467064-54467083 None:intergenic 35.0%
CAAGGAAACATTGGAGAATT+TGG - chr7_1:54467210-54467229 None:intergenic 35.0%
TACAGTTCCAAGTTCATTCA+AGG - chr7_1:54467228-54467247 None:intergenic 35.0%
GTGTTTGAGTAGTTCATTCA+TGG - chr7_1:54467261-54467280 None:intergenic 35.0%
CTTCTAACTTTGTCAAGAAC+TGG + chr7_1:54467293-54467312 Msa1024710:three_prime_UTR 35.0%
ACTCAATGATGAATTGGCTA+AGG - chr7_1:54467342-54467361 None:intergenic 35.0%
GAGAGAACTCAATGATGAAT+TGG - chr7_1:54467348-54467367 None:intergenic 35.0%
ACAAGATGAAATGTTAACCC+TGG + chr7_1:54467446-54467465 Msa1024710:three_prime_UTR 35.0%
! TTTTCCAATGAACTGAACCA+TGG + chr7_1:54467497-54467516 Msa1024710:three_prime_UTR 35.0%
CTTCATAGTATTGTCCATAG+TGG + chr7_1:54467567-54467586 Msa1024710:three_prime_UTR 35.0%
TTGATGAATTTCTCCAAGGA+TGG - chr7_1:54467697-54467716 None:intergenic 35.0%
GCATTTGATGAATTTCTCCA+AGG - chr7_1:54467701-54467720 None:intergenic 35.0%
CCGCACAACATAATGAAAGA+AGG - chr7_1:54459170-54459189 None:intergenic 40.0%
TTCATTATGTTGTGCGGCAA+CGG + chr7_1:54459173-54459192 Msa1024710:five_prime_UTR 40.0%
! TCCCAGGTTGAACAAATTGA+AGG + chr7_1:54459479-54459498 Msa1024710:five_prime_UTR 40.0%
TGAAGGGCTAAGATGTGTTA+AGG + chr7_1:54459651-54459670 Msa1024710:five_prime_UTR 40.0%
AAGAAGAAAATGGCTACGCA+GGG - chr7_1:54459754-54459773 None:intergenic 40.0%
GTAAATTGAAGCGATTGGGT+TGG - chr7_1:54459815-54459834 None:intergenic 40.0%
GGAAGGTAAATTGAAGCGAT+TGG - chr7_1:54459820-54459839 None:intergenic 40.0%
GATCACAGGATCATAATGCA+CGG - chr7_1:54459967-54459986 None:intergenic 40.0%
TAGGACATGCATTTATGTCC+AGG + chr7_1:54460327-54460346 Msa1024710:intron 40.0%
ACATGCATTTATGTCCAGGT+TGG + chr7_1:54460331-54460350 Msa1024710:intron 40.0%
! TTACACAAGAGGCTGTTTCA+AGG - chr7_1:54460648-54460667 None:intergenic 40.0%
GCTGTGTACAATACACCAAA+TGG + chr7_1:54460680-54460699 Msa1024710:intron 40.0%
GTGTACAATACACCAAATGG+TGG + chr7_1:54460683-54460702 Msa1024710:intron 40.0%
CTCTGCTTGGTAAAAATAGC+AGG - chr7_1:54460890-54460909 None:intergenic 40.0%
TGATACGAAGTTTGGTCAAG+AGG + chr7_1:54461014-54461033 Msa1024710:intron 40.0%
TCCACCAACAAATCAAACTC+AGG + chr7_1:54461062-54461081 Msa1024710:intron 40.0%
!! ACCTGAGTTTGATTTGTTGG+TGG - chr7_1:54461066-54461085 None:intergenic 40.0%
CTGCTGAACAATTCGTTCTT+TGG + chr7_1:54461087-54461106 Msa1024710:intron 40.0%
CTGAACAATTCGTTCTTTGG+TGG + chr7_1:54461090-54461109 Msa1024710:intron 40.0%
ACCCTGTAGAGCTTAATAAG+CGG + chr7_1:54461236-54461255 Msa1024710:intron 40.0%
TCCGCTTATTAAGCTCTACA+GGG - chr7_1:54461240-54461259 None:intergenic 40.0%
CTCTCTCACTTTCATCCTAA+TGG - chr7_1:54461648-54461667 None:intergenic 40.0%
! GATGAAAGTGAGAGAGTGTA+TGG + chr7_1:54461652-54461671 Msa1024710:intron 40.0%
AAAAGAAAAGGAGCTTGCCT+GGG - chr7_1:54461702-54461721 None:intergenic 40.0%
AAAAAGAAAAGGAGCTTGCC+TGG - chr7_1:54461703-54461722 None:intergenic 40.0%
AACACACGTAGCATCTTTGA+GGG + chr7_1:54461902-54461921 Msa1024710:intron 40.0%
!!! TCTTTTTGGAGCAAGAGTGA+AGG + chr7_1:54462070-54462089 Msa1024710:intron 40.0%
CATGAGATCAAGTTTAGGAG+AGG - chr7_1:54462139-54462158 None:intergenic 40.0%
! TATTCCAAAGCTTGGTGAAC+TGG + chr7_1:54462202-54462221 Msa1024710:CDS 40.0%
! ATTCCAAAGCTTGGTGAACT+GGG + chr7_1:54462203-54462222 Msa1024710:CDS 40.0%
TATTGCTGGTGGTACAATCA+AGG + chr7_1:54462226-54462245 Msa1024710:CDS 40.0%
! GCTAGTTGTGATTGATTCTC+AGG + chr7_1:54462310-54462329 Msa1024710:intron 40.0%
! GTGATTGATTCTCAGGGTTA+TGG + chr7_1:54462317-54462336 Msa1024710:intron 40.0%
AGCAATAGCACTTCCAGTTA+CGG - chr7_1:54462357-54462376 None:intergenic 40.0%
!! CATTTTGGTCCATTCATCCT+TGG + chr7_1:54462418-54462437 Msa1024710:CDS 40.0%
CCACACAATGCTATACTTTG+TGG - chr7_1:54462538-54462557 None:intergenic 40.0%
CCACAAAGTATAGCATTGTG+TGG + chr7_1:54462535-54462554 Msa1024710:intron 40.0%
TTTGAAGACCACAGCAACTA+AGG + chr7_1:54462742-54462761 Msa1024710:CDS 40.0%
TGTAAATATCAGGTGGAAGG+TGG + chr7_1:54462879-54462898 Msa1024710:intron 40.0%
!! CAGTACGTTTGCTGATTTGT+TGG + chr7_1:54462938-54462957 Msa1024710:CDS 40.0%
CGAAAATCCGTGGAATTTCA+TGG + chr7_1:54463110-54463129 Msa1024710:intron 40.0%
GGAAAGTCCATGAAATTCCA+CGG - chr7_1:54463120-54463139 None:intergenic 40.0%
AAGAAAATCTCGAGCCAAAC+AGG - chr7_1:54463351-54463370 None:intergenic 40.0%
TTCATCGTTTCCTGTTGGAA+TGG + chr7_1:54463426-54463445 Msa1024710:intron 40.0%
ATCGTAAAAAAGGATGCACC+TGG + chr7_1:54463685-54463704 Msa1024710:CDS 40.0%
GGACTTCGAATCGTACAAAA+TGG + chr7_1:54463739-54463758 Msa1024710:CDS 40.0%
! GAAAGTTTTTGTCCCTGATG+AGG + chr7_1:54463777-54463796 Msa1024710:CDS 40.0%
! AGGAGGAGTCAATTCTTTTC+AGG + chr7_1:54463807-54463826 Msa1024710:CDS 40.0%
! TTGTTGTTGATGAAACCACG+CGG - chr7_1:54463896-54463915 None:intergenic 40.0%
GAGGATACATGTACTAGGAT+TGG - chr7_1:54463977-54463996 None:intergenic 40.0%
!! ACAGCAACTGGTTCTAAAAG+AGG - chr7_1:54463996-54464015 None:intergenic 40.0%
GACTGAAATCAGCATTTGTC+TGG + chr7_1:54464048-54464067 Msa1024710:intron 40.0%
!! TCAGCATTTGTCTGGTTCTA+CGG + chr7_1:54464056-54464075 Msa1024710:intron 40.0%
! GTGCACTGGCAATAAAAGAA+TGG - chr7_1:54464082-54464101 None:intergenic 40.0%
TTTATTGCCAGTGCACTAGA+AGG + chr7_1:54464086-54464105 Msa1024710:intron 40.0%
! TTTTCTTCTCTCCGAAGCAT+TGG + chr7_1:54464245-54464264 Msa1024710:intron 40.0%
GCATCTATGATATGTGTCAC+AGG + chr7_1:54464455-54464474 Msa1024710:CDS 40.0%
AAATCGAACCAGTGAGACTT+TGG + chr7_1:54464519-54464538 Msa1024710:intron 40.0%
!! TGTCTACGGCTCATTGATTT+CGG - chr7_1:54464579-54464598 None:intergenic 40.0%
CAATGAGCCGTAGACAATTT+CGG + chr7_1:54464583-54464602 Msa1024710:intron 40.0%
GTTCAAGCGATGATTCTTGT+TGG + chr7_1:54464818-54464837 Msa1024710:CDS 40.0%
AAGCGATGATTCTTGTTGGT+TGG + chr7_1:54464822-54464841 Msa1024710:CDS 40.0%
TGAAAGTGGTAAAATGACCC+CGG + chr7_1:54464862-54464881 Msa1024710:CDS 40.0%
TGCCTTAGTGTAGCACAATT+TGG + chr7_1:54464945-54464964 Msa1024710:intron 40.0%
GTCCAAATTGTGCTACACTA+AGG - chr7_1:54464950-54464969 None:intergenic 40.0%
ATAGTAGCCCTATAGTGTAC+TGG + chr7_1:54465026-54465045 Msa1024710:intron 40.0%
! TTCAGTCATGGATTACCTTG+AGG + chr7_1:54465213-54465232 Msa1024710:intron 40.0%
! TCAGTCATGGATTACCTTGA+GGG + chr7_1:54465214-54465233 Msa1024710:intron 40.0%
!!! TTTTTTGTTGGTGAGGGCTT+TGG - chr7_1:54465421-54465440 None:intergenic 40.0%
!!! CTTGGAGTTTTTTGTTGGTG+AGG - chr7_1:54465428-54465447 None:intergenic 40.0%
CTCACCAACAAAAAACTCCA+AGG + chr7_1:54465426-54465445 Msa1024710:intron 40.0%
!!! TGGACCTTGGAGTTTTTTGT+TGG - chr7_1:54465433-54465452 None:intergenic 40.0%
AAAACTCCAAGGTCCAAGAA+TGG + chr7_1:54465437-54465456 Msa1024710:intron 40.0%
AAGTCCAAGTAGTTAGCATG+AGG - chr7_1:54465647-54465666 None:intergenic 40.0%
!! TGGACTTGATTTGTTGGTGA+AGG + chr7_1:54465660-54465679 Msa1024710:intron 40.0%
TACACTGTGGTCCTATAACT+TGG + chr7_1:54465713-54465732 Msa1024710:intron 40.0%
ATTTGCAAGCTATGTAGCAC+TGG + chr7_1:54465736-54465755 Msa1024710:intron 40.0%
GTTCATTCTTCACACAGAGA+GGG - chr7_1:54466492-54466511 None:intergenic 40.0%
ATTGCAAATGTCCAAGTGCA+TGG + chr7_1:54466556-54466575 Msa1024710:three_prime_UTR 40.0%
TTGCAAATGTCCAAGTGCAT+GGG + chr7_1:54466557-54466576 Msa1024710:three_prime_UTR 40.0%
TTTCCTTGATGAGCAAGATC+AGG - chr7_1:54466835-54466854 None:intergenic 40.0%
CAAGGGTGAATGATGAATCA+TGG - chr7_1:54467035-54467054 None:intergenic 40.0%
CATGATTCATCATTCACCCT+TGG + chr7_1:54467033-54467052 Msa1024710:three_prime_UTR 40.0%
ATGCTCAAAGGGAAAACCAA+GGG - chr7_1:54467052-54467071 None:intergenic 40.0%
AAAAAGTTGAGAACCTGAGC+TGG + chr7_1:54467125-54467144 Msa1024710:three_prime_UTR 40.0%
AGTTCATTCATGGCTGAAGA+GGG - chr7_1:54467251-54467270 None:intergenic 40.0%
TAGTTCATTCATGGCTGAAG+AGG - chr7_1:54467252-54467271 None:intergenic 40.0%
TACTCAAACACACTCTTCCA+TGG + chr7_1:54467270-54467289 Msa1024710:three_prime_UTR 40.0%
CTTGACAAAGTTAGAAGCCA+TGG - chr7_1:54467290-54467309 None:intergenic 40.0%
CTAACTTTGTCAAGAACTGG+TGG + chr7_1:54467296-54467315 Msa1024710:three_prime_UTR 40.0%
! TAAGGTACATGAGAGTATGG+CGG - chr7_1:54467324-54467343 None:intergenic 40.0%
AGGATTTGTCAGATGATCAG+AGG - chr7_1:54467412-54467431 None:intergenic 40.0%
AATCATTTCTCTGGGTTGCA+GGG - chr7_1:54467478-54467497 None:intergenic 40.0%
AAATCATTTCTCTGGGTTGC+AGG - chr7_1:54467479-54467498 None:intergenic 40.0%
! TTCTTCTTTTCTCACCACCA+TGG - chr7_1:54467517-54467536 None:intergenic 40.0%
! AAGAGTTGGCTGATTCTGAT+AGG - chr7_1:54467619-54467638 None:intergenic 40.0%
TCAACAACAGCAACAAGAGT+TGG - chr7_1:54467633-54467652 None:intergenic 40.0%
TTTGACGAATCATCCATCCT+TGG + chr7_1:54467681-54467700 Msa1024710:three_prime_UTR 40.0%
! GGAGGAAAGTAGGTTGAGAT+GGG - chr7_1:54459035-54459054 None:intergenic 45.0%
!! GGTGCTTTTCAGATGGGTTT+GGG - chr7_1:54459056-54459075 None:intergenic 45.0%
!! TGTGTCGGTGCTTTTCAGAT+GGG - chr7_1:54459062-54459081 None:intergenic 45.0%
!! TTGTGTCGGTGCTTTTCAGA+TGG - chr7_1:54459063-54459082 None:intergenic 45.0%
CACCGACACAATAGTAGTGA+CGG + chr7_1:54459072-54459091 Msa1024710:five_prime_UTR 45.0%
CACCGTCACTACTATTGTGT+CGG - chr7_1:54459077-54459096 None:intergenic 45.0%
TAGAGAAGGAAGGACAACCT+CGG - chr7_1:54459126-54459145 None:intergenic 45.0%
! TTCTTTGCCTGAGTTTTCCC+AGG + chr7_1:54459463-54459482 Msa1024710:five_prime_UTR 45.0%
TGTTCAACCTGGGAAAACTC+AGG - chr7_1:54459473-54459492 None:intergenic 45.0%
!!! TTTTCACGTTCTGGCTTCTG+TGG - chr7_1:54459598-54459617 None:intergenic 45.0%
ACAGAAGCCAGAACGTGAAA+AGG + chr7_1:54459597-54459616 Msa1024710:five_prime_UTR 45.0%
AGGAGGTAATTTCACTGGAG+AGG + chr7_1:54459721-54459740 Msa1024710:five_prime_UTR 45.0%
GAAGAAGAAAATGGCTACGC+AGG - chr7_1:54459755-54459774 None:intergenic 45.0%
!! CGATTGGGTTGGTTTGTGTT+GGG - chr7_1:54459804-54459823 None:intergenic 45.0%
!! TTGTGGATTGGAACGAGTCA+TGG - chr7_1:54459875-54459894 None:intergenic 45.0%
ATGACTCGTTCCAATCCACA+AGG + chr7_1:54459874-54459893 Msa1024710:CDS 45.0%
GAGAGAGATACCTTGTGGAT+TGG - chr7_1:54459887-54459906 None:intergenic 45.0%
AGAGAGAGAGAGATACCTTG+TGG - chr7_1:54459892-54459911 None:intergenic 45.0%
GCAAGAGAAACATCAAGTGG+TGG - chr7_1:54460116-54460135 None:intergenic 45.0%
GTTACCACAAGGAGGAAAAG+TGG - chr7_1:54460162-54460181 None:intergenic 45.0%
TCAAGGTTGTTACCACAAGG+AGG - chr7_1:54460170-54460189 None:intergenic 45.0%
GTCATGTGACTAGAAGGTCA+CGG + chr7_1:54460614-54460633 Msa1024710:intron 45.0%
TCATGTGACTAGAAGGTCAC+GGG + chr7_1:54460615-54460634 Msa1024710:intron 45.0%
ATGCTTAGTTAGGCTCTGCT+TGG - chr7_1:54460903-54460922 None:intergenic 45.0%
GACCAAACTTCGTATCACCA+GGG - chr7_1:54461011-54461030 None:intergenic 45.0%
TGACCAAACTTCGTATCACC+AGG - chr7_1:54461012-54461031 None:intergenic 45.0%
CTCCGCTTATTAAGCTCTAC+AGG - chr7_1:54461241-54461260 None:intergenic 45.0%
AACTAACCATTGGGCCTGTT+TGG - chr7_1:54461352-54461371 None:intergenic 45.0%
GAGCAAGATATGCTTGGGTT+TGG + chr7_1:54461527-54461546 Msa1024710:intron 45.0%
CAAGATATGCTTGGGTTTGG+AGG + chr7_1:54461530-54461549 Msa1024710:intron 45.0%
TATTGCTCCCATAATGACCC+AGG + chr7_1:54461682-54461701 Msa1024710:intron 45.0%
CAACACACGTAGCATCTTTG+AGG + chr7_1:54461901-54461920 Msa1024710:intron 45.0%
ATACCCAGTTCACCAAGCTT+TGG - chr7_1:54462209-54462228 None:intergenic 45.0%
! TGAGCATTGCCAAGGATGAA+TGG - chr7_1:54462430-54462449 None:intergenic 45.0%
TCCTTGGCAATGCTCACTAT+AGG + chr7_1:54462434-54462453 Msa1024710:CDS 45.0%
! ACCTATAGTGAGCATTGCCA+AGG - chr7_1:54462438-54462457 None:intergenic 45.0%
!! GCAAAAGTATCTACCGTCGT+TGG + chr7_1:54462573-54462592 Msa1024710:CDS 45.0%
!!! GTTTTTAGCTGTGCCAACGA+CGG - chr7_1:54462589-54462608 None:intergenic 45.0%
!! GTTGGGTTAGTCTTCTTCCT+TGG + chr7_1:54462617-54462636 Msa1024710:intron 45.0%
GAAGTTACCACTCCTCAAAG+AGG + chr7_1:54462666-54462685 Msa1024710:intron 45.0%
! GAAACAACCTCTTTGAGGAG+TGG - chr7_1:54462676-54462695 None:intergenic 45.0%
TCCATAGTCAGGTTCAGTCA+AGG - chr7_1:54462708-54462727 None:intergenic 45.0%
CTTGCATCACTTCCATAGTC+AGG - chr7_1:54462719-54462738 None:intergenic 45.0%
TCACTGAACCTTAGTTGCTG+TGG - chr7_1:54462753-54462772 None:intergenic 45.0%
AATATCAGGTGGAAGGTGGT+TGG + chr7_1:54462883-54462902 Msa1024710:intron 45.0%
! TGTTTCCTATCCACCGCTTT+TGG - chr7_1:54462920-54462939 None:intergenic 45.0%
TGGGTGCGAAGAAATAGTAC+AGG - chr7_1:54463141-54463160 None:intergenic 45.0%
CCAAATCTATGGCCACTACT+CGG + chr7_1:54463226-54463245 Msa1024710:intron 45.0%
ATGGTCCAACCTACGAAAGA+AGG + chr7_1:54463445-54463464 Msa1024710:intron 45.0%
TTCCACCTTCTTTCGTAGGT+TGG - chr7_1:54463453-54463472 None:intergenic 45.0%
CTCCTATTCTGTCCTCATCA+GGG - chr7_1:54463792-54463811 None:intergenic 45.0%
CGTTCCCCTAAAGGAAAAAC+AGG - chr7_1:54464169-54464188 None:intergenic 45.0%
ATGGTTGCTTGGCAACCTAT+TGG + chr7_1:54464421-54464440 Msa1024710:CDS 45.0%
!! CACTGGTTCGATTTCTGGTT+TGG - chr7_1:54464513-54464532 None:intergenic 45.0%
!! AGTCTCACTGGTTCGATTTC+TGG - chr7_1:54464518-54464537 None:intergenic 45.0%
ACCAGTGAGACTTTGGATCA+TGG + chr7_1:54464526-54464545 Msa1024710:intron 45.0%
ACCATGATCCAAAGTCTCAC+TGG - chr7_1:54464530-54464549 None:intergenic 45.0%
!! TACGGCTCATTGATTTCGGT+GGG - chr7_1:54464575-54464594 None:intergenic 45.0%
CGGTTCACATTTCAACTGTC+TGG + chr7_1:54464603-54464622 Msa1024710:intron 45.0%
GAAAGTGGTAAAATGACCCC+GGG + chr7_1:54464863-54464882 Msa1024710:CDS 45.0%
! GCAAGAGAAACAGCTGCTTT+GGG + chr7_1:54465236-54465255 Msa1024710:CDS 45.0%
! CAAGAGAAACAGCTGCTTTG+GGG + chr7_1:54465237-54465256 Msa1024710:CDS 45.0%
!! GCTTGGTGGCAATGGAATTT+TGG + chr7_1:54465268-54465287 Msa1024710:CDS 45.0%
!! GGCTGATTTTCTAGTGGCTA+AGG + chr7_1:54465289-54465308 Msa1024710:CDS 45.0%
TAGCATGAGGCAAGGTTCAT+AGG - chr7_1:54465634-54465653 None:intergenic 45.0%
CAAGTAGTTAGCATGAGGCA+AGG - chr7_1:54465642-54465661 None:intergenic 45.0%
CTTGCCTCATGCTAACTACT+TGG + chr7_1:54465640-54465659 Msa1024710:intron 45.0%
GAACCTATCTACACCTACGA+AGG + chr7_1:54466058-54466077 Msa1024710:CDS 45.0%
GATTTCATACGTGCCTTCGT+AGG - chr7_1:54466074-54466093 None:intergenic 45.0%
GTCACAGGAAGAGAAGTTAC+CGG + chr7_1:54466103-54466122 Msa1024710:CDS 45.0%
TGGCTTAAAGCTGGCAAAAC+CGG - chr7_1:54466125-54466144 None:intergenic 45.0%
! TTGAGTAGCTGGCTTAAAGC+TGG - chr7_1:54466134-54466153 None:intergenic 45.0%
GGTTCATTCTTCACACAGAG+AGG - chr7_1:54466493-54466512 None:intergenic 45.0%
CATGCAATGCATCCTTCATC+AGG - chr7_1:54466811-54466830 None:intergenic 45.0%
CTGATGAAGGATGCATTGCA+TGG + chr7_1:54466809-54466828 Msa1024710:three_prime_UTR 45.0%
GATGCTCAAAGGGAAAACCA+AGG - chr7_1:54467053-54467072 None:intergenic 45.0%
CAGCTCAAGGTTAGGTCTTT+AGG - chr7_1:54467086-54467105 None:intergenic 45.0%
GCAGATATTGAAACCAGCTC+AGG - chr7_1:54467141-54467160 None:intergenic 45.0%
TGTCTCAGTCCTCAAAGCAT+CGG + chr7_1:54467175-54467194 Msa1024710:three_prime_UTR 45.0%
TGACAAATGCCGATGCTTTG+AGG - chr7_1:54467187-54467206 None:intergenic 45.0%
GGCTAAGGTACATGAGAGTA+TGG - chr7_1:54467327-54467346 None:intergenic 45.0%
TCCAATGAACTGAACCATGG+TGG + chr7_1:54467500-54467519 Msa1024710:three_prime_UTR 45.0%
ACCACCATGGTTCAGTTCAT+TGG - chr7_1:54467504-54467523 None:intergenic 45.0%
! AACAGAGTACTCTGCCACTA+TGG - chr7_1:54467584-54467603 None:intergenic 45.0%
!! AAATATAAAAAAAAAAATGA+AGG + chr7_1:54466957-54466976 Msa1024710:three_prime_UTR 5.0%
! GGGAGGAAAGTAGGTTGAGA+TGG - chr7_1:54459036-54459055 None:intergenic 50.0%
! GATGGGTTTGGGAGGAAAGT+AGG - chr7_1:54459045-54459064 None:intergenic 50.0%
!! GCTTTTCAGATGGGTTTGGG+AGG - chr7_1:54459053-54459072 None:intergenic 50.0%
!! CGGTGCTTTTCAGATGGGTT+TGG - chr7_1:54459057-54459076 None:intergenic 50.0%
CGACACAATAGTAGTGACGG+TGG + chr7_1:54459075-54459094 Msa1024710:five_prime_UTR 50.0%
GTAGTGACGGTGGAGAAGTA+TGG + chr7_1:54459085-54459104 Msa1024710:five_prime_UTR 50.0%
ATTATGTTGTGCGGCAACGG+CGG + chr7_1:54459176-54459195 Msa1024710:five_prime_UTR 50.0%
AATCATGTAATCCGCCGTCG+TGG - chr7_1:54459209-54459228 None:intergenic 50.0%
!! GCGATTGGGTTGGTTTGTGT+TGG - chr7_1:54459805-54459824 None:intergenic 50.0%
ATTGGAACGAGTCATGGTGG+TGG - chr7_1:54459869-54459888 None:intergenic 50.0%
! TGGATTGGAACGAGTCATGG+TGG - chr7_1:54459872-54459891 None:intergenic 50.0%
CAAGGAGGAAAAGTGGATGC+TGG - chr7_1:54460155-54460174 None:intergenic 50.0%
!! GCATCCACTTTTCCTCCTTG+TGG + chr7_1:54460155-54460174 Msa1024710:CDS 50.0%
CAACTTTATCCGTTGCGCCA+AGG - chr7_1:54460595-54460614 None:intergenic 50.0%
ACCACTTGAGCCCAATTGCT+TGG + chr7_1:54461122-54461141 Msa1024710:intron 50.0%
ACCAAGCAATTGGGCTCAAG+TGG - chr7_1:54461126-54461145 None:intergenic 50.0%
ACCATTGGGCCTGTTTGGAT+TGG - chr7_1:54461347-54461366 None:intergenic 50.0%
!! CGATGACTTGTTGAAACCGG+AGG + chr7_1:54461616-54461635 Msa1024710:CDS 50.0%
GAGCTTGCCTGGGTCATTAT+GGG - chr7_1:54461692-54461711 None:intergenic 50.0%
! CTTGGTGAACTGGGTATTGC+TGG + chr7_1:54462212-54462231 Msa1024710:CDS 50.0%
TCTCAGGGTTATGGTTGTCC+TGG + chr7_1:54462326-54462345 Msa1024710:intron 50.0%
! TGTCCTGGTCTTTCCGTAAC+TGG + chr7_1:54462341-54462360 Msa1024710:CDS 50.0%
CTTCCAGTTACGGAAAGACC+AGG - chr7_1:54462347-54462366 None:intergenic 50.0%
GCCTTGACTGAACCTGACTA+TGG + chr7_1:54462704-54462723 Msa1024710:CDS 50.0%
GAAGGTGGTTGGATCCTTGA+GGG + chr7_1:54462894-54462913 Msa1024710:CDS 50.0%
! CACGGATTTTCGGATCTCTG+TGG - chr7_1:54463102-54463121 None:intergenic 50.0%
CACAGAGATCCGAAAATCCG+TGG + chr7_1:54463100-54463119 Msa1024710:intron 50.0%
CCGAGTAGTGGCCATAGATT+TGG - chr7_1:54463229-54463248 None:intergenic 50.0%
! GTGAAGTTCTAGCCGAGTAG+TGG - chr7_1:54463241-54463260 None:intergenic 50.0%
! GTAGGTTGGACCATTCCAAC+AGG - chr7_1:54463439-54463458 None:intergenic 50.0%
GTCCAACCTACGAAAGAAGG+TGG + chr7_1:54463448-54463467 Msa1024710:intron 50.0%
GTCCCTGATGAGGACAGAAT+AGG + chr7_1:54463787-54463806 Msa1024710:CDS 50.0%
CCTCCTATTCTGTCCTCATC+AGG - chr7_1:54463793-54463812 None:intergenic 50.0%
CCTGATGAGGACAGAATAGG+AGG + chr7_1:54463790-54463809 Msa1024710:CDS 50.0%
TACTACAACGGCACAGCAAC+TGG - chr7_1:54464008-54464027 None:intergenic 50.0%
!! ACTTGCTGTTTCGCGTGTGA+TGG + chr7_1:54464402-54464421 Msa1024710:CDS 50.0%
TTTCGCGTGTGATGGTTGCT+TGG + chr7_1:54464410-54464429 Msa1024710:CDS 50.0%
!! CTACGGCTCATTGATTTCGG+TGG - chr7_1:54464576-54464595 None:intergenic 50.0%
TTTCCCAAGCTAGCATGACC+CGG - chr7_1:54464884-54464903 None:intergenic 50.0%
!! AGCTGTTTCTCTTGCCCTCA+AGG - chr7_1:54465231-54465250 None:intergenic 50.0%
GGCAAGAGAAACAGCTGCTT+TGG + chr7_1:54465235-54465254 Msa1024710:CDS 50.0%
! CGAGAATTGCTTGGTGGCAA+TGG + chr7_1:54465260-54465279 Msa1024710:CDS 50.0%
!! TGAGTGGATGGTGATGGTGA+TGG + chr7_1:54465472-54465491 Msa1024710:intron 50.0%
GAGGCAAGGTTCATAGGTCT+TGG - chr7_1:54465628-54465647 None:intergenic 50.0%
GTGCCTTCGTAGGTGTAGAT+AGG - chr7_1:54466064-54466083 None:intergenic 50.0%
AGCTGTCTGAGTACAGATCC+TGG + chr7_1:54466752-54466771 Msa1024710:three_prime_UTR 50.0%
TCTGAGTACAGATCCTGGTC+TGG + chr7_1:54466757-54466776 Msa1024710:three_prime_UTR 50.0%
AAAAGAGTGACAGCCAGACC+AGG - chr7_1:54466773-54466792 None:intergenic 50.0%
TGGCCTGATCTTGCTCATCA+AGG + chr7_1:54466829-54466848 Msa1024710:three_prime_UTR 50.0%
CTGAGCTTCAGCTCAAGGTT+AGG - chr7_1:54467094-54467113 None:intergenic 50.0%
TGTTGCTGAGCTTCAGCTCA+AGG - chr7_1:54467099-54467118 None:intergenic 50.0%
TGTCAGATGATCAGAGGCAG+AGG - chr7_1:54467406-54467425 None:intergenic 50.0%
GGGTTGCAGGGTTTAAACCA+GGG - chr7_1:54467466-54467485 None:intergenic 50.0%
TGGGTTGCAGGGTTTAAACC+AGG - chr7_1:54467467-54467486 None:intergenic 50.0%
! GTGACGGTGGAGAAGTATGG+TGG + chr7_1:54459088-54459107 Msa1024710:five_prime_UTR 55.0%
GAAAATGGCTACGCAGGGAG+AGG - chr7_1:54459749-54459768 None:intergenic 55.0%
GTGGATGCTGGAGTTGCTTG+AGG - chr7_1:54460143-54460162 None:intergenic 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr7_1:54460723-54460742 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr7_1:54460724-54460743 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr7_1:54460728-54460747 Msa1024710:intron 55.0%
ATCCCTTCGGTTCCCCAAGA+AGG + chr7_1:54460980-54460999 Msa1024710:intron 55.0%
TCCCTTCGGTTCCCCAAGAA+GGG + chr7_1:54460981-54461000 Msa1024710:intron 55.0%
CGCCCTGGTGATACGAAGTT+TGG + chr7_1:54461006-54461025 Msa1024710:intron 55.0%
GCCAATCCAAACAGGCCCAA+TGG + chr7_1:54461343-54461362 Msa1024710:intron 55.0%
CTTGTTGAAACCGGAGGAGC+AGG + chr7_1:54461622-54461641 Msa1024710:CDS 55.0%
ATCCTAATGGCCTGCTCCTC+CGG - chr7_1:54461635-54461654 None:intergenic 55.0%
GGAGCTTGCCTGGGTCATTA+TGG - chr7_1:54461693-54461712 None:intergenic 55.0%
! GGTGAACTGGGTATTGCTGG+TGG + chr7_1:54462215-54462234 Msa1024710:CDS 55.0%
GGAAGGTGGTTGGATCCTTG+AGG + chr7_1:54462893-54462912 Msa1024710:CDS 55.0%
GGATCCTTGAGGGCCAAAAG+CGG + chr7_1:54462904-54462923 Msa1024710:CDS 55.0%
!! GCGTTAGCCTTCTAGTGCAC+TGG - chr7_1:54464096-54464115 None:intergenic 55.0%
GTGCACTAGAAGGCTAACGC+TGG + chr7_1:54464096-54464115 Msa1024710:intron 55.0%
TTCCCAAGCTAGCATGACCC+GGG - chr7_1:54464883-54464902 None:intergenic 55.0%
! GGGTCATGCTAGCTTGGGAA+AGG + chr7_1:54464883-54464902 Msa1024710:CDS 55.0%
!! GCTTTGGGGCGAGAATTGCT+TGG + chr7_1:54465251-54465270 Msa1024710:CDS 55.0%
TTGGGGCGAGAATTGCTTGG+TGG + chr7_1:54465254-54465273 Msa1024710:CDS 55.0%
AGGACAACCTCGGCTGTGGT+GGG - chr7_1:54459116-54459135 None:intergenic 60.0%
AAGGACAACCTCGGCTGTGG+TGG - chr7_1:54459117-54459136 None:intergenic 60.0%
AGGAAGGACAACCTCGGCTG+TGG - chr7_1:54459120-54459139 None:intergenic 60.0%
GAGGGGTAACCTTGGCGCAA+CGG + chr7_1:54460583-54460602 Msa1024710:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr7_1:54460696-54460715 Msa1024710:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr7_1:54460729-54460748 Msa1024710:intron 60.0%
CCCCTTCTTGGGGAACCGAA+GGG - chr7_1:54460985-54461004 None:intergenic 60.0%
CCCTTCGGTTCCCCAAGAAG+GGG + chr7_1:54460982-54461001 Msa1024710:intron 60.0%
CCTTCGGTTCCCCAAGAAGG+GGG + chr7_1:54460983-54461002 Msa1024710:intron 60.0%
AACCGGAGGAGCAGGCCATT+AGG + chr7_1:54461630-54461649 Msa1024710:CDS 60.0%
TCCTTGAGGGCCAAAAGCGG+TGG + chr7_1:54462907-54462926 Msa1024710:CDS 60.0%
!! TCCACCGCTTTTGGCCCTCA+AGG - chr7_1:54462911-54462930 None:intergenic 60.0%
GAGGGCCAAAAGCGGTGGAT+AGG + chr7_1:54462912-54462931 Msa1024710:CDS 60.0%
! ACCCCGGGTCATGCTAGCTT+GGG + chr7_1:54464878-54464897 Msa1024710:CDS 60.0%
TCCCAAGCTAGCATGACCCG+GGG - chr7_1:54464882-54464901 None:intergenic 60.0%
ATGTTGTGCGGCAACGGCGG+CGG + chr7_1:54459179-54459198 Msa1024710:five_prime_UTR 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr7_1:54460698-54460717 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr7_1:54460711-54460730 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr7_1:54460712-54460731 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr7_1:54460711-54460730 Msa1024710:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr7_1:54460712-54460731 Msa1024710:intron 65.0%
CCCCCTTCTTGGGGAACCGA+AGG - chr7_1:54460986-54461005 None:intergenic 65.0%
GACCCCGGGTCATGCTAGCT+TGG + chr7_1:54464877-54464896 Msa1024710:CDS 65.0%
CGCATACGCAGGGTCCGGGA+AGG - chr7_1:54460713-54460732 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr7_1:54460717-54460736 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr7_1:54460718-54460737 None:intergenic 70.0%
! ACCAGGGCGCCCCCTTCTTG+GGG - chr7_1:54460995-54461014 None:intergenic 70.0%
! CACCAGGGCGCCCCCTTCTT+GGG - chr7_1:54460996-54461015 None:intergenic 70.0%
! TCACCAGGGCGCCCCCTTCT+TGG - chr7_1:54460997-54461016 None:intergenic 70.0%
GGTGGCACCCACCACAGCCG+AGG + chr7_1:54459106-54459125 Msa1024710:five_prime_UTR 75.0%
!! TCCCCAAGAAGGGGGCGCCC+TGG + chr7_1:54460991-54461010 Msa1024710:intron 75.0%
! ACGGCGGCGGCGCACCACGA+CGG + chr7_1:54459192-54459211 Msa1024710:five_prime_UTR 80.0%
! GCGGCGGCGCACCACGACGG+CGG + chr7_1:54459195-54459214 Msa1024710:five_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 54459007 54467763 54459007 ID=Msa1024710;Name=Msa1024710
chr7_1 mRNA 54459007 54467763 54459007 ID=Msa1024710-mRNA-1;Parent=Msa1024710;Name=Msa1024710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=867|0.92|0.92|1|0.92|0.85|14|1564|418
chr7_1 exon 54459007 54459895 54459007 ID=Msa1024710-mRNA-1:exon:10787;Parent=Msa1024710-mRNA-1
chr7_1 exon 54460078 54460176 54460078 ID=Msa1024710-mRNA-1:exon:10788;Parent=Msa1024710-mRNA-1
chr7_1 exon 54461597 54461658 54461597 ID=Msa1024710-mRNA-1:exon:10789;Parent=Msa1024710-mRNA-1
chr7_1 exon 54462170 54462247 54462170 ID=Msa1024710-mRNA-1:exon:10790;Parent=Msa1024710-mRNA-1
chr7_1 exon 54462332 54462455 54462332 ID=Msa1024710-mRNA-1:exon:10791;Parent=Msa1024710-mRNA-1
chr7_1 exon 54462548 54462621 54462548 ID=Msa1024710-mRNA-1:exon:10792;Parent=Msa1024710-mRNA-1
chr7_1 exon 54462704 54462763 54462704 ID=Msa1024710-mRNA-1:exon:10793;Parent=Msa1024710-mRNA-1
chr7_1 exon 54462891 54463000 54462891 ID=Msa1024710-mRNA-1:exon:10794;Parent=Msa1024710-mRNA-1
chr7_1 exon 54463681 54463840 54463681 ID=Msa1024710-mRNA-1:exon:10795;Parent=Msa1024710-mRNA-1
chr7_1 exon 54464400 54464476 54464400 ID=Msa1024710-mRNA-1:exon:10796;Parent=Msa1024710-mRNA-1
chr7_1 exon 54464733 54464904 54464733 ID=Msa1024710-mRNA-1:exon:10797;Parent=Msa1024710-mRNA-1
chr7_1 exon 54465218 54465310 54465218 ID=Msa1024710-mRNA-1:exon:10798;Parent=Msa1024710-mRNA-1
chr7_1 exon 54466043 54466285 54466043 ID=Msa1024710-mRNA-1:exon:10799;Parent=Msa1024710-mRNA-1
chr7_1 exon 54466317 54467763 54466317 ID=Msa1024710-mRNA-1:exon:10800;Parent=Msa1024710-mRNA-1
chr7_1 five_prime_UTR 54459007 54459873 54459007 ID=Msa1024710-mRNA-1:five_prime_utr;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54459874 54459895 54459874 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54460078 54460176 54460078 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54461597 54461658 54461597 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54462170 54462247 54462170 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54462332 54462455 54462332 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54462548 54462621 54462548 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54462704 54462763 54462704 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54462891 54463000 54462891 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54463681 54463840 54463681 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54464400 54464476 54464400 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54464733 54464904 54464733 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54465218 54465310 54465218 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 CDS 54466043 54466168 54466043 ID=Msa1024710-mRNA-1:cds;Parent=Msa1024710-mRNA-1
chr7_1 three_prime_UTR 54466169 54466285 54466169 ID=Msa1024710-mRNA-1:three_prime_utr;Parent=Msa1024710-mRNA-1
chr7_1 three_prime_UTR 54466317 54467763 54466317 ID=Msa1024710-mRNA-1:three_prime_utr;Parent=Msa1024710-mRNA-1
Gene Sequence

>Msa1024710

ATGACTCGTTCCAATCCACAAGATAAGAATGGAAACATGCCTTCATATTTTGATTTGCCACCACTTGATGTTTCTCTTGCATTTCCTCAAGCAACTCCAGCATCCACTTTTCCTCCTTGTGCTTCAGATTATTTTCAATTCGATGACTTGTTGAAACCGGAGGAGCAGGCCATTAGGATGAAACATTGGGAGAAAGCTGAATTCCCATTTCATGCTATTCCAAAGCTTGGTGAACTGGGTATTGCTGGTGGTACAATCAAGGGTTATGGTTGTCCTGGTCTTTCCGTAACTGGAAGTGCTATTGCTACAGCAGAAGTTGCTAGAGTTGATGCAAGTTGTTCAACTTTCATTTTGGTCCATTCATCCTTGGCAATGCTCACTATAGCATTGTGTGGGTCTGAAGCTCAAAAGCAAAAGTATCTACCGTCGTTGGCACAGCTAAAAACTATAGCATGTTGGGCCTTGACTGAACCTGACTATGGAAGTGATGCAAGTGCTTTGAAGACCACAGCAACTAAGGTGGAAGGTGGTTGGATCCTTGAGGGCCAAAAGCGGTGGATAGGAAACAGTACGTTTGCTGATTTGTTGGTTATCTTCGCAAGGAATACCTCAACAAATCAAATAAATGGTTATATCGTAAAAAAGGATGCACCTGGTTTAACTGTCACAAAAATAGAGAACAAAATTGGACTTCGAATCGTACAAAATGGAGACATTGTTATGAGGAAAGTTTTTGTCCCTGATGAGGACAGAATAGGAGGAGTCAATTCTTTTCAGGATACTAACAAGGTACTTGCTGTTTCGCGTGTGATGGTTGCTTGGCAACCTATTGGTATATCAATGGGCATCTATGATATGTGTCACAGGTACCTAAAGGAGAGGAAACAATTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAAACTTGTTCAAATGCTCAGTAACGTTCAAGCGATGATTCTTGTTGGTTGGCGTCTATGCAAGTTGTATGAAAGTGGTAAAATGACCCCGGGTCATGCTAGCTTGGGAAAGTCATGGATTACCTTGAGGGCAAGAGAAACAGCTGCTTTGGGGCGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTAGTGGCTAAGGCATTCTGTGACTTAGAACCTATCTACACCTACGAAGGCACGTATGAAATCAATACTTTGGTCACAGGAAGAGAAGTTACCGGTTTTGCCAGCTTTAAGCCAGCTACTCAAAGAAGTAGAATGTGA
Protein sequence

>Msa1024710

MTRSNPQDKNGNMPSYFDLPPLDVSLAFPQATPASTFPPCASDYFQFDDLLKPEEQAIRMKHWEKAEFPFHAIPKLGELGIAGGTIKGYGCPGLSVTGSAIATAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLPSLAQLKTIACWALTEPDYGSDASALKTTATKVEGGWILEGQKRWIGNSTFADLLVIFARNTSTNQINGYIVKKDAPGLTVTKIENKIGLRIVQNGDIVMRKVFVPDEDRIGGVNSFQDTNKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLSNVQAMILVGWRLCKLYESGKMTPGHASLGKSWITLRARETAALGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYEINTLVTGREVTGFASFKPATQRSRM*