Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1068700 | XP_003624319.1 | 99.367 | 158 | 1 | 0 | 1 | 158 | 1 | 158 | 1.34e-111 | 325 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1068700 | sp|P28188|RAD2A_ARATH | 94.304 | 158 | 9 | 0 | 1 | 158 | 1 | 158 | 1.28e-109 | 313 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1068700 | G7KU87 | 99.367 | 158 | 1 | 0 | 1 | 158 | 1 | 158 | 6.39e-112 | 325 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0660650 | Msa1068700 | 0.804759 | 1.851813e-49 | -8.615850e-47 |
Msa0754560 | Msa1068700 | 0.822278 | 2.580319e-53 | -8.615850e-47 |
Msa0801150 | Msa1068700 | 0.804417 | 2.182394e-49 | -8.615850e-47 |
Msa0427560 | Msa1068700 | 0.801711 | 7.915699e-49 | -8.615850e-47 |
Msa0481770 | Msa1068700 | 0.804957 | 1.683459e-49 | -8.615850e-47 |
Msa1029020 | Msa1068700 | 0.819894 | 9.138798e-53 | -8.615850e-47 |
Msa1068700 | Msa1134180 | 0.818843 | 1.585934e-52 | -8.615850e-47 |
Msa1068700 | Msa1134260 | 0.813151 | 2.959740e-51 | -8.615850e-47 |
Msa1068700 | Msa1215390 | 0.813791 | 2.140877e-51 | -8.615850e-47 |
Msa1068700 | Msa1367660 | 0.801156 | 1.028555e-48 | -8.615850e-47 |
Msa1068700 | Msa1453600 | 0.806273 | 8.912280e-50 | -8.615850e-47 |
Msa0518190 | Msa1068700 | 0.824940 | 6.145997e-54 | -8.615850e-47 |
Msa0866040 | Msa1068700 | 0.806976 | 6.333285e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1068700 | MtrunA17_Chr7g0250531 | 99.367 | 158 | 1 | 0 | 1 | 158 | 1 | 158 | 1.23e-115 | 325 |
Msa1068700 | MtrunA17_Chr8g0335471 | 95.570 | 158 | 7 | 0 | 1 | 158 | 1 | 158 | 3.74e-111 | 314 |
Msa1068700 | MtrunA17_Chr4g0055651 | 90.506 | 158 | 15 | 0 | 1 | 158 | 1 | 158 | 4.41e-107 | 303 |
Msa1068700 | MtrunA17_Chr2g0276931 | 85.161 | 155 | 23 | 0 | 4 | 158 | 5 | 159 | 7.19e-95 | 273 |
Msa1068700 | MtrunA17_Chr1g0182321 | 70.513 | 156 | 45 | 1 | 4 | 158 | 11 | 166 | 3.34e-78 | 231 |
Msa1068700 | MtrunA17_Chr1g0182301 | 70.513 | 156 | 45 | 1 | 4 | 158 | 11 | 166 | 3.93e-78 | 231 |
Msa1068700 | MtrunA17_Chr1g0212521 | 69.872 | 156 | 46 | 1 | 4 | 158 | 11 | 166 | 1.37e-77 | 229 |
Msa1068700 | MtrunA17_Chr4g0030911 | 69.872 | 156 | 46 | 1 | 4 | 158 | 11 | 166 | 2.73e-77 | 229 |
Msa1068700 | MtrunA17_Chr7g0263071 | 69.872 | 156 | 46 | 1 | 4 | 158 | 11 | 166 | 4.51e-77 | 228 |
Msa1068700 | MtrunA17_Chr2g0327911 | 62.821 | 156 | 56 | 2 | 5 | 158 | 12 | 167 | 1.37e-67 | 204 |
Msa1068700 | MtrunA17_Chr2g0276941 | 55.484 | 155 | 69 | 0 | 4 | 158 | 11 | 165 | 1.72e-58 | 181 |
Msa1068700 | MtrunA17_Chr6g0458081 | 55.195 | 154 | 69 | 0 | 5 | 158 | 3 | 156 | 2.00e-58 | 181 |
Msa1068700 | MtrunA17_Chr2g0290891 | 55.195 | 154 | 69 | 0 | 5 | 158 | 3 | 156 | 4.52e-58 | 180 |
Msa1068700 | MtrunA17_Chr4g0032201 | 52.532 | 158 | 75 | 0 | 1 | 158 | 5 | 162 | 1.09e-57 | 179 |
Msa1068700 | MtrunA17_Chr7g0234201 | 56.579 | 152 | 66 | 0 | 7 | 158 | 12 | 163 | 2.77e-57 | 178 |
Msa1068700 | MtrunA17_Chr3g0112681 | 52.532 | 158 | 75 | 0 | 1 | 158 | 5 | 162 | 4.27e-56 | 175 |
Msa1068700 | MtrunA17_Chr7g0265001 | 56.410 | 156 | 66 | 2 | 5 | 158 | 13 | 168 | 9.61e-56 | 174 |
Msa1068700 | MtrunA17_Chr8g0384311 | 57.962 | 157 | 63 | 3 | 4 | 158 | 9 | 164 | 1.08e-55 | 174 |
Msa1068700 | MtrunA17_Chr1g0159481 | 59.236 | 157 | 61 | 3 | 4 | 158 | 13 | 168 | 1.52e-55 | 173 |
Msa1068700 | MtrunA17_Chr4g0040781 | 56.129 | 155 | 68 | 0 | 4 | 158 | 9 | 163 | 1.83e-54 | 171 |
Msa1068700 | MtrunA17_Chr2g0315551 | 55.484 | 155 | 69 | 0 | 4 | 158 | 9 | 163 | 1.89e-54 | 171 |
Msa1068700 | MtrunA17_Chr1g0189361 | 53.595 | 153 | 71 | 0 | 6 | 158 | 12 | 164 | 1.98e-54 | 171 |
Msa1068700 | MtrunA17_Chr2g0283131 | 55.484 | 155 | 69 | 0 | 4 | 158 | 9 | 163 | 4.93e-54 | 170 |
Msa1068700 | MtrunA17_Chr3g0123821 | 50.955 | 157 | 77 | 0 | 2 | 158 | 10 | 166 | 5.48e-54 | 170 |
Msa1068700 | MtrunA17_Chr8g0381841 | 51.592 | 157 | 76 | 0 | 2 | 158 | 11 | 167 | 9.78e-54 | 169 |
Msa1068700 | MtrunA17_Chr4g0046261 | 54.839 | 155 | 70 | 0 | 4 | 158 | 9 | 163 | 1.45e-53 | 168 |
Msa1068700 | MtrunA17_Chr7g0231131 | 51.592 | 157 | 76 | 0 | 2 | 158 | 9 | 165 | 2.33e-53 | 168 |
Msa1068700 | MtrunA17_Chr1g0174281 | 50.955 | 157 | 77 | 0 | 2 | 158 | 9 | 165 | 5.15e-53 | 167 |
Msa1068700 | MtrunA17_Chr2g0319951 | 54.194 | 155 | 71 | 0 | 4 | 158 | 9 | 163 | 5.70e-53 | 167 |
Msa1068700 | MtrunA17_Chr8g0349711 | 51.974 | 152 | 73 | 0 | 7 | 158 | 5 | 156 | 1.24e-52 | 166 |
Msa1068700 | MtrunA17_Chr7g0214241 | 53.289 | 152 | 71 | 0 | 7 | 158 | 14 | 165 | 4.84e-52 | 165 |
Msa1068700 | MtrunA17_Chr1g0180291 | 56.410 | 156 | 65 | 3 | 5 | 158 | 11 | 165 | 8.20e-52 | 164 |
Msa1068700 | MtrunA17_Chr2g0325091 | 55.063 | 158 | 71 | 0 | 1 | 158 | 4 | 161 | 8.75e-52 | 164 |
Msa1068700 | MtrunA17_Chr3g0130271 | 55.696 | 158 | 66 | 4 | 4 | 158 | 8 | 164 | 1.61e-51 | 163 |
Msa1068700 | MtrunA17_Chr8g0351861 | 50.980 | 153 | 75 | 0 | 6 | 158 | 14 | 166 | 4.56e-51 | 162 |
Msa1068700 | MtrunA17_Chr8g0349681 | 53.247 | 154 | 72 | 0 | 5 | 158 | 381 | 534 | 7.69e-51 | 171 |
Msa1068700 | MtrunA17_Chr8g0349681 | 47.771 | 157 | 82 | 0 | 2 | 158 | 169 | 325 | 2.04e-47 | 161 |
Msa1068700 | MtrunA17_Chr8g0349681 | 49.342 | 152 | 77 | 0 | 7 | 158 | 12 | 163 | 8.96e-46 | 157 |
Msa1068700 | MtrunA17_Chr1g0197331 | 55.625 | 160 | 68 | 3 | 2 | 158 | 9 | 168 | 1.43e-50 | 160 |
Msa1068700 | MtrunA17_Chr8g0392931 | 54.777 | 157 | 71 | 0 | 2 | 158 | 8 | 164 | 2.20e-50 | 160 |
Msa1068700 | MtrunA17_Chr7g0275991 | 49.673 | 153 | 77 | 0 | 6 | 158 | 18 | 170 | 3.69e-50 | 160 |
Msa1068700 | MtrunA17_Chr8g0346421 | 49.367 | 158 | 80 | 0 | 1 | 158 | 19 | 176 | 7.45e-50 | 159 |
Msa1068700 | MtrunA17_Chr6g0482721 | 50.955 | 157 | 77 | 0 | 2 | 158 | 6 | 162 | 2.01e-49 | 158 |
Msa1068700 | MtrunA17_Chr3g0109721 | 46.309 | 149 | 80 | 0 | 10 | 158 | 12 | 160 | 2.33e-45 | 147 |
Msa1068700 | MtrunA17_Chr5g0433561 | 45.638 | 149 | 81 | 0 | 10 | 158 | 12 | 160 | 3.34e-44 | 144 |
Msa1068700 | MtrunA17_Chr1g0199331 | 44.000 | 150 | 83 | 1 | 10 | 158 | 33 | 182 | 8.20e-42 | 138 |
Msa1068700 | MtrunA17_Chr8g0390561 | 44.295 | 149 | 83 | 0 | 10 | 158 | 11 | 159 | 3.20e-41 | 136 |
Msa1068700 | MtrunA17_Chr8g0382221 | 44.000 | 150 | 84 | 0 | 9 | 158 | 10 | 159 | 5.77e-41 | 136 |
Msa1068700 | MtrunA17_Chr5g0400131 | 42.667 | 150 | 86 | 0 | 9 | 158 | 10 | 159 | 4.89e-40 | 134 |
Msa1068700 | MtrunA17_Chr3g0123971 | 44.000 | 150 | 84 | 0 | 9 | 158 | 10 | 159 | 5.42e-40 | 134 |
Msa1068700 | MtrunA17_Chr4g0055081 | 41.333 | 150 | 88 | 0 | 9 | 158 | 10 | 159 | 4.58e-39 | 131 |
Msa1068700 | MtrunA17_Chr4g0034871 | 41.139 | 158 | 86 | 4 | 8 | 158 | 8 | 165 | 6.63e-35 | 120 |
Msa1068700 | MtrunA17_Chr2g0331691 | 41.139 | 158 | 86 | 3 | 8 | 158 | 10 | 167 | 7.82e-35 | 120 |
Msa1068700 | MtrunA17_Chr4g0004661 | 41.139 | 158 | 86 | 3 | 8 | 158 | 64 | 221 | 4.03e-34 | 120 |
Msa1068700 | MtrunA17_Chr6g0466301 | 38.608 | 158 | 90 | 3 | 8 | 158 | 8 | 165 | 3.29e-32 | 114 |
Msa1068700 | MtrunA17_Chr6g0465491 | 38.608 | 158 | 90 | 3 | 8 | 158 | 8 | 165 | 3.29e-32 | 114 |
Msa1068700 | MtrunA17_Chr8g0383261 | 38.608 | 158 | 90 | 3 | 8 | 158 | 12 | 169 | 1.25e-31 | 112 |
Msa1068700 | MtrunA17_Chr1g0201121 | 37.975 | 158 | 91 | 3 | 8 | 158 | 8 | 165 | 3.21e-31 | 111 |
Msa1068700 | MtrunA17_Chr4g0046211 | 34.286 | 140 | 81 | 4 | 8 | 138 | 6 | 143 | 3.21e-22 | 86.7 |
Msa1068700 | MtrunA17_Chr8g0371501 | 33.129 | 163 | 95 | 6 | 8 | 158 | 6 | 166 | 9.48e-22 | 86.7 |
Msa1068700 | MtrunA17_Chr4g0037021 | 33.129 | 163 | 95 | 6 | 8 | 158 | 6 | 166 | 1.24e-21 | 86.3 |
Msa1068700 | MtrunA17_Chr6g0486041 | 34.783 | 138 | 80 | 4 | 8 | 144 | 6 | 134 | 1.85e-21 | 86.3 |
Msa1068700 | MtrunA17_Chr2g0325101 | 30.675 | 163 | 99 | 5 | 8 | 158 | 6 | 166 | 2.32e-21 | 85.5 |
Msa1068700 | MtrunA17_Chr3g0117931 | 31.288 | 163 | 98 | 5 | 8 | 158 | 8 | 168 | 5.05e-21 | 85.1 |
Msa1068700 | MtrunA17_Chr5g0405791 | 32.515 | 163 | 96 | 6 | 8 | 158 | 6 | 166 | 7.16e-21 | 84.3 |
Msa1068700 | MtrunA17_Chr6g0466161 | 35.461 | 141 | 84 | 3 | 25 | 158 | 7 | 147 | 3.17e-20 | 82.8 |
Msa1068700 | MtrunA17_Chr6g0465471 | 35.461 | 141 | 84 | 3 | 25 | 158 | 7 | 147 | 3.31e-20 | 82.8 |
Msa1068700 | MtrunA17_Chr3g0138101 | 30.872 | 149 | 100 | 2 | 9 | 157 | 14 | 159 | 1.84e-19 | 81.3 |
Msa1068700 | MtrunA17_Chr3g0138111 | 30.872 | 149 | 100 | 2 | 9 | 157 | 14 | 159 | 1.92e-19 | 81.3 |
Msa1068700 | MtrunA17_Chr3g0138121 | 30.872 | 149 | 100 | 2 | 9 | 157 | 14 | 159 | 1.96e-19 | 81.3 |
Msa1068700 | MtrunA17_Chr1g0178291 | 37.415 | 147 | 82 | 4 | 5 | 151 | 428 | 564 | 8.72e-19 | 82.0 |
Msa1068700 | MtrunA17_Chr6g0466431 | 35.354 | 99 | 55 | 1 | 8 | 106 | 8 | 97 | 1.74e-17 | 73.2 |
Msa1068700 | MtrunA17_Chr6g0465611 | 35.354 | 99 | 55 | 1 | 8 | 106 | 8 | 97 | 1.74e-17 | 73.2 |
Msa1068700 | MtrunA17_Chr5g0434561 | 34.591 | 159 | 86 | 6 | 9 | 158 | 20 | 169 | 1.92e-15 | 70.1 |
Msa1068700 | MtrunA17_Chr5g0401071 | 30.968 | 155 | 97 | 5 | 9 | 158 | 20 | 169 | 1.51e-12 | 62.4 |
Msa1068700 | MtrunA17_Chr2g0331841 | 42.373 | 59 | 34 | 0 | 77 | 135 | 2 | 60 | 6.82e-12 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1068700 | AT1G02130.1 | 94.304 | 158 | 9 | 0 | 1 | 158 | 1 | 158 | 1.30e-110 | 313 |
Msa1068700 | AT4G17530.1 | 91.139 | 158 | 14 | 0 | 1 | 158 | 1 | 158 | 6.43e-108 | 306 |
Msa1068700 | AT5G47200.1 | 90.506 | 158 | 15 | 0 | 1 | 158 | 1 | 158 | 3.44e-106 | 301 |
Msa1068700 | AT3G11730.1 | 82.911 | 158 | 27 | 0 | 1 | 158 | 1 | 158 | 2.29e-95 | 274 |
Msa1068700 | AT5G59840.1 | 69.872 | 156 | 46 | 1 | 4 | 158 | 11 | 166 | 2.38e-77 | 229 |
Msa1068700 | AT3G46060.2 | 69.872 | 156 | 46 | 1 | 4 | 158 | 11 | 166 | 4.53e-77 | 228 |
Msa1068700 | AT3G46060.3 | 69.872 | 156 | 46 | 1 | 4 | 158 | 11 | 166 | 4.53e-77 | 228 |
Msa1068700 | AT3G46060.1 | 69.872 | 156 | 46 | 1 | 4 | 158 | 11 | 166 | 4.53e-77 | 228 |
Msa1068700 | AT3G53610.2 | 68.590 | 156 | 48 | 1 | 4 | 158 | 11 | 166 | 4.92e-76 | 226 |
Msa1068700 | AT3G53610.3 | 68.590 | 156 | 48 | 1 | 4 | 158 | 11 | 166 | 4.92e-76 | 226 |
Msa1068700 | AT3G53610.1 | 68.590 | 156 | 48 | 1 | 4 | 158 | 11 | 166 | 4.92e-76 | 226 |
Msa1068700 | AT5G03520.1 | 70.513 | 156 | 45 | 1 | 4 | 158 | 11 | 166 | 1.30e-73 | 219 |
Msa1068700 | AT3G09900.1 | 69.872 | 156 | 46 | 1 | 4 | 158 | 11 | 166 | 6.93e-73 | 218 |
Msa1068700 | AT4G35860.1 | 55.195 | 154 | 69 | 0 | 5 | 158 | 3 | 156 | 6.89e-60 | 185 |
Msa1068700 | AT3G07410.1 | 57.516 | 153 | 65 | 0 | 6 | 158 | 10 | 162 | 1.48e-58 | 181 |
Msa1068700 | AT4G17170.1 | 55.195 | 154 | 69 | 0 | 5 | 158 | 3 | 156 | 3.91e-58 | 180 |
Msa1068700 | AT1G09630.1 | 54.839 | 155 | 70 | 0 | 4 | 158 | 8 | 162 | 1.74e-57 | 179 |
Msa1068700 | AT4G17160.1 | 53.896 | 154 | 71 | 0 | 5 | 158 | 3 | 156 | 1.88e-57 | 178 |
Msa1068700 | AT2G43130.1 | 54.902 | 153 | 69 | 0 | 6 | 158 | 10 | 162 | 4.52e-57 | 177 |
Msa1068700 | AT1G06400.1 | 55.414 | 157 | 70 | 0 | 2 | 158 | 7 | 163 | 5.18e-57 | 177 |
Msa1068700 | AT3G46830.1 | 52.532 | 158 | 75 | 0 | 1 | 158 | 5 | 162 | 1.66e-56 | 176 |
Msa1068700 | AT3G46830.2 | 52.532 | 158 | 75 | 0 | 1 | 158 | 5 | 162 | 1.66e-56 | 176 |
Msa1068700 | AT1G07410.1 | 51.266 | 158 | 77 | 0 | 1 | 158 | 5 | 162 | 3.11e-56 | 176 |
Msa1068700 | AT1G05810.1 | 54.248 | 153 | 70 | 0 | 6 | 158 | 10 | 162 | 8.78e-56 | 174 |
Msa1068700 | AT5G47960.1 | 54.777 | 157 | 71 | 0 | 2 | 158 | 9 | 165 | 1.01e-55 | 174 |
Msa1068700 | AT2G31680.1 | 54.248 | 153 | 70 | 0 | 6 | 158 | 10 | 162 | 1.12e-55 | 174 |
Msa1068700 | AT1G05810.2 | 54.248 | 153 | 70 | 0 | 6 | 158 | 56 | 208 | 1.83e-55 | 175 |
Msa1068700 | AT5G60860.1 | 56.774 | 155 | 67 | 0 | 4 | 158 | 9 | 163 | 3.47e-55 | 173 |
Msa1068700 | AT5G59150.1 | 50.633 | 158 | 78 | 0 | 1 | 158 | 5 | 162 | 5.55e-55 | 172 |
Msa1068700 | AT5G45750.1 | 56.129 | 155 | 68 | 0 | 4 | 158 | 9 | 163 | 6.62e-55 | 172 |
Msa1068700 | AT4G18430.1 | 56.129 | 155 | 68 | 0 | 4 | 158 | 9 | 163 | 7.29e-55 | 172 |
Msa1068700 | AT1G16920.1 | 54.839 | 155 | 70 | 0 | 4 | 158 | 9 | 163 | 7.55e-55 | 172 |
Msa1068700 | AT4G39990.1 | 53.595 | 153 | 71 | 0 | 6 | 158 | 15 | 167 | 7.72e-55 | 172 |
Msa1068700 | AT1G43890.3 | 57.862 | 159 | 64 | 3 | 2 | 158 | 7 | 164 | 9.08e-55 | 172 |
Msa1068700 | AT1G43890.1 | 57.862 | 159 | 64 | 3 | 2 | 158 | 7 | 164 | 9.08e-55 | 172 |
Msa1068700 | AT1G43890.2 | 57.862 | 159 | 64 | 3 | 2 | 158 | 7 | 164 | 9.08e-55 | 172 |
Msa1068700 | AT5G47520.1 | 54.248 | 153 | 70 | 0 | 6 | 158 | 12 | 164 | 2.94e-54 | 171 |
Msa1068700 | AT3G12160.1 | 52.229 | 157 | 75 | 0 | 2 | 158 | 9 | 165 | 3.13e-54 | 171 |
Msa1068700 | AT1G28550.1 | 54.194 | 155 | 71 | 0 | 4 | 158 | 9 | 163 | 9.30e-54 | 169 |
Msa1068700 | AT3G15060.1 | 54.839 | 155 | 70 | 0 | 4 | 158 | 9 | 163 | 1.41e-53 | 169 |
Msa1068700 | AT4G18800.1 | 55.484 | 155 | 69 | 0 | 4 | 158 | 9 | 163 | 1.69e-53 | 169 |
Msa1068700 | AT5G03520.2 | 68.376 | 117 | 36 | 1 | 43 | 158 | 40 | 156 | 2.01e-53 | 168 |
Msa1068700 | AT5G65270.1 | 50.980 | 153 | 75 | 0 | 6 | 158 | 15 | 167 | 5.66e-53 | 167 |
Msa1068700 | AT2G33870.1 | 53.548 | 155 | 72 | 0 | 4 | 158 | 9 | 163 | 4.90e-52 | 165 |
Msa1068700 | AT5G03530.2 | 56.410 | 156 | 65 | 3 | 5 | 158 | 10 | 164 | 9.54e-52 | 164 |
Msa1068700 | AT5G03530.1 | 56.410 | 156 | 65 | 3 | 5 | 158 | 10 | 164 | 9.54e-52 | 164 |
Msa1068700 | AT1G18200.1 | 54.194 | 155 | 71 | 0 | 4 | 158 | 9 | 163 | 7.91e-51 | 162 |
Msa1068700 | AT1G73640.1 | 52.258 | 155 | 74 | 0 | 4 | 158 | 9 | 163 | 4.64e-49 | 158 |
Msa1068700 | AT1G01200.1 | 48.428 | 159 | 81 | 1 | 1 | 158 | 21 | 179 | 2.70e-46 | 151 |
Msa1068700 | AT4G19640.1 | 47.651 | 149 | 78 | 0 | 10 | 158 | 12 | 160 | 1.59e-45 | 148 |
Msa1068700 | AT5G45130.1 | 46.980 | 149 | 79 | 0 | 10 | 158 | 12 | 160 | 1.03e-44 | 145 |
Msa1068700 | AT3G09910.3 | 53.205 | 156 | 70 | 3 | 5 | 158 | 10 | 164 | 1.36e-44 | 145 |
Msa1068700 | AT3G09910.1 | 53.205 | 156 | 70 | 3 | 5 | 158 | 10 | 164 | 1.36e-44 | 145 |
Msa1068700 | AT3G09910.2 | 53.205 | 156 | 70 | 3 | 5 | 158 | 10 | 164 | 1.36e-44 | 145 |
Msa1068700 | AT3G09910.5 | 53.205 | 156 | 70 | 3 | 5 | 158 | 10 | 164 | 1.60e-44 | 145 |
Msa1068700 | AT3G09910.4 | 53.205 | 156 | 70 | 3 | 5 | 158 | 10 | 164 | 1.60e-44 | 145 |
Msa1068700 | AT5G45130.2 | 46.259 | 147 | 79 | 0 | 12 | 158 | 22 | 168 | 5.21e-43 | 142 |
Msa1068700 | AT3G54840.1 | 44.667 | 150 | 82 | 1 | 10 | 158 | 35 | 184 | 1.06e-41 | 138 |
Msa1068700 | AT3G54840.2 | 44.667 | 150 | 82 | 1 | 10 | 158 | 35 | 184 | 1.37e-41 | 137 |
Msa1068700 | AT3G54840.3 | 44.295 | 149 | 82 | 1 | 11 | 158 | 2 | 150 | 1.90e-41 | 136 |
Msa1068700 | AT2G44610.1 | 44.000 | 150 | 84 | 0 | 9 | 158 | 10 | 159 | 5.19e-41 | 137 |
Msa1068700 | AT4G35860.2 | 54.717 | 106 | 48 | 0 | 53 | 158 | 5 | 110 | 1.08e-39 | 132 |
Msa1068700 | AT4G39890.1 | 42.384 | 151 | 86 | 1 | 9 | 158 | 10 | 160 | 5.16e-39 | 132 |
Msa1068700 | AT2G22290.1 | 42.000 | 150 | 87 | 0 | 9 | 158 | 10 | 159 | 2.07e-38 | 130 |
Msa1068700 | AT5G10260.1 | 42.000 | 150 | 87 | 0 | 9 | 158 | 10 | 159 | 6.82e-38 | 129 |
Msa1068700 | AT5G64990.1 | 43.333 | 150 | 85 | 0 | 9 | 158 | 8 | 157 | 1.19e-37 | 128 |
Msa1068700 | AT4G19640.3 | 45.038 | 131 | 72 | 0 | 10 | 140 | 12 | 142 | 2.72e-37 | 127 |
Msa1068700 | AT4G19640.2 | 45.600 | 125 | 68 | 0 | 10 | 134 | 12 | 136 | 3.94e-36 | 122 |
Msa1068700 | AT3G18820.1 | 42.405 | 158 | 84 | 3 | 8 | 158 | 8 | 165 | 7.61e-36 | 123 |
Msa1068700 | AT5G59150.2 | 49.541 | 109 | 55 | 0 | 50 | 158 | 3 | 111 | 1.06e-35 | 122 |
Msa1068700 | AT1G52280.1 | 41.212 | 165 | 90 | 3 | 1 | 158 | 1 | 165 | 1.39e-35 | 122 |
Msa1068700 | AT5G64990.2 | 41.401 | 157 | 85 | 1 | 9 | 158 | 8 | 164 | 6.13e-35 | 121 |
Msa1068700 | AT1G49300.2 | 41.139 | 158 | 86 | 3 | 8 | 158 | 8 | 165 | 1.50e-34 | 120 |
Msa1068700 | AT1G49300.1 | 41.139 | 158 | 86 | 3 | 8 | 158 | 8 | 165 | 1.50e-34 | 120 |
Msa1068700 | AT3G16100.1 | 41.139 | 158 | 86 | 3 | 8 | 158 | 8 | 165 | 4.53e-34 | 119 |
Msa1068700 | AT2G21880.1 | 39.241 | 158 | 89 | 3 | 8 | 158 | 9 | 166 | 3.94e-33 | 116 |
Msa1068700 | AT4G09720.1 | 41.139 | 158 | 86 | 3 | 8 | 158 | 8 | 165 | 3.08e-32 | 114 |
Msa1068700 | AT1G22740.1 | 38.182 | 165 | 95 | 3 | 1 | 158 | 1 | 165 | 8.40e-32 | 113 |
Msa1068700 | AT4G09720.4 | 38.650 | 163 | 88 | 3 | 8 | 158 | 8 | 170 | 5.76e-30 | 108 |
Msa1068700 | AT4G09720.3 | 37.278 | 169 | 88 | 3 | 8 | 158 | 8 | 176 | 4.76e-29 | 106 |
Msa1068700 | AT5G39620.1 | 37.580 | 157 | 91 | 3 | 9 | 158 | 6 | 162 | 1.02e-26 | 100 |
Msa1068700 | AT2G21880.4 | 40.310 | 129 | 70 | 3 | 37 | 158 | 13 | 141 | 3.73e-25 | 95.5 |
Msa1068700 | AT2G21880.3 | 40.310 | 129 | 70 | 3 | 37 | 158 | 13 | 141 | 3.73e-25 | 95.5 |
Msa1068700 | AT4G09720.6 | 42.636 | 129 | 67 | 3 | 37 | 158 | 3 | 131 | 1.83e-24 | 93.6 |
Msa1068700 | AT4G09720.5 | 42.636 | 129 | 67 | 3 | 37 | 158 | 3 | 131 | 1.83e-24 | 93.6 |
Msa1068700 | AT4G09720.2 | 42.636 | 129 | 67 | 3 | 37 | 158 | 3 | 131 | 1.83e-24 | 93.6 |
Msa1068700 | AT4G35020.1 | 34.356 | 163 | 93 | 6 | 8 | 158 | 6 | 166 | 1.58e-23 | 91.7 |
Msa1068700 | AT4G35020.2 | 34.356 | 163 | 93 | 6 | 8 | 158 | 6 | 166 | 1.58e-23 | 91.7 |
Msa1068700 | AT4G35020.3 | 34.356 | 163 | 93 | 6 | 8 | 158 | 6 | 166 | 1.58e-23 | 91.7 |
Msa1068700 | AT2G21880.2 | 34.177 | 158 | 89 | 4 | 8 | 158 | 9 | 158 | 2.86e-23 | 91.3 |
Msa1068700 | AT3G51300.1 | 34.161 | 161 | 92 | 6 | 10 | 158 | 8 | 166 | 5.17e-23 | 90.5 |
Msa1068700 | AT2G44690.1 | 33.129 | 163 | 95 | 5 | 8 | 158 | 18 | 178 | 9.35e-23 | 90.1 |
Msa1068700 | AT2G17800.2 | 33.742 | 163 | 94 | 6 | 8 | 158 | 6 | 166 | 2.33e-22 | 88.6 |
Msa1068700 | AT2G17800.1 | 33.742 | 163 | 94 | 6 | 8 | 158 | 6 | 166 | 2.33e-22 | 88.6 |
Msa1068700 | AT4G35950.1 | 33.129 | 163 | 95 | 6 | 8 | 158 | 6 | 166 | 9.02e-22 | 87.0 |
Msa1068700 | AT1G75840.1 | 31.288 | 163 | 98 | 5 | 8 | 158 | 6 | 166 | 1.02e-21 | 87.0 |
Msa1068700 | AT5G45970.1 | 31.902 | 163 | 97 | 6 | 8 | 158 | 6 | 166 | 2.38e-21 | 86.3 |
Msa1068700 | AT4G28950.1 | 31.056 | 161 | 99 | 5 | 8 | 158 | 6 | 164 | 3.09e-21 | 85.9 |
Msa1068700 | AT5G55080.1 | 33.117 | 154 | 90 | 5 | 9 | 157 | 14 | 159 | 8.47e-21 | 85.1 |
Msa1068700 | AT1G20090.1 | 34.146 | 123 | 78 | 3 | 8 | 129 | 5 | 125 | 1.20e-20 | 84.3 |
Msa1068700 | AT3G48040.1 | 30.675 | 163 | 99 | 5 | 8 | 158 | 8 | 168 | 2.78e-20 | 83.6 |
Msa1068700 | AT3G48040.2 | 34.146 | 123 | 78 | 3 | 8 | 129 | 8 | 128 | 3.42e-20 | 82.4 |
Msa1068700 | AT5G46025.1 | 45.556 | 90 | 48 | 1 | 70 | 158 | 6 | 95 | 3.83e-20 | 80.5 |
Msa1068700 | AT4G35020.4 | 35.965 | 114 | 70 | 3 | 10 | 122 | 8 | 119 | 2.56e-19 | 79.3 |
Msa1068700 | AT4G35020.5 | 35.965 | 114 | 70 | 3 | 10 | 122 | 8 | 119 | 2.56e-19 | 79.3 |
Msa1068700 | AT5G20020.1 | 30.872 | 149 | 100 | 2 | 9 | 157 | 14 | 159 | 2.79e-19 | 81.3 |
Msa1068700 | AT5G20010.1 | 30.872 | 149 | 100 | 2 | 9 | 157 | 14 | 159 | 2.91e-19 | 81.3 |
Msa1068700 | AT5G62880.2 | 33.333 | 123 | 79 | 3 | 8 | 129 | 8 | 128 | 2.97e-19 | 80.5 |
Msa1068700 | AT5G55190.1 | 30.872 | 149 | 100 | 2 | 9 | 157 | 14 | 159 | 3.00e-19 | 81.3 |
Msa1068700 | AT5G62880.1 | 33.333 | 123 | 79 | 3 | 8 | 129 | 8 | 128 | 6.38e-19 | 80.1 |
Msa1068700 | AT3G49870.2 | 35.625 | 160 | 83 | 7 | 9 | 158 | 1 | 150 | 3.25e-14 | 66.6 |
Msa1068700 | AT3G49870.1 | 35.625 | 160 | 83 | 7 | 9 | 158 | 20 | 169 | 5.71e-14 | 66.2 |
Msa1068700 | AT5G37680.1 | 32.704 | 159 | 89 | 6 | 9 | 158 | 20 | 169 | 7.11e-14 | 66.2 |
Msa1068700 | AT5G67560.1 | 35.625 | 160 | 83 | 7 | 9 | 158 | 20 | 169 | 9.23e-14 | 65.9 |
Msa1068700 | AT3G51290.2 | 33.824 | 136 | 76 | 6 | 35 | 158 | 634 | 767 | 1.95e-13 | 67.4 |
Msa1068700 | AT2G15310.1 | 31.731 | 104 | 63 | 4 | 10 | 113 | 19 | 114 | 7.58e-11 | 58.5 |
Msa1068700 | AT3G22950.1 | 30.159 | 126 | 80 | 4 | 1 | 125 | 12 | 130 | 8.85e-11 | 57.8 |
Msa1068700 | AT3G22950.2 | 30.159 | 126 | 80 | 4 | 1 | 125 | 12 | 130 | 8.85e-11 | 57.8 |
Find 48 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGCACTTGTCTCCATAAA+AGG | 0.231314 | 7_2:-63877051 | None:intergenic |
CAGGCATTTGCAGATGAAAT+AGG | 0.278594 | 7_2:+63877024 | Msa1068700:intron |
CAGCTGGGCAAGAACGATTT+AGG | 0.305104 | 7_2:+63876553 | Msa1068700:CDS |
ACATACGATTTGGAGCTTAA+TGG | 0.308951 | 7_2:-63876325 | None:intergenic |
TTGAGATGATTTGATTTGTA+TGG | 0.367702 | 7_2:-63874434 | None:intergenic |
AAGTGAGGAACATACTATTC+AGG | 0.384451 | 7_2:-63874641 | None:intergenic |
GGTGATCGGCGAGTTGTTGC+CGG | 0.399092 | 7_2:-63874595 | None:intergenic |
GAAAATCCGCACAGTTGAAC+AGG | 0.426213 | 7_2:+63876293 | Msa1068700:intron |
TGATGAGAAACGCGTGGAAA+AGG | 0.435614 | 7_2:-63874484 | None:intergenic |
AATCAGAAGGAATCGGTTGT+TGG | 0.457586 | 7_2:-63874522 | None:intergenic |
GATGAGAAACGCGTGGAAAA+GGG | 0.488049 | 7_2:-63874483 | None:intergenic |
TTGATTGGAGACTCTGGTGT+TGG | 0.492888 | 7_2:+63875216 | Msa1068700:CDS |
AATGTTAACAAGCTCTTGGT+TGG | 0.494106 | 7_2:+63876793 | Msa1068700:CDS |
TGATAATGTTAACAAGCTCT+TGG | 0.495654 | 7_2:+63876789 | Msa1068700:CDS |
AGGGAGAGTTCGTCGGAGAT+TGG | 0.497417 | 7_2:-63874572 | None:intergenic |
AGCTACTACCGTGGGGCACA+TGG | 0.500719 | 7_2:+63876588 | Msa1068700:CDS |
CATATGTAGTGGGATACAGC+TGG | 0.519499 | 7_2:+63876537 | Msa1068700:intron |
CTCGAGAAATCAGAAGGAAT+CGG | 0.534082 | 7_2:-63874529 | None:intergenic |
GGAGATTGGTGCAGTAGCGG+TGG | 0.534801 | 7_2:-63874558 | None:intergenic |
TGAGATGATTTGATTTGTAT+GGG | 0.538464 | 7_2:-63874433 | None:intergenic |
TGCCCCACGGTAGTAGCTAC+TGG | 0.542749 | 7_2:-63876583 | None:intergenic |
GACAGCTACATAAGCACCAT+TGG | 0.547410 | 7_2:+63876178 | Msa1068700:CDS |
TTCATGTCTGAAAGAGTGAA+AGG | 0.553749 | 7_2:-63874617 | None:intergenic |
CGATTCCTTCTGATTTCTCG+AGG | 0.554834 | 7_2:+63874530 | Msa1068700:five_prime_UTR |
GTGGAAAAGGGGATTAAATA+CGG | 0.557298 | 7_2:-63874471 | None:intergenic |
ATCCGCACAGTTGAACAGGA+TGG | 0.566980 | 7_2:+63876297 | Msa1068700:CDS |
GATGATTTGATTTGTATGGG+TGG | 0.575103 | 7_2:-63874430 | None:intergenic |
TTACAGCAAATCTGAGCAGA+AGG | 0.577201 | 7_2:-63875248 | None:intergenic |
TGAAAGAGTGAAAGGGTGAT+CGG | 0.581681 | 7_2:-63874609 | None:intergenic |
GAGATTGGTGCAGTAGCGGT+GGG | 0.590006 | 7_2:-63874557 | None:intergenic |
TCCCATCCTGTTCAACTGTG+CGG | 0.594596 | 7_2:-63876299 | None:intergenic |
TTGCCGGAGGGAGAGTTCGT+CGG | 0.597494 | 7_2:-63874579 | None:intergenic |
TCATGTCTGAAAGAGTGAAA+GGG | 0.603002 | 7_2:-63874616 | None:intergenic |
ATGAGAAACGCGTGGAAAAG+GGG | 0.607847 | 7_2:-63874482 | None:intergenic |
GTCGGAGATTGGTGCAGTAG+CGG | 0.610962 | 7_2:-63874561 | None:intergenic |
ACTTACAAAATCAACTCCAA+TGG | 0.612564 | 7_2:-63876194 | None:intergenic |
ATATGTAGTGGGATACAGCT+GGG | 0.616758 | 7_2:+63876538 | Msa1068700:intron |
GCTTCAATAATGTGAAGCAA+TGG | 0.626631 | 7_2:+63876740 | Msa1068700:CDS |
GATCGGCGAGTTGTTGCCGG+AGG | 0.627251 | 7_2:-63874592 | None:intergenic |
GTTAACCTCGAGAAATCAGA+AGG | 0.628467 | 7_2:-63874535 | None:intergenic |
TCACCAGTAGCTACTACCGT+GGG | 0.632543 | 7_2:+63876580 | Msa1068700:CDS |
TCTCCGACGAACTCTCCCTC+CGG | 0.636987 | 7_2:+63874576 | Msa1068700:five_prime_UTR |
CAATGATTCCATGTGCCCCA+CGG | 0.637566 | 7_2:-63876596 | None:intergenic |
ATCACCAGTAGCTACTACCG+TGG | 0.643184 | 7_2:+63876579 | Msa1068700:CDS |
ATCGGCGAGTTGTTGCCGGA+GGG | 0.654115 | 7_2:-63874591 | None:intergenic |
TTGATATGATGAGAAACGCG+TGG | 0.686863 | 7_2:-63874490 | None:intergenic |
TAACATTATCACTAGCATAG+CGG | 0.731455 | 7_2:-63876777 | None:intergenic |
CACCAGTAGCTACTACCGTG+GGG | 0.776894 | 7_2:+63876581 | Msa1068700:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAATTAAGATTTTACAAT+TGG | + | chr7_2:63875060-63875079 | Msa1068700:intron | 10.0% |
!!! | AAAATTAAGATTTTACAATT+GGG | + | chr7_2:63875061-63875080 | Msa1068700:intron | 10.0% |
!! | ATTCAATTATTTATAAACAA+TGG | + | chr7_2:63875731-63875750 | Msa1068700:intron | 10.0% |
!! | AAATAAAAATAAAAATGCAA+GGG | - | chr7_2:63876890-63876909 | None:intergenic | 10.0% |
!! | AAAATAAAAATAAAAATGCA+AGG | - | chr7_2:63876891-63876910 | None:intergenic | 10.0% |
!! | AAACATAAAAAAAACGTAAA+AGG | - | chr7_2:63874720-63874739 | None:intergenic | 15.0% |
!! | AACATATATAATTCAATCTA+GGG | - | chr7_2:63874852-63874871 | None:intergenic | 15.0% |
!! | TAACATATATAATTCAATCT+AGG | - | chr7_2:63874853-63874872 | None:intergenic | 15.0% |
!! | TTGAATTATATATGTTAATC+AGG | + | chr7_2:63874856-63874875 | Msa1068700:intron | 15.0% |
!! | ATGAGATAATAAATAGTTTA+GGG | - | chr7_2:63875560-63875579 | None:intergenic | 15.0% |
!! | AATGAGATAATAAATAGTTT+AGG | - | chr7_2:63875561-63875580 | None:intergenic | 15.0% |
!!! | ATTAATTATTGTTTTGTCTT+GGG | - | chr7_2:63875610-63875629 | None:intergenic | 15.0% |
!! | AACAATAATTAATGTTGTAT+TGG | + | chr7_2:63875617-63875636 | Msa1068700:intron | 15.0% |
!!! | AACTTTTTTTTTAATCTTGT+TGG | + | chr7_2:63876411-63876430 | Msa1068700:intron | 15.0% |
!! | AATAAAAATAAAAATGCAAG+GGG | - | chr7_2:63876889-63876908 | None:intergenic | 15.0% |
!! | AGAAAAACATAATATAGATA+AGG | - | chr7_2:63877000-63877019 | None:intergenic | 15.0% |
!!! | ATATTATGTTTTTCTTTAAC+AGG | + | chr7_2:63877005-63877024 | Msa1068700:intron | 15.0% |
!! | AGAAAATAAAAAACGAATCA+AGG | - | chr7_2:63874686-63874705 | None:intergenic | 20.0% |
!!! | TTTTTATGTTTTCTCTCAAA+AGG | + | chr7_2:63874729-63874748 | Msa1068700:intron | 20.0% |
!!! | TTTTATGTTTTCTCTCAAAA+GGG | + | chr7_2:63874730-63874749 | Msa1068700:intron | 20.0% |
!!! | TTAATTTGGTTTATATAAGC+TGG | + | chr7_2:63874759-63874778 | Msa1068700:intron | 20.0% |
!!! | TAATTTGGTTTATATAAGCT+GGG | + | chr7_2:63874760-63874779 | Msa1068700:intron | 20.0% |
!!! | TTAATTATTGTTTTGTCTTG+GGG | - | chr7_2:63875609-63875628 | None:intergenic | 20.0% |
!!! | CATTAATTATTGTTTTGTCT+TGG | - | chr7_2:63875611-63875630 | None:intergenic | 20.0% |
!! | TTTGAAAACAACAAGTTAAT+AGG | + | chr7_2:63875642-63875661 | Msa1068700:intron | 20.0% |
!!! | TTAAAAAGAAGTATGTGTTT+TGG | + | chr7_2:63875989-63876008 | Msa1068700:intron | 20.0% |
!!! | TGAGATGATTTGATTTGTAT+GGG | - | chr7_2:63874436-63874455 | None:intergenic | 25.0% |
!!! | TTGAGATGATTTGATTTGTA+TGG | - | chr7_2:63874437-63874456 | None:intergenic | 25.0% |
! | CATCTCTTATAAATCAACAA+GGG | - | chr7_2:63874967-63874986 | None:intergenic | 25.0% |
! | ACATCTCTTATAAATCAACA+AGG | - | chr7_2:63874968-63874987 | None:intergenic | 25.0% |
!!! | AGCTTTTGTTTATAGATCTT+TGG | + | chr7_2:63875034-63875053 | Msa1068700:intron | 25.0% |
! | TGATTTCATGTTGATATATG+TGG | + | chr7_2:63875093-63875112 | Msa1068700:intron | 25.0% |
! | ACAACATTACACTATAGTAT+CGG | - | chr7_2:63875336-63875355 | None:intergenic | 25.0% |
! | TACTATAGTGTAATGTTGTA+TGG | + | chr7_2:63875337-63875356 | Msa1068700:intron | 25.0% |
!! | TGTTGTATGGTTTTCATTTT+CGG | + | chr7_2:63875350-63875369 | Msa1068700:intron | 25.0% |
! | AATTAACTCAAGTGGAAATA+AGG | - | chr7_2:63875380-63875399 | None:intergenic | 25.0% |
! | GATAAAACAATTAACTCAAG+TGG | - | chr7_2:63875388-63875407 | None:intergenic | 25.0% |
! | ACAACAATAACTAAAAGGAA+CGG | - | chr7_2:63875471-63875490 | None:intergenic | 25.0% |
!!! | TTCCTTTTAGTTATTGTTGT+AGG | + | chr7_2:63875471-63875490 | Msa1068700:intron | 25.0% |
!!! | TCCTTTTAGTTATTGTTGTA+GGG | + | chr7_2:63875472-63875491 | Msa1068700:intron | 25.0% |
! | ATTTATTATCTCATTCCACA+TGG | + | chr7_2:63875566-63875585 | Msa1068700:intron | 25.0% |
!!! | TAATTATTGTTTTGTCTTGG+GGG | - | chr7_2:63875608-63875627 | None:intergenic | 25.0% |
! | AAGTGACTAGTAAAAATGAA+CGG | + | chr7_2:63875683-63875702 | Msa1068700:intron | 25.0% |
! | AATAAATCAATAGTTGTGCT+TGG | + | chr7_2:63875798-63875817 | Msa1068700:intron | 25.0% |
! | CTTTACTTTGAACTAGAAAA+TGG | + | chr7_2:63875898-63875917 | Msa1068700:intron | 25.0% |
!!! | AACATTAAGTTTTATGCTAC+AGG | + | chr7_2:63876141-63876160 | Msa1068700:intron | 25.0% |
! | ACAATCATATACATACGATT+TGG | - | chr7_2:63876338-63876357 | None:intergenic | 25.0% |
CATGAAAACTCAAAAACACA+AGG | - | chr7_2:63874895-63874914 | None:intergenic | 30.0% | |
TTCATGTTGATATATGTGGA+TGG | + | chr7_2:63875097-63875116 | Msa1068700:intron | 30.0% | |
! | CTGTTTAAGCTTCTTTTGAT+TGG | + | chr7_2:63875201-63875220 | Msa1068700:CDS | 30.0% |
!! | CTGCTTGTTGTTTATTATGT+TGG | + | chr7_2:63875288-63875307 | Msa1068700:intron | 30.0% |
TTATGTTGGATACTCTTGTT+TGG | + | chr7_2:63875302-63875321 | Msa1068700:intron | 30.0% | |
! | AAGGCTTCTAATTGTTACTT+GGG | - | chr7_2:63875414-63875433 | None:intergenic | 30.0% |
AAAGGCTTCTAATTGTTACT+TGG | - | chr7_2:63875415-63875434 | None:intergenic | 30.0% | |
AAGTAACAATTAGAAGCCTT+TGG | + | chr7_2:63875414-63875433 | Msa1068700:intron | 30.0% | |
AGTAACAATTAGAAGCCTTT+GGG | + | chr7_2:63875415-63875434 | Msa1068700:intron | 30.0% | |
ACCCTACAACAATAACTAAA+AGG | - | chr7_2:63875476-63875495 | None:intergenic | 30.0% | |
!! | AATTATTGTTTTGTCTTGGG+GGG | - | chr7_2:63875607-63875626 | None:intergenic | 30.0% |
AAATGAACGGATGTAGTAAT+TGG | + | chr7_2:63875696-63875715 | Msa1068700:intron | 30.0% | |
CTACCTGTTTAATTCTTTGT+TGG | + | chr7_2:63875754-63875773 | Msa1068700:intron | 30.0% | |
TTAATCAGACATTCTCCATA+AGG | - | chr7_2:63875924-63875943 | None:intergenic | 30.0% | |
GATAGTTACCAACCTAAAAA+AGG | + | chr7_2:63876041-63876060 | Msa1068700:intron | 30.0% | |
!!! | CCATTTTACCTTTTTTAGGT+TGG | - | chr7_2:63876052-63876071 | None:intergenic | 30.0% |
CCAACCTAAAAAAGGTAAAA+TGG | + | chr7_2:63876049-63876068 | Msa1068700:intron | 30.0% | |
!! | GAAGCCATTTTACCTTTTTT+AGG | - | chr7_2:63876056-63876075 | None:intergenic | 30.0% |
CTTTGTATGTTAGTTGATCT+TGG | + | chr7_2:63876077-63876096 | Msa1068700:intron | 30.0% | |
ACTTACAAAATCAACTCCAA+TGG | - | chr7_2:63876197-63876216 | None:intergenic | 30.0% | |
TGATCCAATTTCATATGTAG+TGG | + | chr7_2:63876526-63876545 | Msa1068700:intron | 30.0% | |
GATCCAATTTCATATGTAGT+GGG | + | chr7_2:63876527-63876546 | Msa1068700:intron | 30.0% | |
TATCCCACTACATATGAAAT+TGG | - | chr7_2:63876533-63876552 | None:intergenic | 30.0% | |
TTTATATTTCCCGACTTTGT+TGG | + | chr7_2:63876650-63876669 | Msa1068700:intron | 30.0% | |
TAACATTATCACTAGCATAG+CGG | - | chr7_2:63876780-63876799 | None:intergenic | 30.0% | |
! | TGATAATGTTAACAAGCTCT+TGG | + | chr7_2:63876789-63876808 | Msa1068700:CDS | 30.0% |
TAGATAAGGATAGCTGAAAT+AGG | - | chr7_2:63876986-63877005 | None:intergenic | 30.0% | |
! | TGAAATAGGCATACCTTTTA+TGG | + | chr7_2:63877038-63877057 | Msa1068700:CDS | 30.0% |
!! | GATGATTTGATTTGTATGGG+TGG | - | chr7_2:63874433-63874452 | None:intergenic | 35.0% |
GTGGAAAAGGGGATTAAATA+CGG | - | chr7_2:63874474-63874493 | None:intergenic | 35.0% | |
TCATGTCTGAAAGAGTGAAA+GGG | - | chr7_2:63874619-63874638 | None:intergenic | 35.0% | |
TTCATGTCTGAAAGAGTGAA+AGG | - | chr7_2:63874620-63874639 | None:intergenic | 35.0% | |
AAGTGAGGAACATACTATTC+AGG | - | chr7_2:63874644-63874663 | None:intergenic | 35.0% | |
! | ATGTTTTCTCTCAAAAGGGT+TGG | + | chr7_2:63874734-63874753 | Msa1068700:intron | 35.0% |
!! | CAAAAGGGTTGGTGTTAATT+TGG | + | chr7_2:63874745-63874764 | Msa1068700:intron | 35.0% |
! | CAATCTAGGGTTAGAATTTC+AGG | - | chr7_2:63874839-63874858 | None:intergenic | 35.0% |
CACTAACAAGATCAGATTCA+GGG | - | chr7_2:63874942-63874961 | None:intergenic | 35.0% | |
TCACTAACAAGATCAGATTC+AGG | - | chr7_2:63874943-63874962 | None:intergenic | 35.0% | |
CAATAACTAAAAGGAACGGA+TGG | - | chr7_2:63875467-63875486 | None:intergenic | 35.0% | |
CCTCCAACAAAGAATTAAAC+AGG | - | chr7_2:63875760-63875779 | None:intergenic | 35.0% | |
CCTGTTTAATTCTTTGTTGG+AGG | + | chr7_2:63875757-63875776 | Msa1068700:intron | 35.0% | |
ACTTTCAACAATATCCCGAA+AGG | - | chr7_2:63875852-63875871 | None:intergenic | 35.0% | |
GGATATTGTTGAAAGTGATG+AGG | + | chr7_2:63875856-63875875 | Msa1068700:intron | 35.0% | |
TTCAAAGTAAAGCTCACAAC+AGG | - | chr7_2:63875890-63875909 | None:intergenic | 35.0% | |
! | TGAACTAGAAAATGGCCTTA+TGG | + | chr7_2:63875906-63875925 | Msa1068700:intron | 35.0% |
!!! | AAAGAAGTATGTGTTTTGGC+TGG | + | chr7_2:63875993-63876012 | Msa1068700:intron | 35.0% |
! | ACATACGATTTGGAGCTTAA+TGG | - | chr7_2:63876328-63876347 | None:intergenic | 35.0% |
GATAAGAAACAATGTCAACG+TGG | - | chr7_2:63876498-63876517 | None:intergenic | 35.0% | |
GCTTTACTAACTGGTTATTC+TGG | + | chr7_2:63876686-63876705 | Msa1068700:intron | 35.0% | |
GCTTCAATAATGTGAAGCAA+TGG | + | chr7_2:63876740-63876759 | Msa1068700:CDS | 35.0% | |
AATGTTAACAAGCTCTTGGT+TGG | + | chr7_2:63876793-63876812 | Msa1068700:CDS | 35.0% | |
TTTGCACTTGTCTCCATAAA+AGG | - | chr7_2:63877054-63877073 | None:intergenic | 35.0% | |
! | TTTTATGGAGACAAGTGCAA+AGG | + | chr7_2:63877053-63877072 | Msa1068700:CDS | 35.0% |
TTGATATGATGAGAAACGCG+TGG | - | chr7_2:63874493-63874512 | None:intergenic | 40.0% | |
AATCAGAAGGAATCGGTTGT+TGG | - | chr7_2:63874525-63874544 | None:intergenic | 40.0% | |
CTCGAGAAATCAGAAGGAAT+CGG | - | chr7_2:63874532-63874551 | None:intergenic | 40.0% | |
GTTAACCTCGAGAAATCAGA+AGG | - | chr7_2:63874538-63874557 | None:intergenic | 40.0% | |
TGAAAGAGTGAAAGGGTGAT+CGG | - | chr7_2:63874612-63874631 | None:intergenic | 40.0% | |
TCGAGAAGGAATAGAAAGTG+AGG | - | chr7_2:63874659-63874678 | None:intergenic | 40.0% | |
CGAATCAAGGAAAATCGAGA+AGG | - | chr7_2:63874673-63874692 | None:intergenic | 40.0% | |
!! | CTTCTTTTGATTGGAGACTC+TGG | + | chr7_2:63875210-63875229 | Msa1068700:CDS | 40.0% |
TTACAGCAAATCTGAGCAGA+AGG | - | chr7_2:63875251-63875270 | None:intergenic | 40.0% | |
AGAGAGAGAGAAATACCATG+TGG | - | chr7_2:63875584-63875603 | None:intergenic | 40.0% | |
! | TGGAGGTTTTTGTGTAGTTC+TGG | + | chr7_2:63875774-63875793 | Msa1068700:intron | 40.0% |
GTTGTGCTTGGAACTTTATG+AGG | + | chr7_2:63875810-63875829 | Msa1068700:intron | 40.0% | |
TGCTTGGAACTTTATGAGGT+TGG | + | chr7_2:63875814-63875833 | Msa1068700:intron | 40.0% | |
GCTTGGAACTTTATGAGGTT+GGG | + | chr7_2:63875815-63875834 | Msa1068700:intron | 40.0% | |
CTTGGAACTTTATGAGGTTG+GGG | + | chr7_2:63875816-63875835 | Msa1068700:intron | 40.0% | |
TTGGAACTTTATGAGGTTGG+GGG | + | chr7_2:63875817-63875836 | Msa1068700:intron | 40.0% | |
! | TGTTAGTTGATCTTGGTTCG+TGG | + | chr7_2:63876084-63876103 | Msa1068700:intron | 40.0% |
! | ATATGTAGTGGGATACAGCT+GGG | + | chr7_2:63876538-63876557 | Msa1068700:intron | 40.0% |
GGAATCATTGTGCGTAATGA+TGG | + | chr7_2:63876609-63876628 | Msa1068700:intron | 40.0% | |
AAGGAAAGACCAACAAAGTC+GGG | - | chr7_2:63876662-63876681 | None:intergenic | 40.0% | |
CAAGGAAAGACCAACAAAGT+CGG | - | chr7_2:63876663-63876682 | None:intergenic | 40.0% | |
TCCTTGCATGCTTTACTAAC+TGG | + | chr7_2:63876677-63876696 | Msa1068700:intron | 40.0% | |
ACCAGTTAGTAAAGCATGCA+AGG | - | chr7_2:63876681-63876700 | None:intergenic | 40.0% | |
CAGGCATTTGCAGATGAAAT+AGG | + | chr7_2:63877024-63877043 | Msa1068700:intron | 40.0% | |
ATGAGAAACGCGTGGAAAAG+GGG | - | chr7_2:63874485-63874504 | None:intergenic | 45.0% | |
GATGAGAAACGCGTGGAAAA+GGG | - | chr7_2:63874486-63874505 | None:intergenic | 45.0% | |
TGATGAGAAACGCGTGGAAA+AGG | - | chr7_2:63874487-63874506 | None:intergenic | 45.0% | |
CGATTCCTTCTGATTTCTCG+AGG | + | chr7_2:63874530-63874549 | Msa1068700:five_prime_UTR | 45.0% | |
GTGATAGAGCTGATGTGTTG+TGG | + | chr7_2:63875158-63875177 | Msa1068700:intron | 45.0% | |
TTGATTGGAGACTCTGGTGT+TGG | + | chr7_2:63875216-63875235 | Msa1068700:CDS | 45.0% | |
TGGAACTTTATGAGGTTGGG+GGG | + | chr7_2:63875818-63875837 | Msa1068700:intron | 45.0% | |
TGGGGGGAGATAAAACCTTT+CGG | + | chr7_2:63875834-63875853 | Msa1068700:intron | 45.0% | |
TGGTTCGTGGAGATGATATG+TGG | + | chr7_2:63876097-63876116 | Msa1068700:intron | 45.0% | |
GACAGCTACATAAGCACCAT+TGG | + | chr7_2:63876178-63876197 | Msa1068700:CDS | 45.0% | |
GAAAATCCGCACAGTTGAAC+AGG | + | chr7_2:63876293-63876312 | Msa1068700:intron | 45.0% | |
! | CATATGTAGTGGGATACAGC+TGG | + | chr7_2:63876537-63876556 | Msa1068700:intron | 45.0% |
AACCAGTGCAACACACCCAA+AGG | - | chr7_2:63875433-63875452 | None:intergenic | 50.0% | |
GGGGGGAGATAAAACCTTTC+GGG | + | chr7_2:63875835-63875854 | Msa1068700:intron | 50.0% | |
ATCCGCACAGTTGAACAGGA+TGG | + | chr7_2:63876297-63876316 | Msa1068700:CDS | 50.0% | |
TCCGCACAGTTGAACAGGAT+GGG | + | chr7_2:63876298-63876317 | Msa1068700:CDS | 50.0% | |
TCCCATCCTGTTCAACTGTG+CGG | - | chr7_2:63876302-63876321 | None:intergenic | 50.0% | |
CAGCTGGGCAAGAACGATTT+AGG | + | chr7_2:63876553-63876572 | Msa1068700:CDS | 50.0% | |
ATCACCAGTAGCTACTACCG+TGG | + | chr7_2:63876579-63876598 | Msa1068700:CDS | 50.0% | |
TCACCAGTAGCTACTACCGT+GGG | + | chr7_2:63876580-63876599 | Msa1068700:CDS | 50.0% | |
CAATGATTCCATGTGCCCCA+CGG | - | chr7_2:63876599-63876618 | None:intergenic | 50.0% | |
! | GTGCTTGCATAGTGCTGTTG+AGG | + | chr7_2:63876942-63876961 | Msa1068700:intron | 50.0% |
GAGATTGGTGCAGTAGCGGT+GGG | - | chr7_2:63874560-63874579 | None:intergenic | 55.0% | |
GTCGGAGATTGGTGCAGTAG+CGG | - | chr7_2:63874564-63874583 | None:intergenic | 55.0% | |
AGGGAGAGTTCGTCGGAGAT+TGG | - | chr7_2:63874575-63874594 | None:intergenic | 55.0% | |
AGCCTTTGGGTGTGTTGCAC+TGG | + | chr7_2:63875428-63875447 | Msa1068700:intron | 55.0% | |
CACCAGTAGCTACTACCGTG+GGG | + | chr7_2:63876581-63876600 | Msa1068700:CDS | 55.0% | |
GGAGATTGGTGCAGTAGCGG+TGG | - | chr7_2:63874561-63874580 | None:intergenic | 60.0% | |
TCTCCGACGAACTCTCCCTC+CGG | + | chr7_2:63874576-63874595 | Msa1068700:five_prime_UTR | 60.0% | |
TTGCCGGAGGGAGAGTTCGT+CGG | - | chr7_2:63874582-63874601 | None:intergenic | 60.0% | |
ATCGGCGAGTTGTTGCCGGA+GGG | - | chr7_2:63874594-63874613 | None:intergenic | 60.0% | |
GGTGATCGGCGAGTTGTTGC+CGG | - | chr7_2:63874598-63874617 | None:intergenic | 60.0% | |
TGCCCCACGGTAGTAGCTAC+TGG | - | chr7_2:63876586-63876605 | None:intergenic | 60.0% | |
AGCTACTACCGTGGGGCACA+TGG | + | chr7_2:63876588-63876607 | Msa1068700:CDS | 60.0% | |
GATCGGCGAGTTGTTGCCGG+AGG | - | chr7_2:63874595-63874614 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 63874426 | 63877089 | 63874426 | ID=Msa1068700;Name=Msa1068700 |
chr7_2 | mRNA | 63874426 | 63877089 | 63874426 | ID=Msa1068700-mRNA-1;Parent=Msa1068700;Name=Msa1068700-mRNA-1;_AED=0.13;_eAED=0.13;_QI=209|1|0.85|1|0.66|0.57|7|0|158 |
chr7_2 | exon | 63874426 | 63874648 | 63874426 | ID=Msa1068700-mRNA-1:exon:13229;Parent=Msa1068700-mRNA-1 |
chr7_2 | exon | 63875194 | 63875266 | 63875194 | ID=Msa1068700-mRNA-1:exon:13230;Parent=Msa1068700-mRNA-1 |
chr7_2 | exon | 63876163 | 63876210 | 63876163 | ID=Msa1068700-mRNA-1:exon:13231;Parent=Msa1068700-mRNA-1 |
chr7_2 | exon | 63876294 | 63876341 | 63876294 | ID=Msa1068700-mRNA-1:exon:13232;Parent=Msa1068700-mRNA-1 |
chr7_2 | exon | 63876546 | 63876617 | 63876546 | ID=Msa1068700-mRNA-1:exon:13233;Parent=Msa1068700-mRNA-1 |
chr7_2 | exon | 63876712 | 63876867 | 63876712 | ID=Msa1068700-mRNA-1:exon:13234;Parent=Msa1068700-mRNA-1 |
chr7_2 | exon | 63877027 | 63877089 | 63877027 | ID=Msa1068700-mRNA-1:exon:13235;Parent=Msa1068700-mRNA-1 |
chr7_2 | five_prime_UTR | 63874426 | 63874634 | 63874426 | ID=Msa1068700-mRNA-1:five_prime_utr;Parent=Msa1068700-mRNA-1 |
chr7_2 | CDS | 63874635 | 63874648 | 63874635 | ID=Msa1068700-mRNA-1:cds;Parent=Msa1068700-mRNA-1 |
chr7_2 | CDS | 63875194 | 63875266 | 63875194 | ID=Msa1068700-mRNA-1:cds;Parent=Msa1068700-mRNA-1 |
chr7_2 | CDS | 63876163 | 63876210 | 63876163 | ID=Msa1068700-mRNA-1:cds;Parent=Msa1068700-mRNA-1 |
chr7_2 | CDS | 63876294 | 63876341 | 63876294 | ID=Msa1068700-mRNA-1:cds;Parent=Msa1068700-mRNA-1 |
chr7_2 | CDS | 63876546 | 63876617 | 63876546 | ID=Msa1068700-mRNA-1:cds;Parent=Msa1068700-mRNA-1 |
chr7_2 | CDS | 63876712 | 63876867 | 63876712 | ID=Msa1068700-mRNA-1:cds;Parent=Msa1068700-mRNA-1 |
chr7_2 | CDS | 63877027 | 63877089 | 63877027 | ID=Msa1068700-mRNA-1:cds;Parent=Msa1068700-mRNA-1 |
Gene Sequence |
Protein sequence |