AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0481770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481770 MtrunA17_Chr7g0267181 96.053 228 9 0 204 431 1 228 3.28e-164 461
Msa0481770 MtrunA17_Chr7g0267181 38.389 211 110 6 4 198 2 208 7.28e-30 115
Msa0481770 MtrunA17_Chr7g0267231 87.324 213 16 2 1 202 1 213 1.32e-117 342
Msa0481770 MtrunA17_Chr7g0267231 40.611 229 124 4 206 430 5 225 8.75e-49 166
Msa0481770 MtrunA17_Chr7g0267281 77.725 211 36 2 1 200 1 211 2.86e-114 334
Msa0481770 MtrunA17_Chr7g0267281 45.652 230 113 6 205 430 4 225 3.09e-63 203
Msa0481770 MtrunA17_Chr7g0267291 66.190 210 59 3 6 203 2 211 1.07e-90 277
Msa0481770 MtrunA17_Chr7g0267291 47.418 213 102 5 209 416 4 211 8.34e-58 192
Msa0481770 MtrunA17_Chr7g0267301 65.877 211 59 4 4 201 3 213 2.24e-85 260
Msa0481770 MtrunA17_Chr7g0267301 43.721 215 108 5 209 416 7 215 6.14e-51 171
Msa0481770 MtrunA17_Chr4g0067041 49.153 236 106 5 208 430 4 238 1.15e-68 218
Msa0481770 MtrunA17_Chr4g0067041 35.683 227 118 6 1 203 1 223 1.06e-34 129
Msa0481770 MtrunA17_Chr1g0177471 52.282 241 92 4 209 430 5 241 1.04e-63 205
Msa0481770 MtrunA17_Chr1g0177471 39.485 233 104 7 1 203 1 226 2.48e-32 123
Msa0481770 MtrunA17_Chr1g0177521 46.701 197 89 4 19 202 8 201 3.51e-35 129
Msa0481770 MtrunA17_Chr1g0177521 35.377 212 127 3 220 427 8 213 1.16e-23 98.6
Msa0481770 MtrunA17_Chr6g0479071 41.341 179 99 5 237 410 2 179 5.02e-32 121
Msa0481770 MtrunA17_Chr6g0479071 30.220 182 103 9 36 197 2 179 4.67e-14 71.2
Msa0481770 MtrunA17_Chr6g0478671 40.449 178 90 7 238 410 11 177 2.85e-31 119
Msa0481770 MtrunA17_Chr6g0478671 31.579 171 104 6 36 197 11 177 6.24e-14 70.5
Msa0481770 MtrunA17_Chr6g0479081 39.665 179 102 5 237 410 2 179 3.52e-29 113
Msa0481770 MtrunA17_Chr6g0479081 29.121 182 105 9 36 197 2 179 6.76e-13 67.8
Msa0481770 MtrunA17_Chr6g0478661 40.782 179 89 6 237 410 8 174 4.56e-25 102
Msa0481770 MtrunA17_Chr2g0280851 34.228 149 96 2 257 405 35 181 2.32e-23 97.1
Msa0481770 MtrunA17_Chr5g0440571 30.303 198 126 5 219 408 41 234 3.83e-19 86.7
Msa0481770 MtrunA17_Chr1g0177531 50.000 106 45 2 32 130 11 115 4.77e-18 80.1
Msa0481770 MtrunA17_Chr1g0177531 39.024 123 67 4 238 357 13 130 4.71e-11 60.5
Msa0481770 MtrunA17_Chr7g0267321 30.921 152 102 3 243 393 169 318 9.49e-16 78.2
Msa0481770 MtrunA17_Chr2g0321801 27.647 170 111 3 246 404 19 187 4.07e-15 74.3
Msa0481770 MtrunA17_Chr1g0206161 26.036 169 121 3 245 412 50 215 1.39e-14 72.8
Msa0481770 MtrunA17_Chr1g0177571 27.222 180 127 4 242 419 16 193 1.70e-14 72.4
Msa0481770 MtrunA17_Chr4g0050801 50.000 62 29 1 370 429 2 63 1.86e-14 68.2
Msa0481770 MtrunA17_Chr3g0109121 32.667 150 98 3 260 408 83 230 3.93e-14 72.0
Msa0481770 MtrunA17_Chr2g0330241 29.944 177 117 5 258 430 77 250 4.29e-13 68.9
Msa0481770 MtrunA17_Chr7g0276371 26.396 197 141 4 219 413 18 212 7.51e-13 67.8
Msa0481770 MtrunA17_Chr5g0433201 33.333 147 95 3 263 408 97 241 7.53e-13 68.6
Msa0481770 MtrunA17_Chr3g0127951 30.579 121 82 2 294 413 72 191 2.03e-12 66.2
Msa0481770 MtrunA17_Chr2g0281401 27.568 185 122 5 223 404 64 239 2.43e-12 67.0
Msa0481770 MtrunA17_Chr3g0118371 27.778 162 113 4 249 408 73 232 1.45e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481770 AT2G35980.1 50.655 229 108 4 204 430 1 226 9.60e-75 233
Msa0481770 AT2G35980.1 37.745 204 115 5 5 197 4 206 1.86e-42 149
Msa0481770 AT3G11650.1 45.082 244 111 7 204 430 1 238 3.52e-62 201
Msa0481770 AT3G11650.1 34.335 233 122 5 4 209 3 231 5.72e-38 138
Msa0481770 AT5G06320.1 47.391 230 109 4 210 430 4 230 1.99e-61 199
Msa0481770 AT5G06320.1 37.611 226 110 7 1 203 1 218 8.25e-36 132
Msa0481770 AT2G35460.1 40.598 234 125 2 210 430 5 237 3.25e-59 194
Msa0481770 AT2G35460.1 34.247 219 119 5 9 202 5 223 1.28e-35 132
Msa0481770 AT1G32270.2 38.961 154 93 1 267 420 1 153 1.88e-28 115
Msa0481770 AT1G32270.2 33.117 154 97 4 64 212 9 161 6.69e-13 70.1
Msa0481770 AT1G32270.1 38.961 154 93 1 267 420 1 153 1.04e-27 114
Msa0481770 AT1G32270.1 33.117 154 97 4 64 212 9 161 1.32e-12 69.7
Msa0481770 AT3G11660.1 31.677 161 107 3 246 404 18 177 4.23e-20 88.6
Msa0481770 AT3G52470.1 31.977 172 113 4 250 419 23 192 1.77e-19 87.0
Msa0481770 AT5G53730.1 27.907 172 121 3 259 428 40 210 3.23e-19 86.3
Msa0481770 AT5G22870.1 27.419 186 126 4 246 430 29 206 3.30e-17 80.5
Msa0481770 AT4G05220.1 26.786 168 119 3 242 408 42 206 4.12e-17 80.5
Msa0481770 AT1G61760.1 24.405 168 123 3 242 408 40 204 6.44e-17 80.1
Msa0481770 AT3G44220.1 28.409 176 121 4 246 418 20 193 9.72e-16 76.3
Msa0481770 AT5G06330.1 27.411 197 138 4 233 426 7 201 1.40e-15 75.9
Msa0481770 AT2G35960.1 29.932 147 100 3 260 405 35 179 1.44e-15 75.9
Msa0481770 AT4G09590.1 28.662 157 109 3 250 405 26 180 2.28e-15 75.1
Msa0481770 AT4G01410.1 27.011 174 116 4 239 411 45 208 7.92e-14 71.2
Msa0481770 AT2G35970.1 28.025 157 110 3 250 405 26 180 1.11e-13 70.5
Msa0481770 AT2G27080.1 24.651 215 152 5 219 430 49 256 2.05e-13 70.5
Msa0481770 AT2G27080.2 24.651 215 152 5 219 430 49 256 2.05e-13 70.5
Msa0481770 AT5G36970.1 25.664 226 154 6 186 408 12 226 8.73e-13 68.6
Msa0481770 AT5G22200.1 29.078 141 97 3 265 404 43 181 6.54e-12 65.1
Msa0481770 AT1G65690.1 26.797 153 108 4 247 396 70 221 6.30e-11 63.2

Find 96 sgRNAs with CRISPR-Local

Find 597 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACTTTCTCACCCTTAA+AGG 0.153920 3_3:-88133249 None:intergenic
CTTGTTGGTGGAGGGATTGC+TGG 0.156594 3_3:-88132849 None:intergenic
GATCACTTCTCTTCTTAAAT+TGG 0.196139 3_3:-88123481 None:intergenic
TGAGGATGAGTTTGAATATT+AGG 0.216646 3_3:-88132932 None:intergenic
TTACGTGTTCCTTTGAATTC+TGG 0.223504 3_3:+88133416 Msa0481770:CDS
GCTGTCTCTTCAGTTTCTTC+TGG 0.267585 3_3:+88123180 Msa0481770:CDS
AACAAACAACCACAATTAAA+TGG 0.271533 3_3:+88123083 Msa0481770:CDS
CGTAACTCACATGTAATCTT+TGG 0.303634 3_3:-88133398 None:intergenic
TGTTGTTTGTGTAGTTGAAT+TGG 0.305690 3_3:-88133049 None:intergenic
CTGAATAAAGAGAAGGATTC+AGG 0.317437 3_3:+88133299 Msa0481770:CDS
AGACTCGGGAATGTGATATT+TGG 0.318840 3_3:+88123632 Msa0481770:CDS
TGTGCTGGTGGTGGAATGGC+GGG 0.331387 3_3:-88123119 None:intergenic
GCATCGCAGTCTTCATCTTC+TGG 0.333063 3_3:+88132973 Msa0481770:CDS
TAATTGTGGTTGTTTGTTAT+CGG 0.339443 3_3:-88123078 None:intergenic
GTTGTTTGTGTAGTTGAATT+GGG 0.359480 3_3:-88133048 None:intergenic
TTGAGGTCACATTTCACTTT+CGG 0.367481 3_3:-88123665 None:intergenic
TTGAGGCTACCAAGTGTGAT+TGG 0.384464 3_3:+88133465 Msa0481770:CDS
TCTTAAGGTGAGGTTTAAGT+TGG 0.385208 3_3:+88133349 Msa0481770:CDS
CGGTGAGGGTGAGGTTGTGC+TGG 0.391579 3_3:-88123134 None:intergenic
TCTTAGTGGTGATCAAAGTT+TGG 0.396926 3_3:+88133274 Msa0481770:CDS
AGTGTGATTGGGATCGTTGA+TGG 0.422079 3_3:+88133477 Msa0481770:CDS
AGGTTCAAGGTTCGCGGATG+TGG 0.425570 3_3:+88123430 Msa0481770:CDS
AAATTGGCGGAATGAATTCA+TGG 0.426566 3_3:-88123465 None:intergenic
CACTTCTCTTCTTAAATTGG+CGG 0.426788 3_3:-88123478 None:intergenic
GGGTGAGGTTGTGCTGGTGG+TGG 0.428714 3_3:-88123128 None:intergenic
GAGAAAGTTGTTGTTCTTAG+TGG 0.437152 3_3:+88133260 Msa0481770:CDS
TCTGGCGGTGGTTCGCCGGC+GGG 0.438220 3_3:+88133434 Msa0481770:CDS
CTTCGGTGGCGGTGAGGGTG+AGG 0.440360 3_3:-88123143 None:intergenic
GAATTCTGGCGGTGGTTCGC+CGG 0.449626 3_3:+88133430 Msa0481770:CDS
TGAGGCTACCAAGTGTGATT+GGG 0.454744 3_3:+88133466 Msa0481770:CDS
AGGTTGTGCTGGTGGTGGAA+TGG 0.466852 3_3:-88123123 None:intergenic
TTGTAGGATCTTGTTGGTGG+AGG 0.467810 3_3:-88132858 None:intergenic
CTTAAGGTGAGGTTTAAGTT+GGG 0.468942 3_3:+88133350 Msa0481770:CDS
AGGGATTGCTGGGCCGTAGT+AGG 0.471071 3_3:-88132838 None:intergenic
TAGTTGTTGTTTCTCATGCA+TGG 0.471440 3_3:-88132808 None:intergenic
TGTGTAGTTGAATTGGGTTA+AGG 0.472029 3_3:-88133042 None:intergenic
TGGAATGGCGGGGCCGTAGT+AGG 0.474577 3_3:-88123108 None:intergenic
GTGGTTCGCCGGCGGGTGGT+AGG 0.476192 3_3:+88133441 Msa0481770:CDS
TTAGAGCAAGATTGTAGTTG+AGG 0.480609 3_3:-88133079 None:intergenic
CAATTAAATGGTGCCTACTA+CGG 0.482964 3_3:+88123095 Msa0481770:CDS
CCTGAGAAAACACCACTCAT+AGG 0.484020 3_3:-88123503 None:intergenic
ACGTGGACTTTGACAGCGTT+GGG 0.489477 3_3:-88133008 None:intergenic
GAGCATTCTATGAAGGTTCA+AGG 0.492970 3_3:+88123417 Msa0481770:CDS
TAGAACTCAAAGGAACTTTG+AGG 0.493608 3_3:-88123682 None:intergenic
TTGTTGGTGGAGGGATTGCT+GGG 0.495477 3_3:-88132848 None:intergenic
CATGAGAAACAACAACTAAA+CGG 0.495875 3_3:+88132813 Msa0481770:CDS
GCCACGAGATGGACGGTTGT+AGG 0.500179 3_3:-88132874 None:intergenic
TTCTGGCGGTGGTTCGCCGG+CGG 0.501273 3_3:+88133433 Msa0481770:CDS
GGGCTTTATACCATGATGCT+AGG 0.506064 3_3:+88133162 Msa0481770:CDS
TTGTGCTGGTGGTGGAATGG+CGG 0.506260 3_3:-88123120 None:intergenic
TGTAGGATCTTGTTGGTGGA+GGG 0.507492 3_3:-88132857 None:intergenic
GGCTTTATACCATGATGCTA+GGG 0.509491 3_3:+88133163 Msa0481770:CDS
GAACAATGAGATAGAAGATA+AGG 0.510234 3_3:-88123244 None:intergenic
CGCAACCCGAACAAAAGACT+TGG 0.511397 3_3:+88133113 Msa0481770:CDS
GCCGGCGGGTGGTAGGTTTG+AGG 0.514730 3_3:+88133448 Msa0481770:CDS
GGCGGTGGTTCGCCGGCGGG+TGG 0.518402 3_3:+88133437 Msa0481770:CDS
AACCGTCCATCTCGTGGCGG+CGG 0.520361 3_3:+88132879 Msa0481770:CDS
CTATGAAGGTTCAAGGTTCG+CGG 0.520781 3_3:+88123424 Msa0481770:CDS
TGAGGGTGAGGTTGTGCTGG+TGG 0.521005 3_3:-88123131 None:intergenic
TTGAACCTTCATAGAATGCT+CGG 0.521945 3_3:-88123415 None:intergenic
ACTTTCTCACCCTTAAAGGA+AGG 0.526321 3_3:-88133245 None:intergenic
TCGAAACCGCCGCCACGAGA+TGG 0.538619 3_3:-88132885 None:intergenic
TTTGGAGCTGAATAAAGAGA+AGG 0.539334 3_3:+88133292 Msa0481770:CDS
GAGGCCCGAGCATTCTATGA+AGG 0.539846 3_3:+88123410 Msa0481770:CDS
GGACGGTTGTAGGATCTTGT+TGG 0.543682 3_3:-88132864 None:intergenic
TGATGTGAAGATGTATCTTA+AGG 0.546573 3_3:+88133334 Msa0481770:CDS
CGGTTGTAGGATCTTGTTGG+TGG 0.547420 3_3:-88132861 None:intergenic
GGCGGTTTCGACTGCTGCTG+CGG 0.550658 3_3:+88132897 Msa0481770:CDS
TCGAAATTAGATTCAGACTC+GGG 0.556645 3_3:+88123618 Msa0481770:CDS
ACTACGACTACATCGAAGCT+AGG 0.557193 3_3:+88133141 Msa0481770:CDS
CAACTAAACGGAGCCTACTA+CGG 0.560789 3_3:+88132825 Msa0481770:CDS
CTTTCTCACCCTTAAAGGAA+GGG 0.564054 3_3:-88133244 None:intergenic
TGAACCTTCATAGAATGCTC+GGG 0.564728 3_3:-88123414 None:intergenic
TAGTAGGCACCATTTAATTG+TGG 0.569855 3_3:-88123092 None:intergenic
GTTCCTTTGAATTCTGGCGG+TGG 0.570041 3_3:+88133422 Msa0481770:CDS
TAGAGTCAACCCTAGCATCA+TGG 0.574128 3_3:-88133172 None:intergenic
GACGTGGACTTTGACAGCGT+TGG 0.575314 3_3:-88133009 None:intergenic
CTGGTATTCTTAGAACTCAA+AGG 0.578974 3_3:-88123692 None:intergenic
CGTGTTCCTTTGAATTCTGG+CGG 0.590116 3_3:+88133419 Msa0481770:CDS
GAACCACCGCCAGAATTCAA+AGG 0.592368 3_3:-88133425 None:intergenic
TTCGAAATTAGATTCAGACT+CGG 0.596801 3_3:+88123617 Msa0481770:CDS
TCAACGATCCCAATCACACT+TGG 0.602797 3_3:-88133474 None:intergenic
CTCACCGTCATAATAATCAT+CGG 0.609344 3_3:+88132951 Msa0481770:CDS
CTACGACTACATCGAAGCTA+GGG 0.610192 3_3:+88133142 Msa0481770:CDS
GCCTCAAACCTACCACCCGC+CGG 0.611600 3_3:-88133449 None:intergenic
TTAAGGTTGCGTCTGTGACG+TGG 0.612953 3_3:-88133025 None:intergenic
TCCTACAACCGTCCATCTCG+TGG 0.614914 3_3:+88132873 Msa0481770:CDS
GTGCTGGTGGTGGAATGGCG+GGG 0.625212 3_3:-88123118 None:intergenic
TGAAGATGTATCTTAAGGTG+AGG 0.627237 3_3:+88133339 Msa0481770:CDS
AACCGCCGCCACGAGATGGA+CGG 0.633435 3_3:-88132881 None:intergenic
CTTCTATTACGACAAAGTTG+AGG 0.634945 3_3:+88123391 Msa0481770:CDS
CAACACACTACATTACAACA+TGG 0.639018 3_3:+88123328 Msa0481770:CDS
AAGAGAAGTGATCCTATGAG+TGG 0.676717 3_3:+88123491 Msa0481770:CDS
TACAACCGTCCATCTCGTGG+CGG 0.691515 3_3:+88132876 Msa0481770:CDS
GATGCCGATGATTATTATGA+CGG 0.710892 3_3:-88132955 None:intergenic
CGATGATTATTATGACGGTG+AGG 0.725286 3_3:-88132950 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATAAATAAAATTTAT+TGG + chr3_3:88130391-88130410 Msa0481770:intron 0.0%
!! AAATATAAATAAAATTTATT+GGG + chr3_3:88130392-88130411 Msa0481770:intron 0.0%
!!! AAATTAAAAAAAATTTTTTA+AGG - chr3_3:88131941-88131960 None:intergenic 0.0%
!!! TTAAAAAATTTTTTTTAATT+TGG + chr3_3:88131940-88131959 Msa0481770:intron 0.0%
!!! TAAAAAATTTTTTTTAATTT+GGG + chr3_3:88131941-88131960 Msa0481770:intron 0.0%
!! TTTACAAAAATTTAGTTAAA+TGG - chr3_3:88125016-88125035 None:intergenic 10.0%
!!! TTGATATAAATTTTTAAACA+AGG - chr3_3:88125399-88125418 None:intergenic 10.0%
!!! GATTAAATTTTTTTGAAAAA+TGG - chr3_3:88126456-88126475 None:intergenic 10.0%
!! TTATTAAGGAATAATATATA+TGG - chr3_3:88126609-88126628 None:intergenic 10.0%
!! CTAAATAAATTTGTAAAAAA+AGG + chr3_3:88128443-88128462 Msa0481770:intron 10.0%
!!! TATATTTTATTTGATTAATG+TGG - chr3_3:88128624-88128643 None:intergenic 10.0%
!!! ATTAATATTTTGATAATATC+TGG + chr3_3:88129684-88129703 Msa0481770:intron 10.0%
!!! ATTTAATTTGTTTACATTTT+AGG + chr3_3:88130353-88130372 Msa0481770:intron 10.0%
!!! GTAAATATTTTTAAAAACTA+AGG - chr3_3:88131255-88131274 None:intergenic 10.0%
!! TAATAGTAATATTAATAGAA+GGG - chr3_3:88132636-88132655 None:intergenic 10.0%
!! TTAATAGTAATATTAATAGA+AGG - chr3_3:88132637-88132656 None:intergenic 10.0%
!! TGAAATTAAACAATTATAAC+AGG - chr3_3:88123864-88123883 None:intergenic 15.0%
!!! TATTTAATTTCCAATGAAAA+AGG + chr3_3:88124010-88124029 Msa0481770:intron 15.0%
!! TATACATTAGTTAAAAAGTA+TGG + chr3_3:88124469-88124488 Msa0481770:intron 15.0%
!!! ATTCGTTATTTTTAAAAACA+CGG - chr3_3:88124798-88124817 None:intergenic 15.0%
!! ATTTAATTAGAAGAATTCTT+AGG + chr3_3:88124816-88124835 Msa0481770:intron 15.0%
!! AACTTAAAAAATGACATAAT+AGG + chr3_3:88125051-88125070 Msa0481770:intron 15.0%
!! AAGTTGGAAAAAAATAATAA+AGG + chr3_3:88125456-88125475 Msa0481770:intron 15.0%
!!! TCTCCATTTATTTTTATAAA+TGG + chr3_3:88125648-88125667 Msa0481770:intron 15.0%
!! TCTCCATTTATAAAAATAAA+TGG - chr3_3:88125654-88125673 None:intergenic 15.0%
!!! ATTTATTTTTATAAATGGAG+AGG + chr3_3:88125653-88125672 Msa0481770:intron 15.0%
!!! TGAATCTAATTTTTTTAAGA+AGG + chr3_3:88125845-88125864 Msa0481770:intron 15.0%
!!! GTTTCCTTTTATTTTTTAAA+GGG - chr3_3:88126191-88126210 None:intergenic 15.0%
!!! AGTTTCCTTTTATTTTTTAA+AGG - chr3_3:88126192-88126211 None:intergenic 15.0%
!!! GTTTCCTTTTATTTTTTAAA+GGG - chr3_3:88126191-88126210 None:intergenic 15.0%
!!! TGTTTCCTTTTATTTTTTAA+AGG - chr3_3:88126292-88126311 None:intergenic 15.0%
!!! AGAATCATTATTTTAAACTT+AGG - chr3_3:88126487-88126506 None:intergenic 15.0%
!! AAAAAACATATTAATAAGAG+TGG + chr3_3:88126629-88126648 Msa0481770:intron 15.0%
!! AAAAACATATTAATAAGAGT+GGG + chr3_3:88126630-88126649 Msa0481770:intron 15.0%
!! TCTTACTTAATTACTAAATT+AGG + chr3_3:88126906-88126925 Msa0481770:intron 15.0%
!! ACAATATCTTATATCAAAAT+TGG - chr3_3:88127278-88127297 None:intergenic 15.0%
!! TAAAATAATTAGTAAGTTCA+GGG - chr3_3:88127422-88127441 None:intergenic 15.0%
!! TTAAAATAATTAGTAAGTTC+AGG - chr3_3:88127423-88127442 None:intergenic 15.0%
!!! TTGATTATTGCATTTTAAAA+AGG + chr3_3:88128040-88128059 Msa0481770:intron 15.0%
!! TTAATTAGTAAAACTCTTTA+AGG + chr3_3:88129218-88129237 Msa0481770:intron 15.0%
!!! AAACTATATAATTTCTTTTG+AGG - chr3_3:88129756-88129775 None:intergenic 15.0%
!! TTATTAGAAAATAAAAACGT+TGG + chr3_3:88129809-88129828 Msa0481770:intron 15.0%
!! AAACTAAAATAATTAATGCT+TGG + chr3_3:88129880-88129899 Msa0481770:intron 15.0%
!! AAAAAAGTAACTTATTTGTA+AGG - chr3_3:88130081-88130100 None:intergenic 15.0%
!!! TCCACAATAAATTTAAAATT+TGG + chr3_3:88130559-88130578 Msa0481770:intron 15.0%
!!! TTTAAATTTACAATTTTGAC+CGG + chr3_3:88131227-88131246 Msa0481770:intron 15.0%
!! TTTAAAAATATTTACTCGTT+TGG + chr3_3:88131260-88131279 Msa0481770:intron 15.0%
!! GATATAATATTTCAATACAA+GGG - chr3_3:88131587-88131606 None:intergenic 15.0%
!!! TTATTTTTAGTTTTTTGACA+AGG - chr3_3:88131793-88131812 None:intergenic 15.0%
!!! ATTTTGTTATGGAAAATATT+TGG - chr3_3:88132339-88132358 None:intergenic 15.0%
!! AATAGTAATATTAATAGAAG+GGG - chr3_3:88132635-88132654 None:intergenic 15.0%
!!! GTTTAATTTCATTGTTTCTT+TGG + chr3_3:88123873-88123892 Msa0481770:intron 20.0%
!! GAATGTACTGAAAAAAAAAA+TGG - chr3_3:88123939-88123958 None:intergenic 20.0%
!!! ATTTTACTTATAATAGTGAC+CGG + chr3_3:88124189-88124208 Msa0481770:intron 20.0%
!! AAATACAAGTATTTCTTTAC+CGG - chr3_3:88124250-88124269 None:intergenic 20.0%
!! ACTTTAAATCCATAAATTGA+CGG + chr3_3:88124728-88124747 Msa0481770:intron 20.0%
!! TAATTAAAGACCAACTAATA+CGG - chr3_3:88124766-88124785 None:intergenic 20.0%
!! CGTGAAATGAAATTAATTAA+AGG - chr3_3:88124972-88124991 None:intergenic 20.0%
!! AATTTCTATCTTCTAATAGT+TGG - chr3_3:88125702-88125721 None:intergenic 20.0%
!!! TTAGAAGATAGAAATTTTGA+AGG + chr3_3:88125706-88125725 Msa0481770:intron 20.0%
!! ATGATGAAATGAAGAAAAAA+AGG + chr3_3:88125734-88125753 Msa0481770:intron 20.0%
!!! ATACAAGTTTTTTTTTTGTC+AGG - chr3_3:88126149-88126168 None:intergenic 20.0%
!!! TACAAGTTTTTTTTTTTGTC+AGG - chr3_3:88126248-88126267 None:intergenic 20.0%
!! ACATCATTATATTACTTGTA+TGG + chr3_3:88126552-88126571 Msa0481770:intron 20.0%
!!! CTTTTTTCTGATATTGTATA+TGG - chr3_3:88126811-88126830 None:intergenic 20.0%
!! AAAAACACTGATATTGTATA+TGG - chr3_3:88126841-88126860 None:intergenic 20.0%
!!! TTTTAATTGATGTTAACATC+AGG + chr3_3:88126867-88126886 Msa0481770:intron 20.0%
!!! AATAGAGGTTATTTGAAATT+TGG + chr3_3:88127395-88127414 Msa0481770:intron 20.0%
!!! AATGATTAAAAATTTTGCAG+TGG - chr3_3:88127450-88127469 None:intergenic 20.0%
!! TAAATCACAAGTAATTAGAT+GGG - chr3_3:88127491-88127510 None:intergenic 20.0%
!! TGTATTTAATACACGAAAAA+TGG + chr3_3:88128798-88128817 Msa0481770:intron 20.0%
!! GTATTTAATACACGAAAAAT+GGG + chr3_3:88128799-88128818 Msa0481770:intron 20.0%
!! TGTATTATTTGCAGTAATAT+TGG + chr3_3:88128942-88128961 Msa0481770:intron 20.0%
!! CATGTTTAATTCATGATAAT+TGG + chr3_3:88129023-88129042 Msa0481770:intron 20.0%
!!! AAGAGTTTTACTAATTAAGT+TGG - chr3_3:88129216-88129235 None:intergenic 20.0%
!! TATAGTACTATATACATGTT+AGG - chr3_3:88129726-88129745 None:intergenic 20.0%
!!! TAGAAGTAACTTTGAAAATA+AGG - chr3_3:88130046-88130065 None:intergenic 20.0%
!!! AGTTTTATTGAAATTGTGTT+TGG + chr3_3:88130108-88130127 Msa0481770:intron 20.0%
!! AATAAAATATGCATTCACTA+TGG + chr3_3:88130229-88130248 Msa0481770:intron 20.0%
!!! ATTAAATTTTGCTAAGAAAC+TGG - chr3_3:88130340-88130359 None:intergenic 20.0%
!!! GCCAAATTTTAAATTTATTG+TGG - chr3_3:88130563-88130582 None:intergenic 20.0%
!! TCAAATAGAATCTATCTATT+GGG - chr3_3:88130759-88130778 None:intergenic 20.0%
!! TTCAAATAGAATCTATCTAT+TGG - chr3_3:88130760-88130779 None:intergenic 20.0%
!! TAAAATTATACGAGACTTAT+AGG + chr3_3:88131032-88131051 Msa0481770:intron 20.0%
!! AAACGTACTAATATTGTATT+TGG - chr3_3:88131172-88131191 None:intergenic 20.0%
!! GGATATAATATTTCAATACA+AGG - chr3_3:88131588-88131607 None:intergenic 20.0%
!!! AGGTTTAAATAATTTAGTTC+TGG - chr3_3:88131773-88131792 None:intergenic 20.0%
!!! AATTAGTATATGTTGATTGA+AGG + chr3_3:88131882-88131901 Msa0481770:intron 20.0%
!!! TTGATTGAAGGATTTTAATT+TGG + chr3_3:88131894-88131913 Msa0481770:intron 20.0%
!!! TCCATAACAAAATTCTAAAA+TGG + chr3_3:88132346-88132365 Msa0481770:intron 20.0%
!!! TCCATTTTAGAATTTTGTTA+TGG - chr3_3:88132350-88132369 None:intergenic 20.0%
!! ACTAGTTGAGAAAATAATTA+CGG - chr3_3:88132502-88132521 None:intergenic 20.0%
!!! TAATTGTGGTTGTTTGTTAT+CGG - chr3_3:88123081-88123100 None:intergenic 25.0%
! AACAAACAACCACAATTAAA+TGG + chr3_3:88123083-88123102 Msa0481770:CDS 25.0%
!!! AGAAGTTGAGTTTTTTGTTT+GGG - chr3_3:88123376-88123395 None:intergenic 25.0%
!!! TAGAAGTTGAGTTTTTTGTT+TGG - chr3_3:88123377-88123396 None:intergenic 25.0%
! AATAACAGCAAACAAATCTA+GGG - chr3_3:88123961-88123980 None:intergenic 25.0%
! TAATAACAGCAAACAAATCT+AGG - chr3_3:88123962-88123981 None:intergenic 25.0%
!!! AATCAAGTATCCTTTTTCAT+TGG - chr3_3:88124023-88124042 None:intergenic 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG - chr3_3:88124080-88124099 None:intergenic 25.0%
!!! ATTGGACATGTATTTTGAAA+CGG + chr3_3:88124528-88124547 Msa0481770:intron 25.0%
!!! AAGGAAAACACGTTTTAATA+AGG - chr3_3:88124641-88124660 None:intergenic 25.0%
! AAGTCAAACTTAAGACTTTA+AGG - chr3_3:88124660-88124679 None:intergenic 25.0%
! AATTAAAGACCAACTAATAC+GGG - chr3_3:88124765-88124784 None:intergenic 25.0%
!!! GTATTAGTTGGTCTTTAATT+AGG + chr3_3:88124765-88124784 Msa0481770:intron 25.0%
!!! ATCTAATGAGTTTTGTCAAT+GGG - chr3_3:88124864-88124883 None:intergenic 25.0%
!!! TATCTAATGAGTTTTGTCAA+TGG - chr3_3:88124865-88124884 None:intergenic 25.0%
! ATAATTGTCCTCAAAACATT+TGG - chr3_3:88124944-88124963 None:intergenic 25.0%
!!! CTATAACCTTTGAAACTTAA+AGG - chr3_3:88125161-88125180 None:intergenic 25.0%
! AAGTTTCAAAGGTTATAGAT+AGG + chr3_3:88125163-88125182 Msa0481770:intron 25.0%
! CAAGGATAATGTAAAACTTT+AGG - chr3_3:88125381-88125400 None:intergenic 25.0%
! ACAACTTAATATGATGTTGA+TGG - chr3_3:88125425-88125444 None:intergenic 25.0%
! GTTGTCAAAGTATATTAAGT+TGG + chr3_3:88125440-88125459 Msa0481770:intron 25.0%
! AAGTCAATGACTTAAAATGT+AGG + chr3_3:88125492-88125511 Msa0481770:intron 25.0%
! ATACAAATAGTCAATGTCTT+AGG + chr3_3:88125534-88125553 Msa0481770:intron 25.0%
!! ATTTTACTCCTAATTCACTA+TGG + chr3_3:88125676-88125695 Msa0481770:intron 25.0%
! TTTATCATTTCTCTTCGTTA+AGG - chr3_3:88125812-88125831 None:intergenic 25.0%
! ACAATGCATTATTATATGCA+GGG + chr3_3:88126057-88126076 Msa0481770:intron 25.0%
!! ACAGCCCTTTAAAAAATAAA+AGG + chr3_3:88126184-88126203 Msa0481770:intron 25.0%
!! ACAGCCCTTTAAAAAATAAA+AGG + chr3_3:88126184-88126203 Msa0481770:intron 25.0%
! AAGACAACAAGTTAAGAAAA+AGG + chr3_3:88126324-88126343 Msa0481770:intron 25.0%
! AATTTCTATCCTAAAGTAGA+AGG - chr3_3:88126362-88126381 None:intergenic 25.0%
!!! TTTTTTTGAAAAATGGTGAG+AGG - chr3_3:88126449-88126468 None:intergenic 25.0%
! ATCTTAAAGATGAATAAGTG+GGG - chr3_3:88126740-88126759 None:intergenic 25.0%
! CATCTTAAAGATGAATAAGT+GGG - chr3_3:88126741-88126760 None:intergenic 25.0%
! TCATCTTAAAGATGAATAAG+TGG - chr3_3:88126742-88126761 None:intergenic 25.0%
! TTGACCAAAAAAAAAAGAGT+GGG + chr3_3:88126784-88126803 Msa0481770:intron 25.0%
! TACAATATCAGAAAAAAGAG+TGG + chr3_3:88126813-88126832 Msa0481770:intron 25.0%
! ACAATATCAGAAAAAAGAGT+GGG + chr3_3:88126814-88126833 Msa0481770:intron 25.0%
! CTAAATTAGGCATACAATAT+CGG + chr3_3:88126919-88126938 Msa0481770:intron 25.0%
!! CTCACTTAAAAACTCATTTT+TGG + chr3_3:88127313-88127332 Msa0481770:intron 25.0%
! GTAAATCACAAGTAATTAGA+TGG - chr3_3:88127492-88127511 None:intergenic 25.0%
! TGTGATTTACTTGAAGAAAT+TGG + chr3_3:88127502-88127521 Msa0481770:intron 25.0%
! GTGATTTACTTGAAGAAATT+GGG + chr3_3:88127503-88127522 Msa0481770:intron 25.0%
! AAATTTGTGCAATTGAAGTT+TGG + chr3_3:88127529-88127548 Msa0481770:intron 25.0%
! AATTGAAGTTTGGAGAAATT+TGG + chr3_3:88127539-88127558 Msa0481770:intron 25.0%
! GTTTACTGATGTTTATGTTA+TGG + chr3_3:88127600-88127619 Msa0481770:intron 25.0%
! AATAACTTCCTAAAAACACA+TGG - chr3_3:88127696-88127715 None:intergenic 25.0%
! AGCAGAGTTAAAAATTTCAA+AGG - chr3_3:88128236-88128255 None:intergenic 25.0%
! TTAAAGCAACATGTTAACAA+GGG + chr3_3:88128262-88128281 Msa0481770:intron 25.0%
! AGTTGTTAACATCTTATATC+TGG - chr3_3:88128316-88128335 None:intergenic 25.0%
!!! TTAGTCTTTTAGGTTACTTT+TGG - chr3_3:88128507-88128526 None:intergenic 25.0%
!!! ATCATTAAGCTTAGTCTTTT+AGG - chr3_3:88128517-88128536 None:intergenic 25.0%
!!! CTAATATTTTAGCTGAATGT+TGG - chr3_3:88128570-88128589 None:intergenic 25.0%
! ATATAAGTACTCGTAAACAA+AGG + chr3_3:88128639-88128658 Msa0481770:intron 25.0%
! CATTCTTATTGATATTCTTC+TGG - chr3_3:88128703-88128722 None:intergenic 25.0%
! ATGTGATTTATACATGTAGT+TGG + chr3_3:88128850-88128869 Msa0481770:intron 25.0%
! AATGTATTAAATATGACTCC+TGG - chr3_3:88128906-88128925 None:intergenic 25.0%
! ATTATTTGCAGTAATATTGG+TGG + chr3_3:88128945-88128964 Msa0481770:intron 25.0%
! CATGAATTAAACATGATTGT+TGG - chr3_3:88129018-88129037 None:intergenic 25.0%
!! TTTTAGACCTCAAAAAAGTA+GGG - chr3_3:88129119-88129138 None:intergenic 25.0%
! CAATTGTAAATGTCTATCTT+GGG - chr3_3:88129273-88129292 None:intergenic 25.0%
! TCAATTGTAAATGTCTATCT+TGG - chr3_3:88129274-88129293 None:intergenic 25.0%
!!! AAAGTTTGCTAAAAAGATGA+TGG + chr3_3:88129386-88129405 Msa0481770:intron 25.0%
! GTCTTGATCTTAATTGATAA+AGG + chr3_3:88129473-88129492 Msa0481770:intron 25.0%
! AAATCGTTAAATATGTTGCA+GGG - chr3_3:88129659-88129678 None:intergenic 25.0%
! AAAATCGTTAAATATGTTGC+AGG - chr3_3:88129660-88129679 None:intergenic 25.0%
! AAAGTAAAAATGTTCCATGT+AGG + chr3_3:88129958-88129977 Msa0481770:intron 25.0%
!! TTTTCAAAGTTACTTCTATG+TGG + chr3_3:88130048-88130067 Msa0481770:intron 25.0%
! TGGAAGATAAGTAGAAAATA+AGG + chr3_3:88130150-88130169 Msa0481770:intron 25.0%
! AAGATAAGTAGAAAATAAGG+AGG + chr3_3:88130153-88130172 Msa0481770:intron 25.0%
! AGATAAGTAGAAAATAAGGA+GGG + chr3_3:88130154-88130173 Msa0481770:intron 25.0%
!! TATATCATTAAGAGCATGTT+TGG - chr3_3:88130180-88130199 None:intergenic 25.0%
! AATTTATTGGGACTTATACT+TGG + chr3_3:88130404-88130423 Msa0481770:intron 25.0%
! TTTAAATTTATTGTGGAGCT+AGG - chr3_3:88130556-88130575 None:intergenic 25.0%
! ATTTGAACAAGATCAAATGT+TGG - chr3_3:88130696-88130715 None:intergenic 25.0%
!! AAGTTACATGTCTTTTCATA+TGG - chr3_3:88130899-88130918 None:intergenic 25.0%
! AAAGCCAATATATTGACATT+GGG - chr3_3:88131091-88131110 None:intergenic 25.0%
! AAAAGCCAATATATTGACAT+TGG - chr3_3:88131092-88131111 None:intergenic 25.0%
!!! ATTTTTAAAAACTAAGGGAC+CGG - chr3_3:88131249-88131268 None:intergenic 25.0%
!! AAGAGAGATTAAAAAAGTGT+GGG + chr3_3:88131481-88131500 Msa0481770:intron 25.0%
! TTTCAATACAAGGGTAAAAA+AGG - chr3_3:88131578-88131597 None:intergenic 25.0%
! ACAAGATTAAATAGGAACAA+GGG - chr3_3:88131620-88131639 None:intergenic 25.0%
! AACAAGATTAAATAGGAACA+AGG - chr3_3:88131621-88131640 None:intergenic 25.0%
! AAGGAACAACAAGATTAAAT+AGG - chr3_3:88131628-88131647 None:intergenic 25.0%
!! ATGAAGTGTTTCTATATTAC+TGG + chr3_3:88131670-88131689 Msa0481770:intron 25.0%
!!! GTGACTTATTTTACATAAAG+TGG + chr3_3:88132141-88132160 Msa0481770:intron 25.0%
!! TCGTATCTCTTTTTCTTATA+TGG + chr3_3:88132306-88132325 Msa0481770:intron 25.0%
!! CGTATCTCTTTTTCTTATAT+GGG + chr3_3:88132307-88132326 Msa0481770:intron 25.0%
!!! ACTTTTTCATATCACAAACT+AGG + chr3_3:88132700-88132719 Msa0481770:intron 25.0%
!! TTTCTTGATCCTTTTTATCA+AGG + chr3_3:88133197-88133216 Msa0481770:CDS 25.0%
!! GTTTTATGTCCTTGATAAAA+AGG - chr3_3:88133209-88133228 None:intergenic 25.0%
GAACAATGAGATAGAAGATA+AGG - chr3_3:88123247-88123266 None:intergenic 30.0%
! GTAGTCGAATTTTGTTAGAT+TGG - chr3_3:88123303-88123322 None:intergenic 30.0%
GATCACTTCTCTTCTTAAAT+TGG - chr3_3:88123484-88123503 None:intergenic 30.0%
TTCGAAATTAGATTCAGACT+CGG + chr3_3:88123617-88123636 Msa0481770:CDS 30.0%
GTTTATTGCACAGAAAAGAA+AGG - chr3_3:88123917-88123936 None:intergenic 30.0%
AAATATTAACATACTCCCTC+CGG + chr3_3:88124058-88124077 Msa0481770:intron 30.0%
TAACATTCCTTAACATTTGC+CGG + chr3_3:88124228-88124247 Msa0481770:intron 30.0%
!! CTTGGACATGTATTTTGAAA+CGG - chr3_3:88124307-88124326 None:intergenic 30.0%
TAACAGTCAAAATTGTGCAT+TGG - chr3_3:88124348-88124367 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG + chr3_3:88124510-88124529 Msa0481770:intron 30.0%
!! ATATACTTGAGTTGATGAGA+TGG + chr3_3:88124602-88124621 Msa0481770:intron 30.0%
CTAATTCTACCGTCAATTTA+TGG - chr3_3:88124740-88124759 None:intergenic 30.0%
ATTAAAGACCAACTAATACG+GGG - chr3_3:88124764-88124783 None:intergenic 30.0%
! GATGAGTTGTAGTAAAGTTT+TGG + chr3_3:88125086-88125105 Msa0481770:intron 30.0%
GTTACAAACGTGAAACTTAA+AGG - chr3_3:88125337-88125356 None:intergenic 30.0%
! ATAGGTCCTTTAAGTTTCAA+AGG + chr3_3:88125152-88125171 Msa0481770:intron 30.0%
! ATAGGTCCTTTAAGTTTCTA+AGG + chr3_3:88125181-88125200 Msa0481770:intron 30.0%
CTGAAACCTTAGAAACTTAA+AGG - chr3_3:88125277-88125296 None:intergenic 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG + chr3_3:88125192-88125211 Msa0481770:intron 30.0%
GAAACAAACTCGAAACTTAA+AGG + chr3_3:88125248-88125267 Msa0481770:intron 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG - chr3_3:88125192-88125211 None:intergenic 30.0%
CTGAAACCTTAGAAACTTAA+AGG + chr3_3:88125277-88125296 Msa0481770:intron 30.0%
! ATAGGTCCTTTAAGTTTCTA+AGG - chr3_3:88125181-88125200 None:intergenic 30.0%
AAGTTTCAAAGGTTACAGAT+AGG - chr3_3:88125304-88125323 None:intergenic 30.0%
!! CTGTAACCTTTGAAACTTAA+AGG + chr3_3:88125306-88125325 Msa0481770:intron 30.0%
! ATAGGTCCTTTAAGTTTCAA+AGG - chr3_3:88125152-88125171 None:intergenic 30.0%
GTTACAAACGTGAAACTTAA+AGG + chr3_3:88125337-88125356 Msa0481770:intron 30.0%
!! AGATAGAAATTTTGAAGGAG+TGG + chr3_3:88125711-88125730 Msa0481770:intron 30.0%
GACAATGCATTATTATATGC+AGG + chr3_3:88126056-88126075 Msa0481770:intron 30.0%
CAATGCATTATTATATGCAG+GGG + chr3_3:88126058-88126077 Msa0481770:intron 30.0%
ACCTTATAAGGTGAATAAGT+GGG - chr3_3:88126106-88126125 None:intergenic 30.0%
TGGCTAAAATTCACCTTATA+AGG - chr3_3:88126118-88126137 None:intergenic 30.0%
AAAAGGAAACTCACCTTATA+AGG + chr3_3:88126201-88126220 Msa0481770:intron 30.0%
TATCCTAAAGTAGAAGGATT+TGG - chr3_3:88126356-88126375 None:intergenic 30.0%
! ATTGGGTCAAGAAGAAATTT+TGG + chr3_3:88126410-88126429 Msa0481770:intron 30.0%
AGAATAGAAGAGATAAGGAA+AGG - chr3_3:88126510-88126529 None:intergenic 30.0%
TGAGAAGAATAGAAGAGATA+AGG - chr3_3:88126515-88126534 None:intergenic 30.0%
ATCAAATGAGCTAAGTTCAT+TGG - chr3_3:88126668-88126687 None:intergenic 30.0%
TGAACTTAGCTCATTTGATA+AGG + chr3_3:88126669-88126688 Msa0481770:intron 30.0%
GAACTTAGCTCATTTGATAA+GGG + chr3_3:88126670-88126689 Msa0481770:intron 30.0%
CTTGACCAAAAAAAAAAGAG+TGG + chr3_3:88126783-88126802 Msa0481770:intron 30.0%
! GTTAACATCAGGTGTTTTAT+CGG + chr3_3:88126878-88126897 Msa0481770:intron 30.0%
! TTAACATCAGGTGTTTTATC+GGG + chr3_3:88126879-88126898 Msa0481770:intron 30.0%
TATAAACTCACACACATAAG+TGG + chr3_3:88126982-88127001 Msa0481770:intron 30.0%
AAATGTCGAAATTGTTAGGT+CGG - chr3_3:88127040-88127059 None:intergenic 30.0%
CGTAAAATGTCGAAATTGTT+AGG - chr3_3:88127044-88127063 None:intergenic 30.0%
! AACTTAGCAATTCGTTTTCA+TGG + chr3_3:88127225-88127244 Msa0481770:intron 30.0%
TCAAATAACCTCTATTTGCA+GGG - chr3_3:88127391-88127410 None:intergenic 30.0%
TTCAAATAACCTCTATTTGC+AGG - chr3_3:88127392-88127411 None:intergenic 30.0%
AGAACAAAAATGAGTTAGTG+TGG + chr3_3:88127738-88127757 Msa0481770:intron 30.0%
GAACAAAAATGAGTTAGTGT+GGG + chr3_3:88127739-88127758 Msa0481770:intron 30.0%
TTTGTAGACATTCTGACAAA+TGG + chr3_3:88127812-88127831 Msa0481770:intron 30.0%
!! TAAAGTGTGGGATTTTTCAA+CGG - chr3_3:88127905-88127924 None:intergenic 30.0%
CTGTTTAATGCTAACCATTA+TGG - chr3_3:88127982-88128001 None:intergenic 30.0%
! GTTAGCATTAAACAGTTTTG+TGG + chr3_3:88127987-88128006 Msa0481770:intron 30.0%
!! AGTTTTGTGGATTTTAGCAT+TGG + chr3_3:88128000-88128019 Msa0481770:intron 30.0%
!! GCATTTTAAAAAGGTTTCTG+TGG + chr3_3:88128049-88128068 Msa0481770:intron 30.0%
CTTAAAGCAACATGTTAACA+AGG + chr3_3:88128261-88128280 Msa0481770:intron 30.0%
CATAGCTAACATCGTAATTA+AGG + chr3_3:88128395-88128414 Msa0481770:intron 30.0%
CAAATTTATTTAGCCTCATC+TGG - chr3_3:88128436-88128455 None:intergenic 30.0%
CTAAGCTTAATGATTTAAGC+AGG + chr3_3:88128523-88128542 Msa0481770:intron 30.0%
!!! ATATTTTAGCTGAATGTTGG+TGG - chr3_3:88128567-88128586 None:intergenic 30.0%
AGCTAAAATATTAGCTGCTT+TGG + chr3_3:88128576-88128595 Msa0481770:intron 30.0%
TGATTTATACATGTAGTTGG+TGG + chr3_3:88128853-88128872 Msa0481770:intron 30.0%
TGATTGAAATATATGACACC+AGG + chr3_3:88128885-88128904 Msa0481770:intron 30.0%
AAACAACTCTACCAATTACA+TGG - chr3_3:88128976-88128995 None:intergenic 30.0%
! CTTTTAGACCTCAAAAAAGT+AGG - chr3_3:88129120-88129139 None:intergenic 30.0%
AAGTTAAAGCTAAAGTCGTT+TGG + chr3_3:88129175-88129194 Msa0481770:intron 30.0%
! AGATGATGGTCTATTATTGT+TGG + chr3_3:88129400-88129419 Msa0481770:intron 30.0%
AAAATAAAAACGTTGGCGTT+TGG + chr3_3:88129816-88129835 Msa0481770:intron 30.0%
AAATAATTAATGCTTGGAGC+TGG + chr3_3:88129886-88129905 Msa0481770:intron 30.0%
AATAATTAATGCTTGGAGCT+GGG + chr3_3:88129887-88129906 Msa0481770:intron 30.0%
! TACACGGCATTTTACATATT+TGG - chr3_3:88129998-88130017 None:intergenic 30.0%
CAACTTCAAAACTACTTACA+CGG - chr3_3:88130014-88130033 None:intergenic 30.0%
CTACTTATCTTCCACTTATA+AGG - chr3_3:88130144-88130163 None:intergenic 30.0%
TATGCATTCACTATGGTTAT+TGG + chr3_3:88130236-88130255 Msa0481770:intron 30.0%
GGTCATTACAACATTTAAAG+TGG - chr3_3:88130319-88130338 None:intergenic 30.0%
! AACTGAATTTTTCATGCTCT+AGG + chr3_3:88130503-88130522 Msa0481770:intron 30.0%
AATTTGGCATAAAATCCTTC+AGG + chr3_3:88130575-88130594 Msa0481770:intron 30.0%
ATTTGGCATAAAATCCTTCA+GGG + chr3_3:88130576-88130595 Msa0481770:intron 30.0%
TGATCTTGTTCAAATATCTG+AGG + chr3_3:88130701-88130720 Msa0481770:intron 30.0%
ATTCCCCAATGTCAATATAT+TGG + chr3_3:88131084-88131103 Msa0481770:intron 30.0%
AAGCCAATATATTGACATTG+GGG - chr3_3:88131090-88131109 None:intergenic 30.0%
!!! TGTCAATATATTGGCTTTTC+TGG + chr3_3:88131093-88131112 Msa0481770:intron 30.0%
AGAAATAAAAATGTGACGTG+AGG - chr3_3:88131201-88131220 None:intergenic 30.0%
TGTTTGGTTGAAGAGAAATA+AGG + chr3_3:88131384-88131403 Msa0481770:intron 30.0%
! TGTTTGAAATGAAGAGAAAC+AGG + chr3_3:88131457-88131476 Msa0481770:intron 30.0%
! GTTTGAAATGAAGAGAAACA+GGG + chr3_3:88131458-88131477 Msa0481770:intron 30.0%
GAAGAGAGATTAAAAAAGTG+TGG + chr3_3:88131480-88131499 Msa0481770:intron 30.0%
TATTGTGAGGAGACATAAAA+AGG - chr3_3:88131515-88131534 None:intergenic 30.0%
TAGGAACAAGGGTAAAAAAT+TGG - chr3_3:88131609-88131628 None:intergenic 30.0%
TTGTTCCTTCTATAATCTCT+CGG + chr3_3:88131639-88131658 Msa0481770:intron 30.0%
TTTAGTAGATAGACCAACAT+TGG + chr3_3:88131708-88131727 Msa0481770:intron 30.0%
CATAAATCCATTTCCAATGT+TGG - chr3_3:88131724-88131743 None:intergenic 30.0%
GAGAAATAGAGTAGATTTGA+TGG - chr3_3:88132043-88132062 None:intergenic 30.0%
TAAGTCACTTACACTTTGTT+TGG - chr3_3:88132129-88132148 None:intergenic 30.0%
GCACATTGGAATTTGATTAT+TGG - chr3_3:88132171-88132190 None:intergenic 30.0%
TTGAGAAAATAATTACGGCA+AGG - chr3_3:88132497-88132516 None:intergenic 30.0%
AGTAATATTAATAGAAGGGG+AGG - chr3_3:88132632-88132651 None:intergenic 30.0%
GATGTACGAGAGAAAAATAA+CGG - chr3_3:88132746-88132765 None:intergenic 30.0%
TTAGAGAAGAAAAGAAAGTG+CGG - chr3_3:88132778-88132797 None:intergenic 30.0%
CATGAGAAACAACAACTAAA+CGG + chr3_3:88132813-88132832 Msa0481770:CDS 30.0%
TGAGGATGAGTTTGAATATT+AGG - chr3_3:88132935-88132954 None:intergenic 30.0%
GTTGTTTGTGTAGTTGAATT+GGG - chr3_3:88133051-88133070 None:intergenic 30.0%
! TGTTGTTTGTGTAGTTGAAT+TGG - chr3_3:88133052-88133071 None:intergenic 30.0%
!!! TTTTTTGAACCCTTCCTTTA+AGG + chr3_3:88133235-88133254 Msa0481770:CDS 30.0%
! TTTTTGAACCCTTCCTTTAA+GGG + chr3_3:88133236-88133255 Msa0481770:CDS 30.0%
TGATGTGAAGATGTATCTTA+AGG + chr3_3:88133334-88133353 Msa0481770:CDS 30.0%
TAGTAGGCACCATTTAATTG+TGG - chr3_3:88123095-88123114 None:intergenic 35.0%
CAATTAAATGGTGCCTACTA+CGG + chr3_3:88123095-88123114 Msa0481770:CDS 35.0%
TTCGTTGACATAGAACTTGA+AGG - chr3_3:88123279-88123298 None:intergenic 35.0%
CAACACACTACATTACAACA+TGG + chr3_3:88123328-88123347 Msa0481770:CDS 35.0%
CTTCTATTACGACAAAGTTG+AGG + chr3_3:88123391-88123410 Msa0481770:CDS 35.0%
TTGAACCTTCATAGAATGCT+CGG - chr3_3:88123418-88123437 None:intergenic 35.0%
AAATTGGCGGAATGAATTCA+TGG - chr3_3:88123468-88123487 None:intergenic 35.0%
CACTTCTCTTCTTAAATTGG+CGG - chr3_3:88123481-88123500 None:intergenic 35.0%
TCGAAATTAGATTCAGACTC+GGG + chr3_3:88123618-88123637 Msa0481770:CDS 35.0%
TTGAGGTCACATTTCACTTT+CGG - chr3_3:88123668-88123687 None:intergenic 35.0%
TAGAACTCAAAGGAACTTTG+AGG - chr3_3:88123685-88123704 None:intergenic 35.0%
CTGGTATTCTTAGAACTCAA+AGG - chr3_3:88123695-88123714 None:intergenic 35.0%
AAATCAACATCACACTTGGT+GGG - chr3_3:88123740-88123759 None:intergenic 35.0%
GTAGAAATCAACATCACACT+TGG - chr3_3:88123744-88123763 None:intergenic 35.0%
! TTTCTACTAACTTGTGCCTA+TGG + chr3_3:88123757-88123776 Msa0481770:intron 35.0%
TTACTTATAATAGTGACCGG+AGG + chr3_3:88124192-88124211 Msa0481770:intron 35.0%
TACTTATAATAGTGACCGGA+GGG + chr3_3:88124193-88124212 Msa0481770:intron 35.0%
TTCTTTACCGGCAAATGTTA+AGG - chr3_3:88124238-88124257 None:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+TGG + chr3_3:88124532-88124551 Msa0481770:intron 35.0%
! TCTACCAACCAAATGTTTTG+AGG + chr3_3:88124933-88124952 Msa0481770:intron 35.0%
TTGTCCTCAAAACATTTGGT+TGG - chr3_3:88124940-88124959 None:intergenic 35.0%
! TTTTGGTCAAATACCTTCCT+GGG + chr3_3:88125103-88125122 Msa0481770:intron 35.0%
GTTTCACGTTTGTAACAGAT+AGG + chr3_3:88125134-88125153 Msa0481770:intron 35.0%
!! GTTTCGAGTTTGTTTCAGAT+AGG - chr3_3:88125244-88125263 None:intergenic 35.0%
GTTTCACGTTTGTAACAGAT+AGG - chr3_3:88125134-88125153 None:intergenic 35.0%
TAGTCAATGTCTTAGGAACT+TGG + chr3_3:88125541-88125560 Msa0481770:intron 35.0%
ATAGTTGGCCATAGTGAATT+AGG - chr3_3:88125687-88125706 None:intergenic 35.0%
CGTTAAGGTTTGATTGAAGA+AGG - chr3_3:88125797-88125816 None:intergenic 35.0%
CATTATTATATGCAGGGGTT+GGG + chr3_3:88126063-88126082 Msa0481770:intron 35.0%
ATTATTATATGCAGGGGTTG+GGG + chr3_3:88126064-88126083 Msa0481770:intron 35.0%
CCTTATAAGGTGAATAAGTG+GGG - chr3_3:88126105-88126124 None:intergenic 35.0%
CACCTTATAAGGTGAATAAG+TGG - chr3_3:88126107-88126126 None:intergenic 35.0%
!!! TTTTTTGTCAGGTAGTCTAG+TGG - chr3_3:88126138-88126157 None:intergenic 35.0%
!!! TTTTTTGTCAGGTAGTCTAG+TGG - chr3_3:88126138-88126157 None:intergenic 35.0%
AAATGGTGAGAGGAAAAAAG+AGG - chr3_3:88126439-88126458 None:intergenic 35.0%
TAAGTTCATTGGCGACTATA+TGG - chr3_3:88126657-88126676 None:intergenic 35.0%
AAGGGATAATGCACAATATG+TGG + chr3_3:88126688-88126707 Msa0481770:intron 35.0%
GATAATGCACAATATGTGGA+GGG + chr3_3:88126692-88126711 Msa0481770:intron 35.0%
ATAATGCACAATATGTGGAG+GGG + chr3_3:88126693-88126712 Msa0481770:intron 35.0%
!!! TGGACCCACTCTTTTTTTTT+TGG - chr3_3:88126791-88126810 None:intergenic 35.0%
!! CATTTTACGAGTTGAGTTAG+AGG + chr3_3:88127055-88127074 Msa0481770:intron 35.0%
TGAGCAAGAATTGCTAAGTT+AGG - chr3_3:88127197-88127216 None:intergenic 35.0%
!! CAAGTAATTAGATGGGTTGA+GGG - chr3_3:88127484-88127503 None:intergenic 35.0%
!! ACAAGTAATTAGATGGGTTG+AGG - chr3_3:88127485-88127504 None:intergenic 35.0%
!! TGTGTTGTGTTTCTGGAAAA+TGG + chr3_3:88127577-88127596 Msa0481770:intron 35.0%
!! GTGTTGTGTTTCTGGAAAAT+GGG + chr3_3:88127578-88127597 Msa0481770:intron 35.0%
GGTTTAATTCTAGATCTCAG+CGG + chr3_3:88127621-88127640 Msa0481770:intron 35.0%
AAGTTACGAAACTACCTCAA+CGG - chr3_3:88127673-88127692 None:intergenic 35.0%
! CGTAACTTCCATGTGTTTTT+AGG + chr3_3:88127685-88127704 Msa0481770:intron 35.0%
GAATATCACAATAGACCCTT+TGG - chr3_3:88127772-88127791 None:intergenic 35.0%
TTGAACACTCGATAAAGTGT+GGG - chr3_3:88127917-88127936 None:intergenic 35.0%
ATTGAACACTCGATAAAGTG+TGG - chr3_3:88127918-88127937 None:intergenic 35.0%
! CGCACAATTGAAGTGTTAAT+CGG + chr3_3:88127944-88127963 Msa0481770:intron 35.0%
TGATTTAAGCAGGCAAATAG+TGG + chr3_3:88128533-88128552 Msa0481770:intron 35.0%
TACTCGTAAACAAAGGCTTT+AGG + chr3_3:88128646-88128665 Msa0481770:intron 35.0%
!! TTTATACATGTAGTTGGTGG+TGG + chr3_3:88128856-88128875 Msa0481770:intron 35.0%
ATTTAAACTTAGGGTGCGTT+TGG + chr3_3:88129093-88129112 Msa0481770:intron 35.0%
!!! ATCTTGGGACTATTTTTGAG+AGG - chr3_3:88129258-88129277 None:intergenic 35.0%
GATGGTCTATTATTGTTGGA+CGG + chr3_3:88129404-88129423 Msa0481770:intron 35.0%
ATGGTCTATTATTGTTGGAC+GGG + chr3_3:88129405-88129424 Msa0481770:intron 35.0%
TACCTCATTTCAAATCTTGC+TGG - chr3_3:88129919-88129938 None:intergenic 35.0%
TCCACTTATAAGGAGAAGTA+GGG - chr3_3:88130134-88130153 None:intergenic 35.0%
TTCCACTTATAAGGAGAAGT+AGG - chr3_3:88130135-88130154 None:intergenic 35.0%
! GAATTGATTCACAACTTGCT+TGG - chr3_3:88130292-88130311 None:intergenic 35.0%
AATTTATTGTGGAGCTAGGT+TGG - chr3_3:88130552-88130571 None:intergenic 35.0%
! AACAGAGTTGTCTTTGAGTT+CGG - chr3_3:88130613-88130632 None:intergenic 35.0%
! ACAACTCTGTTGACTATATC+AGG + chr3_3:88130622-88130641 Msa0481770:intron 35.0%
! CAACTCTGTTGACTATATCA+GGG + chr3_3:88130623-88130642 Msa0481770:intron 35.0%
! AACTCTGTTGACTATATCAG+GGG + chr3_3:88130624-88130643 Msa0481770:intron 35.0%
GATGGTACATTATAAACTCC+TGG - chr3_3:88130651-88130670 None:intergenic 35.0%
GGAGTTTATAATGTACCATC+TGG + chr3_3:88130651-88130670 Msa0481770:intron 35.0%
! AGGTATTGCATTATGACTCA+AGG + chr3_3:88130721-88130740 Msa0481770:intron 35.0%
GGTATTGCATTATGACTCAA+GGG + chr3_3:88130722-88130741 Msa0481770:intron 35.0%
!! ATTTTTGAGCTGCTCTATCA+AGG + chr3_3:88130786-88130805 Msa0481770:intron 35.0%
!! TTTTTGAGCTGCTCTATCAA+GGG + chr3_3:88130787-88130806 Msa0481770:intron 35.0%
TCACAGTGACAACTTTCAAA+TGG - chr3_3:88130822-88130841 None:intergenic 35.0%
ATCAACCTTAACAGTCTGTT+TGG + chr3_3:88131368-88131387 Msa0481770:intron 35.0%
TTCAACCAAACAGACTGTTA+AGG - chr3_3:88131376-88131395 None:intergenic 35.0%
CTCACAATAGAGAAGAAAGT+GGG + chr3_3:88131526-88131545 Msa0481770:intron 35.0%
TCACAATAGAGAAGAAAGTG+GGG + chr3_3:88131527-88131546 Msa0481770:intron 35.0%
GGGTAAAAAAGGAACAACAA+GGG - chr3_3:88131567-88131586 None:intergenic 35.0%
AGGGTAAAAAAGGAACAACA+AGG - chr3_3:88131568-88131587 None:intergenic 35.0%
AGATAGACCAACATTGGAAA+TGG + chr3_3:88131714-88131733 Msa0481770:intron 35.0%
GAAGTTGTGAAGAGAGAAAT+AGG - chr3_3:88132097-88132116 None:intergenic 35.0%
TCCAATGTGCGAATATAGTT+AGG + chr3_3:88132181-88132200 Msa0481770:intron 35.0%
CCAATGTGCGAATATAGTTA+GGG + chr3_3:88132182-88132201 Msa0481770:intron 35.0%
CATAAACTAAGATGCTTGTG+GGG - chr3_3:88132472-88132491 None:intergenic 35.0%
GCATAAACTAAGATGCTTGT+GGG - chr3_3:88132473-88132492 None:intergenic 35.0%
AGCATAAACTAAGATGCTTG+TGG - chr3_3:88132474-88132493 None:intergenic 35.0%
TGAATGGAAAATGTTCCACT+TGG - chr3_3:88132607-88132626 None:intergenic 35.0%
!! TAGTTGTTGTTTCTCATGCA+TGG - chr3_3:88132811-88132830 None:intergenic 35.0%
CTCACCGTCATAATAATCAT+CGG + chr3_3:88132951-88132970 Msa0481770:CDS 35.0%
GATGCCGATGATTATTATGA+CGG - chr3_3:88132958-88132977 None:intergenic 35.0%
TGTGTAGTTGAATTGGGTTA+AGG - chr3_3:88133045-88133064 None:intergenic 35.0%
TTAGAGCAAGATTGTAGTTG+AGG - chr3_3:88133082-88133101 None:intergenic 35.0%
! TAGATGCCAAGTCTTTTGTT+CGG - chr3_3:88133122-88133141 None:intergenic 35.0%
AACAACTTTCTCACCCTTAA+AGG - chr3_3:88133252-88133271 None:intergenic 35.0%
! GAGAAAGTTGTTGTTCTTAG+TGG + chr3_3:88133260-88133279 Msa0481770:CDS 35.0%
TCTTAGTGGTGATCAAAGTT+TGG + chr3_3:88133274-88133293 Msa0481770:CDS 35.0%
! TTTGGAGCTGAATAAAGAGA+AGG + chr3_3:88133292-88133311 Msa0481770:CDS 35.0%
CTGAATAAAGAGAAGGATTC+AGG + chr3_3:88133299-88133318 Msa0481770:CDS 35.0%
TGAAGATGTATCTTAAGGTG+AGG + chr3_3:88133339-88133358 Msa0481770:CDS 35.0%
TCTTAAGGTGAGGTTTAAGT+TGG + chr3_3:88133349-88133368 Msa0481770:CDS 35.0%
! CTTAAGGTGAGGTTTAAGTT+GGG + chr3_3:88133350-88133369 Msa0481770:CDS 35.0%
!!! AGTTGGGAGTTTTTAAGACA+AGG + chr3_3:88133366-88133385 Msa0481770:CDS 35.0%
CGTAACTCACATGTAATCTT+TGG - chr3_3:88133401-88133420 None:intergenic 35.0%
TTACGTGTTCCTTTGAATTC+TGG + chr3_3:88133416-88133435 Msa0481770:CDS 35.0%
! AGCAACAACAGCTTTTGCTT+CGG - chr3_3:88123163-88123182 None:intergenic 40.0%
! ACATAGAACTTGAAGGCATG+AGG - chr3_3:88123272-88123291 None:intergenic 40.0%
!!! TTTTTTGTTTGGGTTGCGAG+CGG - chr3_3:88123366-88123385 None:intergenic 40.0%
TGAACCTTCATAGAATGCTC+GGG - chr3_3:88123417-88123436 None:intergenic 40.0%
GAGCATTCTATGAAGGTTCA+AGG + chr3_3:88123417-88123436 Msa0481770:CDS 40.0%
AAGAGAAGTGATCCTATGAG+TGG + chr3_3:88123491-88123510 Msa0481770:CDS 40.0%
! CTATGAGTGGTGTTTTCTCA+GGG + chr3_3:88123504-88123523 Msa0481770:intron 40.0%
AGACTCGGGAATGTGATATT+TGG + chr3_3:88123632-88123651 Msa0481770:CDS 40.0%
GAAATCAACATCACACTTGG+TGG - chr3_3:88123741-88123760 None:intergenic 40.0%
!! TTGGCACAGCAGTATTGATT+GGG + chr3_3:88123789-88123808 Msa0481770:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr3_3:88124076-88124095 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr3_3:88124077-88124096 None:intergenic 40.0%
TTACTGTTAGTTACTCCCTC+CGG - chr3_3:88124211-88124230 None:intergenic 40.0%
!!! GGACATGTATTTTGAAACGG+TGG - chr3_3:88124531-88124550 None:intergenic 40.0%
TATGTGTGAAGTGGTTGACT+TGG - chr3_3:88124325-88124344 None:intergenic 40.0%
!! TTGAGTTGATGAGATGGTGT+TGG + chr3_3:88124608-88124627 Msa0481770:intron 40.0%
! GTCTTAAGTTTGACTTCCCT+TGG + chr3_3:88124664-88124683 Msa0481770:intron 40.0%
!!! ACTTCCCTTGGTGTCAATTT+TGG + chr3_3:88124676-88124695 Msa0481770:intron 40.0%
CACACCAAAATTGACACCAA+GGG - chr3_3:88124683-88124702 None:intergenic 40.0%
ACACACCAAAATTGACACCA+AGG - chr3_3:88124684-88124703 None:intergenic 40.0%
!! TGGTGTCAATTTTGGTGTGT+TGG + chr3_3:88124684-88124703 Msa0481770:intron 40.0%
GAATTAGACCCCGTATTAGT+TGG + chr3_3:88124753-88124772 Msa0481770:intron 40.0%
!! GTTTTGGTCAAATACCTTCC+TGG + chr3_3:88125102-88125121 Msa0481770:intron 40.0%
GGTTTCAGATAGGTCCTTAA+CGG + chr3_3:88125202-88125221 Msa0481770:intron 40.0%
CTTTCTATCAACCTCCGTTA+AGG - chr3_3:88125219-88125238 None:intergenic 40.0%
!! CTTAACGGAGGTTGATAGAA+AGG + chr3_3:88125217-88125236 Msa0481770:intron 40.0%
GCATTATTATATGCAGGGGT+TGG + chr3_3:88126062-88126081 Msa0481770:intron 40.0%
CCCCACTTATTCACCTTATA+AGG + chr3_3:88126102-88126121 Msa0481770:intron 40.0%
TGGCTAGGATTCACCTTATA+AGG - chr3_3:88126217-88126236 None:intergenic 40.0%
CCTAAAGTAGAAGGATTTGG+AGG - chr3_3:88126353-88126372 None:intergenic 40.0%
CCTCCAAATCCTTCTACTTT+AGG + chr3_3:88126350-88126369 Msa0481770:intron 40.0%
GGATAATGCACAATATGTGG+AGG + chr3_3:88126691-88126710 Msa0481770:intron 40.0%
!! TTTTTGGTCAAGTAGCCTAG+TGG - chr3_3:88126775-88126794 None:intergenic 40.0%
AAACTCACACACATAAGTGG+AGG + chr3_3:88126985-88127004 Msa0481770:intron 40.0%
!! GAGGTTCTAGACAAAATGTC+AGG + chr3_3:88127074-88127093 Msa0481770:intron 40.0%
TGTTTAGTCCCTGCAAATAG+AGG + chr3_3:88127380-88127399 Msa0481770:intron 40.0%
! GTTGAGTTGTGTTGTGTTTC+TGG + chr3_3:88127570-88127589 Msa0481770:intron 40.0%
ACAATAGACCCTTTGGTTAC+AGG - chr3_3:88127765-88127784 None:intergenic 40.0%
GGGTCTATTGTGATATTCGT+TGG + chr3_3:88127774-88127793 Msa0481770:intron 40.0%
AAAGATGTTATGAGCAGCGA+GGG + chr3_3:88127835-88127854 Msa0481770:intron 40.0%
!! GTGGGATTTTTCAACGGTAT+TGG - chr3_3:88127899-88127918 None:intergenic 40.0%
! TTGAAGTGTTAATCGGCTAC+AGG + chr3_3:88127951-88127970 Msa0481770:intron 40.0%
! TGTGGTTAGTTGTTTGAGTG+TGG + chr3_3:88128067-88128086 Msa0481770:intron 40.0%
! GTGGTTAGTTGTTTGAGTGT+GGG + chr3_3:88128068-88128087 Msa0481770:intron 40.0%
AACGATAATGCACGACTCTT+GGG - chr3_3:88128106-88128125 None:intergenic 40.0%
TCGTGCATTATCGTTGATCA+CGG + chr3_3:88128111-88128130 Msa0481770:intron 40.0%
AGCAACATGTTAACAAGGGA+AGG + chr3_3:88128266-88128285 Msa0481770:intron 40.0%
TGGTGGTTCATCCATGTAAT+TGG + chr3_3:88128962-88128981 Msa0481770:intron 40.0%
! CACCAGCAAGATTTGAAATG+AGG + chr3_3:88129914-88129933 Msa0481770:intron 40.0%
!! TGTTCCATGTAGGTATCGAA+TGG + chr3_3:88129968-88129987 Msa0481770:intron 40.0%
TTCACCATTCGATACCTACA+TGG - chr3_3:88129975-88129994 None:intergenic 40.0%
TTGGACACCTTGAGTTACAT+GGG - chr3_3:88130533-88130552 None:intergenic 40.0%
! ACAGAGTTGTCTTTGAGTTC+GGG - chr3_3:88130612-88130631 None:intergenic 40.0%
TCTTCTCATTCTTGTCCAGA+TGG - chr3_3:88130669-88130688 None:intergenic 40.0%
TTGCATTATGACTCAAGGGA+TGG + chr3_3:88130726-88130745 Msa0481770:intron 40.0%
TGCATTATGACTCAAGGGAT+GGG + chr3_3:88130727-88130746 Msa0481770:intron 40.0%
AGGAGACATAAAAAGGTGGT+GGG - chr3_3:88131508-88131527 None:intergenic 40.0%
TGTGAGGAGACATAAAAAGG+TGG - chr3_3:88131512-88131531 None:intergenic 40.0%
CCACTTTCTTCTCTATTGTG+AGG - chr3_3:88131528-88131547 None:intergenic 40.0%
CCTCACAATAGAGAAGAAAG+TGG + chr3_3:88131525-88131544 Msa0481770:intron 40.0%
CCCTAACTATATTCGCACAT+TGG - chr3_3:88132185-88132204 None:intergenic 40.0%
CTTGGAGTAGATAAGAAGAG+AGG - chr3_3:88132589-88132608 None:intergenic 40.0%
CTCTTCTTATCTACTCCAAG+TGG + chr3_3:88132589-88132608 Msa0481770:intron 40.0%
! AATAGAAGGGGAGGTATGAA+TGG - chr3_3:88132623-88132642 None:intergenic 40.0%
GTACGAGAGAAAAATAACGG+AGG - chr3_3:88132743-88132762 None:intergenic 40.0%
CGATGATTATTATGACGGTG+AGG - chr3_3:88132953-88132972 None:intergenic 40.0%
! AGATGCCAAGTCTTTTGTTC+GGG - chr3_3:88133121-88133140 None:intergenic 40.0%
! GGCTTTATACCATGATGCTA+GGG + chr3_3:88133163-88133182 Msa0481770:CDS 40.0%
CTTTCTCACCCTTAAAGGAA+GGG - chr3_3:88133247-88133266 None:intergenic 40.0%
ACTTTCTCACCCTTAAAGGA+AGG - chr3_3:88133248-88133267 None:intergenic 40.0%
! AACAACAGCTTTTGCTTCGG+TGG - chr3_3:88123160-88123179 None:intergenic 45.0%
GCTGTCTCTTCAGTTTCTTC+TGG + chr3_3:88123180-88123199 Msa0481770:CDS 45.0%
CTATGAAGGTTCAAGGTTCG+CGG + chr3_3:88123424-88123443 Msa0481770:CDS 45.0%
CCTGAGAAAACACCACTCAT+AGG - chr3_3:88123506-88123525 None:intergenic 45.0%
! CCTATGAGTGGTGTTTTCTC+AGG + chr3_3:88123503-88123522 Msa0481770:intron 45.0%
! GTGCCTATGGATCGTTTTCT+TGG + chr3_3:88123770-88123789 Msa0481770:intron 45.0%
GTGCCAAGAAAACGATCCAT+AGG - chr3_3:88123776-88123795 None:intergenic 45.0%
!! CTTGGCACAGCAGTATTGAT+TGG + chr3_3:88123788-88123807 Msa0481770:intron 45.0%
! GTGCATTGGTATGTGTGAAG+TGG - chr3_3:88124334-88124353 None:intergenic 45.0%
! TAGGTACCCTGAAGTCTTGT+AGG + chr3_3:88124835-88124854 Msa0481770:intron 45.0%
! AGGTACCCTGAAGTCTTGTA+GGG + chr3_3:88124836-88124855 Msa0481770:intron 45.0%
GAAACTTAAAGGACCCAGGA+AGG - chr3_3:88125119-88125138 None:intergenic 45.0%
ACGTGAAACTTAAAGGACCC+AGG - chr3_3:88125344-88125363 None:intergenic 45.0%
TTCAGATAGGTCCTTAACGG+AGG + chr3_3:88125205-88125224 Msa0481770:intron 45.0%
ACGTGAAACTTAAAGGACCC+AGG + chr3_3:88125344-88125363 Msa0481770:intron 45.0%
CGTGAAACTTAAAGGACCCA+GGG + chr3_3:88125345-88125364 Msa0481770:intron 45.0%
TTTAGGCCAAATACCTCCCT+GGG - chr3_3:88125364-88125383 None:intergenic 45.0%
TACCAACTGAGCTATGCTCA+CGG - chr3_3:88126035-88126054 None:intergenic 45.0%
! ATGAATAAGTGGGGTGTCCA+AGG - chr3_3:88126731-88126750 None:intergenic 45.0%
GATGAATTTCTCTCGCCACT+AGG + chr3_3:88126757-88126776 Msa0481770:intron 45.0%
GAAAGATGTTATGAGCAGCG+AGG + chr3_3:88127834-88127853 Msa0481770:intron 45.0%
ACGATAATGCACGACTCTTG+GGG - chr3_3:88128105-88128124 None:intergenic 45.0%
CAACGATAATGCACGACTCT+TGG - chr3_3:88128107-88128126 None:intergenic 45.0%
CAGAATGAACTCTCCAGATG+AGG + chr3_3:88128420-88128439 Msa0481770:intron 45.0%
!!! CGTTTGGCCCTACTTTTTTG+AGG + chr3_3:88129109-88129128 Msa0481770:intron 45.0%
AATTAATGCTTGGAGCTGGG+TGG + chr3_3:88129890-88129909 Msa0481770:intron 45.0%
ATTAATGCTTGGAGCTGGGT+GGG + chr3_3:88129891-88129910 Msa0481770:intron 45.0%
GCCCTACTTCTCCTTATAAG+TGG + chr3_3:88130130-88130149 Msa0481770:intron 45.0%
TGGACACCTTGAGTTACATG+GGG - chr3_3:88130532-88130551 None:intergenic 45.0%
GTTGGACACCTTGAGTTACA+TGG - chr3_3:88130534-88130553 None:intergenic 45.0%
! CAGAGTTGTCTTTGAGTTCG+GGG - chr3_3:88130611-88130630 None:intergenic 45.0%
GAGGAGACATAAAAAGGTGG+TGG - chr3_3:88131509-88131528 None:intergenic 45.0%
! CAGTGCCGAGAGATTATAGA+AGG - chr3_3:88131647-88131666 None:intergenic 45.0%
! GGTGGTTCGTTTTCGAAACA+CGG - chr3_3:88132435-88132454 None:intergenic 45.0%
TGTGGGGTTCGTTAAAGTGT+GGG - chr3_3:88132456-88132475 None:intergenic 45.0%
TTGTGGGGTTCGTTAAAGTG+TGG - chr3_3:88132457-88132476 None:intergenic 45.0%
CAACTAAACGGAGCCTACTA+CGG + chr3_3:88132825-88132844 Msa0481770:CDS 45.0%
! TGTAGGATCTTGTTGGTGGA+GGG - chr3_3:88132860-88132879 None:intergenic 45.0%
! TTGTAGGATCTTGTTGGTGG+AGG - chr3_3:88132861-88132880 None:intergenic 45.0%
!!! CAAGTCTTTTGTTCGGGTTG+CGG - chr3_3:88133115-88133134 None:intergenic 45.0%
ACTACGACTACATCGAAGCT+AGG + chr3_3:88133141-88133160 Msa0481770:CDS 45.0%
CTACGACTACATCGAAGCTA+GGG + chr3_3:88133142-88133161 Msa0481770:CDS 45.0%
! GGGCTTTATACCATGATGCT+AGG + chr3_3:88133162-88133181 Msa0481770:CDS 45.0%
TAGAGTCAACCCTAGCATCA+TGG - chr3_3:88133175-88133194 None:intergenic 45.0%
CGTGTTCCTTTGAATTCTGG+CGG + chr3_3:88133419-88133438 Msa0481770:CDS 45.0%
TTGAGGCTACCAAGTGTGAT+TGG + chr3_3:88133465-88133484 Msa0481770:CDS 45.0%
TGAGGCTACCAAGTGTGATT+GGG + chr3_3:88133466-88133485 Msa0481770:CDS 45.0%
TCAACGATCCCAATCACACT+TGG - chr3_3:88133477-88133496 None:intergenic 45.0%
!!! TTTTTTATATTACTTTAAAT+TGG + chr3_3:88126392-88126411 Msa0481770:intron 5.0%
!!! TTTTTATATTACTTTAAATT+GGG + chr3_3:88126393-88126412 Msa0481770:intron 5.0%
!!! TTAATATGTTTTTTTTATTA+AGG - chr3_3:88126623-88126642 None:intergenic 5.0%
!!! TTATTTTTTAATTTAAACTT+AGG + chr3_3:88129083-88129102 Msa0481770:intron 5.0%
!!! TATTTTTTAATTTAAACTTA+GGG + chr3_3:88129084-88129103 Msa0481770:intron 5.0%
!!! TAAATATTTTTAAAAACTAA+GGG - chr3_3:88131254-88131273 None:intergenic 5.0%
!!! AAAAAATTTTTTTTAATTTG+GGG + chr3_3:88131942-88131961 Msa0481770:intron 5.0%
! AACAGCTTTTGCTTCGGTGG+CGG - chr3_3:88123157-88123176 None:intergenic 50.0%
! GTGGTGTTTTCTCAGGGCAA+CGG + chr3_3:88123510-88123529 Msa0481770:intron 50.0%
AAGCTGAGTCAAGGTTGCAC+TGG - chr3_3:88123714-88123733 None:intergenic 50.0%
GGGTACCCTACAAGACTTCA+GGG - chr3_3:88124844-88124863 None:intergenic 50.0%
TGGGTACCCTACAAGACTTC+AGG - chr3_3:88124845-88124864 None:intergenic 50.0%
GAAACTTAAAGGACCCAGGG+AGG + chr3_3:88125348-88125367 Msa0481770:intron 50.0%
!! AAAGGACCCAGGGAGGTATT+TGG + chr3_3:88125355-88125374 Msa0481770:intron 50.0%
CTTTAGGCCAAATACCTCCC+TGG - chr3_3:88125365-88125384 None:intergenic 50.0%
! GTTTTCACGAACAAGCTCGC+TGG + chr3_3:88125566-88125585 Msa0481770:intron 50.0%
ACCAACTGAGCTATGCTCAC+GGG - chr3_3:88126034-88126053 None:intergenic 50.0%
GTGAGCATAGCTCAGTTGGT+AGG + chr3_3:88126034-88126053 Msa0481770:intron 50.0%
! GTGAATAAGTGGGGTGTCTG+GGG - chr3_3:88126096-88126115 None:intergenic 50.0%
! GGTGAATAAGTGGGGTGTCT+GGG - chr3_3:88126097-88126116 None:intergenic 50.0%
! AGGTGAATAAGTGGGGTGTC+TGG - chr3_3:88126098-88126117 None:intergenic 50.0%
TGTCAGGTAGTCTAGTGGCT+AGG - chr3_3:88126133-88126152 None:intergenic 50.0%
GTTAGGTCGGACGTCATGAT+CGG - chr3_3:88127027-88127046 None:intergenic 50.0%
CAGCGGTAGTTAACTACAGC+CGG + chr3_3:88127638-88127657 Msa0481770:intron 50.0%
ACCTCAACGGTAGAGCAAAC+CGG - chr3_3:88127660-88127679 None:intergenic 50.0%
TAGTGTGGGCCTGTAACCAA+AGG + chr3_3:88127753-88127772 Msa0481770:intron 50.0%
AGTGTGGGCCTGTAACCAAA+GGG + chr3_3:88127754-88127773 Msa0481770:intron 50.0%
AGGAACCCCCATGTAACTCA+AGG + chr3_3:88130523-88130542 Msa0481770:intron 50.0%
GGACACCTTGAGTTACATGG+GGG - chr3_3:88130531-88130550 None:intergenic 50.0%
! GTCTTTGAGTTCGGGGCTAA+TGG - chr3_3:88130604-88130623 None:intergenic 50.0%
GTTGACTATATCAGGGGACC+AGG + chr3_3:88130630-88130649 Msa0481770:intron 50.0%
GAGAAGAAAGTGGGGAGAGA+AGG + chr3_3:88131535-88131554 Msa0481770:intron 50.0%
! TTGTTGGTGGAGGGATTGCT+GGG - chr3_3:88132851-88132870 None:intergenic 50.0%
CGGTTGTAGGATCTTGTTGG+TGG - chr3_3:88132864-88132883 None:intergenic 50.0%
GGACGGTTGTAGGATCTTGT+TGG - chr3_3:88132867-88132886 None:intergenic 50.0%
GCATCGCAGTCTTCATCTTC+TGG + chr3_3:88132973-88132992 Msa0481770:CDS 50.0%
ACGTGGACTTTGACAGCGTT+GGG - chr3_3:88133011-88133030 None:intergenic 50.0%
TTAAGGTTGCGTCTGTGACG+TGG - chr3_3:88133028-88133047 None:intergenic 50.0%
CGCAACCCGAACAAAAGACT+TGG + chr3_3:88133113-88133132 Msa0481770:CDS 50.0%
GTTCCTTTGAATTCTGGCGG+TGG + chr3_3:88133422-88133441 Msa0481770:CDS 50.0%
GAACCACCGCCAGAATTCAA+AGG - chr3_3:88133428-88133447 None:intergenic 50.0%
!! TTGTGCTGGTGGTGGAATGG+CGG - chr3_3:88123123-88123142 None:intergenic 55.0%
!! AGGTTGTGCTGGTGGTGGAA+TGG - chr3_3:88123126-88123145 None:intergenic 55.0%
!! TTTTGCTTCGGTGGCGGTGA+GGG - chr3_3:88123151-88123170 None:intergenic 55.0%
GAGGCCCGAGCATTCTATGA+AGG + chr3_3:88123410-88123429 Msa0481770:CDS 55.0%
AGGTTCAAGGTTCGCGGATG+TGG + chr3_3:88123430-88123449 Msa0481770:CDS 55.0%
TCCCGTGAGCATAGCTCAGT+TGG + chr3_3:88126030-88126049 Msa0481770:intron 55.0%
GGTGTCCAAGGTTCGAACCT+CGG - chr3_3:88126719-88126738 None:intergenic 55.0%
! GGCTACAGGTGCTGCCATAA+TGG + chr3_3:88127965-88127984 Msa0481770:intron 55.0%
!! AGGAAGGGCGTTGGCTAAGT+CGG - chr3_3:88128350-88128369 None:intergenic 55.0%
GGGGTTCGTTAAAGTGTGGG+TGG - chr3_3:88132453-88132472 None:intergenic 55.0%
! CTTGTTGGTGGAGGGATTGC+TGG - chr3_3:88132852-88132871 None:intergenic 55.0%
TCCTACAACCGTCCATCTCG+TGG + chr3_3:88132873-88132892 Msa0481770:CDS 55.0%
TACAACCGTCCATCTCGTGG+CGG + chr3_3:88132876-88132895 Msa0481770:CDS 55.0%
GACGTGGACTTTGACAGCGT+TGG - chr3_3:88133012-88133031 None:intergenic 55.0%
!! TGTGCTGGTGGTGGAATGGC+GGG - chr3_3:88123122-88123141 None:intergenic 60.0%
TGAGGGTGAGGTTGTGCTGG+TGG - chr3_3:88123134-88123153 None:intergenic 60.0%
!! CTTTTGCTTCGGTGGCGGTG+AGG - chr3_3:88123152-88123171 None:intergenic 60.0%
GGTGGGCACAAGCTGAGTCA+AGG - chr3_3:88123723-88123742 None:intergenic 60.0%
CACAATATGTGGAGGGGCCG+AGG + chr3_3:88126699-88126718 Msa0481770:intron 60.0%
!! GCCGGTTTGCTCTACCGTTG+AGG + chr3_3:88127656-88127675 Msa0481770:intron 60.0%
!! GGAAGGGCGTTGGCTAAGTC+GGG - chr3_3:88128349-88128368 None:intergenic 60.0%
AGGGATTGCTGGGCCGTAGT+AGG - chr3_3:88132841-88132860 None:intergenic 60.0%
GCCACGAGATGGACGGTTGT+AGG - chr3_3:88132877-88132896 None:intergenic 60.0%
GAATTCTGGCGGTGGTTCGC+CGG + chr3_3:88133430-88133449 Msa0481770:CDS 60.0%
! TGGAATGGCGGGGCCGTAGT+AGG - chr3_3:88123111-88123130 None:intergenic 65.0%
!! GTGCTGGTGGTGGAATGGCG+GGG - chr3_3:88123121-88123140 None:intergenic 65.0%
! GGGTGAGGTTGTGCTGGTGG+TGG - chr3_3:88123131-88123150 None:intergenic 65.0%
CGGTGAGGGTGAGGTTGTGC+TGG - chr3_3:88123137-88123156 None:intergenic 65.0%
AGGGGCCGAGGTTCGAACCT+TGG + chr3_3:88126711-88126730 Msa0481770:intron 65.0%
CGGGGCTAATGGTGCCCTGA+AGG - chr3_3:88130593-88130612 None:intergenic 65.0%
AACCGTCCATCTCGTGGCGG+CGG + chr3_3:88132879-88132898 Msa0481770:CDS 65.0%
AACCGCCGCCACGAGATGGA+CGG - chr3_3:88132884-88132903 None:intergenic 65.0%
TCGAAACCGCCGCCACGAGA+TGG - chr3_3:88132888-88132907 None:intergenic 65.0%
GGCGGTTTCGACTGCTGCTG+CGG + chr3_3:88132897-88132916 Msa0481770:CDS 65.0%
GCCTCAAACCTACCACCCGC+CGG - chr3_3:88133452-88133471 None:intergenic 65.0%
! CTTCGGTGGCGGTGAGGGTG+AGG - chr3_3:88123146-88123165 None:intergenic 70.0%
TTCTGGCGGTGGTTCGCCGG+CGG + chr3_3:88133433-88133452 Msa0481770:CDS 70.0%
GCCGGCGGGTGGTAGGTTTG+AGG + chr3_3:88133448-88133467 Msa0481770:CDS 70.0%
TCTGGCGGTGGTTCGCCGGC+GGG + chr3_3:88133434-88133453 Msa0481770:CDS 75.0%
GTGGTTCGCCGGCGGGTGGT+AGG + chr3_3:88133441-88133460 Msa0481770:CDS 75.0%
! GGCGGTGGTTCGCCGGCGGG+TGG + chr3_3:88133437-88133456 Msa0481770:CDS 85.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 88123074 88133496 88123074 ID=Msa0481770;Name=Msa0481770
chr3_3 mRNA 88123074 88133496 88123074 ID=Msa0481770-mRNA-1;Parent=Msa0481770;Name=Msa0481770-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|0|0|4|0|431
chr3_3 exon 88123074 88123262 88123074 ID=Msa0481770-mRNA-1:exon:25644;Parent=Msa0481770-mRNA-1
chr3_3 exon 88123284 88123512 88123284 ID=Msa0481770-mRNA-1:exon:25645;Parent=Msa0481770-mRNA-1
chr3_3 exon 88123525 88123713 88123525 ID=Msa0481770-mRNA-1:exon:25646;Parent=Msa0481770-mRNA-1
chr3_3 exon 88132808 88133496 88132808 ID=Msa0481770-mRNA-1:exon:25647;Parent=Msa0481770-mRNA-1
chr3_3 CDS 88123074 88123262 88123074 ID=Msa0481770-mRNA-1:cds;Parent=Msa0481770-mRNA-1
chr3_3 CDS 88123284 88123512 88123284 ID=Msa0481770-mRNA-1:cds;Parent=Msa0481770-mRNA-1
chr3_3 CDS 88123525 88123713 88123525 ID=Msa0481770-mRNA-1:cds;Parent=Msa0481770-mRNA-1
chr3_3 CDS 88132808 88133496 88132808 ID=Msa0481770-mRNA-1:cds;Parent=Msa0481770-mRNA-1
Gene Sequence

>Msa0481770

ATGGCCGATAACAAACAACCACAATTAAATGGTGCCTACTACGGCCCCGCCATTCCACCACCAGCACAACCTCACCCTCACCGCCACCGAAGCAAAAGCTGTTGTTGCTGTCTCTTCAGTTTCTTCTGGAAGCTATTAGTCACACTCATCTTTCTTGCTGCACTCGTAGTCCTTATCTTCTATCTCATTTTCTATGTCAACGAAGCCAATCTAACAAAATTCGACTACAGAAACAACACACTACATTACAACATGGTGCTCAACTTCACCGCTCGCAACCCAAACAAAAAACTCAACTTCTATTACGACAAAGTTGAGGCCCGAGCATTCTATGAAGGTTCAAGGTTCGCGGATGTGGATGTGATCACAGCCATGAATTCATTCCGCCAATTTAAGAAGAGAAGTGATCCTATGAGTGGGCAACGGTTGTTGATGCTCGACAACGATCAAGTCTCTGAGTTCATCAAAGATAAGAGTGTTGAAGTTTATGATATCTATGTGAAACTCTACTTCGAAATTAGATTCAGACTCGGGAATGTGATATTTGGTCATTTCAATCCGAAAGTGAAATGTGACCTCAAAGTTCCTTTGAGTTCTAAGAATACCACCATGCATGAGAAACAACAACTAAACGGAGCCTACTACGGCCCAGCAATCCCTCCACCAACAAGATCCTACAACCGTCCATCTCGTGGCGGCGGTTTCGACTGCTGCTGCGGCTGTATCTTCAACCTAATATTCAAACTCATCCTCACCGTCATAATAATCATCGGCATCGCAGTCTTCATCTTCTGGCTCATAGTTCGTCCCAACGCTGTCAAAGTCCACGTCACAGACGCAACCTTAACCCAATTCAACTACACAAACAACAACAGCAACCTCAACTACAATCTTGCTCTAAATATAACAATCCGCAACCCGAACAAAAGACTTGGCATCTACTACGACTACATCGAAGCTAGGGCTTTATACCATGATGCTAGGGTTGACTCTATTTTTCTTGATCCTTTTTATCAAGGACATAAAACAACTAATTTTTTGAACCCTTCCTTTAAGGGTGAGAAAGTTGTTGTTCTTAGTGGTGATCAAAGTTTGGAGCTGAATAAAGAGAAGGATTCAGGTGTTTATGAGATTGATGTGAAGATGTATCTTAAGGTGAGGTTTAAGTTGGGAGTTTTTAAGACAAGGAAGATGAAGCCAAAGATTACATGTGAGTTACGTGTTCCTTTGAATTCTGGCGGTGGTTCGCCGGCGGGTGGTAGGTTTGAGGCTACCAAGTGTGATTGGGATCGTTGA

Protein sequence

>Msa0481770

MADNKQPQLNGAYYGPAIPPPAQPHPHRHRSKSCCCCLFSFFWKLLVTLIFLAALVVLIFYLIFYVNEANLTKFDYRNNTLHYNMVLNFTARNPNKKLNFYYDKVEARAFYEGSRFADVDVITAMNSFRQFKKRSDPMSGQRLLMLDNDQVSEFIKDKSVEVYDIYVKLYFEIRFRLGNVIFGHFNPKVKCDLKVPLSSKNTTMHEKQQLNGAYYGPAIPPPTRSYNRPSRGGGFDCCCGCIFNLIFKLILTVIIIIGIAVFIFWLIVRPNAVKVHVTDATLTQFNYTNNNSNLNYNLALNITIRNPNKRLGIYYDYIEARALYHDARVDSIFLDPFYQGHKTTNFLNPSFKGEKVVVLSGDQSLELNKEKDSGVYEIDVKMYLKVRFKLGVFKTRKMKPKITCELRVPLNSGGGSPAGGRFEATKCDWDR*