AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1134260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134260 MtrunA17_Chr7g0214661 97.216 970 16 3 1 960 1 969 0.0 1896
Msa1134260 MtrunA17_Chr7g0214591 84.286 140 10 1 29 168 17 144 6.23e-74 239
Msa1134260 MtrunA17_Chr1g0151921 52.074 217 88 3 3 203 5 221 8.35e-70 242
Msa1134260 MtrunA17_Chr1g0151921 46.835 79 37 1 788 866 447 520 8.88e-13 72.0
Msa1134260 MtrunA17_Chr7g0214601 94.030 67 3 1 207 273 1 66 3.45e-32 119
Msa1134260 MtrunA17_Chr7g0214581 78.049 82 10 1 545 626 1 74 1.61e-30 117
Msa1134260 MtrunA17_Chr4g0031511 33.562 146 93 2 12 153 16 161 3.60e-18 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134260 AT3G59290.1 45.512 1103 379 45 1 960 1 1024 0.0 677
Msa1134260 AT2G43160.3 49.026 924 291 35 1 875 1 793 0.0 655
Msa1134260 AT2G43160.2 49.026 924 291 35 1 875 1 793 0.0 655
Msa1134260 AT2G43160.5 49.026 924 291 35 1 875 1 793 0.0 655
Msa1134260 AT2G43160.1 49.026 924 291 35 1 875 1 793 0.0 655
Msa1134260 AT2G43160.4 54.364 653 195 23 1 602 1 601 0.0 549
Msa1134260 AT5G11710.2 51.754 228 95 4 3 215 5 232 7.48e-69 240
Msa1134260 AT5G11710.1 51.754 228 95 4 3 215 5 232 7.48e-69 240
Msa1134260 AT5G11710.3 51.754 228 95 4 3 215 5 232 7.48e-69 240
Msa1134260 AT3G23350.2 33.846 130 83 1 27 153 36 165 4.59e-14 74.3
Msa1134260 AT3G23350.1 33.846 130 83 1 27 153 35 164 5.15e-14 73.9
Msa1134260 AT3G46540.2 37.736 106 65 1 32 136 40 145 1.17e-12 70.1
Msa1134260 AT3G46540.3 37.736 106 65 1 32 136 4 109 1.21e-12 69.7
Msa1134260 AT3G46540.1 37.736 106 65 1 32 136 52 157 1.24e-12 70.5

Find 327 sgRNAs with CRISPR-Local

Find 567 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCCGACATGTCTAATTT+TGG 0.120905 7_4:-655724 Msa1134260:CDS
CCAGAACCCATCATCGAATT+TGG 0.156309 7_4:+654464 None:intergenic
TGTAACATCAACTGTAAATA+TGG 0.164903 7_4:-654549 Msa1134260:CDS
TATGAAAGTTCATACCTTTC+AGG 0.179618 7_4:+656952 None:intergenic
TCATACCTGATTGAAATTAT+TGG 0.180358 7_4:+656228 None:intergenic
GCTCCAACCACTTCTAATTT+TGG 0.186011 7_4:-656388 Msa1134260:CDS
TTCAACAACCAGAGCTTCTT+TGG 0.235438 7_4:-654959 Msa1134260:CDS
CAACCCTTTCCTTCTCATTC+TGG 0.236565 7_4:-655328 Msa1134260:CDS
GTTGAACCAGTGTTTGCTTC+AGG 0.238458 7_4:+656280 None:intergenic
TCTGGTCAACCTGGCATGCC+TGG 0.244292 7_4:-655310 Msa1134260:CDS
GGTTGAGAAACTAAAGAATT+TGG 0.251924 7_4:+654848 None:intergenic
TCAGTTGGATTATTGTTTAC+AGG 0.256532 7_4:+656775 None:intergenic
TTTGGGGTCACCCTTCTTTA+GGG 0.259399 7_4:-653980 Msa1134260:three_prime_UTR
GAATATCAGTTTCCGAATCT+TGG 0.282146 7_4:+655614 None:intergenic
TTGAACATTATTCTCATAGA+TGG 0.285330 7_4:-654193 Msa1134260:three_prime_UTR
AGATAGCAGTTTGGGCCTTT+TGG 0.285455 7_4:-660572 Msa1134260:five_prime_UTR
TTGACTTCGAATCCATTAAT+AGG 0.289742 7_4:-654607 Msa1134260:CDS
TTGAAACAAAATCAACAGTT+TGG 0.291455 7_4:-654811 Msa1134260:CDS
CAATCACAAAATGGATATAA+TGG 0.300667 7_4:-655142 Msa1134260:CDS
AACAGTTCAGCTCCTACTTT+TGG 0.301573 7_4:-655541 Msa1134260:CDS
TGACCAGTTGGTTCAGAAAA+TGG 0.305050 7_4:+655484 None:intergenic
GAAACTTTCTGAGCAAAATT+CGG 0.314709 7_4:-657025 Msa1134260:CDS
TTCTGGTATGGGCATGGGTA+TGG 0.316001 7_4:-654447 Msa1134260:CDS
CGGGATAGAATAACCTTACT+TGG 0.322909 7_4:-653926 Msa1134260:three_prime_UTR
ATATTTACAGTTGATGTTAC+AGG 0.336067 7_4:+654551 None:intergenic
CGGTTGTGCTGTTGGAGCTT+GGG 0.338820 7_4:+655054 None:intergenic
ATGTATTCTCAATCACAAAA+TGG 0.341820 7_4:-655151 Msa1134260:CDS
GGCAGAAGGCTGCTGTTAAT+AGG 0.348327 7_4:-659417 Msa1134260:CDS
TATGGGTATGGGTGGTATGG+GGG 0.348395 7_4:-654360 Msa1134260:CDS
GATAGAAATGGCTATGGTTA+TGG 0.348738 7_4:-658910 Msa1134260:CDS
ACTAATCCGTTAGCAGATAT+TGG 0.353426 7_4:-654632 Msa1134260:CDS
CTGGTTAATTTAAACATATC+TGG 0.356748 7_4:-654767 Msa1134260:CDS
GGGTATGGGTATGGGTGGTA+TGG 0.366177 7_4:-654363 Msa1134260:CDS
ATGGGTATGGGTGGTATGGG+GGG 0.366700 7_4:-654359 Msa1134260:CDS
TTTACCTTGCTTCCAGTGAT+TGG 0.366779 7_4:+657217 None:intergenic
CTTGTTGTCCAAAGAAGCTC+TGG 0.367203 7_4:+654951 None:intergenic
AAGGGTTTGTGCAGGTTGAT+TGG 0.371447 7_4:+655429 None:intergenic
AGCCTAACCTCTGCTCCTAC+TGG 0.373030 7_4:-656805 Msa1134260:CDS
AGAGAAAGGTTGAGTGTCAC+TGG 0.375866 7_4:+655657 None:intergenic
GTTCCGTTTGGATCTGAATC+AGG 0.378931 7_4:-661425 Msa1134260:intron
GGGCAATGCTCCCGGTGGTA+TGG 0.384752 7_4:-654420 Msa1134260:CDS
CCAAGCTCCAACAGCACAAC+CGG 0.387453 7_4:-655053 Msa1134260:CDS
TGCTCCCGGTGGTATGGGTA+TGG 0.390879 7_4:-654414 Msa1134260:CDS
CCTTCTCATTCTGGTCAACC+TGG 0.393221 7_4:-655319 Msa1134260:CDS
AAGAAAGTGCTCAAAGTTCC+TGG 0.395628 7_4:-660316 Msa1134260:CDS
AAACTTTCTGAGCAAAATTC+GGG 0.395642 7_4:-657024 Msa1134260:CDS
CCAAATTCGATGATGGGTTC+TGG 0.396774 7_4:-654464 Msa1134260:CDS
GACATCCATGGGTATGGGTA+TGG 0.397976 7_4:-654372 Msa1134260:CDS
CATTGGGAGCAGGCACTTGA+TGG 0.399820 7_4:+654897 None:intergenic
TCTGGTATGGGCATGGGTAT+GGG 0.400275 7_4:-654446 Msa1134260:CDS
TTCCATTAGGAGGTTGCATC+TGG 0.401445 7_4:+654315 None:intergenic
GAACCAGGAGGCATTCCATT+AGG 0.401518 7_4:+654302 None:intergenic
CCGGTTGTGCTGTTGGAGCT+TGG 0.402371 7_4:+655053 None:intergenic
TTAACGACACTGGCAAGAAT+TGG 0.403604 7_4:-659924 Msa1134260:CDS
GCAGAAGGCTGCTGTTAATA+GGG 0.404364 7_4:-659416 Msa1134260:CDS
GGTATGGGTATGGGTGGTAT+GGG 0.405295 7_4:-654362 Msa1134260:CDS
AAAGCTATGGGATCAGGTTC+AGG 0.405979 7_4:-654524 Msa1134260:CDS
TTGAACCAGTGTTTGCTTCA+GGG 0.407111 7_4:+656281 None:intergenic
TTCGATGATGGGTTCTGGTA+TGG 0.407415 7_4:-654459 Msa1134260:CDS
CCCATCATCGAATTTGGATT+AGG 0.408567 7_4:+654470 None:intergenic
AGAACATTCTTATCAAATAT+CGG 0.410125 7_4:-659693 Msa1134260:intron
ACGCACCAATTCGTTCCGTT+TGG 0.415550 7_4:-661437 Msa1134260:five_prime_UTR
AGTAGGCACTGGTATTGATA+TGG 0.415592 7_4:+654125 None:intergenic
TGAAACAAAATCAACAGTTT+GGG 0.420070 7_4:-654810 Msa1134260:CDS
TGTAAATATGGGTAAAGCTA+TGG 0.420888 7_4:-654537 Msa1134260:CDS
GTATGGGTATGGGTGGTATG+GGG 0.421351 7_4:-654361 Msa1134260:CDS
CCTCTTGTGCCCGCTACATC+AGG 0.422749 7_4:-656313 Msa1134260:CDS
TACCAGATGCAACCTCCTAA+TGG 0.425576 7_4:-654317 Msa1134260:CDS
AATATCAGTTTCCGAATCTT+GGG 0.428028 7_4:+655615 None:intergenic
TTGCCACAGGGATCCTCAAC+AGG 0.429401 7_4:-655097 Msa1134260:CDS
CGGCATTAAAACCATCTGAT+TGG 0.430216 7_4:+655740 None:intergenic
GAGATCAAGGAAACAATGTT+AGG 0.430825 7_4:-659498 Msa1134260:CDS
CTGGAGTAAGAGATGTATCC+AGG 0.431098 7_4:+655185 None:intergenic
GGAAAGGGTTGCTGTGCATA+TGG 0.432753 7_4:+655340 None:intergenic
CCAATGCTTGAGTGTGAACC+AGG 0.432826 7_4:+658982 None:intergenic
GGCATAGGTCGTGCTGGTGC+TGG 0.437369 7_4:-654503 Msa1134260:CDS
ACCTAATCCAAATTCGATGA+TGG 0.437810 7_4:-654471 Msa1134260:CDS
TAGAAGCTGAAAAGCCTGGC+TGG 0.438107 7_4:+655389 None:intergenic
AGATGATCATGTCAGTAGTC+TGG 0.438186 7_4:-659954 Msa1134260:CDS
GACGAGAACCCAGGCATGCC+AGG 0.440096 7_4:+655301 None:intergenic
TGGGTATGGGTGGTATGGGG+GGG 0.442031 7_4:-654358 Msa1134260:CDS
ACCTTCTTCATTGTAGCAGC+TGG 0.447293 7_4:+660530 None:intergenic
AACTGTGATGCTTGATCAGT+TGG 0.447537 7_4:+654980 None:intergenic
TTTGACAGTACTTGAGTACT+TGG 0.447802 7_4:-659753 Msa1134260:CDS
CCTGGGTTCTCGTCATCTAC+TGG 0.447849 7_4:-655292 Msa1134260:CDS
CTGGGAGCAGATGCAGAGTA+TGG 0.448787 7_4:+655676 None:intergenic
AGGCATGACATCCATGGGTA+TGG 0.450485 7_4:-654378 Msa1134260:CDS
GTTTCCTTGATCTCTTCCAC+TGG 0.451489 7_4:+659507 None:intergenic
GTTTCAAACTTATCTTTGGA+TGG 0.452212 7_4:+654827 None:intergenic
CTTGAGTACTTGGTGGCTCA+TGG 0.452669 7_4:-659743 Msa1134260:CDS
AAGAAAGAATCGTAGAGGTT+AGG 0.456321 7_4:-659438 Msa1134260:CDS
ATGGGAATGGGCAATGCTCC+CGG 0.457562 7_4:-654428 Msa1134260:CDS
ATGGGCATGGGTATGGGAAT+GGG 0.459007 7_4:-654440 Msa1134260:CDS
GTTTGGTGATTCACCATTCA+AGG 0.459359 7_4:-655824 Msa1134260:CDS
ATGGGTTCTGGTATGGGCAT+GGG 0.460258 7_4:-654452 Msa1134260:CDS
CACTCAAGCATTGGAAGCTA+TGG 0.466820 7_4:-658973 Msa1134260:CDS
CCAACAGCCTCTTCATAACT+AGG 0.467604 7_4:+656994 None:intergenic
GACAGTACTTGAGTACTTGG+TGG 0.468045 7_4:-659750 Msa1134260:CDS
TGGTCCAGATGAAGTTGAAA+AGG 0.468346 7_4:+655504 None:intergenic
CAGATCCAAACGGAACGAAT+TGG 0.468424 7_4:+661432 None:intergenic
TATGGGCATGGGTATGGGAA+TGG 0.468916 7_4:-654441 Msa1134260:CDS
GCAGCAGCAGTTACTTCAGT+TGG 0.469123 7_4:+656760 None:intergenic
CTGGTCAACCTGGCATGCCT+GGG 0.469496 7_4:-655309 Msa1134260:CDS
AAGAAGATCGTTATGCGAGC+AGG 0.469595 7_4:-658939 Msa1134260:CDS
GGCATTAAAACCATCTGATT+GGG 0.472191 7_4:+655741 None:intergenic
ATGGGTAAAGCTATGGGATC+AGG 0.472433 7_4:-654530 Msa1134260:CDS
GGCAATGCTCCCGGTGGTAT+GGG 0.473961 7_4:-654419 Msa1134260:CDS
GATGGGTTCTGGTATGGGCA+TGG 0.474191 7_4:-654453 Msa1134260:CDS
CGGTTACAGAGATGATGATA+GGG 0.474593 7_4:-658794 Msa1134260:CDS
GTAACATCAACTGTAAATAT+GGG 0.478597 7_4:-654548 Msa1134260:CDS
CAAAAGGTGGCTGCATAGAA+TGG 0.478813 7_4:+655269 None:intergenic
GGCTGGGAAAATTGACCACT+TGG 0.479333 7_4:+655406 None:intergenic
ATCACAAACTTTCCCCATCA+TGG 0.481463 7_4:-655025 Msa1134260:CDS
TCGCCAAAATTAGAAGTGGT+TGG 0.482153 7_4:+656385 None:intergenic
ATGGGTATATGATGAGCTAA+AGG 0.482711 7_4:+654916 None:intergenic
GGGAAAATTGACCACTTGGA+AGG 0.482889 7_4:+655410 None:intergenic
AGACTACTGACATGATCATC+TGG 0.483128 7_4:+659956 None:intergenic
ACGGTTACAGAGATGATGAT+AGG 0.483970 7_4:-658795 Msa1134260:CDS
GTAAATATGGGTAAAGCTAT+GGG 0.484647 7_4:-654536 Msa1134260:CDS
ACATCCATGGGTATGGGTAT+GGG 0.486043 7_4:-654371 Msa1134260:CDS
AGTTCATACCTTTCAGGCAC+AGG 0.488307 7_4:+656958 None:intergenic
ATTTGTGCCGGTTGTGCTGT+TGG 0.488539 7_4:+655046 None:intergenic
TCGTTATGGTAGAGATTATG+AGG 0.489581 7_4:-658833 Msa1134260:CDS
TCTCATCGGTATCCACCATA+TGG 0.490499 7_4:+654221 None:intergenic
ATTATAGTTACCTGGCATGT+TGG 0.492662 7_4:+654280 None:intergenic
TTCTGCTGTGATGTCATCTC+AGG 0.493420 7_4:+655562 None:intergenic
TTTACCTTCTGTTCAATGCC+AGG 0.495324 7_4:+660298 None:intergenic
CCTCCTAATGGAATGCCTCC+TGG 0.495524 7_4:-654305 Msa1134260:CDS
TGGGTCCAATAATTTCAATC+AGG 0.496058 7_4:-656233 Msa1134260:intron
TACGGTGAAGCATTGGGAGC+AGG 0.498349 7_4:+654887 None:intergenic
TGCTCAAAGCACCCTAAAGA+AGG 0.498537 7_4:+653969 None:intergenic
GATTCCAGTGGAAGAGATCA+AGG 0.499927 7_4:-659511 Msa1134260:CDS
GACCCACGTGGTCCTACATC+AGG 0.501026 7_4:-656670 Msa1134260:intron
TCGATGATGGGTTCTGGTAT+GGG 0.502187 7_4:-654458 Msa1134260:CDS
TATGGAAGAGAAAGAGAAAT+GGG 0.502207 7_4:-658892 Msa1134260:CDS
ATGGGTATGGGAGGTTACGG+AGG 0.502622 7_4:-654401 Msa1134260:CDS
CTCAGAGCCCTGTGCCTGAA+AGG 0.503032 7_4:-656966 Msa1134260:intron
AGTAAGCAATAACCCAAGTA+AGG 0.503609 7_4:+653913 None:intergenic
GCATGAGGGGACGAGCCTCT+TGG 0.505127 7_4:+656841 None:intergenic
GGTATGGGAGGTTACGGAGG+AGG 0.507832 7_4:-654398 Msa1134260:CDS
ATAGCATACGGTGAAGCATT+GGG 0.508701 7_4:+654881 None:intergenic
CTTCGAATCCATTAATAGGA+AGG 0.510293 7_4:-654603 Msa1134260:CDS
CGGAGGAGGCATGACATCCA+TGG 0.510517 7_4:-654384 Msa1134260:CDS
TGAACCAGTGTTTGCTTCAG+GGG 0.511259 7_4:+656282 None:intergenic
GCTCCCGGTGGTATGGGTAT+GGG 0.511770 7_4:-654413 Msa1134260:CDS
CCACTTGGAAGGGTTTGTGC+AGG 0.512945 7_4:+655421 None:intergenic
CTGTGCATATGGACTGGTAG+AGG 0.513809 7_4:+655351 None:intergenic
TAATAGGAAGGAAAAGAGAA+TGG 0.513835 7_4:-654591 Msa1134260:CDS
CAGAGCTTCTTTGGACAACA+AGG 0.516128 7_4:-654950 Msa1134260:CDS
TTATGGAAGAGAAAGAGAAA+TGG 0.516264 7_4:-658893 Msa1134260:CDS
GGTTATGCTCAACAGCCATA+TGG 0.517930 7_4:-654236 Msa1134260:CDS
TGCTACTAGCAATGAACCAT+GGG 0.518050 7_4:-660110 Msa1134260:CDS
AACTGGGAGTTAGCAGAGAA+AGG 0.518088 7_4:+655643 None:intergenic
GGAAAATTGACCACTTGGAA+GGG 0.518359 7_4:+655411 None:intergenic
GTCATCTCAGGTAATGGTGC+AGG 0.518666 7_4:+655574 None:intergenic
TGATGTTACAGGTGTGTTAG+TGG 0.518674 7_4:+654562 None:intergenic
AATCGCGATGGAGATCGTTA+TGG 0.526840 7_4:-658847 Msa1134260:CDS
GATGTTACAGGTGTGTTAGT+GGG 0.528282 7_4:+654563 None:intergenic
TAGTAGTCAACATCAACATT+CGG 0.530020 7_4:-654103 Msa1134260:three_prime_UTR
GGCTTTACCGAGACGAGTGT+TGG 0.530398 7_4:+658689 None:intergenic
ACTAGCAGCAACAGATGTAC+TGG 0.530914 7_4:+656738 None:intergenic
ATGTTATTATTATAGTTACC+TGG 0.532550 7_4:+654272 None:intergenic
AAGCAGTAGATCCTCCATGA+TGG 0.533157 7_4:+655011 None:intergenic
ATCCAGTAGGAGCAGAGGTT+AGG 0.535619 7_4:+656803 None:intergenic
CCTGGTTCACACTCAAGCAT+TGG 0.537566 7_4:-658982 Msa1134260:CDS
ACCTCCCATACCCATACCAC+CGG 0.537775 7_4:+654409 None:intergenic
CAGCACGAGCCAGCACCAAA+AGG 0.538632 7_4:+660557 None:intergenic
CAGCGTTGTGTACCAGTGAC+GGG 0.539082 7_4:-653945 Msa1134260:three_prime_UTR
AATAGCATACGGTGAAGCAT+TGG 0.539962 7_4:+654880 None:intergenic
GGTCAACTTACTCCTCATCA+AGG 0.540194 7_4:-655466 Msa1134260:CDS
AGGTTATTCTATCCCGTCAC+TGG 0.540940 7_4:+653933 None:intergenic
TGTTGATGTTGACTACTAGT+AGG 0.541373 7_4:+654108 None:intergenic
AGCAGTAGATCCTCCATGAT+GGG 0.542007 7_4:+655012 None:intergenic
AGTTCCTGGCATTGAACAGA+AGG 0.542788 7_4:-660302 Msa1134260:intron
ACAGAAGTATCAGCCTTGAA+TGG 0.544782 7_4:+655811 None:intergenic
GGTATGGGTATGGGAGGTTA+CGG 0.544805 7_4:-654404 Msa1134260:CDS
TGTGATGTCATCTCAGGTAA+TGG 0.544951 7_4:+655568 None:intergenic
CCTCCTGGTTCCAACATGCC+AGG 0.545416 7_4:-654290 Msa1134260:CDS
TGGGTATATGATGAGCTAAA+GGG 0.547010 7_4:+654917 None:intergenic
GTTGAAATTCCTGATGTAGC+GGG 0.547079 7_4:+656304 None:intergenic
TTGCAGGGATGTTGAAACTT+CGG 0.547701 7_4:-656875 Msa1134260:intron
CCTAATCCAAATTCGATGAT+GGG 0.547928 7_4:-654470 Msa1134260:CDS
TATAATGGATCTATGAACAG+TGG 0.548968 7_4:-655127 Msa1134260:CDS
AGCAGGGAGGAAGATAGAAA+TGG 0.551877 7_4:-658922 Msa1134260:CDS
AATGAACCATGGGGTCCTCA+TGG 0.552520 7_4:-660100 Msa1134260:CDS
TTGACCAGAATGAGAAGGAA+AGG 0.552922 7_4:+655324 None:intergenic
ATGGGATCAGGTTCAGGCAT+AGG 0.554092 7_4:-654518 Msa1134260:CDS
TGACCGCCTTGAGAAGCAAA+AGG 0.554824 7_4:+655253 None:intergenic
AGAGATTATGAGGAACGTTA+CGG 0.556905 7_4:-658823 Msa1134260:CDS
CATTATTCTCATAGATGGAA+AGG 0.557104 7_4:-654188 Msa1134260:three_prime_UTR
GAACTAGAAGCTGAAAAGCC+TGG 0.557523 7_4:+655385 None:intergenic
AATAATAACATGATGCGTCC+CGG 0.558590 7_4:-654260 Msa1134260:CDS
CTGGATACATCTCTTACTCC+AGG 0.559189 7_4:-655184 Msa1134260:CDS
AAATTATTGGACCCAGAGGA+TGG 0.560427 7_4:+656241 None:intergenic
CTACGGTGGATTGTACTCCC+TGG 0.560818 7_4:-655203 Msa1134260:CDS
ACTGCTTGCAGACATTGCTC+AGG 0.560991 7_4:-660074 Msa1134260:CDS
AGAAGCTGAAAAGCCTGGCT+GGG 0.561812 7_4:+655390 None:intergenic
TTACCTGGCATGTTGGAACC+AGG 0.564606 7_4:+654287 None:intergenic
TGAGGAGTAAGTTGACCAGT+TGG 0.567121 7_4:+655472 None:intergenic
TTTGGCGAAATAGATTTGCT+CGG 0.568793 7_4:-656370 Msa1134260:CDS
GGTTGTGCTGTTGGAGCTTG+GGG 0.568869 7_4:+655055 None:intergenic
TTTGGGCAGACACATTAAGC+AGG 0.569763 7_4:-654793 Msa1134260:CDS
CAGTGGGAACTACTTGCCAC+AGG 0.570242 7_4:-655110 Msa1134260:CDS
ACCAGCTGCTACAATGAAGA+AGG 0.570837 7_4:-660531 Msa1134260:exon
ACGACACTGGCAAGAATTGG+CGG 0.572387 7_4:-659921 Msa1134260:CDS
AATGTTCAATTCAATCTCAT+CGG 0.572591 7_4:+654207 None:intergenic
TTTCAATATATTGATTCCAG+TGG 0.573797 7_4:-659523 Msa1134260:CDS
GAATTGGCGGCATGTCTACA+AGG 0.575568 7_4:-659908 Msa1134260:intron
CCTGATGTAGCGGGCACAAG+AGG 0.575962 7_4:+656313 None:intergenic
GGTTCAGGCATAGGTCGTGC+TGG 0.577633 7_4:-654509 Msa1134260:CDS
TTCTTTCTTTATCATTCACA+AGG 0.578691 7_4:+659452 None:intergenic
AATCGTAGAGGTTAGGCAGA+AGG 0.578716 7_4:-659431 Msa1134260:CDS
AAGACCAATCACTGGAAGCA+AGG 0.579896 7_4:-657221 Msa1134260:intron
TAGTACTGCTGTTTCTACTC+AGG 0.580365 7_4:-656719 Msa1134260:CDS
TCAGCGTTGTGTACCAGTGA+CGG 0.580518 7_4:-653946 Msa1134260:three_prime_UTR
AGGATTATCACTTGCATGAG+GGG 0.581255 7_4:+656828 None:intergenic
GGCATGACATCCATGGGTAT+GGG 0.582541 7_4:-654377 Msa1134260:CDS
GAAGTTGAAAAGGAAGGTGA+AGG 0.582558 7_4:+655514 None:intergenic
TATTTCGCCAAAATTAGAAG+TGG 0.583832 7_4:+656381 None:intergenic
TGAGGTGCATGGTGTTGAGA+TGG 0.584126 7_4:+655778 None:intergenic
TGCTCCTCCTAGTTATGAAG+AGG 0.584725 7_4:-657001 Msa1134260:CDS
CCAGGAGGCATTCCATTAGG+AGG 0.584810 7_4:+654305 None:intergenic
GGAAAGTTTGTGATTTGTGC+CGG 0.585741 7_4:+655034 None:intergenic
GGTGAAGGTTGGCCAAAAGT+AGG 0.586008 7_4:+655529 None:intergenic
ATTATGATGATACAAGGAGC+AGG 0.587423 7_4:-658747 Msa1134260:CDS
TGACCAGAATGAGAAGGAAA+GGG 0.588561 7_4:+655325 None:intergenic
CCTAGTTATGAAGAGGCTGT+TGG 0.589371 7_4:-656994 Msa1134260:CDS
ATTGGGAGCAGGCACTTGAT+GGG 0.590677 7_4:+654898 None:intergenic
ATCTCAGGTAATGGTGCAGG+AGG 0.590753 7_4:+655577 None:intergenic
TTGAATGGTGAATCACCAAA+CGG 0.591233 7_4:+655826 None:intergenic
AGAAGATCCAGTAGGAGCAG+AGG 0.591613 7_4:+656798 None:intergenic
TAAAGTTGAAGACCAATCAC+TGG 0.591701 7_4:-657229 Msa1134260:CDS
GGAATCAATATATTGAAAGT+CGG 0.592291 7_4:+659528 None:intergenic
TTGTGAAGGAAAGCCTGTTG+AGG 0.592434 7_4:+655084 None:intergenic
GAGGAAGATAGAAATGGCTA+TGG 0.592967 7_4:-658916 Msa1134260:CDS
AGACACATTAAGCAGGGGAC+TGG 0.593975 7_4:-654786 Msa1134260:CDS
GCTTGGGGAGTCATTTGTGA+AGG 0.593976 7_4:+655070 None:intergenic
ACGATGGCCAACACTCGTCT+CGG 0.595349 7_4:-658696 Msa1134260:intron
ACCACCCATACCCATACCCA+TGG 0.596082 7_4:+654367 None:intergenic
GTAGGAGCAGAGGTTAGGCT+AGG 0.598670 7_4:+656808 None:intergenic
GAATAAACATACACCACACT+AGG 0.598796 7_4:+654034 None:intergenic
AGAAGATCGTTATGCGAGCA+GGG 0.603296 7_4:-658938 Msa1134260:CDS
GAACCTGATTCAGATCCAAA+CGG 0.604266 7_4:+661422 None:intergenic
TAGGATTATCACTTGCATGA+GGG 0.604332 7_4:+656827 None:intergenic
GAGAAAGGTTGAGTGTCACT+GGG 0.605764 7_4:+655658 None:intergenic
GTTCAGTAGTCTGAGGTGCA+TGG 0.605954 7_4:+655767 None:intergenic
ATAATGGATCTATGAACAGT+GGG 0.606177 7_4:-655126 Msa1134260:CDS
TTGGGCAGACACATTAAGCA+GGG 0.606341 7_4:-654792 Msa1134260:CDS
GTTCATACCTTTCAGGCACA+GGG 0.607284 7_4:+656959 None:intergenic
GGGATAGAATAACCTTACTT+GGG 0.607500 7_4:-653925 Msa1134260:three_prime_UTR
ATGCTACTAGCAATGAACCA+TGG 0.607785 7_4:-660111 Msa1134260:CDS
CCAGGTGGAATGTATAGACC+TGG 0.608193 7_4:-659000 Msa1134260:CDS
TTGAAAAGGAAGGTGAAGGT+TGG 0.609242 7_4:+655518 None:intergenic
GGAGGAGGCATGACATCCAT+GGG 0.610347 7_4:-654383 Msa1134260:CDS
CAACTTTACAGACCTGATGT+AGG 0.610482 7_4:+656658 None:intergenic
AGGTTTCGCAATAATACACC+AGG 0.613462 7_4:-659018 Msa1134260:CDS
GATGATCGGTACAATCGCGA+TGG 0.615288 7_4:-658859 Msa1134260:CDS
TAATATATCAAACCACCTGT+TGG 0.617109 7_4:+653863 None:intergenic
TGGCTGTTGAGCATAACCAC+CGG 0.617470 7_4:+654241 None:intergenic
TCAACCCCTGAAGCAAACAC+TGG 0.617887 7_4:-656286 Msa1134260:CDS
CCAGTAGATGACGAGAACCC+AGG 0.618209 7_4:+655292 None:intergenic
GCTCAAAGCACCCTAAAGAA+GGG 0.618694 7_4:+653970 None:intergenic
TCAATGCCAATATCTGCTAA+CGG 0.618831 7_4:+654626 None:intergenic
CTAGGATTATCACTTGCATG+AGG 0.619253 7_4:+656826 None:intergenic
TTAAAACCATCTGATTGGGA+TGG 0.619276 7_4:+655745 None:intergenic
GGTTGAAATTCCTGATGTAG+CGG 0.624098 7_4:+656303 None:intergenic
AAACCCAAAATTAGACATGT+CGG 0.624530 7_4:+655720 None:intergenic
ATTATGAGGAACGTTACGGT+AGG 0.625033 7_4:-658819 Msa1134260:CDS
CCAGGTTGACCAGAATGAGA+AGG 0.625884 7_4:+655319 None:intergenic
TTCTGTAAAGTGACCTAGTG+TGG 0.625999 7_4:-654047 Msa1134260:three_prime_UTR
CCAGGTCTATACATTCCACC+TGG 0.626376 7_4:+659000 None:intergenic
CCAGATGAAGTTGAAAAGGA+AGG 0.626716 7_4:+655508 None:intergenic
TATGCTCAACAGCCATATGG+TGG 0.626869 7_4:-654233 Msa1134260:CDS
ACTGAACCATCCCAATCAGA+TGG 0.626946 7_4:-655751 Msa1134260:CDS
CAAACAAGCGGTCATACCTA+CGG 0.628165 7_4:-655220 Msa1134260:CDS
TGTTGACTACTAGTAGGCAC+TGG 0.629763 7_4:+654114 None:intergenic
AGTGTTCCATGAGGACCCCA+TGG 0.630276 7_4:+660094 None:intergenic
ACTACAATTATGATGATACA+AGG 0.633869 7_4:-658753 Msa1134260:CDS
CCCGGTGGTATGGGTATGGG+AGG 0.634885 7_4:-654410 Msa1134260:CDS
TCCATGGGTATGGGTATGGG+TGG 0.636046 7_4:-654368 Msa1134260:CDS
GGGTCAAAGAAATCATCAGT+GGG 0.636273 7_4:+656688 None:intergenic
GGCTGTTGAGCATAACCACC+GGG 0.636968 7_4:+654242 None:intergenic
GAGGAACGTTACGGTAGGGA+CGG 0.637581 7_4:-658814 Msa1134260:CDS
GGTGCCGCTGAAATAGCATA+CGG 0.637836 7_4:+654869 None:intergenic
TGGAGTAAGAGATGTATCCA+GGG 0.638728 7_4:+655186 None:intergenic
TTTACAGGAGAAGATCCAGT+AGG 0.641156 7_4:+656790 None:intergenic
TGGGCTCTAGAGATGATGAT+CGG 0.644727 7_4:-658873 Msa1134260:CDS
TGGAAACGAATTAACGACAC+TGG 0.645325 7_4:-659934 Msa1134260:CDS
TGGGTCAAAGAAATCATCAG+TGG 0.653510 7_4:+656687 None:intergenic
TTATGAGGAACGTTACGGTA+GGG 0.653674 7_4:-658818 Msa1134260:CDS
TACAAACGAGCAGACTTCAG+CGG 0.653752 7_4:-657047 Msa1134260:intron
GGGTTGCTGTGCATATGGAC+TGG 0.655391 7_4:+655345 None:intergenic
AGACCTGATGTAGGACCACG+TGG 0.656943 7_4:+656667 None:intergenic
TGATAAAGAAAGAATCGTAG+AGG 0.663345 7_4:-659443 Msa1134260:CDS
TCGGCAGAATCTGCTCCAAG+AGG 0.664433 7_4:-656856 Msa1134260:CDS
CAATCTACTGCACAAACAAG+CGG 0.666091 7_4:-655232 Msa1134260:CDS
CCTCCCATACCCATACCACC+GGG 0.667619 7_4:+654410 None:intergenic
AACGGAACGAATTGGTGCGT+CGG 0.668463 7_4:+661440 None:intergenic
GCAGTAGATCCTCCATGATG+GGG 0.668568 7_4:+655013 None:intergenic
AGAGCTTCTTTGGACAACAA+GGG 0.670278 7_4:-654949 Msa1134260:CDS
ATAATAACAACACAGAAGAG+AGG 0.671180 7_4:-661530 Msa1134260:five_prime_UTR
ATTGAAATTATTGGACCCAG+AGG 0.671697 7_4:+656237 None:intergenic
AGTGGGAACTACTTGCCACA+GGG 0.674040 7_4:-655109 Msa1134260:CDS
GCAGCTGAGAAACCTTGATG+AGG 0.675499 7_4:+655454 None:intergenic
TTTCGCAATAATACACCAGG+TGG 0.675550 7_4:-659015 Msa1134260:CDS
CCGCCTTGAGAAGCAAAAGG+TGG 0.677466 7_4:+655256 None:intergenic
TGATGCTTGATCAGTTGGAG+AGG 0.677645 7_4:+654985 None:intergenic
GGTTACAGAGATGATGATAG+GGG 0.678995 7_4:-658793 Msa1134260:CDS
TGGGCAGACACATTAAGCAG+GGG 0.681536 7_4:-654791 Msa1134260:CDS
ACAGCCTCTTCATAACTAGG+AGG 0.683929 7_4:+656997 None:intergenic
GATGATTTCTTTGACCCACG+TGG 0.686453 7_4:-656682 Msa1134260:CDS
TGGGATGGTTCAGTAGTCTG+AGG 0.687217 7_4:+655760 None:intergenic
TTCACCGTATGCTATTTCAG+CGG 0.691527 7_4:-654873 Msa1134260:CDS
CCTGCACAAACCCTTCCAAG+TGG 0.692553 7_4:-655421 Msa1134260:CDS
ACAAGCGGTCATACCTACGG+TGG 0.694635 7_4:-655217 Msa1134260:CDS
CCTGGCATGTTGGAACCAGG+AGG 0.695127 7_4:+654290 None:intergenic
GATCGTGATTTCGATGACGA+TGG 0.695675 7_4:-658712 Msa1134260:CDS
CAGGGAGTACAATCCACCGT+AGG 0.701137 7_4:+655204 None:intergenic
GATGCTTGATCAGTTGGAGA+GGG 0.703924 7_4:+654986 None:intergenic
GGAATGGGCAATGCTCCCGG+TGG 0.716650 7_4:-654425 Msa1134260:CDS
AATAACATGATGCGTCCCGG+TGG 0.724789 7_4:-654257 Msa1134260:CDS
ACAAACTTTCCCCATCATGG+AGG 0.725140 7_4:-655022 Msa1134260:CDS
TCTGCAAGCAGTGTTCCATG+AGG 0.732421 7_4:+660085 None:intergenic
AGATCGTTATGCGAGCAGGG+AGG 0.744423 7_4:-658935 Msa1134260:CDS
AAGCCTGTTGAGGATCCCTG+TGG 0.751881 7_4:+655094 None:intergenic
GCTACTAGCAATGAACCATG+GGG 0.772068 7_4:-660109 Msa1134260:CDS
GACCTGATGTAGGACCACGT+GGG 0.783038 7_4:+656668 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGAATTTGTAAAATA+AGG + chr7_4:655303-655322 None:intergenic 10.0%
!!! ATAAATCTAAAATGATTTAA+AGG - chr7_4:656232-656251 Msa1134260:intron 10.0%
!!! ATTTTAAAAAAATCATCTTT+CGG + chr7_4:656856-656875 None:intergenic 10.0%
!!! TTTTATTTTTGTAAAAAAGT+TGG + chr7_4:657181-657200 None:intergenic 10.0%
!! TATTAAATTTATTGACAAAT+TGG - chr7_4:657525-657544 Msa1134260:intron 10.0%
!!! TTGATTAAATTTTTCTATGT+AGG - chr7_4:654414-654433 Msa1134260:CDS 15.0%
!! ACATAAAAATATAAATGTCT+CGG + chr7_4:654502-654521 None:intergenic 15.0%
!! TATATTAGCTAAACAAAAAT+CGG - chr7_4:654608-654627 Msa1134260:CDS 15.0%
!!! TTTACTAATTTATCGTTTTA+TGG - chr7_4:655019-655038 Msa1134260:CDS 15.0%
!!! TTACTAATTTATCGTTTTAT+GGG - chr7_4:655020-655039 Msa1134260:CDS 15.0%
!! GGTTATAATACATAAAATTA+AGG + chr7_4:655282-655301 None:intergenic 15.0%
!!! GGTTACATTATAATATTTTA+CGG + chr7_4:655887-655906 None:intergenic 15.0%
!! TATTCATAATTGGATTAAAA+TGG - chr7_4:657270-657289 Msa1134260:intron 15.0%
!!! AGAAATTTATTCTTATGTTT+TGG - chr7_4:657304-657323 Msa1134260:intron 15.0%
!!! TACATTGAAGTATTTATTAA+TGG - chr7_4:657596-657615 Msa1134260:intron 15.0%
!! AAATACATGCAAATTAATTA+GGG - chr7_4:657681-657700 Msa1134260:intron 15.0%
!! ATATTATATTGTATTTCCTT+TGG - chr7_4:658957-658976 Msa1134260:CDS 15.0%
!! TATTATATTGTATTTCCTTT+GGG - chr7_4:658958-658977 Msa1134260:CDS 15.0%
!!! TTGGTTTTCAATTTTTAAAA+AGG - chr7_4:659508-659527 Msa1134260:CDS 15.0%
!! TTATGATTATGCTTATGATT+AGG - chr7_4:654159-654178 Msa1134260:three_prime_UTR 20.0%
!!! TTGTGTATGAATTGATTTTT+TGG - chr7_4:654361-654380 Msa1134260:CDS 20.0%
!! GTATTATGTTTGTGATTAAT+TGG - chr7_4:654557-654576 Msa1134260:CDS 20.0%
!!! TTAATGTATAGTTGCTATTT+TGG - chr7_4:655049-655068 Msa1134260:CDS 20.0%
!!! TAATGTATAGTTGCTATTTT+GGG - chr7_4:655050-655069 Msa1134260:CDS 20.0%
!! TTTGAACAGAAGATAATAAT+TGG - chr7_4:655207-655226 Msa1134260:CDS 20.0%
!! AATATGATCACATGATAATA+TGG + chr7_4:655258-655277 None:intergenic 20.0%
!! AGAACATTCTTATCAAATAT+CGG - chr7_4:655778-655797 Msa1134260:CDS 20.0%
!! ACTAACAGCATATAAATATT+AGG + chr7_4:655828-655847 None:intergenic 20.0%
!!! AGGAATATTACATTTTTATC+AGG + chr7_4:655908-655927 None:intergenic 20.0%
!!! TGATTTTAGATTGAGTATAA+TGG + chr7_4:656400-656419 None:intergenic 20.0%
!!! ATTTTCTTAAACAATTTTCC+AGG - chr7_4:656433-656452 Msa1134260:intron 20.0%
!!! ATTTATCAGAGTTGATATAT+AGG + chr7_4:656806-656825 None:intergenic 20.0%
!!! GATGATTTTTTTAAAATGCT+TGG - chr7_4:656859-656878 Msa1134260:CDS 20.0%
!!! TTTTTTTCTTCTTTCTGAAT+TGG - chr7_4:656940-656959 Msa1134260:intron 20.0%
!! TTAAGCAATAACATAAAGTA+AGG + chr7_4:657129-657148 None:intergenic 20.0%
!! CTTTGATCTTTATTCATAAT+TGG - chr7_4:657260-657279 Msa1134260:intron 20.0%
!!! TCTTTATTGATTATTAGAGT+TGG + chr7_4:657397-657416 None:intergenic 20.0%
!! GAAATACATGCAAATTAATT+AGG - chr7_4:657680-657699 Msa1134260:intron 20.0%
!! TCAAAAAGGATCTTATAAAA+AGG - chr7_4:657741-657760 Msa1134260:intron 20.0%
!! GCATAATAATTTCTTAAACA+GGG + chr7_4:658891-658910 None:intergenic 20.0%
!! ATTATATTGTATTTCCTTTG+GGG - chr7_4:658959-658978 Msa1134260:CDS 20.0%
!! AAATGAATTTGTAAATGACT+TGG - chr7_4:659322-659341 Msa1134260:intron 20.0%
!!! TTTTGTTTCAAACTTATCTT+TGG + chr7_4:660651-660670 None:intergenic 20.0%
!! ATGTTATTATTATAGTTACC+TGG + chr7_4:661202-661221 None:intergenic 20.0%
!!! ACTACAATTCTTTTCTTTTT+TGG - chr7_4:661473-661492 Msa1134260:five_prime_UTR 20.0%
!!! CTACAATTCTTTTCTTTTTT+GGG - chr7_4:661474-661493 Msa1134260:five_prime_UTR 20.0%
!!! TACAATTCTTTTCTTTTTTG+GGG - chr7_4:661475-661494 Msa1134260:five_prime_UTR 20.0%
!! AGATTTTCACAACAACATAA+AGG + chr7_4:654674-654693 None:intergenic 25.0%
!! GTGCTTGAAAATATATCTTT+TGG - chr7_4:654791-654810 Msa1134260:CDS 25.0%
!! AATCTGAGCTTTAATTGAAT+CGG - chr7_4:654840-654859 Msa1134260:CDS 25.0%
!!! TTATTTTGTAGATAGCAGTT+TGG - chr7_4:654890-654909 Msa1134260:CDS 25.0%
!! TATTTTGTAGATAGCAGTTT+GGG - chr7_4:654891-654910 Msa1134260:CDS 25.0%
! AAGATAATAATTGGTGTGTA+AGG - chr7_4:655216-655235 Msa1134260:CDS 25.0%
! AATTTAGATGTCAAAGCTTA+CGG + chr7_4:655434-655453 None:intergenic 25.0%
!! ATGTCTACAAGGTATTAATT+CGG - chr7_4:655574-655593 Msa1134260:CDS 25.0%
! GGAATCAATATATTGAAAGT+CGG + chr7_4:655946-655965 None:intergenic 25.0%
!!! TTTCAATATATTGATTCCAG+TGG - chr7_4:655948-655967 Msa1134260:intron 25.0%
! TTCTTTCTTTATCATTCACA+AGG + chr7_4:656022-656041 None:intergenic 25.0%
!! TTCTAGTTATATAAAGCATC+AGG - chr7_4:656129-656148 Msa1134260:intron 25.0%
! ATTATGGATTTACCAAAACT+GGG + chr7_4:656190-656209 None:intergenic 25.0%
!! GCAAAATAAAGGATTTTCAT+TGG + chr7_4:656288-656307 None:intergenic 25.0%
! ACTACAATTATGATGATACA+AGG - chr7_4:656718-656737 Msa1134260:CDS 25.0%
!! AAATCATCTTTCGGATTTTA+TGG + chr7_4:656847-656866 None:intergenic 25.0%
!!! TTTTTTTAAAATGCTTGGCT+AGG - chr7_4:656864-656883 Msa1134260:CDS 25.0%
! ATGTCTACATAAATACTCAA+GGG + chr7_4:657010-657029 None:intergenic 25.0%
! AATAACATAAAGTAAGGATG+AGG + chr7_4:657123-657142 None:intergenic 25.0%
! AATTTCAAACTGAAAATGCT+TGG + chr7_4:657211-657230 None:intergenic 25.0%
! TATAGCACCTATATCATATA+TGG - chr7_4:657237-657256 Msa1134260:CDS 25.0%
! ATCAAAGCCATATATGATAT+AGG + chr7_4:657247-657266 None:intergenic 25.0%
! ATGCAGTTGAAAATTCAAAA+AGG - chr7_4:657727-657746 Msa1134260:intron 25.0%
!! TACAACATAAATGGTATTGA+GGG - chr7_4:657857-657876 Msa1134260:intron 25.0%
!!! TAACAACTCGTTTTTTTACA+CGG + chr7_4:657955-657974 None:intergenic 25.0%
! TGTTATGCTGAAGAATAATA+AGG - chr7_4:657970-657989 Msa1134260:intron 25.0%
! GAATTATCAGAATAGGATTA+TGG - chr7_4:658066-658085 Msa1134260:intron 25.0%
! GATAATATTCATAAGAGGTT+CGG + chr7_4:658572-658591 None:intergenic 25.0%
! ATCGAGATAATATTCATAAG+AGG + chr7_4:658577-658596 None:intergenic 25.0%
! CGCATAATAATTTCTTAAAC+AGG + chr7_4:658892-658911 None:intergenic 25.0%
! TCATACCTGATTGAAATTAT+TGG + chr7_4:659246-659265 None:intergenic 25.0%
!! GAATCTGTATGATTATTTCT+AGG - chr7_4:659264-659283 Msa1134260:intron 25.0%
!! TAGGTAGAATTCTGAAAAAT+TGG - chr7_4:659489-659508 Msa1134260:CDS 25.0%
! ATGTATTCTCAATCACAAAA+TGG - chr7_4:660320-660339 Msa1134260:CDS 25.0%
! CAATCACAAAATGGATATAA+TGG - chr7_4:660329-660348 Msa1134260:CDS 25.0%
! TTGAAACAAAATCAACAGTT+TGG - chr7_4:660660-660679 Msa1134260:intron 25.0%
! TGAAACAAAATCAACAGTTT+GGG - chr7_4:660661-660680 Msa1134260:intron 25.0%
! CTGGTTAATTTAAACATATC+TGG - chr7_4:660704-660723 Msa1134260:intron 25.0%
! ATTCTAATGTTGATCTTATC+TGG - chr7_4:660777-660796 Msa1134260:intron 25.0%
!! ATATTTACAGTTGATGTTAC+AGG + chr7_4:660923-660942 None:intergenic 25.0%
! TGTAACATCAACTGTAAATA+TGG - chr7_4:660922-660941 Msa1134260:intron 25.0%
! GTAACATCAACTGTAAATAT+GGG - chr7_4:660923-660942 Msa1134260:intron 25.0%
! AATGTTCAATTCAATCTCAT+CGG + chr7_4:661267-661286 None:intergenic 25.0%
! TTGAACATTATTCTCATAGA+TGG - chr7_4:661278-661297 Msa1134260:intron 25.0%
ATAATAACAACACAGAAGAG+AGG - chr7_4:653941-653960 Msa1134260:three_prime_UTR 30.0%
!!! ATTTGAATGTTTTAGCTGTG+AGG - chr7_4:654194-654213 Msa1134260:three_prime_UTR 30.0%
TCTTCAACATGAATCATTCA+AGG + chr7_4:654263-654282 None:intergenic 30.0%
! ATCTGAGCTTTTTATTGAGT+TGG - chr7_4:654690-654709 Msa1134260:intron 30.0%
!!! TTTTTATTGAGTTGGATACG+TGG - chr7_4:654698-654717 Msa1134260:intron 30.0%
TACGTGGAAAAAATTTGAAG+TGG - chr7_4:654714-654733 Msa1134260:intron 30.0%
CAATTAATGGTAACACTTAC+AGG + chr7_4:654988-655007 None:intergenic 30.0%
! ACCCTAATCCTATTTTGTAA+CGG - chr7_4:655091-655110 Msa1134260:CDS 30.0%
ATTTAGATGTCAAAGCTTAC+GGG + chr7_4:655433-655452 None:intergenic 30.0%
ATTCGGAATACTTTATGTTC+TGG - chr7_4:655591-655610 Msa1134260:CDS 30.0%
AATCAGTAAATGATGCAGAA+GGG + chr7_4:655628-655647 None:intergenic 30.0%
TGATAAAGAAAGAATCGTAG+AGG - chr7_4:656028-656047 Msa1134260:intron 30.0%
ATATCAGTAGAATTGTTGAG+AGG + chr7_4:656093-656112 None:intergenic 30.0%
!!! TTTTTAATTTCCCCCAGTTT+TGG - chr7_4:656175-656194 Msa1134260:intron 30.0%
TTATGGATTTACCAAAACTG+GGG + chr7_4:656189-656208 None:intergenic 30.0%
GATTATGGATTTACCAAAAC+TGG + chr7_4:656191-656210 None:intergenic 30.0%
GAAATAGAGAAGACAGATTA+TGG + chr7_4:656206-656225 None:intergenic 30.0%
TAATCTGTCTTCTCTATTTC+TGG - chr7_4:656206-656225 Msa1134260:intron 30.0%
GTATGACATGGAAAAATTGT+GGG - chr7_4:656335-656354 Msa1134260:CDS 30.0%
TTATGGAAGAGAAAGAGAAA+TGG - chr7_4:656578-656597 Msa1134260:intron 30.0%
TATGGAAGAGAAAGAGAAAT+GGG - chr7_4:656579-656598 Msa1134260:intron 30.0%
GCTTAAATGCTTAACTATTG+AGG + chr7_4:656985-657004 None:intergenic 30.0%
TGTCTACATAAATACTCAAG+GGG + chr7_4:657009-657028 None:intergenic 30.0%
GATGTCTACATAAATACTCA+AGG + chr7_4:657011-657030 None:intergenic 30.0%
TGAGTATTTATGTAGACATC+AGG - chr7_4:657011-657030 Msa1134260:CDS 30.0%
TATTAATCAAACGTCGTGTT+TGG + chr7_4:657065-657084 None:intergenic 30.0%
AAACACGACGTTTGATTAAT+AGG - chr7_4:657064-657083 Msa1134260:intron 30.0%
TCTAGAAGATTGCTTATTTC+CGG - chr7_4:657090-657109 Msa1134260:intron 30.0%
GCTTAAAGCTGATGAATTAT+AGG - chr7_4:657143-657162 Msa1134260:intron 30.0%
ACTAACTTTCTTAATTCCAG+TGG + chr7_4:657497-657516 None:intergenic 30.0%
TAATTAATCCTCTCTCTTGA+AGG + chr7_4:657571-657590 None:intergenic 30.0%
CAAGTAAGCTACAACATAAA+TGG - chr7_4:657848-657867 Msa1134260:intron 30.0%
CTACAACATAAATGGTATTG+AGG - chr7_4:657856-657875 Msa1134260:intron 30.0%
TTAGCATGATAAACAAAACG+AGG - chr7_4:657929-657948 Msa1134260:intron 30.0%
TTCTGATAATTCGATAGTCA+AGG + chr7_4:658058-658077 None:intergenic 30.0%
GACTATCGAATTATCAGAAT+AGG - chr7_4:658059-658078 Msa1134260:intron 30.0%
! TTTATGCAATGTTTTCTCAG+AGG - chr7_4:658210-658229 Msa1134260:intron 30.0%
GAAACTTTCTGAGCAAAATT+CGG - chr7_4:658446-658465 Msa1134260:intron 30.0%
AAACTTTCTGAGCAAAATTC+GGG - chr7_4:658447-658466 Msa1134260:intron 30.0%
TATGAAAGTTCATACCTTTC+AGG + chr7_4:658522-658541 None:intergenic 30.0%
ATGAATATTATCTCGATTGC+AGG - chr7_4:658580-658599 Msa1134260:intron 30.0%
TGAATATTATCTCGATTGCA+GGG - chr7_4:658581-658600 Msa1134260:intron 30.0%
TCAGTTGGATTATTGTTTAC+AGG + chr7_4:658699-658718 None:intergenic 30.0%
TTCAACATTATCCCATTAAG+CGG + chr7_4:659033-659052 None:intergenic 30.0%
TATTTCGCCAAAATTAGAAG+TGG + chr7_4:659093-659112 None:intergenic 30.0%
ATGCACGCTAAATCAAAAAA+GGG + chr7_4:659381-659400 None:intergenic 30.0%
TATGCACGCTAAATCAAAAA+AGG + chr7_4:659382-659401 None:intergenic 30.0%
AGGTTTATTATCATGCCATA+TGG + chr7_4:659450-659469 None:intergenic 30.0%
ATATGGCATGATAATAAACC+TGG - chr7_4:659449-659468 Msa1134260:CDS 30.0%
TTATTCAAAGCTAAGAACTG+AGG + chr7_4:659541-659560 None:intergenic 30.0%
AAACCCAAAATTAGACATGT+CGG + chr7_4:659754-659773 None:intergenic 30.0%
!!! ACATGTCTAATTTTGGGTTT+GGG - chr7_4:659754-659773 Msa1134260:CDS 30.0%
AATATCAGTTTCCGAATCTT+GGG + chr7_4:659859-659878 None:intergenic 30.0%
!! TATAATGGATCTATGAACAG+TGG - chr7_4:660344-660363 Msa1134260:intron 30.0%
!! ATAATGGATCTATGAACAGT+GGG - chr7_4:660345-660364 Msa1134260:intron 30.0%
GGTTGAGAAACTAAAGAATT+TGG + chr7_4:660626-660645 None:intergenic 30.0%
GTTTCAAACTTATCTTTGGA+TGG + chr7_4:660647-660666 None:intergenic 30.0%
AGAGCATAATAGTTAACAGT+AGG + chr7_4:660804-660823 None:intergenic 30.0%
TTGACTTCGAATCCATTAAT+AGG - chr7_4:660864-660883 Msa1134260:intron 30.0%
! TCTCTTTTCCTTCCTATTAA+TGG + chr7_4:660879-660898 None:intergenic 30.0%
TAATAGGAAGGAAAAGAGAA+TGG - chr7_4:660880-660899 Msa1134260:intron 30.0%
TGTAAATATGGGTAAAGCTA+TGG - chr7_4:660934-660953 Msa1134260:intron 30.0%
GTAAATATGGGTAAAGCTAT+GGG - chr7_4:660935-660954 Msa1134260:intron 30.0%
CATTATTCTCATAGATGGAA+AGG - chr7_4:661283-661302 Msa1134260:intron 30.0%
TAGTAGTCAACATCAACATT+CGG - chr7_4:661368-661387 Msa1134260:intron 30.0%
! GTTGGTGTTCAAAAAATAAG+AGG + chr7_4:661593-661612 None:intergenic 30.0%
!!! CTTATTTTTTGAACACCAAC+AGG - chr7_4:661593-661612 Msa1134260:five_prime_UTR 30.0%
TAATATATCAAACCACCTGT+TGG + chr7_4:661611-661630 None:intergenic 30.0%
GCAAGATCGAAGAAATGAAA+TGG + chr7_4:654094-654113 None:intergenic 35.0%
!!! TGAGTTTTTGAGATGTGATG+TGG - chr7_4:654309-654328 Msa1134260:CDS 35.0%
TACGTAGCAAAAATTTGACG+TGG - chr7_4:654864-654883 Msa1134260:CDS 35.0%
! GCTACAATGAAGAAGGTTTT+TGG - chr7_4:654947-654966 Msa1134260:CDS 35.0%
!!! AGGTTTTTGGTCAAACTGTT+AGG - chr7_4:654960-654979 Msa1134260:CDS 35.0%
!!! GGTTTTTGGTCAAACTGTTA+GGG - chr7_4:654961-654980 Msa1134260:CDS 35.0%
GCCGTTACAAAATAGGATTA+GGG + chr7_4:655095-655114 None:intergenic 35.0%
AGCCGTTACAAAATAGGATT+AGG + chr7_4:655096-655115 None:intergenic 35.0%
AGAGTTAGCCGTTACAAAAT+AGG + chr7_4:655102-655121 None:intergenic 35.0%
CAATCAGTAAATGATGCAGA+AGG + chr7_4:655629-655648 None:intergenic 35.0%
TTTGACAGTACTTGAGTACT+TGG - chr7_4:655718-655737 Msa1134260:CDS 35.0%
GAGATCAAGGAAACAATGTT+AGG - chr7_4:655973-655992 Msa1134260:intron 35.0%
AAGAAAGAATCGTAGAGGTT+AGG - chr7_4:656033-656052 Msa1134260:intron 35.0%
TATGGATTTACCAAAACTGG+GGG + chr7_4:656188-656207 None:intergenic 35.0%
GGTATGACATGGAAAAATTG+TGG - chr7_4:656334-656353 Msa1134260:CDS 35.0%
GATAGAAATGGCTATGGTTA+TGG - chr7_4:656561-656580 Msa1134260:intron 35.0%
TCGTTATGGTAGAGATTATG+AGG - chr7_4:656638-656657 Msa1134260:intron 35.0%
AGAGATTATGAGGAACGTTA+CGG - chr7_4:656648-656667 Msa1134260:intron 35.0%
ATTATGATGATACAAGGAGC+AGG - chr7_4:656724-656743 Msa1134260:CDS 35.0%
TCTACATAAATACTCAAGGG+GGG + chr7_4:657007-657026 None:intergenic 35.0%
GTCTACATAAATACTCAAGG+GGG + chr7_4:657008-657027 None:intergenic 35.0%
GATTATTAGAGTTGGCAACT+GGG + chr7_4:657389-657408 None:intergenic 35.0%
TGATTATTAGAGTTGGCAAC+TGG + chr7_4:657390-657409 None:intergenic 35.0%
AATTCCAGTGGTTTACTCAA+GGG + chr7_4:657485-657504 None:intergenic 35.0%
TAATTCCAGTGGTTTACTCA+AGG + chr7_4:657486-657505 None:intergenic 35.0%
AACATTATCCTTCAAGAGAG+AGG - chr7_4:657560-657579 Msa1134260:intron 35.0%
CATGACTACAGACTCTAAAT+GGG + chr7_4:658015-658034 None:intergenic 35.0%
ACATGACTACAGACTCTAAA+TGG + chr7_4:658016-658035 None:intergenic 35.0%
CAGAATAGGATTATGGCTTT+AGG - chr7_4:658073-658092 Msa1134260:intron 35.0%
TAAAGTTGAAGACCAATCAC+TGG - chr7_4:658242-658261 Msa1134260:intron 35.0%
GGTATGAACTTTCATACAAG+AGG - chr7_4:658526-658545 Msa1134260:intron 35.0%
TAGGATTATCACTTGCATGA+GGG + chr7_4:658647-658666 None:intergenic 35.0%
TCAACATTATCCCATTAAGC+GGG + chr7_4:659032-659051 None:intergenic 35.0%
! TTTGGCGAAATAGATTTGCT+CGG - chr7_4:659101-659120 Msa1134260:intron 35.0%
ATTGAAATTATTGGACCCAG+AGG + chr7_4:659237-659256 None:intergenic 35.0%
TGGGTCCAATAATTTCAATC+AGG - chr7_4:659238-659257 Msa1134260:intron 35.0%
ACGCTAAATCAAAAAAGGGT+GGG + chr7_4:659377-659396 None:intergenic 35.0%
CATAACTGTAACTAGTGTGT+GGG - chr7_4:659398-659417 Msa1134260:intron 35.0%
TTGAATGGTGAATCACCAAA+CGG + chr7_4:659648-659667 None:intergenic 35.0%
TTAAAACCATCTGATTGGGA+TGG + chr7_4:659729-659748 None:intergenic 35.0%
GGCATTAAAACCATCTGATT+GGG + chr7_4:659733-659752 None:intergenic 35.0%
! AATGCCGACATGTCTAATTT+TGG - chr7_4:659747-659766 Msa1134260:CDS 35.0%
! ATGCCGACATGTCTAATTTT+GGG - chr7_4:659748-659767 Msa1134260:CDS 35.0%
!!! GACATGTCTAATTTTGGGTT+TGG - chr7_4:659753-659772 Msa1134260:CDS 35.0%
!!! CATGTCTAATTTTGGGTTTG+GGG - chr7_4:659755-659774 Msa1134260:CDS 35.0%
GAATATCAGTTTCCGAATCT+TGG + chr7_4:659860-659879 None:intergenic 35.0%
TGGGTATATGATGAGCTAAA+GGG + chr7_4:660557-660576 None:intergenic 35.0%
ATGGGTATATGATGAGCTAA+AGG + chr7_4:660558-660577 None:intergenic 35.0%
ACTAATCCGTTAGCAGATAT+TGG - chr7_4:660839-660858 Msa1134260:intron 35.0%
TCAATGCCAATATCTGCTAA+CGG + chr7_4:660848-660867 None:intergenic 35.0%
CTTCGAATCCATTAATAGGA+AGG - chr7_4:660868-660887 Msa1134260:intron 35.0%
ACCTAATCCAAATTCGATGA+TGG - chr7_4:661000-661019 Msa1134260:intron 35.0%
CCTAATCCAAATTCGATGAT+GGG - chr7_4:661001-661020 Msa1134260:intron 35.0%
ATTATAGTTACCTGGCATGT+TGG + chr7_4:661194-661213 None:intergenic 35.0%
AATAATAACATGATGCGTCC+CGG - chr7_4:661211-661230 Msa1134260:intron 35.0%
! TGTTGATGTTGACTACTAGT+AGG + chr7_4:661366-661385 None:intergenic 35.0%
GAATAAACATACACCACACT+AGG + chr7_4:661440-661459 None:intergenic 35.0%
GGGATAGAATAACCTTACTT+GGG - chr7_4:661546-661565 Msa1134260:five_prime_UTR 35.0%
AGTAAGCAATAACCCAAGTA+AGG + chr7_4:661561-661580 None:intergenic 35.0%
!!! ATTTTTTGAACACCAACAGG+TGG - chr7_4:661596-661615 Msa1134260:five_prime_UTR 35.0%
GAACCTGATTCAGATCCAAA+CGG + chr7_4:654052-654071 None:intergenic 40.0%
TTGAGATGTGATGTGGTGTT+TGG - chr7_4:654316-654335 Msa1134260:CDS 40.0%
AGCTAACCATCAATCGAGAA+CGG - chr7_4:654769-654788 Msa1134260:CDS 40.0%
!! AAGAAAGTGCTCAAAGTTCC+TGG - chr7_4:655155-655174 Msa1134260:CDS 40.0%
TTTACCTTCTGTTCAATGCC+AGG + chr7_4:655176-655195 None:intergenic 40.0%
ATGCTACTAGCAATGAACCA+TGG - chr7_4:655360-655379 Msa1134260:CDS 40.0%
TGCTACTAGCAATGAACCAT+GGG - chr7_4:655361-655380 Msa1134260:CDS 40.0%
ATCTGGTATTCATGACTGCA+GGG + chr7_4:655501-655520 None:intergenic 40.0%
AGACTACTGACATGATCATC+TGG + chr7_4:655518-655537 None:intergenic 40.0%
AGATGATCATGTCAGTAGTC+TGG - chr7_4:655517-655536 Msa1134260:CDS 40.0%
TGGAAACGAATTAACGACAC+TGG - chr7_4:655537-655556 Msa1134260:CDS 40.0%
TTAACGACACTGGCAAGAAT+TGG - chr7_4:655547-655566 Msa1134260:CDS 40.0%
ACTGCTCACTGTTCATTAAC+AGG - chr7_4:655694-655713 Msa1134260:CDS 40.0%
CTGTTAGTCAATTTCCACAC+AGG - chr7_4:655840-655859 Msa1134260:CDS 40.0%
ACGGTCATTTGATCGAAACT+AGG + chr7_4:655868-655887 None:intergenic 40.0%
! TGGGTGTTGTGGCAAAATAA+AGG + chr7_4:656299-656318 None:intergenic 40.0%
TACCACCAGTTACAAGAGTT+GGG + chr7_4:656318-656337 None:intergenic 40.0%
ATACCACCAGTTACAAGAGT+TGG + chr7_4:656319-656338 None:intergenic 40.0%
TTGTAACTGGTGGTATGACA+TGG - chr7_4:656323-656342 Msa1134260:CDS 40.0%
TGGTGTATTATTGCGAAACC+TGG + chr7_4:656454-656473 None:intergenic 40.0%
AGGTTTCGCAATAATACACC+AGG - chr7_4:656453-656472 Msa1134260:intron 40.0%
TTTCGCAATAATACACCAGG+TGG - chr7_4:656456-656475 Msa1134260:intron 40.0%
GAGGAAGATAGAAATGGCTA+TGG - chr7_4:656555-656574 Msa1134260:intron 40.0%
ATTATGAGGAACGTTACGGT+AGG - chr7_4:656652-656671 Msa1134260:intron 40.0%
TTATGAGGAACGTTACGGTA+GGG - chr7_4:656653-656672 Msa1134260:intron 40.0%
ACGGTTACAGAGATGATGAT+AGG - chr7_4:656676-656695 Msa1134260:CDS 40.0%
CGGTTACAGAGATGATGATA+GGG - chr7_4:656677-656696 Msa1134260:CDS 40.0%
GGTTACAGAGATGATGATAG+GGG - chr7_4:656678-656697 Msa1134260:CDS 40.0%
! GTAGACATCAGGATTTTCGA+TGG - chr7_4:657022-657041 Msa1134260:CDS 40.0%
CATAAAGTAAGGATGAGGCT+AGG + chr7_4:657118-657137 None:intergenic 40.0%
CCAAAGCAACAAATCTAAGC+AGG + chr7_4:657343-657362 None:intergenic 40.0%
!! CCTGCTTAGATTTGTTGCTT+TGG - chr7_4:657340-657359 Msa1134260:intron 40.0%
ATTCCAGTGGTTTACTCAAG+GGG + chr7_4:657484-657503 None:intergenic 40.0%
TTTACCTTGCTTCCAGTGAT+TGG + chr7_4:658257-658276 None:intergenic 40.0%
TGAACTTTCATACAAGAGGC+TGG - chr7_4:658530-658549 Msa1134260:intron 40.0%
TTGCAGGGATGTTGAAACTT+CGG - chr7_4:658596-658615 Msa1134260:intron 40.0%
AGGATTATCACTTGCATGAG+GGG + chr7_4:658646-658665 None:intergenic 40.0%
CTAGGATTATCACTTGCATG+AGG + chr7_4:658648-658667 None:intergenic 40.0%
TTTACAGGAGAAGATCCAGT+AGG + chr7_4:658684-658703 None:intergenic 40.0%
!! TAGTACTGCTGTTTCTACTC+AGG - chr7_4:658752-658771 Msa1134260:CDS 40.0%
GGGTCAAAGAAATCATCAGT+GGG + chr7_4:658786-658805 None:intergenic 40.0%
TGGGTCAAAGAAATCATCAG+TGG + chr7_4:658787-658806 None:intergenic 40.0%
CAACTTTACAGACCTGATGT+AGG + chr7_4:658816-658835 None:intergenic 40.0%
! TTGTATTTCCTTTGGGGAGT+TGG - chr7_4:658965-658984 Msa1134260:CDS 40.0%
! TTGTAATTTGCCCCGCTTAA+TGG - chr7_4:659018-659037 Msa1134260:CDS 40.0%
! TGTAATTTGCCCCGCTTAAT+GGG - chr7_4:659019-659038 Msa1134260:CDS 40.0%
CAACATTATCCCATTAAGCG+GGG + chr7_4:659031-659050 None:intergenic 40.0%
! GCTCCAACCACTTCTAATTT+TGG - chr7_4:659083-659102 Msa1134260:intron 40.0%
TCGCCAAAATTAGAAGTGGT+TGG + chr7_4:659089-659108 None:intergenic 40.0%
GTTGAAATTCCTGATGTAGC+GGG + chr7_4:659170-659189 None:intergenic 40.0%
GGTTGAAATTCCTGATGTAG+CGG + chr7_4:659171-659190 None:intergenic 40.0%
TTGAACCAGTGTTTGCTTCA+GGG + chr7_4:659193-659212 None:intergenic 40.0%
AAATTATTGGACCCAGAGGA+TGG + chr7_4:659233-659252 None:intergenic 40.0%
CGCTAAATCAAAAAAGGGTG+GGG + chr7_4:659376-659395 None:intergenic 40.0%
CACGCTAAATCAAAAAAGGG+TGG + chr7_4:659378-659397 None:intergenic 40.0%
GCATAACTGTAACTAGTGTG+TGG - chr7_4:659397-659416 Msa1134260:intron 40.0%
CTGTCACGAAATGTACCATA+TGG - chr7_4:659432-659451 Msa1134260:CDS 40.0%
!! CAGTCTTTTGAAGATCCGTT+TGG - chr7_4:659630-659649 Msa1134260:intron 40.0%
! GTTTGGTGATTCACCATTCA+AGG - chr7_4:659647-659666 Msa1134260:intron 40.0%
!! ACAGAAGTATCAGCCTTGAA+TGG + chr7_4:659663-659682 None:intergenic 40.0%
CGGCATTAAAACCATCTGAT+TGG + chr7_4:659734-659753 None:intergenic 40.0%
CGAATCTTGGGACAAAAACT+GGG + chr7_4:659847-659866 None:intergenic 40.0%
! CCAGTTTTTGTCCCAAGATT+CGG - chr7_4:659845-659864 Msa1134260:intron 40.0%
TGTGATGTCATCTCAGGTAA+TGG + chr7_4:659906-659925 None:intergenic 40.0%
! AACAGTTCAGCTCCTACTTT+TGG - chr7_4:659930-659949 Msa1134260:CDS 40.0%
TTGAAAAGGAAGGTGAAGGT+TGG + chr7_4:659956-659975 None:intergenic 40.0%
GAAGTTGAAAAGGAAGGTGA+AGG + chr7_4:659960-659979 None:intergenic 40.0%
CCAGATGAAGTTGAAAAGGA+AGG + chr7_4:659966-659985 None:intergenic 40.0%
! CCTTCCTTTTCAACTTCATC+TGG - chr7_4:659963-659982 Msa1134260:CDS 40.0%
TGGTCCAGATGAAGTTGAAA+AGG + chr7_4:659970-659989 None:intergenic 40.0%
! TGACCAGTTGGTTCAGAAAA+TGG + chr7_4:659990-660009 None:intergenic 40.0%
GGAAAATTGACCACTTGGAA+GGG + chr7_4:660063-660082 None:intergenic 40.0%
TGACCAGAATGAGAAGGAAA+GGG + chr7_4:660149-660168 None:intergenic 40.0%
TTGACCAGAATGAGAAGGAA+AGG + chr7_4:660150-660169 None:intergenic 40.0%
CAATCTACTGCACAAACAAG+CGG - chr7_4:660239-660258 Msa1134260:intron 40.0%
TGGAGTAAGAGATGTATCCA+GGG + chr7_4:660288-660307 None:intergenic 40.0%
!! GAATACATGTTTTGAGCTCC+TGG + chr7_4:660308-660327 None:intergenic 40.0%
! GGAAAGTTTGTGATTTGTGC+CGG + chr7_4:660440-660459 None:intergenic 40.0%
ATCACAAACTTTCCCCATCA+TGG - chr7_4:660446-660465 Msa1134260:intron 40.0%
AACTGTGATGCTTGATCAGT+TGG + chr7_4:660494-660513 None:intergenic 40.0%
TTCAACAACCAGAGCTTCTT+TGG - chr7_4:660512-660531 Msa1134260:CDS 40.0%
AGAGCTTCTTTGGACAACAA+GGG - chr7_4:660522-660541 Msa1134260:exon 40.0%
! ATAGCATACGGTGAAGCATT+GGG + chr7_4:660593-660612 None:intergenic 40.0%
AATAGCATACGGTGAAGCAT+TGG + chr7_4:660594-660613 None:intergenic 40.0%
!! TTCACCGTATGCTATTTCAG+CGG - chr7_4:660598-660617 Msa1134260:intron 40.0%
GATGTTACAGGTGTGTTAGT+GGG + chr7_4:660911-660930 None:intergenic 40.0%
TGATGTTACAGGTGTGTTAG+TGG + chr7_4:660912-660931 None:intergenic 40.0%
CCCATCATCGAATTTGGATT+AGG + chr7_4:661004-661023 None:intergenic 40.0%
!! AGTAGGCACTGGTATTGATA+TGG + chr7_4:661349-661368 None:intergenic 40.0%
TTCTGTAAAGTGACCTAGTG+TGG - chr7_4:661424-661443 Msa1134260:intron 40.0%
CGGGATAGAATAACCTTACT+TGG - chr7_4:661545-661564 Msa1134260:five_prime_UTR 40.0%
CAGATCCAAACGGAACGAAT+TGG + chr7_4:654042-654061 None:intergenic 45.0%
GTTCCGTTTGGATCTGAATC+AGG - chr7_4:654046-654065 Msa1134260:three_prime_UTR 45.0%
! AGATAGCAGTTTGGGCCTTT+TGG - chr7_4:654899-654918 Msa1134260:CDS 45.0%
ACCAGCTGCTACAATGAAGA+AGG - chr7_4:654940-654959 Msa1134260:CDS 45.0%
ACCTTCTTCATTGTAGCAGC+TGG + chr7_4:654944-654963 None:intergenic 45.0%
! AGTTCCTGGCATTGAACAGA+AGG - chr7_4:655169-655188 Msa1134260:CDS 45.0%
TGATTTCTATCCCCTCTACC+AGG - chr7_4:655331-655350 Msa1134260:CDS 45.0%
AGCATCAAGAACCTGGTAGA+GGG + chr7_4:655345-655364 None:intergenic 45.0%
TAGCATCAAGAACCTGGTAG+AGG + chr7_4:655346-655365 None:intergenic 45.0%
TGCTAGTAGCATCAAGAACC+TGG + chr7_4:655352-655371 None:intergenic 45.0%
GCTACTAGCAATGAACCATG+GGG - chr7_4:655362-655381 Msa1134260:CDS 45.0%
CATCTGGTATTCATGACTGC+AGG + chr7_4:655502-655521 None:intergenic 45.0%
GACAGTACTTGAGTACTTGG+TGG - chr7_4:655721-655740 Msa1134260:CDS 45.0%
ATCGAAACTAGGTACCTGTG+TGG + chr7_4:655857-655876 None:intergenic 45.0%
GTCGGACAAAGTCTGTTCAT+AGG + chr7_4:655928-655947 None:intergenic 45.0%
GATTCCAGTGGAAGAGATCA+AGG - chr7_4:655960-655979 Msa1134260:intron 45.0%
GTTTCCTTGATCTCTTCCAC+TGG + chr7_4:655967-655986 None:intergenic 45.0%
AATCGTAGAGGTTAGGCAGA+AGG - chr7_4:656040-656059 Msa1134260:intron 45.0%
GCAGAAGGCTGCTGTTAATA+GGG - chr7_4:656055-656074 Msa1134260:intron 45.0%
! GTTACAAGAGTTGGGTGTTG+TGG + chr7_4:656310-656329 None:intergenic 45.0%
CAACACCCAACTCTTGTAAC+TGG - chr7_4:656310-656329 Msa1134260:CDS 45.0%
GGAAAAATTGTGGGTCTCGT+TGG - chr7_4:656344-656363 Msa1134260:CDS 45.0%
!! CACTCAAGCATTGGAAGCTA+TGG - chr7_4:656498-656517 Msa1134260:intron 45.0%
AAGAAGATCGTTATGCGAGC+AGG - chr7_4:656532-656551 Msa1134260:intron 45.0%
AGAAGATCGTTATGCGAGCA+GGG - chr7_4:656533-656552 Msa1134260:intron 45.0%
AGCAGGGAGGAAGATAGAAA+TGG - chr7_4:656549-656568 Msa1134260:intron 45.0%
!! TGGGCTCTAGAGATGATGAT+CGG - chr7_4:656598-656617 Msa1134260:intron 45.0%
AATCGCGATGGAGATCGTTA+TGG - chr7_4:656624-656643 Msa1134260:intron 45.0%
GATCGTGATTTCGATGACGA+TGG - chr7_4:656759-656778 Msa1134260:CDS 45.0%
CAACTGGGCAGTACATTCTT+TGG + chr7_4:657374-657393 None:intergenic 45.0%
TTCCAGTGGTTTACTCAAGG+GGG + chr7_4:657483-657502 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_4:657629-657648 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_4:657630-657649 None:intergenic 45.0%
AAGACCAATCACTGGAAGCA+AGG - chr7_4:658250-658269 Msa1134260:intron 45.0%
TACAAACGAGCAGACTTCAG+CGG - chr7_4:658424-658443 Msa1134260:intron 45.0%
TGCTCCTCCTAGTTATGAAG+AGG - chr7_4:658470-658489 Msa1134260:intron 45.0%
ACAGCCTCTTCATAACTAGG+AGG + chr7_4:658477-658496 None:intergenic 45.0%
CCAACAGCCTCTTCATAACT+AGG + chr7_4:658480-658499 None:intergenic 45.0%
CCTAGTTATGAAGAGGCTGT+TGG - chr7_4:658477-658496 Msa1134260:intron 45.0%
GTTCATACCTTTCAGGCACA+GGG + chr7_4:658515-658534 None:intergenic 45.0%
AGTTCATACCTTTCAGGCAC+AGG + chr7_4:658516-658535 None:intergenic 45.0%
!!! GAGGTTCGGTTTTGAACAAG+TGG + chr7_4:658558-658577 None:intergenic 45.0%
ACTAGCAGCAACAGATGTAC+TGG + chr7_4:658736-658755 None:intergenic 45.0%
GATGATTTCTTTGACCCACG+TGG - chr7_4:658789-658808 Msa1134260:CDS 45.0%
TGAACCAGTGTTTGCTTCAG+GGG + chr7_4:659192-659211 None:intergenic 45.0%
GTTGAACCAGTGTTTGCTTC+AGG + chr7_4:659194-659213 None:intergenic 45.0%
ATCAAAAAAGGGTGGGGACA+AGG + chr7_4:659370-659389 None:intergenic 45.0%
AACTGTAACTAGTGTGTGGG+TGG - chr7_4:659401-659420 Msa1134260:intron 45.0%
ACTGTAACTAGTGTGTGGGT+GGG - chr7_4:659402-659421 Msa1134260:intron 45.0%
! ACTCAGTTTGTTCAACGACC+AGG + chr7_4:659470-659489 None:intergenic 45.0%
GGTCGTTGAACAAACTGAGT+AGG - chr7_4:659470-659489 Msa1134260:CDS 45.0%
ACTGAACCATCCCAATCAGA+TGG - chr7_4:659720-659739 Msa1134260:CDS 45.0%
! GAGAAAGGTTGAGTGTCACT+GGG + chr7_4:659816-659835 None:intergenic 45.0%
AGAGAAAGGTTGAGTGTCAC+TGG + chr7_4:659817-659836 None:intergenic 45.0%
AACTGGGAGTTAGCAGAGAA+AGG + chr7_4:659831-659850 None:intergenic 45.0%
CCGAATCTTGGGACAAAAAC+TGG + chr7_4:659848-659867 None:intergenic 45.0%
TTCTGCTGTGATGTCATCTC+AGG + chr7_4:659912-659931 None:intergenic 45.0%
! GGACCATTTTCTGAACCAAC+TGG - chr7_4:659984-660003 Msa1134260:intron 45.0%
! TGAGGAGTAAGTTGACCAGT+TGG + chr7_4:660002-660021 None:intergenic 45.0%
GGTCAACTTACTCCTCATCA+AGG - chr7_4:660005-660024 Msa1134260:intron 45.0%
!! AAGGGTTTGTGCAGGTTGAT+TGG + chr7_4:660045-660064 None:intergenic 45.0%
GGGAAAATTGACCACTTGGA+AGG + chr7_4:660064-660083 None:intergenic 45.0%
GAACTAGAAGCTGAAAAGCC+TGG + chr7_4:660089-660108 None:intergenic 45.0%
CAACCCTTTCCTTCTCATTC+TGG - chr7_4:660143-660162 Msa1134260:intron 45.0%
CAAAAGGTGGCTGCATAGAA+TGG + chr7_4:660205-660224 None:intergenic 45.0%
CAAACAAGCGGTCATACCTA+CGG - chr7_4:660251-660270 Msa1134260:intron 45.0%
CTGGAGTAAGAGATGTATCC+AGG + chr7_4:660289-660308 None:intergenic 45.0%
CTGGATACATCTCTTACTCC+AGG - chr7_4:660287-660306 Msa1134260:intron 45.0%
TTGTGAAGGAAAGCCTGTTG+AGG + chr7_4:660390-660409 None:intergenic 45.0%
ACAAACTTTCCCCATCATGG+AGG - chr7_4:660449-660468 Msa1134260:intron 45.0%
AGCAGTAGATCCTCCATGAT+GGG + chr7_4:660462-660481 None:intergenic 45.0%
AAGCAGTAGATCCTCCATGA+TGG + chr7_4:660463-660482 None:intergenic 45.0%
GATGCTTGATCAGTTGGAGA+GGG + chr7_4:660488-660507 None:intergenic 45.0%
TGATGCTTGATCAGTTGGAG+AGG + chr7_4:660489-660508 None:intergenic 45.0%
! CTTGTTGTCCAAAGAAGCTC+TGG + chr7_4:660523-660542 None:intergenic 45.0%
CAGAGCTTCTTTGGACAACA+AGG - chr7_4:660521-660540 Msa1134260:CDS 45.0%
TTTGGGCAGACACATTAAGC+AGG - chr7_4:660678-660697 Msa1134260:intron 45.0%
TTGGGCAGACACATTAAGCA+GGG - chr7_4:660679-660698 Msa1134260:intron 45.0%
ATGGGTAAAGCTATGGGATC+AGG - chr7_4:660941-660960 Msa1134260:intron 45.0%
AAAGCTATGGGATCAGGTTC+AGG - chr7_4:660947-660966 Msa1134260:intron 45.0%
CCAGAACCCATCATCGAATT+TGG + chr7_4:661010-661029 None:intergenic 45.0%
!! CCAAATTCGATGATGGGTTC+TGG - chr7_4:661007-661026 Msa1134260:intron 45.0%
!! TTCGATGATGGGTTCTGGTA+TGG - chr7_4:661012-661031 Msa1134260:intron 45.0%
!! TCGATGATGGGTTCTGGTAT+GGG - chr7_4:661013-661032 Msa1134260:intron 45.0%
ACATCCATGGGTATGGGTAT+GGG - chr7_4:661100-661119 Msa1134260:intron 45.0%
TACCAGATGCAACCTCCTAA+TGG - chr7_4:661154-661173 Msa1134260:intron 45.0%
TTCCATTAGGAGGTTGCATC+TGG + chr7_4:661159-661178 None:intergenic 45.0%
GGTTATGCTCAACAGCCATA+TGG - chr7_4:661235-661254 Msa1134260:intron 45.0%
TATGCTCAACAGCCATATGG+TGG - chr7_4:661238-661257 Msa1134260:intron 45.0%
TCTCATCGGTATCCACCATA+TGG + chr7_4:661253-661272 None:intergenic 45.0%
! TGTTGACTACTAGTAGGCAC+TGG + chr7_4:661360-661379 None:intergenic 45.0%
!!! TTTTGGGGTCACCCTTCTTT+AGG - chr7_4:661490-661509 Msa1134260:five_prime_UTR 45.0%
! TTTGGGGTCACCCTTCTTTA+GGG - chr7_4:661491-661510 Msa1134260:five_prime_UTR 45.0%
! GCTCAAAGCACCCTAAAGAA+GGG + chr7_4:661504-661523 None:intergenic 45.0%
! TGCTCAAAGCACCCTAAAGA+AGG + chr7_4:661505-661524 None:intergenic 45.0%
AGGTTATTCTATCCCGTCAC+TGG + chr7_4:661541-661560 None:intergenic 45.0%
!! AATAATTAATTATCAATTAA+TGG + chr7_4:655001-655020 None:intergenic 5.0%
AACGGAACGAATTGGTGCGT+CGG + chr7_4:654034-654053 None:intergenic 50.0%
ACGCACCAATTCGTTCCGTT+TGG - chr7_4:654034-654053 Msa1134260:three_prime_UTR 50.0%
! CAAGCACCGTTCTCGATTGA+TGG + chr7_4:654778-654797 None:intergenic 50.0%
GCATCAAGAACCTGGTAGAG+GGG + chr7_4:655344-655363 None:intergenic 50.0%
AATGAACCATGGGGTCCTCA+TGG - chr7_4:655371-655390 Msa1134260:CDS 50.0%
TCTGCAAGCAGTGTTCCATG+AGG + chr7_4:655389-655408 None:intergenic 50.0%
ACTGCTTGCAGACATTGCTC+AGG - chr7_4:655397-655416 Msa1134260:CDS 50.0%
ACGACACTGGCAAGAATTGG+CGG - chr7_4:655550-655569 Msa1134260:CDS 50.0%
GAATTGGCGGCATGTCTACA+AGG - chr7_4:655563-655582 Msa1134260:CDS 50.0%
! CTTGAGTACTTGGTGGCTCA+TGG - chr7_4:655728-655747 Msa1134260:CDS 50.0%
GGCAGAAGGCTGCTGTTAAT+AGG - chr7_4:656054-656073 Msa1134260:intron 50.0%
CACCCAACTCTTGTAACTGG+TGG - chr7_4:656313-656332 Msa1134260:CDS 50.0%
CCAGGTCTATACATTCCACC+TGG + chr7_4:656474-656493 None:intergenic 50.0%
CCAGGTGGAATGTATAGACC+TGG - chr7_4:656471-656490 Msa1134260:intron 50.0%
CCAATGCTTGAGTGTGAACC+AGG + chr7_4:656492-656511 None:intergenic 50.0%
CCTGGTTCACACTCAAGCAT+TGG - chr7_4:656489-656508 Msa1134260:intron 50.0%
GATGATCGGTACAATCGCGA+TGG - chr7_4:656612-656631 Msa1134260:intron 50.0%
GCTTGGCTAGGAAGATCACA+AGG - chr7_4:656876-656895 Msa1134260:intron 50.0%
! GTCTGCACTGCACTGAGTTT+TGG - chr7_4:656913-656932 Msa1134260:intron 50.0%
GTAAGGATGAGGCTAGGATC+CGG + chr7_4:657112-657131 None:intergenic 50.0%
TCCAGTGGTTTACTCAAGGG+GGG + chr7_4:657482-657501 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_4:657625-657644 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_4:657631-657650 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_4:657628-657647 Msa1134260:intron 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG - chr7_4:657635-657654 Msa1134260:intron 50.0%
ATCCAGTAGGAGCAGAGGTT+AGG + chr7_4:658671-658690 None:intergenic 50.0%
AGAAGATCCAGTAGGAGCAG+AGG + chr7_4:658676-658695 None:intergenic 50.0%
GCAGCAGCAGTTACTTCAGT+TGG + chr7_4:658714-658733 None:intergenic 50.0%
! TCCTTTGGGGAGTTGGATCT+TGG - chr7_4:658972-658991 Msa1134260:CDS 50.0%
GGATCTTGGCACTTGGTTGT+TGG - chr7_4:658986-659005 Msa1134260:CDS 50.0%
TTAGAAGTGGTTGGAGCAGC+TGG + chr7_4:659080-659099 None:intergenic 50.0%
TCAACCCCTGAAGCAAACAC+TGG - chr7_4:659185-659204 Msa1134260:intron 50.0%
! TCTTTTGCAGCACCATCCTC+TGG - chr7_4:659218-659237 Msa1134260:intron 50.0%
! CTTTTGCAGCACCATCCTCT+GGG - chr7_4:659219-659238 Msa1134260:intron 50.0%
! TGAGGTGCATGGTGTTGAGA+TGG + chr7_4:659696-659715 None:intergenic 50.0%
! GTTCAGTAGTCTGAGGTGCA+TGG + chr7_4:659707-659726 None:intergenic 50.0%
TGGGATGGTTCAGTAGTCTG+AGG + chr7_4:659714-659733 None:intergenic 50.0%
! ATCTCAGGTAATGGTGCAGG+AGG + chr7_4:659897-659916 None:intergenic 50.0%
! GTCATCTCAGGTAATGGTGC+AGG + chr7_4:659900-659919 None:intergenic 50.0%
! GGTGAAGGTTGGCCAAAAGT+AGG + chr7_4:659945-659964 None:intergenic 50.0%
GCAGCTGAGAAACCTTGATG+AGG + chr7_4:660020-660039 None:intergenic 50.0%
GGCTGGGAAAATTGACCACT+TGG + chr7_4:660068-660087 None:intergenic 50.0%
! AGTGGTCAATTTTCCCAGCC+AGG - chr7_4:660068-660087 Msa1134260:CDS 50.0%
AGAAGCTGAAAAGCCTGGCT+GGG + chr7_4:660084-660103 None:intergenic 50.0%
TAGAAGCTGAAAAGCCTGGC+TGG + chr7_4:660085-660104 None:intergenic 50.0%
!! CTGTGCATATGGACTGGTAG+AGG + chr7_4:660123-660142 None:intergenic 50.0%
GGAAAGGGTTGCTGTGCATA+TGG + chr7_4:660134-660153 None:intergenic 50.0%
! CCAGGTTGACCAGAATGAGA+AGG + chr7_4:660155-660174 None:intergenic 50.0%
CCTTCTCATTCTGGTCAACC+TGG - chr7_4:660152-660171 Msa1134260:intron 50.0%
! CAGCCACCTTTTGCTTCTCA+AGG - chr7_4:660212-660231 Msa1134260:intron 50.0%
! CCACCTTTTGCTTCTCAAGG+CGG - chr7_4:660215-660234 Msa1134260:intron 50.0%
TGACCGCCTTGAGAAGCAAA+AGG + chr7_4:660221-660240 None:intergenic 50.0%
AGTGGGAACTACTTGCCACA+GGG - chr7_4:660362-660381 Msa1134260:intron 50.0%
GCTTGGGGAGTCATTTGTGA+AGG + chr7_4:660404-660423 None:intergenic 50.0%
!! ATTTGTGCCGGTTGTGCTGT+TGG + chr7_4:660428-660447 None:intergenic 50.0%
GCAGTAGATCCTCCATGATG+GGG + chr7_4:660461-660480 None:intergenic 50.0%
ATTGGGAGCAGGCACTTGAT+GGG + chr7_4:660576-660595 None:intergenic 50.0%
!! GGTGCCGCTGAAATAGCATA+CGG + chr7_4:660605-660624 None:intergenic 50.0%
TGGGCAGACACATTAAGCAG+GGG - chr7_4:660680-660699 Msa1134260:intron 50.0%
AGACACATTAAGCAGGGGAC+TGG - chr7_4:660685-660704 Msa1134260:intron 50.0%
ATGGGATCAGGTTCAGGCAT+AGG - chr7_4:660953-660972 Msa1134260:intron 50.0%
! ATGGGTTCTGGTATGGGCAT+GGG - chr7_4:661019-661038 Msa1134260:intron 50.0%
TTCTGGTATGGGCATGGGTA+TGG - chr7_4:661024-661043 Msa1134260:intron 50.0%
TCTGGTATGGGCATGGGTAT+GGG - chr7_4:661025-661044 Msa1134260:intron 50.0%
TATGGGCATGGGTATGGGAA+TGG - chr7_4:661030-661049 Msa1134260:intron 50.0%
ATGGGCATGGGTATGGGAAT+GGG - chr7_4:661031-661050 Msa1134260:intron 50.0%
GGTATGGGTATGGGAGGTTA+CGG - chr7_4:661067-661086 Msa1134260:intron 50.0%
AGGCATGACATCCATGGGTA+TGG - chr7_4:661093-661112 Msa1134260:intron 50.0%
GGCATGACATCCATGGGTAT+GGG - chr7_4:661094-661113 Msa1134260:intron 50.0%
GACATCCATGGGTATGGGTA+TGG - chr7_4:661099-661118 Msa1134260:intron 50.0%
GGTATGGGTATGGGTGGTAT+GGG - chr7_4:661109-661128 Msa1134260:intron 50.0%
GTATGGGTATGGGTGGTATG+GGG - chr7_4:661110-661129 Msa1134260:intron 50.0%
TATGGGTATGGGTGGTATGG+GGG - chr7_4:661111-661130 Msa1134260:intron 50.0%
!! GAACCAGGAGGCATTCCATT+AGG + chr7_4:661172-661191 None:intergenic 50.0%
TTACCTGGCATGTTGGAACC+AGG + chr7_4:661187-661206 None:intergenic 50.0%
AATAACATGATGCGTCCCGG+TGG - chr7_4:661214-661233 Msa1134260:intron 50.0%
TGGCTGTTGAGCATAACCAC+CGG + chr7_4:661233-661252 None:intergenic 50.0%
TCAGCGTTGTGTACCAGTGA+CGG - chr7_4:661525-661544 Msa1134260:five_prime_UTR 50.0%
!! CAGTTTGGGCCTTTTGGTGC+TGG - chr7_4:654905-654924 Msa1134260:CDS 55.0%
AGTGTTCCATGAGGACCCCA+TGG + chr7_4:655380-655399 None:intergenic 55.0%
AGATCGTTATGCGAGCAGGG+AGG - chr7_4:656536-656555 Msa1134260:intron 55.0%
GAGGAACGTTACGGTAGGGA+CGG - chr7_4:656657-656676 Msa1134260:intron 55.0%
ACGATGGCCAACACTCGTCT+CGG - chr7_4:656775-656794 Msa1134260:CDS 55.0%
GGCTTTACCGAGACGAGTGT+TGG + chr7_4:656785-656804 None:intergenic 55.0%
TTACCTCCGCCTCCACAGAT+AGG - chr7_4:657456-657475 Msa1134260:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_4:657623-657642 Msa1134260:intron 55.0%
TCGGCAGAATCTGCTCCAAG+AGG - chr7_4:658615-658634 Msa1134260:intron 55.0%
GTAGGAGCAGAGGTTAGGCT+AGG + chr7_4:658666-658685 None:intergenic 55.0%
AGCCTAACCTCTGCTCCTAC+TGG - chr7_4:658666-658685 Msa1134260:intron 55.0%
GACCTGATGTAGGACCACGT+GGG + chr7_4:658806-658825 None:intergenic 55.0%
AGACCTGATGTAGGACCACG+TGG + chr7_4:658807-658826 None:intergenic 55.0%
GCCAAGATCCAACTCCCCAA+AGG + chr7_4:658976-658995 None:intergenic 55.0%
GGGAGTTGGATCTTGGCACT+TGG - chr7_4:658979-658998 Msa1134260:CDS 55.0%
CTGGGAGCAGATGCAGAGTA+TGG + chr7_4:659798-659817 None:intergenic 55.0%
CCACTTGGAAGGGTTTGTGC+AGG + chr7_4:660053-660072 None:intergenic 55.0%
CCTGCACAAACCCTTCCAAG+TGG - chr7_4:660050-660069 Msa1134260:intron 55.0%
GGGTTGCTGTGCATATGGAC+TGG + chr7_4:660129-660148 None:intergenic 55.0%
CCAGTAGATGACGAGAACCC+AGG + chr7_4:660182-660201 None:intergenic 55.0%
CCTGGGTTCTCGTCATCTAC+TGG - chr7_4:660179-660198 Msa1134260:intron 55.0%
CCGCCTTGAGAAGCAAAAGG+TGG + chr7_4:660218-660237 None:intergenic 55.0%
ACAAGCGGTCATACCTACGG+TGG - chr7_4:660254-660273 Msa1134260:intron 55.0%
! CAGGGAGTACAATCCACCGT+AGG + chr7_4:660270-660289 None:intergenic 55.0%
!! CTACGGTGGATTGTACTCCC+TGG - chr7_4:660268-660287 Msa1134260:intron 55.0%
CAGTGGGAACTACTTGCCAC+AGG - chr7_4:660361-660380 Msa1134260:intron 55.0%
TTGCCACAGGGATCCTCAAC+AGG - chr7_4:660374-660393 Msa1134260:intron 55.0%
AAGCCTGTTGAGGATCCCTG+TGG + chr7_4:660380-660399 None:intergenic 55.0%
! GGTTGTGCTGTTGGAGCTTG+GGG + chr7_4:660419-660438 None:intergenic 55.0%
! CGGTTGTGCTGTTGGAGCTT+GGG + chr7_4:660420-660439 None:intergenic 55.0%
CCAAGCTCCAACAGCACAAC+CGG - chr7_4:660418-660437 Msa1134260:intron 55.0%
CATTGGGAGCAGGCACTTGA+TGG + chr7_4:660577-660596 None:intergenic 55.0%
!! TACGGTGAAGCATTGGGAGC+AGG + chr7_4:660587-660606 None:intergenic 55.0%
! GATGGGTTCTGGTATGGGCA+TGG - chr7_4:661018-661037 Msa1134260:intron 55.0%
ATGGGAATGGGCAATGCTCC+CGG - chr7_4:661043-661062 Msa1134260:intron 55.0%
ACCTCCCATACCCATACCAC+CGG + chr7_4:661065-661084 None:intergenic 55.0%
ATGGGTATGGGAGGTTACGG+AGG - chr7_4:661070-661089 Msa1134260:intron 55.0%
! GGAGGAGGCATGACATCCAT+GGG - chr7_4:661088-661107 Msa1134260:intron 55.0%
TCCATGGGTATGGGTATGGG+TGG - chr7_4:661103-661122 Msa1134260:intron 55.0%
ACCACCCATACCCATACCCA+TGG + chr7_4:661107-661126 None:intergenic 55.0%
GGGTATGGGTATGGGTGGTA+TGG - chr7_4:661108-661127 Msa1134260:intron 55.0%
ATGGGTATGGGTGGTATGGG+GGG - chr7_4:661112-661131 Msa1134260:intron 55.0%
!! CCAGGAGGCATTCCATTAGG+AGG + chr7_4:661169-661188 None:intergenic 55.0%
CCTCCTAATGGAATGCCTCC+TGG - chr7_4:661166-661185 Msa1134260:intron 55.0%
GGCTGTTGAGCATAACCACC+GGG + chr7_4:661232-661251 None:intergenic 55.0%
CAGCGTTGTGTACCAGTGAC+GGG - chr7_4:661526-661545 Msa1134260:five_prime_UTR 55.0%
CAGCACGAGCCAGCACCAAA+AGG + chr7_4:654917-654936 None:intergenic 60.0%
ACTCAAGGGGGGCCTATCTG+TGG + chr7_4:657471-657490 None:intergenic 60.0%
GCCCCCCTTGAGTAAACCAC+TGG - chr7_4:657478-657497 Msa1134260:intron 60.0%
TGGATGCCGACCCCACTTAG+TGG - chr7_4:657616-657635 Msa1134260:intron 60.0%
GGATGCCGACCCCACTTAGT+GGG - chr7_4:657617-657636 Msa1134260:intron 60.0%
CTCAGAGCCCTGTGCCTGAA+AGG - chr7_4:658505-658524 Msa1134260:intron 60.0%
GACCCACGTGGTCCTACATC+AGG - chr7_4:658801-658820 Msa1134260:CDS 60.0%
!! CCTGATGTAGCGGGCACAAG+AGG + chr7_4:659161-659180 None:intergenic 60.0%
CCTCTTGTGCCCGCTACATC+AGG - chr7_4:659158-659177 Msa1134260:intron 60.0%
TCTGGTCAACCTGGCATGCC+TGG - chr7_4:660161-660180 Msa1134260:intron 60.0%
CTGGTCAACCTGGCATGCCT+GGG - chr7_4:660162-660181 Msa1134260:intron 60.0%
! CCGGTTGTGCTGTTGGAGCT+TGG + chr7_4:660421-660440 None:intergenic 60.0%
GGTTCAGGCATAGGTCGTGC+TGG - chr7_4:660962-660981 Msa1134260:intron 60.0%
GGCAATGCTCCCGGTGGTAT+GGG - chr7_4:661052-661071 Msa1134260:intron 60.0%
TGCTCCCGGTGGTATGGGTA+TGG - chr7_4:661057-661076 Msa1134260:intron 60.0%
GCTCCCGGTGGTATGGGTAT+GGG - chr7_4:661058-661077 Msa1134260:intron 60.0%
CCTCCCATACCCATACCACC+GGG + chr7_4:661064-661083 None:intergenic 60.0%
GGTATGGGAGGTTACGGAGG+AGG - chr7_4:661073-661092 Msa1134260:intron 60.0%
! CGGAGGAGGCATGACATCCA+TGG - chr7_4:661087-661106 Msa1134260:intron 60.0%
TGGGTATGGGTGGTATGGGG+GGG - chr7_4:661113-661132 Msa1134260:intron 60.0%
ATGGGTGGTATGGGGGGGAT+AGG - chr7_4:661118-661137 Msa1134260:intron 60.0%
TGGTATGGGGGGGATAGGCA+TGG - chr7_4:661123-661142 Msa1134260:intron 60.0%
GGTATGGGGGGGATAGGCAT+GGG - chr7_4:661124-661143 Msa1134260:intron 60.0%
GTATGGGGGGGATAGGCATG+GGG - chr7_4:661125-661144 Msa1134260:intron 60.0%
CCTGGCATGTTGGAACCAGG+AGG + chr7_4:661184-661203 None:intergenic 60.0%
CCTCCTGGTTCCAACATGCC+AGG - chr7_4:661181-661200 Msa1134260:intron 60.0%
CAAGGGGGGCCTATCTGTGG+AGG + chr7_4:657468-657487 None:intergenic 65.0%
GCATGAGGGGACGAGCCTCT+TGG + chr7_4:658633-658652 None:intergenic 65.0%
GACGAGAACCCAGGCATGCC+AGG + chr7_4:660173-660192 None:intergenic 65.0%
! GGCATAGGTCGTGCTGGTGC+TGG - chr7_4:660968-660987 Msa1134260:intron 65.0%
GGAATGGGCAATGCTCCCGG+TGG - chr7_4:661046-661065 Msa1134260:intron 65.0%
GGGCAATGCTCCCGGTGGTA+TGG - chr7_4:661051-661070 Msa1134260:intron 65.0%
CCCGGTGGTATGGGTATGGG+AGG - chr7_4:661061-661080 Msa1134260:intron 65.0%
GGGCCTATCTGTGGAGGCGG+AGG + chr7_4:657462-657481 None:intergenic 70.0%
GGGGGGCCTATCTGTGGAGG+CGG + chr7_4:657465-657484 None:intergenic 70.0%
GGGGGGATAGGCATGGGGCA+AGG - chr7_4:661130-661149 Msa1134260:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 653841 661652 653841 ID=Msa1134260;Name=Msa1134260
chr7_4 mRNA 653841 661652 653841 ID=Msa1134260-mRNA-1;Parent=Msa1134260;Name=Msa1134260-mRNA-1;_AED=0.06;_eAED=0.06;_QI=279|1|1|1|0.92|0.85|14|382|960
chr7_4 exon 653841 654659 653841 ID=Msa1134260-mRNA-1:exon:246;Parent=Msa1134260-mRNA-1
chr7_4 exon 654765 655860 654765 ID=Msa1134260-mRNA-1:exon:245;Parent=Msa1134260-mRNA-1
chr7_4 exon 656234 656412 656234 ID=Msa1134260-mRNA-1:exon:244;Parent=Msa1134260-mRNA-1
chr7_4 exon 656671 656891 656671 ID=Msa1134260-mRNA-1:exon:243;Parent=Msa1134260-mRNA-1
chr7_4 exon 656967 657056 656967 ID=Msa1134260-mRNA-1:exon:242;Parent=Msa1134260-mRNA-1
chr7_4 exon 657222 657263 657222 ID=Msa1134260-mRNA-1:exon:241;Parent=Msa1134260-mRNA-1
chr7_4 exon 658697 659038 658697 ID=Msa1134260-mRNA-1:exon:240;Parent=Msa1134260-mRNA-1
chr7_4 exon 659412 659557 659412 ID=Msa1134260-mRNA-1:exon:239;Parent=Msa1134260-mRNA-1
chr7_4 exon 659694 659777 659694 ID=Msa1134260-mRNA-1:exon:238;Parent=Msa1134260-mRNA-1
chr7_4 exon 659909 659987 659909 ID=Msa1134260-mRNA-1:exon:237;Parent=Msa1134260-mRNA-1
chr7_4 exon 660061 660140 660061 ID=Msa1134260-mRNA-1:exon:236;Parent=Msa1134260-mRNA-1
chr7_4 exon 660303 660354 660303 ID=Msa1134260-mRNA-1:exon:235;Parent=Msa1134260-mRNA-1
chr7_4 exon 660506 660592 660506 ID=Msa1134260-mRNA-1:exon:234;Parent=Msa1134260-mRNA-1
chr7_4 exon 661426 661652 661426 ID=Msa1134260-mRNA-1:exon:233;Parent=Msa1134260-mRNA-1
chr7_4 five_prime_UTR 661426 661652 661426 ID=Msa1134260-mRNA-1:five_prime_utr;Parent=Msa1134260-mRNA-1
chr7_4 five_prime_UTR 660541 660592 660541 ID=Msa1134260-mRNA-1:five_prime_utr;Parent=Msa1134260-mRNA-1
chr7_4 CDS 660506 660540 660506 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 660303 660354 660303 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 660061 660140 660061 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 659909 659987 659909 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 659694 659777 659694 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 659412 659557 659412 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 658697 659038 658697 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 657222 657263 657222 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 656967 657056 656967 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 656671 656891 656671 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 656234 656412 656234 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 654765 655860 654765 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 CDS 654223 654659 654223 ID=Msa1134260-mRNA-1:cds;Parent=Msa1134260-mRNA-1
chr7_4 three_prime_UTR 653841 654222 653841 ID=Msa1134260-mRNA-1:three_prime_utr;Parent=Msa1134260-mRNA-1
Gene Sequence

>Msa1134260

ATGAAGAAGGTTTTTGGTCAAACTGTTAGGGACCTTAAAAGAGAAGTGAACAAGAAAGTGCTCAAAGTTCCTGGCATTGAACAGAAGGTTCTTGATGCTACTAGCAATGAACCATGGGGTCCTCATGGAACACTGCTTGCAGACATTGCTCAGGCAACTAGAAACCCTCATGAATACCAGATGATCATGTCAGTAGTCTGGAAACGAATTAACGACACTGGCAAGAATTGGCGGCATGTCTACAAGGCTTTGACAGTACTTGAGTACTTGGTGGCTCATGGTTCTGAGAGAGTCATAGATGAGATCAAAGAACATTCTTATCAAATATCGACTTTGTCCGACTTTCAATATATTGATTCCAGTGGAAGAGATCAAGGAAACAATGTTAGGAAAAAATCTCAGAATCTCGTTGTCCTTGTGAATGATAAAGAAAGAATCGTAGAGGTTAGGCAGAAGGCTGCTGTTAATAGGGAAAAGTTTCGCAATAATACACCAGGTGGAATGTATAGACCTGGTTCACACTCAAGCATTGGAAGCTATGGTGATCGATATGAAGAAGATCGTTATGCGAGCAGGGAGGAAGATAGAAATGGCTATGGTTATGGAAGAGAAAGAGAAATGGGCTCTAGAGATGATGATCGGTACAATCGCGATGGAGATCGTTATGGTAGAGATTATGAGGAACGTTACGGTAGGGACGGTTACAGAGATGATGATAGGGGAAGAAGTCGAAGTGTTGACTACAATTATGATGATACAAGGAGCAGGAATTCTGATAGAGATCGTGATTTCGATGACGATGGCCAACACTCGTCTCGAGGTAGCAATGCTAAAGTTGAAGACCAATCACTGGAAGCAAGACTTCAGCGGAAACTTTCTGAGCAAAATTCGGGTGCTCCTCCTAGTTATGAAGAGGCTGTTGGTGAAGCTCAGAGCCCTGTGCCTGAAAGGGATGTTGAAACTTCGGCAGAATCTGCTCCAAGAGGCTCGTCCCCTCATGCAAGTGATAATCCTAGCCTAACCTCTGCTCCTACTGGATCTTCTCCTGTAAACAATAATCCAACTGAAGTAACTGCTGCTGCCAGTACATCTGTTGCTGCTAGTACTGCTGTTTCTACTCAGGAAACTGAGCCCACTGATGATTTCTTTGACCCACGTGGTCCTACATCAGCTGCTCCAACCACTTCTAATTTTGGCGAAATAGATTTGCTCGGTTCTTTATCAGACTCATTCTCTTCAAATGCTCTGCCTCTTGTGCCCGCTACATCAGGAATTTCAACCCCTGAAGCAAACACTGGTTCAACAGCTTCTTTTGCAGCACCATCCTCTGGGTCCAATAATTTCAATCAGTCTTTTGAAGATCCGTTTGGTGATTCACCATTCAAGGCTGATACTTCTGTTGAAACTGCTCCATCTCAACACCATGCACCTCAGACTACTGAACCATCCCAATCAGATGGTTTTAATGCCGACATGTCTAATTTTGGGTTTGGGGACTCATTTTCTATTGTACCATACTCTGCATCTGCTCCCAGTGACACTCAACCTTTCTCTGCTAACTCCCAGTTTTTGTCCCAAGATTCGGAAACTGATATTCTAGCTGACATTCTTCCTCCTGCACCATTACCTGAGATGACATCACAGCAGAACAGTTCAGCTCCTACTTTTGGCCAACCTTCACCTTCCTTTTCAACTTCATCTGGACCATTTTCTGAACCAACTGGTCAACTTACTCCTCATCAAGGTTTCTCAGCTGCAACCAATCAACCTGCACAAACCCTTCCAAGTGGTCAATTTTCCCAGCCAGGCTTTTCAGCTTCTAGTTCATCTTTTTCAGCCTCTACCAGTCCATATGCACAGCAACCCTTTCCTTCTCATTCTGGTCAACCTGGCATGCCTGGGTTCTCGTCATCTACTGGCCATTCTATGCAGCCACCTTTTGCTTCTCAAGGCGGTCAATCTACTGCACAAACAAGCGGTCATACCTACGGTGGATTGTACTCCCTGGATACATCTCTTACTCCAGGAGCTCAAAACATGTATTCTCAATCACAAAATGGATATAATGGATCTATGAACAGTGGGAACTACTTGCCACAGGGATCCTCAACAGGCTTTCCTTCACAAATGACTCCCCAAGCTCCAACAGCACAACCGGCACAAATCACAAACTTTCCCCATCATGGAGGATCTACTGCTTCTCCCTCTCCAACTGATCAAGCATCACAGTTCAACAACCAGAGCTTCTTTGGACAACAAGGGAATGCAGCTCCCTTTAGCTCATCATATACCCATCAAGTGCCTGCTCCCAATGCTTCACCGTATGCTATTTCAGCGGCACCAAATTCTTTAGTTTCTCAACCATCCAAAGATAAGTTTGAAACAAAATCAACAGTTTGGGCAGACACATTAAGCAGGGGACTGGTTAATTTAAACATATCTGGACCTAAAACTAATCCGTTAGCAGATATTGGCATTGACTTCGAATCCATTAATAGGAAGGAAAAGAGAATGGAGAAGCCCACTAACACACCTGTAACATCAACTGTAAATATGGGTAAAGCTATGGGATCAGGTTCAGGCATAGGTCGTGCTGGTGCTGGTGCTCTTAGACCTAATCCAAATTCGATGATGGGTTCTGGTATGGGCATGGGTATGGGAATGGGCAATGCTCCCGGTGGTATGGGTATGGGAGGTTACGGAGGAGGCATGACATCCATGGGTATGGGTATGGGTGGTATGGGGGGGATAGGCATGGGGCAAGGATACCAGATGCAACCTCCTAATGGAATGCCTCCTGGTTCCAACATGCCAGGTAACTATAATAATAACATGATGCGTCCCGGTGGTTATGCTCAACAGCCATATGGTGGATACCGATGA
Protein sequence

>Msa1134260

MKKVFGQTVRDLKREVNKKVLKVPGIEQKVLDATSNEPWGPHGTLLADIAQATRNPHEYQMIMSVVWKRINDTGKNWRHVYKALTVLEYLVAHGSERVIDEIKEHSYQISTLSDFQYIDSSGRDQGNNVRKKSQNLVVLVNDKERIVEVRQKAAVNREKFRNNTPGGMYRPGSHSSIGSYGDRYEEDRYASREEDRNGYGYGREREMGSRDDDRYNRDGDRYGRDYEERYGRDGYRDDDRGRSRSVDYNYDDTRSRNSDRDRDFDDDGQHSSRGSNAKVEDQSLEARLQRKLSEQNSGAPPSYEEAVGEAQSPVPERDVETSAESAPRGSSPHASDNPSLTSAPTGSSPVNNNPTEVTAAASTSVAASTAVSTQETEPTDDFFDPRGPTSAAPTTSNFGEIDLLGSLSDSFSSNALPLVPATSGISTPEANTGSTASFAAPSSGSNNFNQSFEDPFGDSPFKADTSVETAPSQHHAPQTTEPSQSDGFNADMSNFGFGDSFSIVPYSASAPSDTQPFSANSQFLSQDSETDILADILPPAPLPEMTSQQNSSAPTFGQPSPSFSTSSGPFSEPTGQLTPHQGFSAATNQPAQTLPSGQFSQPGFSASSSSFSASTSPYAQQPFPSHSGQPGMPGFSSSTGHSMQPPFASQGGQSTAQTSGHTYGGLYSLDTSLTPGAQNMYSQSQNGYNGSMNSGNYLPQGSSTGFPSQMTPQAPTAQPAQITNFPHHGGSTASPSPTDQASQFNNQSFFGQQGNAAPFSSSYTHQVPAPNASPYAISAAPNSLVSQPSKDKFETKSTVWADTLSRGLVNLNISGPKTNPLADIGIDFESINRKEKRMEKPTNTPVTSTVNMGKAMGSGSGIGRAGAGALRPNPNSMMGSGMGMGMGMGNAPGGMGMGGYGGGMTSMGMGMGGMGGIGMGQGYQMQPPNGMPPGSNMPGNYNNNMMRPGGYAQQPYGGYR*