AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1134180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134180 MtrunA17_Chr7g0214661 95.464 970 22 4 1 949 1 969 0.0 1852
Msa1134180 MtrunA17_Chr1g0151921 49.309 217 83 4 3 192 5 221 1.05e-60 216
Msa1134180 MtrunA17_Chr1g0151921 46.835 79 37 1 777 855 447 520 8.89e-13 72.0
Msa1134180 MtrunA17_Chr7g0214591 72.143 140 16 2 29 157 17 144 1.30e-57 194
Msa1134180 MtrunA17_Chr7g0214601 94.030 67 3 1 196 262 1 66 2.78e-32 119
Msa1134180 MtrunA17_Chr7g0214581 78.049 82 10 1 534 615 1 74 1.49e-30 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134180 AT3G59290.1 44.424 1103 380 46 1 949 1 1024 0.0 640
Msa1134180 AT2G43160.3 47.403 924 295 36 1 864 1 793 0.0 613
Msa1134180 AT2G43160.2 47.403 924 295 36 1 864 1 793 0.0 613
Msa1134180 AT2G43160.5 47.403 924 295 36 1 864 1 793 0.0 613
Msa1134180 AT2G43160.1 47.403 924 295 36 1 864 1 793 0.0 613
Msa1134180 AT2G43160.4 52.067 653 199 24 1 591 1 601 8.09e-169 507
Msa1134180 AT5G11710.2 52.153 209 70 4 3 188 5 206 9.67e-60 214
Msa1134180 AT5G11710.1 52.153 209 70 4 3 188 5 206 9.67e-60 214
Msa1134180 AT5G11710.3 52.153 209 70 4 3 188 5 206 9.67e-60 214

Find 323 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGCCGACATGTCTAATTT+TGG 0.120905 7_4:-586534 Msa1134180:CDS
CCAGAACCCATCATCGAATT+TGG 0.156309 7_4:+585274 None:intergenic
TGTAACATCAACTGTAAATA+TGG 0.164903 7_4:-585359 Msa1134180:CDS
TATGAAAGTTCATACCTTTC+AGG 0.179618 7_4:+587762 None:intergenic
TCATACCTGATTGAAATTAT+TGG 0.180358 7_4:+587038 None:intergenic
GCTCCAACCACTTCTAATTT+TGG 0.186011 7_4:-587198 Msa1134180:CDS
TTCAACAACCAGAGCTTCTT+TGG 0.235438 7_4:-585769 Msa1134180:CDS
CAACCCTTTCCTTCTCATTC+TGG 0.236565 7_4:-586138 Msa1134180:CDS
GTTGAACCAGTGTTTGCTTC+AGG 0.238458 7_4:+587090 None:intergenic
TCTGGTCAACCTGGCATGCC+TGG 0.244292 7_4:-586120 Msa1134180:CDS
GGTTGAGAAACTAAAGAATT+TGG 0.251924 7_4:+585658 None:intergenic
TCAGTTGGATTATTGTTTAC+AGG 0.256532 7_4:+587585 None:intergenic
TTTGGGGTCACCCTTCTTTA+GGG 0.259399 7_4:-584791 Msa1134180:three_prime_UTR
GAATATCAGTTTCCGAATCT+TGG 0.282146 7_4:+586424 None:intergenic
TTGAACATTATTCTCATAGA+TGG 0.285330 7_4:-585003 Msa1134180:three_prime_UTR
AGATAGCAGTTTGGGCCTTT+TGG 0.285455 7_4:-591384 Msa1134180:five_prime_UTR
TTGACTTCGAATCCATTAAT+AGG 0.289742 7_4:-585417 Msa1134180:CDS
TTGAAACAAAATCAACAGTT+TGG 0.291455 7_4:-585621 Msa1134180:CDS
CAATCACAAAATGGATATAA+TGG 0.300667 7_4:-585952 Msa1134180:CDS
AACAGTTCAGCTCCTACTTT+TGG 0.301573 7_4:-586351 Msa1134180:CDS
TGACCAGTTGGTTCAGAAAA+TGG 0.305050 7_4:+586294 None:intergenic
GAAACTTTCTGAGCAAAATT+CGG 0.314709 7_4:-587835 Msa1134180:CDS
TTCTGGTATGGGCATGGGTA+TGG 0.316001 7_4:-585257 Msa1134180:CDS
CGGGATAGAATAACCTTACT+TGG 0.322909 7_4:-584737 Msa1134180:three_prime_UTR
ATATTTACAGTTGATGTTAC+AGG 0.336067 7_4:+585361 None:intergenic
CGGTTGTGCTGTTGGAGCTT+GGG 0.338820 7_4:+585864 None:intergenic
ATGTATTCTCAATCACAAAA+TGG 0.341820 7_4:-585961 Msa1134180:CDS
GGCAGAAGGCTGCTGTTAAT+AGG 0.348327 7_4:-590229 Msa1134180:CDS
TATGGGTATGGGTGGTATGG+GGG 0.348395 7_4:-585170 Msa1134180:CDS
GATAGAAATGGCTATGGTTA+TGG 0.348738 7_4:-589722 Msa1134180:CDS
ACTAATCCGTTAGCAGATAT+TGG 0.353426 7_4:-585442 Msa1134180:CDS
CTGGTTAATTTAAACATATC+TGG 0.356748 7_4:-585577 Msa1134180:CDS
GGGTATGGGTATGGGTGGTA+TGG 0.366177 7_4:-585173 Msa1134180:CDS
ATGGGTATGGGTGGTATGGG+GGG 0.366700 7_4:-585169 Msa1134180:CDS
TTTACCTTGCTTCCAGTGAT+TGG 0.366779 7_4:+588029 None:intergenic
CTTGTTGTCCAAAGAAGCTC+TGG 0.367203 7_4:+585761 None:intergenic
AAGGGTTTGTGCAGGTTGAT+TGG 0.371447 7_4:+586239 None:intergenic
AGCCTAACCTCTGCTCCTAC+TGG 0.373030 7_4:-587615 Msa1134180:CDS
AGAGAAAGGTTGAGTGTCAC+TGG 0.375866 7_4:+586467 None:intergenic
GTTCCGTTTGGATCTGAATC+AGG 0.378931 7_4:-592237 Msa1134180:intron
GGGCAATGCTCCCGGTGGTA+TGG 0.384752 7_4:-585230 Msa1134180:CDS
CCAAGCTCCAACAGCACAAC+CGG 0.387453 7_4:-585863 Msa1134180:CDS
TGCTCCCGGTGGTATGGGTA+TGG 0.390879 7_4:-585224 Msa1134180:CDS
CCTTCTCATTCTGGTCAACC+TGG 0.393221 7_4:-586129 Msa1134180:CDS
AAGAAAGTGCTCAAAGTTCC+TGG 0.395628 7_4:-591128 Msa1134180:CDS
AAACTTTCTGAGCAAAATTC+GGG 0.395642 7_4:-587834 Msa1134180:CDS
CCAAATTCGATGATGGGTTC+TGG 0.396774 7_4:-585274 Msa1134180:CDS
GACATCCATGGGTATGGGTA+TGG 0.397976 7_4:-585182 Msa1134180:CDS
CATTGGGAGCAGGCACTTGA+TGG 0.399820 7_4:+585707 None:intergenic
TCTGGTATGGGCATGGGTAT+GGG 0.400275 7_4:-585256 Msa1134180:CDS
TTCCATTAGGAGGTTGCATC+TGG 0.401445 7_4:+585125 None:intergenic
GAACCAGGAGGCATTCCATT+AGG 0.401518 7_4:+585112 None:intergenic
CCGGTTGTGCTGTTGGAGCT+TGG 0.402371 7_4:+585863 None:intergenic
TTAACGACACTGGCAAGAAT+TGG 0.403604 7_4:-590736 Msa1134180:CDS
GCAGAAGGCTGCTGTTAATA+GGG 0.404364 7_4:-590228 Msa1134180:CDS
GGTATGGGTATGGGTGGTAT+GGG 0.405295 7_4:-585172 Msa1134180:CDS
AAAGCTATGGGATCAGGTTC+AGG 0.405979 7_4:-585334 Msa1134180:CDS
TTGAACCAGTGTTTGCTTCA+GGG 0.407111 7_4:+587091 None:intergenic
TTCGATGATGGGTTCTGGTA+TGG 0.407415 7_4:-585269 Msa1134180:CDS
CCCATCATCGAATTTGGATT+AGG 0.408567 7_4:+585280 None:intergenic
AGAACATTCTTATCAAATAT+CGG 0.410125 7_4:-590505 Msa1134180:intron
ACGCACCAATTCGTTCCGTT+TGG 0.415550 7_4:-592249 Msa1134180:five_prime_UTR
AGTAGGCACTGGTATTGATA+TGG 0.415592 7_4:+584935 None:intergenic
TGAAACAAAATCAACAGTTT+GGG 0.420070 7_4:-585620 Msa1134180:CDS
TGTAAATATGGGTAAAGCTA+TGG 0.420888 7_4:-585347 Msa1134180:CDS
GTATGGGTATGGGTGGTATG+GGG 0.421351 7_4:-585171 Msa1134180:CDS
CCTCTTGTGCCCGCTACATC+AGG 0.422749 7_4:-587123 Msa1134180:CDS
TACCAGATGCAACCTCCTAA+TGG 0.425576 7_4:-585127 Msa1134180:CDS
AATATCAGTTTCCGAATCTT+GGG 0.428028 7_4:+586425 None:intergenic
TTGCCACAGGGATCCTCAAC+AGG 0.429401 7_4:-585907 Msa1134180:CDS
CGGCATTAAAACCATCTGAT+TGG 0.430216 7_4:+586550 None:intergenic
CTGGAGTAAGAGATGTATCC+AGG 0.431098 7_4:+585995 None:intergenic
GGAAAGGGTTGCTGTGCATA+TGG 0.432753 7_4:+586150 None:intergenic
CCAATGCTTGAGTGTGAACC+AGG 0.432826 7_4:+589794 None:intergenic
GGCATAGGTCGTGCTGGTGC+TGG 0.437369 7_4:-585313 Msa1134180:CDS
ACCTAATCCAAATTCGATGA+TGG 0.437810 7_4:-585281 Msa1134180:CDS
TAGAAGCTGAAAAGCCTGGC+TGG 0.438107 7_4:+586199 None:intergenic
AGATGATCATGTCAGTAGTC+TGG 0.438186 7_4:-590766 Msa1134180:CDS
GACGAGAACCCAGGCATGCC+AGG 0.440096 7_4:+586111 None:intergenic
TGGGTATGGGTGGTATGGGG+GGG 0.442031 7_4:-585168 Msa1134180:CDS
ACCTTCTTCATTGTAGCAGC+TGG 0.447293 7_4:+591342 None:intergenic
AACTGTGATGCTTGATCAGT+TGG 0.447537 7_4:+585790 None:intergenic
TTTGACAGTACTTGAGTACT+TGG 0.447802 7_4:-590565 Msa1134180:CDS
CCTGGGTTCTCGTCATCTAC+TGG 0.447849 7_4:-586102 Msa1134180:CDS
CTGGGAGCAGATGCAGAGTA+TGG 0.448787 7_4:+586486 None:intergenic
AGGCATGACATCCATGGGTA+TGG 0.450485 7_4:-585188 Msa1134180:CDS
GTTTCAAACTTATCTTTGGA+TGG 0.452212 7_4:+585637 None:intergenic
CTTGAGTACTTGGTGGCTCA+TGG 0.452669 7_4:-590555 Msa1134180:CDS
AAGAAAGAATCGTAGAGGTT+AGG 0.456321 7_4:-590250 Msa1134180:CDS
ATGGGAATGGGCAATGCTCC+CGG 0.457562 7_4:-585238 Msa1134180:CDS
ATGGGCATGGGTATGGGAAT+GGG 0.459007 7_4:-585250 Msa1134180:CDS
GTTTGGTGATTCACCATTCA+AGG 0.459359 7_4:-586634 Msa1134180:CDS
ATGGGTTCTGGTATGGGCAT+GGG 0.460258 7_4:-585262 Msa1134180:CDS
CACTCAAGCATTGGAAGCTA+TGG 0.466820 7_4:-589785 Msa1134180:CDS
CCAACAGCCTCTTCATAACT+AGG 0.467604 7_4:+587804 None:intergenic
GACAGTACTTGAGTACTTGG+TGG 0.468045 7_4:-590562 Msa1134180:CDS
TGGTCCAGATGAAGTTGAAA+AGG 0.468346 7_4:+586314 None:intergenic
CAGATCCAAACGGAACGAAT+TGG 0.468424 7_4:+592244 None:intergenic
TATGGGCATGGGTATGGGAA+TGG 0.468916 7_4:-585251 Msa1134180:CDS
GCAGCAGCAGTTACTTCAGT+TGG 0.469123 7_4:+587570 None:intergenic
CTGGTCAACCTGGCATGCCT+GGG 0.469496 7_4:-586119 Msa1134180:CDS
AAGAAGATCGTTATGCGAGC+AGG 0.469595 7_4:-589751 Msa1134180:CDS
GGCATTAAAACCATCTGATT+GGG 0.472191 7_4:+586551 None:intergenic
ATGGGTAAAGCTATGGGATC+AGG 0.472433 7_4:-585340 Msa1134180:CDS
GGCAATGCTCCCGGTGGTAT+GGG 0.473961 7_4:-585229 Msa1134180:CDS
GATGGGTTCTGGTATGGGCA+TGG 0.474191 7_4:-585263 Msa1134180:CDS
CGGTTACAGAGATGATGATA+GGG 0.474593 7_4:-589606 Msa1134180:CDS
GTAACATCAACTGTAAATAT+GGG 0.478597 7_4:-585358 Msa1134180:CDS
CAAAAGGTGGCTGCATAGAA+TGG 0.478813 7_4:+586079 None:intergenic
GGCTGGGAAAATTGACCACT+TGG 0.479333 7_4:+586216 None:intergenic
ATCACAAACTTTCCCCATCA+TGG 0.481463 7_4:-585835 Msa1134180:CDS
TCGCCAAAATTAGAAGTGGT+TGG 0.482153 7_4:+587195 None:intergenic
ATGGGTATATGATGAGCTAA+AGG 0.482711 7_4:+585726 None:intergenic
GGGAAAATTGACCACTTGGA+AGG 0.482889 7_4:+586220 None:intergenic
AGACTACTGACATGATCATC+TGG 0.483128 7_4:+590768 None:intergenic
ACGGTTACAGAGATGATGAT+AGG 0.483970 7_4:-589607 Msa1134180:CDS
GTAAATATGGGTAAAGCTAT+GGG 0.484647 7_4:-585346 Msa1134180:CDS
ACATCCATGGGTATGGGTAT+GGG 0.486043 7_4:-585181 Msa1134180:CDS
AGTTCATACCTTTCAGGCAC+AGG 0.488307 7_4:+587768 None:intergenic
ATTTGTGCCGGTTGTGCTGT+TGG 0.488539 7_4:+585856 None:intergenic
TCGTTATGGTAGAGATTATG+AGG 0.489581 7_4:-589645 Msa1134180:CDS
TCTCATCGGTATCCACCATA+TGG 0.490499 7_4:+585031 None:intergenic
ATTATAGTTACCTGGCATGT+TGG 0.492662 7_4:+585090 None:intergenic
TTCTGCTGTGATGTCATCTC+AGG 0.493420 7_4:+586372 None:intergenic
TTTACCTTCTGTTCAATGCC+AGG 0.495324 7_4:+591110 None:intergenic
CCTCCTAATGGAATGCCTCC+TGG 0.495524 7_4:-585115 Msa1134180:CDS
TGGGTCCAATAATTTCAATC+AGG 0.496058 7_4:-587043 Msa1134180:intron
TACGGTGAAGCATTGGGAGC+AGG 0.498349 7_4:+585697 None:intergenic
TGCTCAAAGCACCCTAAAGA+AGG 0.498537 7_4:+584780 None:intergenic
GATTCCAGTGGAAGAGATCA+AGG 0.499927 7_4:-590322 Msa1134180:intron
GACCCACGTGGTCCTACATC+AGG 0.501026 7_4:-587480 Msa1134180:intron
TCGATGATGGGTTCTGGTAT+GGG 0.502187 7_4:-585268 Msa1134180:CDS
TATGGAAGAGAAAGAGAAAT+GGG 0.502207 7_4:-589704 Msa1134180:CDS
ATGGGTATGGGAGGTTACGG+AGG 0.502622 7_4:-585211 Msa1134180:CDS
CTCAGAGCCCTGTGCCTGAA+AGG 0.503032 7_4:-587776 Msa1134180:intron
AGTAAGCAATAACCCAAGTA+AGG 0.503609 7_4:+584724 None:intergenic
GCATGAGGGGACGAGCCTCT+TGG 0.505127 7_4:+587651 None:intergenic
GGTATGGGAGGTTACGGAGG+AGG 0.507832 7_4:-585208 Msa1134180:CDS
ATAGCATACGGTGAAGCATT+GGG 0.508701 7_4:+585691 None:intergenic
CTTCGAATCCATTAATAGGA+AGG 0.510293 7_4:-585413 Msa1134180:CDS
CGGAGGAGGCATGACATCCA+TGG 0.510517 7_4:-585194 Msa1134180:CDS
TGAACCAGTGTTTGCTTCAG+GGG 0.511259 7_4:+587092 None:intergenic
GCTCCCGGTGGTATGGGTAT+GGG 0.511770 7_4:-585223 Msa1134180:CDS
CCACTTGGAAGGGTTTGTGC+AGG 0.512945 7_4:+586231 None:intergenic
CTGTGCATATGGACTGGTAG+AGG 0.513809 7_4:+586161 None:intergenic
TAATAGGAAGGAAAAGAGAA+TGG 0.513835 7_4:-585401 Msa1134180:CDS
CAGAGCTTCTTTGGACAACA+AGG 0.516128 7_4:-585760 Msa1134180:CDS
TTATGGAAGAGAAAGAGAAA+TGG 0.516264 7_4:-589705 Msa1134180:CDS
GGTTATGCTCAACAGCCATA+TGG 0.517930 7_4:-585046 Msa1134180:CDS
TGCTACTAGCAATGAACCAT+GGG 0.518050 7_4:-590922 Msa1134180:CDS
AACTGGGAGTTAGCAGAGAA+AGG 0.518088 7_4:+586453 None:intergenic
GGAAAATTGACCACTTGGAA+GGG 0.518359 7_4:+586221 None:intergenic
GTCATCTCAGGTAATGGTGC+AGG 0.518666 7_4:+586384 None:intergenic
TGATGTTACAGGTGTGTTAG+TGG 0.518674 7_4:+585372 None:intergenic
AATCGCGATGGAGATCGTTA+TGG 0.526840 7_4:-589659 Msa1134180:CDS
GATGTTACAGGTGTGTTAGT+GGG 0.528282 7_4:+585373 None:intergenic
TAGTAGTCAACATCAACATT+CGG 0.530020 7_4:-584913 Msa1134180:three_prime_UTR
GGCTTTACCGAGACGAGTGT+TGG 0.530398 7_4:+589501 None:intergenic
ACTAGCAGCAACAGATGTAC+TGG 0.530914 7_4:+587548 None:intergenic
ATGTTATTATTATAGTTACC+TGG 0.532550 7_4:+585082 None:intergenic
AAGCAGTAGATCCTCCATGA+TGG 0.533157 7_4:+585821 None:intergenic
ATCCAGTAGGAGCAGAGGTT+AGG 0.535619 7_4:+587613 None:intergenic
CCTGGTTCACACTCAAGCAT+TGG 0.537566 7_4:-589794 Msa1134180:CDS
ACCTCCCATACCCATACCAC+CGG 0.537775 7_4:+585219 None:intergenic
CAGCACGAGCCAGCACCAAA+AGG 0.538632 7_4:+591369 None:intergenic
CAGCGTTGTGTACCAGTGAC+GGG 0.539082 7_4:-584756 Msa1134180:three_prime_UTR
AATAGCATACGGTGAAGCAT+TGG 0.539962 7_4:+585690 None:intergenic
GGTCAACTTACTCCTCATCA+AGG 0.540194 7_4:-586276 Msa1134180:CDS
AGGTTATTCTATCCCGTCAC+TGG 0.540940 7_4:+584744 None:intergenic
TGTTGATGTTGACTACTAGT+AGG 0.541373 7_4:+584918 None:intergenic
AGCAGTAGATCCTCCATGAT+GGG 0.542007 7_4:+585822 None:intergenic
AGTTCCTGGCATTGAACAGA+AGG 0.542788 7_4:-591114 Msa1134180:intron
ACAGAAGTATCAGCCTTGAA+TGG 0.544782 7_4:+586621 None:intergenic
GGTATGGGTATGGGAGGTTA+CGG 0.544805 7_4:-585214 Msa1134180:CDS
TGTGATGTCATCTCAGGTAA+TGG 0.544951 7_4:+586378 None:intergenic
CCTCCTGGTTCCAACATGCC+AGG 0.545416 7_4:-585100 Msa1134180:CDS
TGGGTATATGATGAGCTAAA+GGG 0.547010 7_4:+585727 None:intergenic
GTTGAAATTCCTGATGTAGC+GGG 0.547079 7_4:+587114 None:intergenic
TTGCAGGGATGTTGAAACTT+CGG 0.547701 7_4:-587685 Msa1134180:intron
CCTAATCCAAATTCGATGAT+GGG 0.547928 7_4:-585280 Msa1134180:CDS
TATAATGGATCTATGAACAG+TGG 0.548968 7_4:-585937 Msa1134180:CDS
AGCAGGGAGGAAGATAGAAA+TGG 0.551877 7_4:-589734 Msa1134180:CDS
AATGAACCATGGGGTCCTCA+TGG 0.552520 7_4:-590912 Msa1134180:CDS
TTGACCAGAATGAGAAGGAA+AGG 0.552922 7_4:+586134 None:intergenic
ATGGGATCAGGTTCAGGCAT+AGG 0.554092 7_4:-585328 Msa1134180:CDS
TGACCGCCTTGAGAAGCAAA+AGG 0.554824 7_4:+586063 None:intergenic
AGAGATTATGAGGAACGTTA+CGG 0.556905 7_4:-589635 Msa1134180:CDS
CATTATTCTCATAGATGGAA+AGG 0.557104 7_4:-584998 Msa1134180:three_prime_UTR
GAACTAGAAGCTGAAAAGCC+TGG 0.557523 7_4:+586195 None:intergenic
AATAATAACATGATGCGTCC+CGG 0.558590 7_4:-585070 Msa1134180:CDS
CTGGATACATCTCTTACTCC+AGG 0.559189 7_4:-585994 Msa1134180:CDS
AAATTATTGGACCCAGAGGA+TGG 0.560427 7_4:+587051 None:intergenic
CTACGGTGGATTGTACTCCC+TGG 0.560818 7_4:-586013 Msa1134180:CDS
ACTGCTTGCAGACATTGCTC+AGG 0.560991 7_4:-590886 Msa1134180:CDS
AGAAGCTGAAAAGCCTGGCT+GGG 0.561812 7_4:+586200 None:intergenic
TTACCTGGCATGTTGGAACC+AGG 0.564606 7_4:+585097 None:intergenic
TGAGGAGTAAGTTGACCAGT+TGG 0.567121 7_4:+586282 None:intergenic
TTTGGCGAAATAGATTTGCT+CGG 0.568793 7_4:-587180 Msa1134180:CDS
GGTTGTGCTGTTGGAGCTTG+GGG 0.568869 7_4:+585865 None:intergenic
TTTGGGCAGACACATTAAGC+AGG 0.569763 7_4:-585603 Msa1134180:CDS
CAGTGGGAACTACTTGCCAC+AGG 0.570242 7_4:-585920 Msa1134180:CDS
ACCAGCTGCTACAATGAAGA+AGG 0.570837 7_4:-591343 Msa1134180:exon
ACGACACTGGCAAGAATTGG+CGG 0.572387 7_4:-590733 Msa1134180:CDS
AATGTTCAATTCAATCTCAT+CGG 0.572591 7_4:+585017 None:intergenic
GAATTGGCGGCATGTCTACA+AGG 0.575568 7_4:-590720 Msa1134180:intron
CCTGATGTAGCGGGCACAAG+AGG 0.575962 7_4:+587123 None:intergenic
GGTTCAGGCATAGGTCGTGC+TGG 0.577633 7_4:-585319 Msa1134180:CDS
TTCTTTCTTTATCATTCACA+AGG 0.578691 7_4:+590264 None:intergenic
AATCGTAGAGGTTAGGCAGA+AGG 0.578716 7_4:-590243 Msa1134180:CDS
AAGACCAATCACTGGAAGCA+AGG 0.579896 7_4:-588033 Msa1134180:intron
TAGTACTGCTGTTTCTACTC+AGG 0.580365 7_4:-587529 Msa1134180:CDS
TCAGCGTTGTGTACCAGTGA+CGG 0.580518 7_4:-584757 Msa1134180:three_prime_UTR
AGGATTATCACTTGCATGAG+GGG 0.581255 7_4:+587638 None:intergenic
GGCATGACATCCATGGGTAT+GGG 0.582541 7_4:-585187 Msa1134180:CDS
GAAGTTGAAAAGGAAGGTGA+AGG 0.582558 7_4:+586324 None:intergenic
TATTTCGCCAAAATTAGAAG+TGG 0.583832 7_4:+587191 None:intergenic
TGAGGTGCATGGTGTTGAGA+TGG 0.584126 7_4:+586588 None:intergenic
TGCTCCTCCTAGTTATGAAG+AGG 0.584725 7_4:-587811 Msa1134180:CDS
CCAGGAGGCATTCCATTAGG+AGG 0.584810 7_4:+585115 None:intergenic
GGAAAGTTTGTGATTTGTGC+CGG 0.585741 7_4:+585844 None:intergenic
GGTGAAGGTTGGCCAAAAGT+AGG 0.586008 7_4:+586339 None:intergenic
ATTATGATGATACAAGGAGC+AGG 0.587423 7_4:-589559 Msa1134180:CDS
TGACCAGAATGAGAAGGAAA+GGG 0.588561 7_4:+586135 None:intergenic
CCTAGTTATGAAGAGGCTGT+TGG 0.589371 7_4:-587804 Msa1134180:CDS
ATTGGGAGCAGGCACTTGAT+GGG 0.590677 7_4:+585708 None:intergenic
ATCTCAGGTAATGGTGCAGG+AGG 0.590753 7_4:+586387 None:intergenic
TTGAATGGTGAATCACCAAA+CGG 0.591233 7_4:+586636 None:intergenic
AGAAGATCCAGTAGGAGCAG+AGG 0.591613 7_4:+587608 None:intergenic
TAAAGTTGAAGACCAATCAC+TGG 0.591701 7_4:-588041 Msa1134180:CDS
TTGTGAAGGAAAGCCTGTTG+AGG 0.592434 7_4:+585894 None:intergenic
GAGGAAGATAGAAATGGCTA+TGG 0.592967 7_4:-589728 Msa1134180:CDS
AGACACATTAAGCAGGGGAC+TGG 0.593975 7_4:-585596 Msa1134180:CDS
GCTTGGGGAGTCATTTGTGA+AGG 0.593976 7_4:+585880 None:intergenic
ACGATGGCCAACACTCGTCT+CGG 0.595349 7_4:-589508 Msa1134180:intron
ACCACCCATACCCATACCCA+TGG 0.596082 7_4:+585177 None:intergenic
GTAGGAGCAGAGGTTAGGCT+AGG 0.598670 7_4:+587618 None:intergenic
GAATAAACATACACCACACT+AGG 0.598796 7_4:+584844 None:intergenic
AGAAGATCGTTATGCGAGCA+GGG 0.603296 7_4:-589750 Msa1134180:CDS
GAACCTGATTCAGATCCAAA+CGG 0.604266 7_4:+592234 None:intergenic
TAGGATTATCACTTGCATGA+GGG 0.604332 7_4:+587637 None:intergenic
GAGAAAGGTTGAGTGTCACT+GGG 0.605764 7_4:+586468 None:intergenic
GTTCAGTAGTCTGAGGTGCA+TGG 0.605954 7_4:+586577 None:intergenic
ATAATGGATCTATGAACAGT+GGG 0.606177 7_4:-585936 Msa1134180:CDS
TTGGGCAGACACATTAAGCA+GGG 0.606341 7_4:-585602 Msa1134180:CDS
GTTCATACCTTTCAGGCACA+GGG 0.607284 7_4:+587769 None:intergenic
GGGATAGAATAACCTTACTT+GGG 0.607500 7_4:-584736 Msa1134180:three_prime_UTR
ATGCTACTAGCAATGAACCA+TGG 0.607785 7_4:-590923 Msa1134180:CDS
CCAGGTGGAATGTATAGACC+TGG 0.608193 7_4:-589812 Msa1134180:CDS
TTGAAAAGGAAGGTGAAGGT+TGG 0.609242 7_4:+586328 None:intergenic
GGAGGAGGCATGACATCCAT+GGG 0.610347 7_4:-585193 Msa1134180:CDS
CAACTTTACAGACCTGATGT+AGG 0.610482 7_4:+587468 None:intergenic
AGGTTTCGCAATAATACACC+AGG 0.613462 7_4:-589830 Msa1134180:CDS
GATGATCGGTACAATCGCGA+TGG 0.615288 7_4:-589671 Msa1134180:CDS
TAATATATCAAACCACCTGT+TGG 0.617109 7_4:+584674 None:intergenic
TGGCTGTTGAGCATAACCAC+CGG 0.617470 7_4:+585051 None:intergenic
TCAACCCCTGAAGCAAACAC+TGG 0.617887 7_4:-587096 Msa1134180:CDS
CCAGTAGATGACGAGAACCC+AGG 0.618209 7_4:+586102 None:intergenic
GCTCAAAGCACCCTAAAGAA+GGG 0.618694 7_4:+584781 None:intergenic
TCAATGCCAATATCTGCTAA+CGG 0.618831 7_4:+585436 None:intergenic
CTAGGATTATCACTTGCATG+AGG 0.619253 7_4:+587636 None:intergenic
TTAAAACCATCTGATTGGGA+TGG 0.619276 7_4:+586555 None:intergenic
GGTTGAAATTCCTGATGTAG+CGG 0.624098 7_4:+587113 None:intergenic
AAACCCAAAATTAGACATGT+CGG 0.624530 7_4:+586530 None:intergenic
ATTATGAGGAACGTTACGGT+AGG 0.625033 7_4:-589631 Msa1134180:CDS
CCAGGTTGACCAGAATGAGA+AGG 0.625884 7_4:+586129 None:intergenic
TTCTGTAAAGTGACCTAGTG+TGG 0.625999 7_4:-584857 Msa1134180:three_prime_UTR
CCAGGTCTATACATTCCACC+TGG 0.626376 7_4:+589812 None:intergenic
CCAGATGAAGTTGAAAAGGA+AGG 0.626716 7_4:+586318 None:intergenic
TATGCTCAACAGCCATATGG+TGG 0.626869 7_4:-585043 Msa1134180:CDS
ACTGAACCATCCCAATCAGA+TGG 0.626946 7_4:-586561 Msa1134180:CDS
CAAACAAGCGGTCATACCTA+CGG 0.628165 7_4:-586030 Msa1134180:CDS
TGTTGACTACTAGTAGGCAC+TGG 0.629763 7_4:+584924 None:intergenic
AGTGTTCCATGAGGACCCCA+TGG 0.630276 7_4:+590906 None:intergenic
ACTACAATTATGATGATACA+AGG 0.633869 7_4:-589565 Msa1134180:CDS
CCCGGTGGTATGGGTATGGG+AGG 0.634885 7_4:-585220 Msa1134180:CDS
TCCATGGGTATGGGTATGGG+TGG 0.636046 7_4:-585178 Msa1134180:CDS
GGGTCAAAGAAATCATCAGT+GGG 0.636273 7_4:+587498 None:intergenic
GGCTGTTGAGCATAACCACC+GGG 0.636968 7_4:+585052 None:intergenic
GAGGAACGTTACGGTAGGGA+CGG 0.637581 7_4:-589626 Msa1134180:CDS
GGTGCCGCTGAAATAGCATA+CGG 0.637836 7_4:+585679 None:intergenic
TGGAGTAAGAGATGTATCCA+GGG 0.638728 7_4:+585996 None:intergenic
TTTACAGGAGAAGATCCAGT+AGG 0.641156 7_4:+587600 None:intergenic
TGGGCTCTAGAGATGATGAT+CGG 0.644727 7_4:-589685 Msa1134180:CDS
TGGAAACGAATTAACGACAC+TGG 0.645325 7_4:-590746 Msa1134180:CDS
TGGGTCAAAGAAATCATCAG+TGG 0.653510 7_4:+587497 None:intergenic
TTATGAGGAACGTTACGGTA+GGG 0.653674 7_4:-589630 Msa1134180:CDS
TACAAACGAGCAGACTTCAG+CGG 0.653752 7_4:-587857 Msa1134180:intron
GGGTTGCTGTGCATATGGAC+TGG 0.655391 7_4:+586155 None:intergenic
AGACCTGATGTAGGACCACG+TGG 0.656943 7_4:+587477 None:intergenic
TGATAAAGAAAGAATCGTAG+AGG 0.663345 7_4:-590255 Msa1134180:CDS
TCGGCAGAATCTGCTCCAAG+AGG 0.664433 7_4:-587666 Msa1134180:CDS
CAATCTACTGCACAAACAAG+CGG 0.666091 7_4:-586042 Msa1134180:CDS
CCTCCCATACCCATACCACC+GGG 0.667619 7_4:+585220 None:intergenic
AACGGAACGAATTGGTGCGT+CGG 0.668463 7_4:+592252 None:intergenic
GCAGTAGATCCTCCATGATG+GGG 0.668568 7_4:+585823 None:intergenic
AGAGCTTCTTTGGACAACAA+GGG 0.670278 7_4:-585759 Msa1134180:CDS
ATAATAACAACACAGAAGAG+AGG 0.671180 7_4:-592342 Msa1134180:five_prime_UTR
ATTGAAATTATTGGACCCAG+AGG 0.671697 7_4:+587047 None:intergenic
AGTGGGAACTACTTGCCACA+GGG 0.674040 7_4:-585919 Msa1134180:CDS
GCAGCTGAGAAACCTTGATG+AGG 0.675499 7_4:+586264 None:intergenic
TTTCGCAATAATACACCAGG+TGG 0.675550 7_4:-589827 Msa1134180:CDS
CCGCCTTGAGAAGCAAAAGG+TGG 0.677466 7_4:+586066 None:intergenic
TGATGCTTGATCAGTTGGAG+AGG 0.677645 7_4:+585795 None:intergenic
GGTTACAGAGATGATGATAG+GGG 0.678995 7_4:-589605 Msa1134180:CDS
TGGGCAGACACATTAAGCAG+GGG 0.681536 7_4:-585601 Msa1134180:CDS
ACAGCCTCTTCATAACTAGG+AGG 0.683929 7_4:+587807 None:intergenic
GATGATTTCTTTGACCCACG+TGG 0.686453 7_4:-587492 Msa1134180:CDS
TGGGATGGTTCAGTAGTCTG+AGG 0.687217 7_4:+586570 None:intergenic
TTCACCGTATGCTATTTCAG+CGG 0.691527 7_4:-585683 Msa1134180:CDS
CCTGCACAAACCCTTCCAAG+TGG 0.692553 7_4:-586231 Msa1134180:CDS
ACAAGCGGTCATACCTACGG+TGG 0.694635 7_4:-586027 Msa1134180:CDS
CCTGGCATGTTGGAACCAGG+AGG 0.695127 7_4:+585100 None:intergenic
GATCGTGATTTCGATGACGA+TGG 0.695675 7_4:-589524 Msa1134180:CDS
CAGGGAGTACAATCCACCGT+AGG 0.701137 7_4:+586014 None:intergenic
GATGCTTGATCAGTTGGAGA+GGG 0.703924 7_4:+585796 None:intergenic
GGAATGGGCAATGCTCCCGG+TGG 0.716650 7_4:-585235 Msa1134180:CDS
AATAACATGATGCGTCCCGG+TGG 0.724789 7_4:-585067 Msa1134180:CDS
ACAAACTTTCCCCATCATGG+AGG 0.725140 7_4:-585832 Msa1134180:CDS
TCTGCAAGCAGTGTTCCATG+AGG 0.732421 7_4:+590897 None:intergenic
AGATCGTTATGCGAGCAGGG+AGG 0.744423 7_4:-589747 Msa1134180:CDS
AAGCCTGTTGAGGATCCCTG+TGG 0.751881 7_4:+585904 None:intergenic
GCTACTAGCAATGAACCATG+GGG 0.772068 7_4:-590921 Msa1134180:CDS
GACCTGATGTAGGACCACGT+GGG 0.783038 7_4:+587478 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGAATTTGTAAAATA+AGG + chr7_4:586075-586094 None:intergenic 10.0%
!!! ATAAATCTAAAATGATTTAA+AGG - chr7_4:587004-587023 Msa1134180:intron 10.0%
!!! ATTTTAAAAAAATCATCTTT+CGG + chr7_4:587628-587647 None:intergenic 10.0%
!!! TTTTATTTTTGTAAAAAAGT+TGG + chr7_4:587953-587972 None:intergenic 10.0%
!! TATTAAATTTATTGACAAAT+TGG - chr7_4:588297-588316 Msa1134180:intron 10.0%
!!! TTGATTAAATTTTTCTATGT+AGG - chr7_4:585186-585205 Msa1134180:CDS 15.0%
!! ACATAAAAATATAAATGTCT+CGG + chr7_4:585274-585293 None:intergenic 15.0%
!! TATATTAGCTAAACAAAAAT+CGG - chr7_4:585380-585399 Msa1134180:CDS 15.0%
!!! TTTACTAATTTATCGTTTTA+TGG - chr7_4:585791-585810 Msa1134180:CDS 15.0%
!!! TTACTAATTTATCGTTTTAT+GGG - chr7_4:585792-585811 Msa1134180:CDS 15.0%
!! GGTTATAATACATAAAATTA+AGG + chr7_4:586054-586073 None:intergenic 15.0%
!!! GGTTACATTATAATATTTTA+CGG + chr7_4:586659-586678 None:intergenic 15.0%
!! TATTCATAATTGGATTAAAA+TGG - chr7_4:588042-588061 Msa1134180:CDS 15.0%
!!! AGAAATTTATTCTTATGTTT+TGG - chr7_4:588076-588095 Msa1134180:intron 15.0%
!!! TACATTGAAGTATTTATTAA+TGG - chr7_4:588368-588387 Msa1134180:intron 15.0%
!! AAATACATGCAAATTAATTA+GGG - chr7_4:588453-588472 Msa1134180:intron 15.0%
!! ATATTATATTGTATTTCCTT+TGG - chr7_4:589731-589750 Msa1134180:CDS 15.0%
!! TATTATATTGTATTTCCTTT+GGG - chr7_4:589732-589751 Msa1134180:CDS 15.0%
!!! TTGGTTTTCAATTTTTAAAA+AGG - chr7_4:590282-590301 Msa1134180:CDS 15.0%
!! TTATGATTATGCTTATGATT+AGG - chr7_4:584931-584950 Msa1134180:three_prime_UTR 20.0%
!!! TTGTGTATGAATTGATTTTT+TGG - chr7_4:585133-585152 Msa1134180:CDS 20.0%
!! GTATTATGTTTGTGATTAAT+TGG - chr7_4:585329-585348 Msa1134180:CDS 20.0%
!!! TTAATGTATAGTTGCTATTT+TGG - chr7_4:585821-585840 Msa1134180:CDS 20.0%
!!! TAATGTATAGTTGCTATTTT+GGG - chr7_4:585822-585841 Msa1134180:CDS 20.0%
!! TTTGAACAGAAGATAATAAT+TGG - chr7_4:585979-585998 Msa1134180:CDS 20.0%
!! AATATGATCACATGATAATA+TGG + chr7_4:586030-586049 None:intergenic 20.0%
!! AGAACATTCTTATCAAATAT+CGG - chr7_4:586550-586569 Msa1134180:CDS 20.0%
!! ACTAACAGCATATAAATATT+AGG + chr7_4:586600-586619 None:intergenic 20.0%
!!! GGAATATTACATTTTTTATC+AGG + chr7_4:586680-586699 None:intergenic 20.0%
!!! TGATTTTAGATTGAGTATAA+TGG + chr7_4:587172-587191 None:intergenic 20.0%
!!! ATTTTCTTAAACAATTTTCC+AGG - chr7_4:587205-587224 Msa1134180:intron 20.0%
!!! ATTTATCAGAGTTGATATAT+AGG + chr7_4:587578-587597 None:intergenic 20.0%
!!! GATGATTTTTTTAAAATGCT+TGG - chr7_4:587631-587650 Msa1134180:CDS 20.0%
!!! TTTTTTTCTTCTTTCTGAAT+TGG - chr7_4:587712-587731 Msa1134180:intron 20.0%
!! TTAAGCAATAACATAAAGTA+AGG + chr7_4:587901-587920 None:intergenic 20.0%
!! CTTTGATCTTTATTCATAAT+TGG - chr7_4:588032-588051 Msa1134180:intron 20.0%
!!! TCTTTATTGATTATTAGAGT+TGG + chr7_4:588169-588188 None:intergenic 20.0%
!! GAAATACATGCAAATTAATT+AGG - chr7_4:588452-588471 Msa1134180:intron 20.0%
!! TCAAAAAGGATCTTATAAAA+AGG - chr7_4:588513-588532 Msa1134180:intron 20.0%
!! GCATAATAATTTCTTAAACA+GGG + chr7_4:589665-589684 None:intergenic 20.0%
!! ATTATATTGTATTTCCTTTG+GGG - chr7_4:589733-589752 Msa1134180:CDS 20.0%
!! AAATGAATTTGTAAATGACT+TGG - chr7_4:590096-590115 Msa1134180:intron 20.0%
!!! TTTTGTTTCAAACTTATCTT+TGG + chr7_4:591425-591444 None:intergenic 20.0%
!! ATGTTATTATTATAGTTACC+TGG + chr7_4:591976-591995 None:intergenic 20.0%
!!! TACTACAATTCTTTTCTTTT+TGG - chr7_4:592246-592265 Msa1134180:five_prime_UTR 20.0%
!!! ACTACAATTCTTTTCTTTTT+GGG - chr7_4:592247-592266 Msa1134180:five_prime_UTR 20.0%
!! AGATTTTCACAACAACATAA+AGG + chr7_4:585446-585465 None:intergenic 25.0%
!! GTGCTTGAAAATATATCTTT+TGG - chr7_4:585563-585582 Msa1134180:intron 25.0%
!! AATCTGAGCTTTAATTGAAT+CGG - chr7_4:585612-585631 Msa1134180:CDS 25.0%
!!! TTATTTTGTAGATAGCAGTT+TGG - chr7_4:585662-585681 Msa1134180:CDS 25.0%
!! TATTTTGTAGATAGCAGTTT+GGG - chr7_4:585663-585682 Msa1134180:CDS 25.0%
! AAGATAATAATTGGTGTGTA+AGG - chr7_4:585988-586007 Msa1134180:CDS 25.0%
! AATTTAGATGTCAAAGCTTA+CGG + chr7_4:586206-586225 None:intergenic 25.0%
!! ATGTCTACAAGGTATTAATT+CGG - chr7_4:586346-586365 Msa1134180:CDS 25.0%
! GGAATCAATATATTGAAAGT+CGG + chr7_4:586719-586738 None:intergenic 25.0%
!!! TTTCAATATATTGATTCCAG+TGG - chr7_4:586721-586740 Msa1134180:intron 25.0%
! TTCTTTCTTTATCATTCACA+AGG + chr7_4:586794-586813 None:intergenic 25.0%
!! TTCTAGTTATATAAAGCATC+AGG - chr7_4:586901-586920 Msa1134180:intron 25.0%
! ATTATGGATTTACCAAAACT+GGG + chr7_4:586962-586981 None:intergenic 25.0%
!! GCAAAATAAAGGATTTTCAT+TGG + chr7_4:587060-587079 None:intergenic 25.0%
! ACTACAATTATGATGATACA+AGG - chr7_4:587490-587509 Msa1134180:CDS 25.0%
!! AAATCATCTTTCGGATTTTA+TGG + chr7_4:587619-587638 None:intergenic 25.0%
!!! TTTTTTTAAAATGCTTGGCT+AGG - chr7_4:587636-587655 Msa1134180:CDS 25.0%
! ATGTCTACATAAATACTCAA+GGG + chr7_4:587782-587801 None:intergenic 25.0%
! AATAACATAAAGTAAGGATG+AGG + chr7_4:587895-587914 None:intergenic 25.0%
! AATTTCAAACTGAAAATGCT+TGG + chr7_4:587983-588002 None:intergenic 25.0%
! TATAGCACCTATATCATATA+TGG - chr7_4:588009-588028 Msa1134180:intron 25.0%
! ATCAAAGCCATATATGATAT+AGG + chr7_4:588019-588038 None:intergenic 25.0%
! ATGCAGTTGAAAATTCAAAA+AGG - chr7_4:588499-588518 Msa1134180:intron 25.0%
!! TACAACATAAATGGTATTGA+GGG - chr7_4:588629-588648 Msa1134180:intron 25.0%
!!! TAACAACTCGTTTTTTTACA+CGG + chr7_4:588727-588746 None:intergenic 25.0%
! TGTTATGCTGAAGAATAATA+AGG - chr7_4:588742-588761 Msa1134180:intron 25.0%
! GAATTATCAGAATAGGATTA+TGG - chr7_4:588838-588857 Msa1134180:intron 25.0%
! GATAATATTCATAAGAGGTT+CGG + chr7_4:589346-589365 None:intergenic 25.0%
! ATCGAGATAATATTCATAAG+AGG + chr7_4:589351-589370 None:intergenic 25.0%
! CGCATAATAATTTCTTAAAC+AGG + chr7_4:589666-589685 None:intergenic 25.0%
! TCATACCTGATTGAAATTAT+TGG + chr7_4:590020-590039 None:intergenic 25.0%
!! GAATCTGTATGATTATTTCT+AGG - chr7_4:590038-590057 Msa1134180:intron 25.0%
!! TAGGTAGAATTCTGAAAAAT+TGG - chr7_4:590263-590282 Msa1134180:CDS 25.0%
! ATGTATTCTCAATCACAAAA+TGG - chr7_4:591094-591113 Msa1134180:intron 25.0%
! CAATCACAAAATGGATATAA+TGG - chr7_4:591103-591122 Msa1134180:intron 25.0%
! TTGAAACAAAATCAACAGTT+TGG - chr7_4:591434-591453 Msa1134180:intron 25.0%
! TGAAACAAAATCAACAGTTT+GGG - chr7_4:591435-591454 Msa1134180:intron 25.0%
! CTGGTTAATTTAAACATATC+TGG - chr7_4:591478-591497 Msa1134180:intron 25.0%
! ATTCTAATGTTGATCTTATC+TGG - chr7_4:591551-591570 Msa1134180:intron 25.0%
!! ATATTTACAGTTGATGTTAC+AGG + chr7_4:591697-591716 None:intergenic 25.0%
! TGTAACATCAACTGTAAATA+TGG - chr7_4:591696-591715 Msa1134180:intron 25.0%
! GTAACATCAACTGTAAATAT+GGG - chr7_4:591697-591716 Msa1134180:intron 25.0%
! AATGTTCAATTCAATCTCAT+CGG + chr7_4:592041-592060 None:intergenic 25.0%
! TTGAACATTATTCTCATAGA+TGG - chr7_4:592052-592071 Msa1134180:intron 25.0%
!! CTACAATTCTTTTCTTTTTG+GGG - chr7_4:592248-592267 Msa1134180:five_prime_UTR 25.0%
ATAATAACAACACAGAAGAG+AGG - chr7_4:584713-584732 Msa1134180:three_prime_UTR 30.0%
!!! ATTTGAATGTTTTAGCTGTG+AGG - chr7_4:584966-584985 Msa1134180:three_prime_UTR 30.0%
TCTTCAACATGAATCATTCA+AGG + chr7_4:585035-585054 None:intergenic 30.0%
! ATCTGAGCTTTTTATTGAGT+TGG - chr7_4:585462-585481 Msa1134180:intron 30.0%
!!! TTTTTATTGAGTTGGATACG+TGG - chr7_4:585470-585489 Msa1134180:intron 30.0%
TACGTGGAAAAAATTTGAAG+TGG - chr7_4:585486-585505 Msa1134180:intron 30.0%
CAATTAATGGTAACACTTAC+AGG + chr7_4:585760-585779 None:intergenic 30.0%
! ACCCTAATCCTATTTTGTAA+CGG - chr7_4:585863-585882 Msa1134180:CDS 30.0%
ATTTAGATGTCAAAGCTTAC+GGG + chr7_4:586205-586224 None:intergenic 30.0%
ATTCGGAATACTTTATGTTC+TGG - chr7_4:586363-586382 Msa1134180:CDS 30.0%
AATCAGTAAATGATGCAGAA+GGG + chr7_4:586400-586419 None:intergenic 30.0%
AGAGATCAAGGAAAAATGTT+AGG - chr7_4:586745-586764 Msa1134180:intron 30.0%
TGATAAAGAAAGAATCGTAG+AGG - chr7_4:586800-586819 Msa1134180:intron 30.0%
ATATCAGTAGAATTGTTGAG+AGG + chr7_4:586865-586884 None:intergenic 30.0%
!!! TTTTTAATTTCCCCCAGTTT+TGG - chr7_4:586947-586966 Msa1134180:intron 30.0%
TTATGGATTTACCAAAACTG+GGG + chr7_4:586961-586980 None:intergenic 30.0%
GATTATGGATTTACCAAAAC+TGG + chr7_4:586963-586982 None:intergenic 30.0%
GAAATAGAGAAGACAGATTA+TGG + chr7_4:586978-586997 None:intergenic 30.0%
TAATCTGTCTTCTCTATTTC+TGG - chr7_4:586978-586997 Msa1134180:intron 30.0%
GTATGACATGGAAAAATTGT+GGG - chr7_4:587107-587126 Msa1134180:CDS 30.0%
TTATGGAAGAGAAAGAGAAA+TGG - chr7_4:587350-587369 Msa1134180:intron 30.0%
TATGGAAGAGAAAGAGAAAT+GGG - chr7_4:587351-587370 Msa1134180:intron 30.0%
GCTTAAATGCTTAACTATTG+AGG + chr7_4:587757-587776 None:intergenic 30.0%
TGTCTACATAAATACTCAAG+GGG + chr7_4:587781-587800 None:intergenic 30.0%
GATGTCTACATAAATACTCA+AGG + chr7_4:587783-587802 None:intergenic 30.0%
TGAGTATTTATGTAGACATC+AGG - chr7_4:587783-587802 Msa1134180:CDS 30.0%
TATTAATCAAACGTCGTGTT+TGG + chr7_4:587837-587856 None:intergenic 30.0%
AAACACGACGTTTGATTAAT+AGG - chr7_4:587836-587855 Msa1134180:CDS 30.0%
TCTAGAAGATTGCTTATTTC+CGG - chr7_4:587862-587881 Msa1134180:intron 30.0%
GCTTAAAGCTGATGAATTAT+AGG - chr7_4:587915-587934 Msa1134180:intron 30.0%
ACTAACTTTCTTAATTCCAG+TGG + chr7_4:588269-588288 None:intergenic 30.0%
TAATTAATCCTCTCTCTTGA+AGG + chr7_4:588343-588362 None:intergenic 30.0%
CAAGTAAGCTACAACATAAA+TGG - chr7_4:588620-588639 Msa1134180:intron 30.0%
CTACAACATAAATGGTATTG+AGG - chr7_4:588628-588647 Msa1134180:intron 30.0%
TTAGCATGATAAACAAAACG+AGG - chr7_4:588701-588720 Msa1134180:intron 30.0%
TTCTGATAATTCGATAGTCA+AGG + chr7_4:588830-588849 None:intergenic 30.0%
GACTATCGAATTATCAGAAT+AGG - chr7_4:588831-588850 Msa1134180:intron 30.0%
! TTTATGCAATGTTTTCTCAG+AGG - chr7_4:588982-589001 Msa1134180:intron 30.0%
GAAACTTTCTGAGCAAAATT+CGG - chr7_4:589220-589239 Msa1134180:intron 30.0%
AAACTTTCTGAGCAAAATTC+GGG - chr7_4:589221-589240 Msa1134180:intron 30.0%
TATGAAAGTTCATACCTTTC+AGG + chr7_4:589296-589315 None:intergenic 30.0%
ATGAATATTATCTCGATTGC+AGG - chr7_4:589354-589373 Msa1134180:intron 30.0%
TGAATATTATCTCGATTGCA+GGG - chr7_4:589355-589374 Msa1134180:intron 30.0%
TCAGTTGGATTATTGTTTAC+AGG + chr7_4:589473-589492 None:intergenic 30.0%
!! TGCTTGTTATTATGTTGTGT+TGG - chr7_4:589608-589627 Msa1134180:CDS 30.0%
TTCAACATTATCCCATTAAG+CGG + chr7_4:589807-589826 None:intergenic 30.0%
TATTTCGCCAAAATTAGAAG+TGG + chr7_4:589867-589886 None:intergenic 30.0%
ATGCACGCTAAATCAAAAAA+GGG + chr7_4:590155-590174 None:intergenic 30.0%
TATGCACGCTAAATCAAAAA+AGG + chr7_4:590156-590175 None:intergenic 30.0%
AGGTTTATTATCATGCCATA+TGG + chr7_4:590224-590243 None:intergenic 30.0%
ATATGGCATGATAATAAACC+TGG - chr7_4:590223-590242 Msa1134180:intron 30.0%
TTATTCAAAGCTAAGAACTG+AGG + chr7_4:590315-590334 None:intergenic 30.0%
AAACCCAAAATTAGACATGT+CGG + chr7_4:590528-590547 None:intergenic 30.0%
!!! ACATGTCTAATTTTGGGTTT+GGG - chr7_4:590528-590547 Msa1134180:CDS 30.0%
AATATCAGTTTCCGAATCTT+GGG + chr7_4:590633-590652 None:intergenic 30.0%
!! TATAATGGATCTATGAACAG+TGG - chr7_4:591118-591137 Msa1134180:CDS 30.0%
!! ATAATGGATCTATGAACAGT+GGG - chr7_4:591119-591138 Msa1134180:CDS 30.0%
GGTTGAGAAACTAAAGAATT+TGG + chr7_4:591400-591419 None:intergenic 30.0%
GTTTCAAACTTATCTTTGGA+TGG + chr7_4:591421-591440 None:intergenic 30.0%
AGAGCATAATAGTTAACAGT+AGG + chr7_4:591578-591597 None:intergenic 30.0%
TTGACTTCGAATCCATTAAT+AGG - chr7_4:591638-591657 Msa1134180:intron 30.0%
! TCTCTTTTCCTTCCTATTAA+TGG + chr7_4:591653-591672 None:intergenic 30.0%
TAATAGGAAGGAAAAGAGAA+TGG - chr7_4:591654-591673 Msa1134180:intron 30.0%
TGTAAATATGGGTAAAGCTA+TGG - chr7_4:591708-591727 Msa1134180:intron 30.0%
GTAAATATGGGTAAAGCTAT+GGG - chr7_4:591709-591728 Msa1134180:intron 30.0%
CATTATTCTCATAGATGGAA+AGG - chr7_4:592057-592076 Msa1134180:intron 30.0%
TAGTAGTCAACATCAACATT+CGG - chr7_4:592142-592161 Msa1134180:intron 30.0%
! GTTGGTGTTCAAAAAATAAG+AGG + chr7_4:592366-592385 None:intergenic 30.0%
!!! CTTATTTTTTGAACACCAAC+AGG - chr7_4:592366-592385 Msa1134180:five_prime_UTR 30.0%
TAATATATCAAACCACCTGT+TGG + chr7_4:592384-592403 None:intergenic 30.0%
GCAAGATCGAAGAAATGAAA+TGG + chr7_4:584866-584885 None:intergenic 35.0%
!!! TGAGTTTTTGAGATGTGATG+TGG - chr7_4:585081-585100 Msa1134180:CDS 35.0%
TACGTAGCAAAAATTTGACG+TGG - chr7_4:585636-585655 Msa1134180:CDS 35.0%
! GCTACAATGAAGAAGGTTTT+TGG - chr7_4:585719-585738 Msa1134180:CDS 35.0%
!!! AGGTTTTTGGTCAAACTGTT+AGG - chr7_4:585732-585751 Msa1134180:CDS 35.0%
!!! GGTTTTTGGTCAAACTGTTA+GGG - chr7_4:585733-585752 Msa1134180:CDS 35.0%
GCCGTTACAAAATAGGATTA+GGG + chr7_4:585867-585886 None:intergenic 35.0%
AGCCGTTACAAAATAGGATT+AGG + chr7_4:585868-585887 None:intergenic 35.0%
AGAGTTAGCCGTTACAAAAT+AGG + chr7_4:585874-585893 None:intergenic 35.0%
CAATCAGTAAATGATGCAGA+AGG + chr7_4:586401-586420 None:intergenic 35.0%
TTTGACAGTACTTGAGTACT+TGG - chr7_4:586490-586509 Msa1134180:CDS 35.0%
AAGAAAGAATCGTAGAGGTT+AGG - chr7_4:586805-586824 Msa1134180:intron 35.0%
TATGGATTTACCAAAACTGG+GGG + chr7_4:586960-586979 None:intergenic 35.0%
GGTATGACATGGAAAAATTG+TGG - chr7_4:587106-587125 Msa1134180:CDS 35.0%
GATAGAAATGGCTATGGTTA+TGG - chr7_4:587333-587352 Msa1134180:intron 35.0%
TCGTTATGGTAGAGATTATG+AGG - chr7_4:587410-587429 Msa1134180:intron 35.0%
AGAGATTATGAGGAACGTTA+CGG - chr7_4:587420-587439 Msa1134180:intron 35.0%
ATTATGATGATACAAGGAGC+AGG - chr7_4:587496-587515 Msa1134180:CDS 35.0%
TCTACATAAATACTCAAGGG+GGG + chr7_4:587779-587798 None:intergenic 35.0%
GTCTACATAAATACTCAAGG+GGG + chr7_4:587780-587799 None:intergenic 35.0%
GATTATTAGAGTTGGCAACT+GGG + chr7_4:588161-588180 None:intergenic 35.0%
TGATTATTAGAGTTGGCAAC+TGG + chr7_4:588162-588181 None:intergenic 35.0%
AATTCCAGTGGTTTACTCAA+GGG + chr7_4:588257-588276 None:intergenic 35.0%
TAATTCCAGTGGTTTACTCA+AGG + chr7_4:588258-588277 None:intergenic 35.0%
AACATTATCCTTCAAGAGAG+AGG - chr7_4:588332-588351 Msa1134180:intron 35.0%
CATGACTACAGACTCTAAAT+GGG + chr7_4:588787-588806 None:intergenic 35.0%
ACATGACTACAGACTCTAAA+TGG + chr7_4:588788-588807 None:intergenic 35.0%
CAGAATAGGATTATGGCTTT+AGG - chr7_4:588845-588864 Msa1134180:intron 35.0%
TAAAGTTGAAGACCAATCAC+TGG - chr7_4:589014-589033 Msa1134180:intron 35.0%
GGTATGAACTTTCATACAAG+AGG - chr7_4:589300-589319 Msa1134180:intron 35.0%
TAGGATTATCACTTGCATGA+GGG + chr7_4:589421-589440 None:intergenic 35.0%
TCAACATTATCCCATTAAGC+GGG + chr7_4:589806-589825 None:intergenic 35.0%
! TTTGGCGAAATAGATTTGCT+CGG - chr7_4:589875-589894 Msa1134180:intron 35.0%
ATTGAAATTATTGGACCCAG+AGG + chr7_4:590011-590030 None:intergenic 35.0%
TGGGTCCAATAATTTCAATC+AGG - chr7_4:590012-590031 Msa1134180:intron 35.0%
ACGCTAAATCAAAAAAGGGT+GGG + chr7_4:590151-590170 None:intergenic 35.0%
CATAACTGTAACTAGTGTGT+GGG - chr7_4:590172-590191 Msa1134180:intron 35.0%
TTGAATGGTGAATCACCAAA+CGG + chr7_4:590422-590441 None:intergenic 35.0%
TTAAAACCATCTGATTGGGA+TGG + chr7_4:590503-590522 None:intergenic 35.0%
GGCATTAAAACCATCTGATT+GGG + chr7_4:590507-590526 None:intergenic 35.0%
! AATGCCGACATGTCTAATTT+TGG - chr7_4:590521-590540 Msa1134180:CDS 35.0%
! ATGCCGACATGTCTAATTTT+GGG - chr7_4:590522-590541 Msa1134180:CDS 35.0%
!!! GACATGTCTAATTTTGGGTT+TGG - chr7_4:590527-590546 Msa1134180:CDS 35.0%
!!! CATGTCTAATTTTGGGTTTG+GGG - chr7_4:590529-590548 Msa1134180:CDS 35.0%
GAATATCAGTTTCCGAATCT+TGG + chr7_4:590634-590653 None:intergenic 35.0%
TGGGTATATGATGAGCTAAA+GGG + chr7_4:591331-591350 None:intergenic 35.0%
ATGGGTATATGATGAGCTAA+AGG + chr7_4:591332-591351 None:intergenic 35.0%
ACTAATCCGTTAGCAGATAT+TGG - chr7_4:591613-591632 Msa1134180:intron 35.0%
TCAATGCCAATATCTGCTAA+CGG + chr7_4:591622-591641 None:intergenic 35.0%
CTTCGAATCCATTAATAGGA+AGG - chr7_4:591642-591661 Msa1134180:intron 35.0%
ACCTAATCCAAATTCGATGA+TGG - chr7_4:591774-591793 Msa1134180:intron 35.0%
CCTAATCCAAATTCGATGAT+GGG - chr7_4:591775-591794 Msa1134180:intron 35.0%
ATTATAGTTACCTGGCATGT+TGG + chr7_4:591968-591987 None:intergenic 35.0%
AATAATAACATGATGCGTCC+CGG - chr7_4:591985-592004 Msa1134180:intron 35.0%
! TGTTGATGTTGACTACTAGT+AGG + chr7_4:592140-592159 None:intergenic 35.0%
GAATAAACATACACCACACT+AGG + chr7_4:592214-592233 None:intergenic 35.0%
GGGATAGAATAACCTTACTT+GGG - chr7_4:592319-592338 Msa1134180:five_prime_UTR 35.0%
AGTAAGCAATAACCCAAGTA+AGG + chr7_4:592334-592353 None:intergenic 35.0%
!!! ATTTTTTGAACACCAACAGG+TGG - chr7_4:592369-592388 Msa1134180:five_prime_UTR 35.0%
GAACCTGATTCAGATCCAAA+CGG + chr7_4:584824-584843 None:intergenic 40.0%
TTGAGATGTGATGTGGTGTT+TGG - chr7_4:585088-585107 Msa1134180:CDS 40.0%
AGCTAACCATCAATCGAGAA+CGG - chr7_4:585541-585560 Msa1134180:intron 40.0%
!! AAGAAAGTGCTCAAAGTTCC+TGG - chr7_4:585927-585946 Msa1134180:CDS 40.0%
TTTACCTTCTGTTCAATGCC+AGG + chr7_4:585948-585967 None:intergenic 40.0%
ATGCTACTAGCAATGAACCA+TGG - chr7_4:586132-586151 Msa1134180:CDS 40.0%
TGCTACTAGCAATGAACCAT+GGG - chr7_4:586133-586152 Msa1134180:CDS 40.0%
ATCTGGTATTCATGACTGCA+GGG + chr7_4:586273-586292 None:intergenic 40.0%
AGACTACTGACATGATCATC+TGG + chr7_4:586290-586309 None:intergenic 40.0%
AGATGATCATGTCAGTAGTC+TGG - chr7_4:586289-586308 Msa1134180:CDS 40.0%
TGGAAACGAATTAACGACAC+TGG - chr7_4:586309-586328 Msa1134180:CDS 40.0%
TTAACGACACTGGCAAGAAT+TGG - chr7_4:586319-586338 Msa1134180:CDS 40.0%
ACTGCTCACTGTTCATTAAC+AGG - chr7_4:586466-586485 Msa1134180:CDS 40.0%
CTGTTAGTCAATTTCCACAC+AGG - chr7_4:586612-586631 Msa1134180:CDS 40.0%
ACGGTCATTTGATCGAAACT+AGG + chr7_4:586640-586659 None:intergenic 40.0%
! TTTTCCTTGATCTCTTCCAC+TGG + chr7_4:586740-586759 None:intergenic 40.0%
! TGGGTGTTGTGGCAAAATAA+AGG + chr7_4:587071-587090 None:intergenic 40.0%
TACCACCAGTTACAAGAGTT+GGG + chr7_4:587090-587109 None:intergenic 40.0%
ATACCACCAGTTACAAGAGT+TGG + chr7_4:587091-587110 None:intergenic 40.0%
TTGTAACTGGTGGTATGACA+TGG - chr7_4:587095-587114 Msa1134180:CDS 40.0%
TGGTGTATTATTGCGAAACC+TGG + chr7_4:587226-587245 None:intergenic 40.0%
AGGTTTCGCAATAATACACC+AGG - chr7_4:587225-587244 Msa1134180:intron 40.0%
TTTCGCAATAATACACCAGG+TGG - chr7_4:587228-587247 Msa1134180:intron 40.0%
GAGGAAGATAGAAATGGCTA+TGG - chr7_4:587327-587346 Msa1134180:intron 40.0%
ATTATGAGGAACGTTACGGT+AGG - chr7_4:587424-587443 Msa1134180:intron 40.0%
TTATGAGGAACGTTACGGTA+GGG - chr7_4:587425-587444 Msa1134180:intron 40.0%
ACGGTTACAGAGATGATGAT+AGG - chr7_4:587448-587467 Msa1134180:intron 40.0%
CGGTTACAGAGATGATGATA+GGG - chr7_4:587449-587468 Msa1134180:intron 40.0%
GGTTACAGAGATGATGATAG+GGG - chr7_4:587450-587469 Msa1134180:intron 40.0%
! GTAGACATCAGGATTTTCGA+TGG - chr7_4:587794-587813 Msa1134180:CDS 40.0%
CATAAAGTAAGGATGAGGCT+AGG + chr7_4:587890-587909 None:intergenic 40.0%
CCAAAGCAACAAATCTAAGC+AGG + chr7_4:588115-588134 None:intergenic 40.0%
!! CCTGCTTAGATTTGTTGCTT+TGG - chr7_4:588112-588131 Msa1134180:intron 40.0%
ATTCCAGTGGTTTACTCAAG+GGG + chr7_4:588256-588275 None:intergenic 40.0%
TTTACCTTGCTTCCAGTGAT+TGG + chr7_4:589029-589048 None:intergenic 40.0%
TGAACTTTCATACAAGAGGC+TGG - chr7_4:589304-589323 Msa1134180:intron 40.0%
TTGCAGGGATGTTGAAACTT+CGG - chr7_4:589370-589389 Msa1134180:intron 40.0%
AGGATTATCACTTGCATGAG+GGG + chr7_4:589420-589439 None:intergenic 40.0%
CTAGGATTATCACTTGCATG+AGG + chr7_4:589422-589441 None:intergenic 40.0%
TTTACAGGAGAAGATCCAGT+AGG + chr7_4:589458-589477 None:intergenic 40.0%
!! TAGTACTGCTGTTTCTACTC+AGG - chr7_4:589526-589545 Msa1134180:CDS 40.0%
GGGTCAAAGAAATCATCAGT+GGG + chr7_4:589560-589579 None:intergenic 40.0%
TGGGTCAAAGAAATCATCAG+TGG + chr7_4:589561-589580 None:intergenic 40.0%
CAACTTTACAGACCTGATGT+AGG + chr7_4:589590-589609 None:intergenic 40.0%
! TTGTATTTCCTTTGGGGAGT+TGG - chr7_4:589739-589758 Msa1134180:CDS 40.0%
! TTGTAATTTGCCCCGCTTAA+TGG - chr7_4:589792-589811 Msa1134180:CDS 40.0%
! TGTAATTTGCCCCGCTTAAT+GGG - chr7_4:589793-589812 Msa1134180:CDS 40.0%
CAACATTATCCCATTAAGCG+GGG + chr7_4:589805-589824 None:intergenic 40.0%
! GCTCCAACCACTTCTAATTT+TGG - chr7_4:589857-589876 Msa1134180:intron 40.0%
TCGCCAAAATTAGAAGTGGT+TGG + chr7_4:589863-589882 None:intergenic 40.0%
GTTGAAATTCCTGATGTAGC+GGG + chr7_4:589944-589963 None:intergenic 40.0%
GGTTGAAATTCCTGATGTAG+CGG + chr7_4:589945-589964 None:intergenic 40.0%
TTGAACCAGTGTTTGCTTCA+GGG + chr7_4:589967-589986 None:intergenic 40.0%
AAATTATTGGACCCAGAGGA+TGG + chr7_4:590007-590026 None:intergenic 40.0%
CGCTAAATCAAAAAAGGGTG+GGG + chr7_4:590150-590169 None:intergenic 40.0%
CACGCTAAATCAAAAAAGGG+TGG + chr7_4:590152-590171 None:intergenic 40.0%
GCATAACTGTAACTAGTGTG+TGG - chr7_4:590171-590190 Msa1134180:intron 40.0%
CTGTCACGAAATGTACCATA+TGG - chr7_4:590206-590225 Msa1134180:intron 40.0%
!! CAGTCTTTTGAAGATCCGTT+TGG - chr7_4:590404-590423 Msa1134180:intron 40.0%
! GTTTGGTGATTCACCATTCA+AGG - chr7_4:590421-590440 Msa1134180:intron 40.0%
!! ACAGAAGTATCAGCCTTGAA+TGG + chr7_4:590437-590456 None:intergenic 40.0%
CGGCATTAAAACCATCTGAT+TGG + chr7_4:590508-590527 None:intergenic 40.0%
CGAATCTTGGGACAAAAACT+GGG + chr7_4:590621-590640 None:intergenic 40.0%
! CCAGTTTTTGTCCCAAGATT+CGG - chr7_4:590619-590638 Msa1134180:intron 40.0%
TGTGATGTCATCTCAGGTAA+TGG + chr7_4:590680-590699 None:intergenic 40.0%
! AACAGTTCAGCTCCTACTTT+TGG - chr7_4:590704-590723 Msa1134180:intron 40.0%
TTGAAAAGGAAGGTGAAGGT+TGG + chr7_4:590730-590749 None:intergenic 40.0%
GAAGTTGAAAAGGAAGGTGA+AGG + chr7_4:590734-590753 None:intergenic 40.0%
CCAGATGAAGTTGAAAAGGA+AGG + chr7_4:590740-590759 None:intergenic 40.0%
! CCTTCCTTTTCAACTTCATC+TGG - chr7_4:590737-590756 Msa1134180:CDS 40.0%
TGGTCCAGATGAAGTTGAAA+AGG + chr7_4:590744-590763 None:intergenic 40.0%
! TGACCAGTTGGTTCAGAAAA+TGG + chr7_4:590764-590783 None:intergenic 40.0%
GGAAAATTGACCACTTGGAA+GGG + chr7_4:590837-590856 None:intergenic 40.0%
TGACCAGAATGAGAAGGAAA+GGG + chr7_4:590923-590942 None:intergenic 40.0%
TTGACCAGAATGAGAAGGAA+AGG + chr7_4:590924-590943 None:intergenic 40.0%
CAATCTACTGCACAAACAAG+CGG - chr7_4:591013-591032 Msa1134180:intron 40.0%
TGGAGTAAGAGATGTATCCA+GGG + chr7_4:591062-591081 None:intergenic 40.0%
!! GAATACATGTTTTGAGCTCC+TGG + chr7_4:591082-591101 None:intergenic 40.0%
! GGAAAGTTTGTGATTTGTGC+CGG + chr7_4:591214-591233 None:intergenic 40.0%
ATCACAAACTTTCCCCATCA+TGG - chr7_4:591220-591239 Msa1134180:intron 40.0%
AACTGTGATGCTTGATCAGT+TGG + chr7_4:591268-591287 None:intergenic 40.0%
TTCAACAACCAGAGCTTCTT+TGG - chr7_4:591286-591305 Msa1134180:intron 40.0%
AGAGCTTCTTTGGACAACAA+GGG - chr7_4:591296-591315 Msa1134180:intron 40.0%
! ATAGCATACGGTGAAGCATT+GGG + chr7_4:591367-591386 None:intergenic 40.0%
AATAGCATACGGTGAAGCAT+TGG + chr7_4:591368-591387 None:intergenic 40.0%
!! TTCACCGTATGCTATTTCAG+CGG - chr7_4:591372-591391 Msa1134180:five_prime_UTR 40.0%
GATGTTACAGGTGTGTTAGT+GGG + chr7_4:591685-591704 None:intergenic 40.0%
TGATGTTACAGGTGTGTTAG+TGG + chr7_4:591686-591705 None:intergenic 40.0%
CCCATCATCGAATTTGGATT+AGG + chr7_4:591778-591797 None:intergenic 40.0%
!! AGTAGGCACTGGTATTGATA+TGG + chr7_4:592123-592142 None:intergenic 40.0%
TTCTGTAAAGTGACCTAGTG+TGG - chr7_4:592198-592217 Msa1134180:intron 40.0%
CGGGATAGAATAACCTTACT+TGG - chr7_4:592318-592337 Msa1134180:five_prime_UTR 40.0%
CAGATCCAAACGGAACGAAT+TGG + chr7_4:584814-584833 None:intergenic 45.0%
GTTCCGTTTGGATCTGAATC+AGG - chr7_4:584818-584837 Msa1134180:three_prime_UTR 45.0%
! AGATAGCAGTTTGGGCCTTT+TGG - chr7_4:585671-585690 Msa1134180:CDS 45.0%
ACCAGCTGCTACAATGAAGA+AGG - chr7_4:585712-585731 Msa1134180:CDS 45.0%
ACCTTCTTCATTGTAGCAGC+TGG + chr7_4:585716-585735 None:intergenic 45.0%
! AGTTCCTGGCATTGAACAGA+AGG - chr7_4:585941-585960 Msa1134180:CDS 45.0%
TGATTTCTATCCCCTCTACC+AGG - chr7_4:586103-586122 Msa1134180:CDS 45.0%
AGCATCAAGAACCTGGTAGA+GGG + chr7_4:586117-586136 None:intergenic 45.0%
TAGCATCAAGAACCTGGTAG+AGG + chr7_4:586118-586137 None:intergenic 45.0%
TGCTAGTAGCATCAAGAACC+TGG + chr7_4:586124-586143 None:intergenic 45.0%
GCTACTAGCAATGAACCATG+GGG - chr7_4:586134-586153 Msa1134180:CDS 45.0%
CATCTGGTATTCATGACTGC+AGG + chr7_4:586274-586293 None:intergenic 45.0%
GACAGTACTTGAGTACTTGG+TGG - chr7_4:586493-586512 Msa1134180:CDS 45.0%
ATCGAAACTAGGTACCTGTG+TGG + chr7_4:586629-586648 None:intergenic 45.0%
GTCGGACAAAGTCTGTTCAT+AGG + chr7_4:586701-586720 None:intergenic 45.0%
GATTCCAGTGGAAGAGATCA+AGG - chr7_4:586733-586752 Msa1134180:intron 45.0%
AATCGTAGAGGTTAGGCAGA+AGG - chr7_4:586812-586831 Msa1134180:intron 45.0%
GCAGAAGGCTGCTGTTAATA+GGG - chr7_4:586827-586846 Msa1134180:intron 45.0%
! GTTACAAGAGTTGGGTGTTG+TGG + chr7_4:587082-587101 None:intergenic 45.0%
CAACACCCAACTCTTGTAAC+TGG - chr7_4:587082-587101 Msa1134180:CDS 45.0%
GGAAAAATTGTGGGTCTCGT+TGG - chr7_4:587116-587135 Msa1134180:CDS 45.0%
!! CACTCAAGCATTGGAAGCTA+TGG - chr7_4:587270-587289 Msa1134180:intron 45.0%
AAGAAGATCGTTATGCGAGC+AGG - chr7_4:587304-587323 Msa1134180:intron 45.0%
AGAAGATCGTTATGCGAGCA+GGG - chr7_4:587305-587324 Msa1134180:intron 45.0%
AGCAGGGAGGAAGATAGAAA+TGG - chr7_4:587321-587340 Msa1134180:intron 45.0%
!! TGGGCTCTAGAGATGATGAT+CGG - chr7_4:587370-587389 Msa1134180:intron 45.0%
AATCGCGATGGAGATCGTTA+TGG - chr7_4:587396-587415 Msa1134180:intron 45.0%
GATCGTGATTTCGATGACGA+TGG - chr7_4:587531-587550 Msa1134180:CDS 45.0%
CAACTGGGCAGTACATTCTT+TGG + chr7_4:588146-588165 None:intergenic 45.0%
TTCCAGTGGTTTACTCAAGG+GGG + chr7_4:588255-588274 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_4:588401-588420 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_4:588402-588421 None:intergenic 45.0%
AAGACCAATCACTGGAAGCA+AGG - chr7_4:589022-589041 Msa1134180:intron 45.0%
TACAAACGAGCAGACTTCAG+CGG - chr7_4:589198-589217 Msa1134180:intron 45.0%
TGCTCCTCCTAGTTATGAAG+AGG - chr7_4:589244-589263 Msa1134180:intron 45.0%
ACAGCCTCTTCATAACTAGG+AGG + chr7_4:589251-589270 None:intergenic 45.0%
CCAACAGCCTCTTCATAACT+AGG + chr7_4:589254-589273 None:intergenic 45.0%
CCTAGTTATGAAGAGGCTGT+TGG - chr7_4:589251-589270 Msa1134180:intron 45.0%
GTTCATACCTTTCAGGCACA+GGG + chr7_4:589289-589308 None:intergenic 45.0%
AGTTCATACCTTTCAGGCAC+AGG + chr7_4:589290-589309 None:intergenic 45.0%
!!! GAGGTTCGGTTTTGAACAAG+TGG + chr7_4:589332-589351 None:intergenic 45.0%
ACTAGCAGCAACAGATGTAC+TGG + chr7_4:589510-589529 None:intergenic 45.0%
GATGATTTCTTTGACCCACG+TGG - chr7_4:589563-589582 Msa1134180:CDS 45.0%
TGAACCAGTGTTTGCTTCAG+GGG + chr7_4:589966-589985 None:intergenic 45.0%
GTTGAACCAGTGTTTGCTTC+AGG + chr7_4:589968-589987 None:intergenic 45.0%
ATCAAAAAAGGGTGGGGACA+AGG + chr7_4:590144-590163 None:intergenic 45.0%
AACTGTAACTAGTGTGTGGG+TGG - chr7_4:590175-590194 Msa1134180:intron 45.0%
ACTGTAACTAGTGTGTGGGT+GGG - chr7_4:590176-590195 Msa1134180:intron 45.0%
! ACTCAGTTTGTTCAACGACC+AGG + chr7_4:590244-590263 None:intergenic 45.0%
GGTCGTTGAACAAACTGAGT+AGG - chr7_4:590244-590263 Msa1134180:CDS 45.0%
ACTGAACCATCCCAATCAGA+TGG - chr7_4:590494-590513 Msa1134180:intron 45.0%
! GAGAAAGGTTGAGTGTCACT+GGG + chr7_4:590590-590609 None:intergenic 45.0%
AGAGAAAGGTTGAGTGTCAC+TGG + chr7_4:590591-590610 None:intergenic 45.0%
AACTGGGAGTTAGCAGAGAA+AGG + chr7_4:590605-590624 None:intergenic 45.0%
CCGAATCTTGGGACAAAAAC+TGG + chr7_4:590622-590641 None:intergenic 45.0%
TTCTGCTGTGATGTCATCTC+AGG + chr7_4:590686-590705 None:intergenic 45.0%
! GGACCATTTTCTGAACCAAC+TGG - chr7_4:590758-590777 Msa1134180:CDS 45.0%
! TGAGGAGTAAGTTGACCAGT+TGG + chr7_4:590776-590795 None:intergenic 45.0%
GGTCAACTTACTCCTCATCA+AGG - chr7_4:590779-590798 Msa1134180:CDS 45.0%
!! AAGGGTTTGTGCAGGTTGAT+TGG + chr7_4:590819-590838 None:intergenic 45.0%
GGGAAAATTGACCACTTGGA+AGG + chr7_4:590838-590857 None:intergenic 45.0%
GAACTAGAAGCTGAAAAGCC+TGG + chr7_4:590863-590882 None:intergenic 45.0%
CAACCCTTTCCTTCTCATTC+TGG - chr7_4:590917-590936 Msa1134180:CDS 45.0%
CAAAAGGTGGCTGCATAGAA+TGG + chr7_4:590979-590998 None:intergenic 45.0%
CAAACAAGCGGTCATACCTA+CGG - chr7_4:591025-591044 Msa1134180:intron 45.0%
CTGGAGTAAGAGATGTATCC+AGG + chr7_4:591063-591082 None:intergenic 45.0%
CTGGATACATCTCTTACTCC+AGG - chr7_4:591061-591080 Msa1134180:intron 45.0%
TTGTGAAGGAAAGCCTGTTG+AGG + chr7_4:591164-591183 None:intergenic 45.0%
ACAAACTTTCCCCATCATGG+AGG - chr7_4:591223-591242 Msa1134180:intron 45.0%
AGCAGTAGATCCTCCATGAT+GGG + chr7_4:591236-591255 None:intergenic 45.0%
AAGCAGTAGATCCTCCATGA+TGG + chr7_4:591237-591256 None:intergenic 45.0%
GATGCTTGATCAGTTGGAGA+GGG + chr7_4:591262-591281 None:intergenic 45.0%
TGATGCTTGATCAGTTGGAG+AGG + chr7_4:591263-591282 None:intergenic 45.0%
! CTTGTTGTCCAAAGAAGCTC+TGG + chr7_4:591297-591316 None:intergenic 45.0%
CAGAGCTTCTTTGGACAACA+AGG - chr7_4:591295-591314 Msa1134180:intron 45.0%
TTTGGGCAGACACATTAAGC+AGG - chr7_4:591452-591471 Msa1134180:intron 45.0%
TTGGGCAGACACATTAAGCA+GGG - chr7_4:591453-591472 Msa1134180:intron 45.0%
ATGGGTAAAGCTATGGGATC+AGG - chr7_4:591715-591734 Msa1134180:intron 45.0%
AAAGCTATGGGATCAGGTTC+AGG - chr7_4:591721-591740 Msa1134180:intron 45.0%
CCAGAACCCATCATCGAATT+TGG + chr7_4:591784-591803 None:intergenic 45.0%
!! CCAAATTCGATGATGGGTTC+TGG - chr7_4:591781-591800 Msa1134180:intron 45.0%
!! TTCGATGATGGGTTCTGGTA+TGG - chr7_4:591786-591805 Msa1134180:intron 45.0%
!! TCGATGATGGGTTCTGGTAT+GGG - chr7_4:591787-591806 Msa1134180:intron 45.0%
ACATCCATGGGTATGGGTAT+GGG - chr7_4:591874-591893 Msa1134180:intron 45.0%
TACCAGATGCAACCTCCTAA+TGG - chr7_4:591928-591947 Msa1134180:intron 45.0%
TTCCATTAGGAGGTTGCATC+TGG + chr7_4:591933-591952 None:intergenic 45.0%
GGTTATGCTCAACAGCCATA+TGG - chr7_4:592009-592028 Msa1134180:intron 45.0%
TATGCTCAACAGCCATATGG+TGG - chr7_4:592012-592031 Msa1134180:intron 45.0%
TCTCATCGGTATCCACCATA+TGG + chr7_4:592027-592046 None:intergenic 45.0%
! TGTTGACTACTAGTAGGCAC+TGG + chr7_4:592134-592153 None:intergenic 45.0%
!!! TTTTGGGGTCACCCTTCTTT+AGG - chr7_4:592263-592282 Msa1134180:five_prime_UTR 45.0%
! TTTGGGGTCACCCTTCTTTA+GGG - chr7_4:592264-592283 Msa1134180:five_prime_UTR 45.0%
! GCTCAAAGCACCCTAAAGAA+GGG + chr7_4:592277-592296 None:intergenic 45.0%
! TGCTCAAAGCACCCTAAAGA+AGG + chr7_4:592278-592297 None:intergenic 45.0%
AGGTTATTCTATCCCGTCAC+TGG + chr7_4:592314-592333 None:intergenic 45.0%
!! AATAATTAATTATCAATTAA+TGG + chr7_4:585773-585792 None:intergenic 5.0%
AACGGAACGAATTGGTGCGT+CGG + chr7_4:584806-584825 None:intergenic 50.0%
ACGCACCAATTCGTTCCGTT+TGG - chr7_4:584806-584825 Msa1134180:three_prime_UTR 50.0%
! CAAGCACCGTTCTCGATTGA+TGG + chr7_4:585550-585569 None:intergenic 50.0%
GCATCAAGAACCTGGTAGAG+GGG + chr7_4:586116-586135 None:intergenic 50.0%
AATGAACCATGGGGTCCTCA+TGG - chr7_4:586143-586162 Msa1134180:CDS 50.0%
TCTGCAAGCAGTGTTCCATG+AGG + chr7_4:586161-586180 None:intergenic 50.0%
ACTGCTTGCAGACATTGCTC+AGG - chr7_4:586169-586188 Msa1134180:CDS 50.0%
ACGACACTGGCAAGAATTGG+CGG - chr7_4:586322-586341 Msa1134180:CDS 50.0%
GAATTGGCGGCATGTCTACA+AGG - chr7_4:586335-586354 Msa1134180:CDS 50.0%
! CTTGAGTACTTGGTGGCTCA+TGG - chr7_4:586500-586519 Msa1134180:CDS 50.0%
GGCAGAAGGCTGCTGTTAAT+AGG - chr7_4:586826-586845 Msa1134180:intron 50.0%
CACCCAACTCTTGTAACTGG+TGG - chr7_4:587085-587104 Msa1134180:CDS 50.0%
CCAGGTCTATACATTCCACC+TGG + chr7_4:587246-587265 None:intergenic 50.0%
CCAGGTGGAATGTATAGACC+TGG - chr7_4:587243-587262 Msa1134180:intron 50.0%
CCAATGCTTGAGTGTGAACC+AGG + chr7_4:587264-587283 None:intergenic 50.0%
CCTGGTTCACACTCAAGCAT+TGG - chr7_4:587261-587280 Msa1134180:intron 50.0%
GATGATCGGTACAATCGCGA+TGG - chr7_4:587384-587403 Msa1134180:intron 50.0%
GCTTGGCTAGGAAGATCACA+AGG - chr7_4:587648-587667 Msa1134180:CDS 50.0%
! GTCTGCACTGCACTGAGTTT+TGG - chr7_4:587685-587704 Msa1134180:intron 50.0%
GTAAGGATGAGGCTAGGATC+CGG + chr7_4:587884-587903 None:intergenic 50.0%
TCCAGTGGTTTACTCAAGGG+GGG + chr7_4:588254-588273 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_4:588397-588416 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_4:588403-588422 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_4:588400-588419 Msa1134180:intron 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG - chr7_4:588407-588426 Msa1134180:intron 50.0%
ATCCAGTAGGAGCAGAGGTT+AGG + chr7_4:589445-589464 None:intergenic 50.0%
AGAAGATCCAGTAGGAGCAG+AGG + chr7_4:589450-589469 None:intergenic 50.0%
GCAGCAGCAGTTACTTCAGT+TGG + chr7_4:589488-589507 None:intergenic 50.0%
! TCCTTTGGGGAGTTGGATCT+TGG - chr7_4:589746-589765 Msa1134180:CDS 50.0%
GGATCTTGGCACTTGGTTGT+TGG - chr7_4:589760-589779 Msa1134180:CDS 50.0%
TTAGAAGTGGTTGGAGCAGC+TGG + chr7_4:589854-589873 None:intergenic 50.0%
TCAACCCCTGAAGCAAACAC+TGG - chr7_4:589959-589978 Msa1134180:intron 50.0%
! TCTTTTGCAGCACCATCCTC+TGG - chr7_4:589992-590011 Msa1134180:intron 50.0%
! CTTTTGCAGCACCATCCTCT+GGG - chr7_4:589993-590012 Msa1134180:intron 50.0%
! TGAGGTGCATGGTGTTGAGA+TGG + chr7_4:590470-590489 None:intergenic 50.0%
! GTTCAGTAGTCTGAGGTGCA+TGG + chr7_4:590481-590500 None:intergenic 50.0%
TGGGATGGTTCAGTAGTCTG+AGG + chr7_4:590488-590507 None:intergenic 50.0%
! ATCTCAGGTAATGGTGCAGG+AGG + chr7_4:590671-590690 None:intergenic 50.0%
! GTCATCTCAGGTAATGGTGC+AGG + chr7_4:590674-590693 None:intergenic 50.0%
! GGTGAAGGTTGGCCAAAAGT+AGG + chr7_4:590719-590738 None:intergenic 50.0%
GCAGCTGAGAAACCTTGATG+AGG + chr7_4:590794-590813 None:intergenic 50.0%
GGCTGGGAAAATTGACCACT+TGG + chr7_4:590842-590861 None:intergenic 50.0%
! AGTGGTCAATTTTCCCAGCC+AGG - chr7_4:590842-590861 Msa1134180:intron 50.0%
AGAAGCTGAAAAGCCTGGCT+GGG + chr7_4:590858-590877 None:intergenic 50.0%
TAGAAGCTGAAAAGCCTGGC+TGG + chr7_4:590859-590878 None:intergenic 50.0%
!! CTGTGCATATGGACTGGTAG+AGG + chr7_4:590897-590916 None:intergenic 50.0%
GGAAAGGGTTGCTGTGCATA+TGG + chr7_4:590908-590927 None:intergenic 50.0%
! CCAGGTTGACCAGAATGAGA+AGG + chr7_4:590929-590948 None:intergenic 50.0%
CCTTCTCATTCTGGTCAACC+TGG - chr7_4:590926-590945 Msa1134180:CDS 50.0%
! CAGCCACCTTTTGCTTCTCA+AGG - chr7_4:590986-591005 Msa1134180:intron 50.0%
! CCACCTTTTGCTTCTCAAGG+CGG - chr7_4:590989-591008 Msa1134180:intron 50.0%
TGACCGCCTTGAGAAGCAAA+AGG + chr7_4:590995-591014 None:intergenic 50.0%
AGTGGGAACTACTTGCCACA+GGG - chr7_4:591136-591155 Msa1134180:CDS 50.0%
GCTTGGGGAGTCATTTGTGA+AGG + chr7_4:591178-591197 None:intergenic 50.0%
!! ATTTGTGCCGGTTGTGCTGT+TGG + chr7_4:591202-591221 None:intergenic 50.0%
GCAGTAGATCCTCCATGATG+GGG + chr7_4:591235-591254 None:intergenic 50.0%
ATTGGGAGCAGGCACTTGAT+GGG + chr7_4:591350-591369 None:intergenic 50.0%
!! GGTGCCGCTGAAATAGCATA+CGG + chr7_4:591379-591398 None:intergenic 50.0%
TGGGCAGACACATTAAGCAG+GGG - chr7_4:591454-591473 Msa1134180:intron 50.0%
AGACACATTAAGCAGGGGAC+TGG - chr7_4:591459-591478 Msa1134180:intron 50.0%
ATGGGATCAGGTTCAGGCAT+AGG - chr7_4:591727-591746 Msa1134180:intron 50.0%
! ATGGGTTCTGGTATGGGCAT+GGG - chr7_4:591793-591812 Msa1134180:intron 50.0%
TTCTGGTATGGGCATGGGTA+TGG - chr7_4:591798-591817 Msa1134180:intron 50.0%
TCTGGTATGGGCATGGGTAT+GGG - chr7_4:591799-591818 Msa1134180:intron 50.0%
TATGGGCATGGGTATGGGAA+TGG - chr7_4:591804-591823 Msa1134180:intron 50.0%
ATGGGCATGGGTATGGGAAT+GGG - chr7_4:591805-591824 Msa1134180:intron 50.0%
GGTATGGGTATGGGAGGTTA+CGG - chr7_4:591841-591860 Msa1134180:intron 50.0%
AGGCATGACATCCATGGGTA+TGG - chr7_4:591867-591886 Msa1134180:intron 50.0%
GGCATGACATCCATGGGTAT+GGG - chr7_4:591868-591887 Msa1134180:intron 50.0%
GACATCCATGGGTATGGGTA+TGG - chr7_4:591873-591892 Msa1134180:intron 50.0%
GGTATGGGTATGGGTGGTAT+GGG - chr7_4:591883-591902 Msa1134180:intron 50.0%
GTATGGGTATGGGTGGTATG+GGG - chr7_4:591884-591903 Msa1134180:intron 50.0%
TATGGGTATGGGTGGTATGG+GGG - chr7_4:591885-591904 Msa1134180:intron 50.0%
!! GAACCAGGAGGCATTCCATT+AGG + chr7_4:591946-591965 None:intergenic 50.0%
TTACCTGGCATGTTGGAACC+AGG + chr7_4:591961-591980 None:intergenic 50.0%
AATAACATGATGCGTCCCGG+TGG - chr7_4:591988-592007 Msa1134180:intron 50.0%
TGGCTGTTGAGCATAACCAC+CGG + chr7_4:592007-592026 None:intergenic 50.0%
TCAGCGTTGTGTACCAGTGA+CGG - chr7_4:592298-592317 Msa1134180:five_prime_UTR 50.0%
!! CAGTTTGGGCCTTTTGGTGC+TGG - chr7_4:585677-585696 Msa1134180:CDS 55.0%
AGTGTTCCATGAGGACCCCA+TGG + chr7_4:586152-586171 None:intergenic 55.0%
AGATCGTTATGCGAGCAGGG+AGG - chr7_4:587308-587327 Msa1134180:intron 55.0%
GAGGAACGTTACGGTAGGGA+CGG - chr7_4:587429-587448 Msa1134180:intron 55.0%
ACGATGGCCAACACTCGTCT+CGG - chr7_4:587547-587566 Msa1134180:CDS 55.0%
GGCTTTACCGAGACGAGTGT+TGG + chr7_4:587557-587576 None:intergenic 55.0%
TTACCTCCGCCTCCACAGAT+AGG - chr7_4:588228-588247 Msa1134180:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_4:588395-588414 Msa1134180:intron 55.0%
TCGGCAGAATCTGCTCCAAG+AGG - chr7_4:589389-589408 Msa1134180:intron 55.0%
GTAGGAGCAGAGGTTAGGCT+AGG + chr7_4:589440-589459 None:intergenic 55.0%
AGCCTAACCTCTGCTCCTAC+TGG - chr7_4:589440-589459 Msa1134180:intron 55.0%
GACCTGATGTAGGACCACGT+GGG + chr7_4:589580-589599 None:intergenic 55.0%
AGACCTGATGTAGGACCACG+TGG + chr7_4:589581-589600 None:intergenic 55.0%
GCCAAGATCCAACTCCCCAA+AGG + chr7_4:589750-589769 None:intergenic 55.0%
GGGAGTTGGATCTTGGCACT+TGG - chr7_4:589753-589772 Msa1134180:CDS 55.0%
CTGGGAGCAGATGCAGAGTA+TGG + chr7_4:590572-590591 None:intergenic 55.0%
CCACTTGGAAGGGTTTGTGC+AGG + chr7_4:590827-590846 None:intergenic 55.0%
CCTGCACAAACCCTTCCAAG+TGG - chr7_4:590824-590843 Msa1134180:intron 55.0%
GGGTTGCTGTGCATATGGAC+TGG + chr7_4:590903-590922 None:intergenic 55.0%
CCAGTAGATGACGAGAACCC+AGG + chr7_4:590956-590975 None:intergenic 55.0%
CCTGGGTTCTCGTCATCTAC+TGG - chr7_4:590953-590972 Msa1134180:intron 55.0%
CCGCCTTGAGAAGCAAAAGG+TGG + chr7_4:590992-591011 None:intergenic 55.0%
ACAAGCGGTCATACCTACGG+TGG - chr7_4:591028-591047 Msa1134180:intron 55.0%
! CAGGGAGTACAATCCACCGT+AGG + chr7_4:591044-591063 None:intergenic 55.0%
!! CTACGGTGGATTGTACTCCC+TGG - chr7_4:591042-591061 Msa1134180:intron 55.0%
CAGTGGGAACTACTTGCCAC+AGG - chr7_4:591135-591154 Msa1134180:CDS 55.0%
TTGCCACAGGGATCCTCAAC+AGG - chr7_4:591148-591167 Msa1134180:intron 55.0%
AAGCCTGTTGAGGATCCCTG+TGG + chr7_4:591154-591173 None:intergenic 55.0%
! GGTTGTGCTGTTGGAGCTTG+GGG + chr7_4:591193-591212 None:intergenic 55.0%
! CGGTTGTGCTGTTGGAGCTT+GGG + chr7_4:591194-591213 None:intergenic 55.0%
CCAAGCTCCAACAGCACAAC+CGG - chr7_4:591192-591211 Msa1134180:intron 55.0%
CATTGGGAGCAGGCACTTGA+TGG + chr7_4:591351-591370 None:intergenic 55.0%
!! TACGGTGAAGCATTGGGAGC+AGG + chr7_4:591361-591380 None:intergenic 55.0%
! GATGGGTTCTGGTATGGGCA+TGG - chr7_4:591792-591811 Msa1134180:intron 55.0%
ATGGGAATGGGCAATGCTCC+CGG - chr7_4:591817-591836 Msa1134180:intron 55.0%
ACCTCCCATACCCATACCAC+CGG + chr7_4:591839-591858 None:intergenic 55.0%
ATGGGTATGGGAGGTTACGG+AGG - chr7_4:591844-591863 Msa1134180:intron 55.0%
! GGAGGAGGCATGACATCCAT+GGG - chr7_4:591862-591881 Msa1134180:intron 55.0%
TCCATGGGTATGGGTATGGG+TGG - chr7_4:591877-591896 Msa1134180:intron 55.0%
ACCACCCATACCCATACCCA+TGG + chr7_4:591881-591900 None:intergenic 55.0%
GGGTATGGGTATGGGTGGTA+TGG - chr7_4:591882-591901 Msa1134180:intron 55.0%
ATGGGTATGGGTGGTATGGG+GGG - chr7_4:591886-591905 Msa1134180:intron 55.0%
!! CCAGGAGGCATTCCATTAGG+AGG + chr7_4:591943-591962 None:intergenic 55.0%
CCTCCTAATGGAATGCCTCC+TGG - chr7_4:591940-591959 Msa1134180:intron 55.0%
GGCTGTTGAGCATAACCACC+GGG + chr7_4:592006-592025 None:intergenic 55.0%
CAGCGTTGTGTACCAGTGAC+GGG - chr7_4:592299-592318 Msa1134180:five_prime_UTR 55.0%
CAGCACGAGCCAGCACCAAA+AGG + chr7_4:585689-585708 None:intergenic 60.0%
ACTCAAGGGGGGCCTATCTG+TGG + chr7_4:588243-588262 None:intergenic 60.0%
GCCCCCCTTGAGTAAACCAC+TGG - chr7_4:588250-588269 Msa1134180:intron 60.0%
TGGATGCCGACCCCACTTAG+TGG - chr7_4:588388-588407 Msa1134180:intron 60.0%
GGATGCCGACCCCACTTAGT+GGG - chr7_4:588389-588408 Msa1134180:intron 60.0%
CTCAGAGCCCTGTGCCTGAA+AGG - chr7_4:589279-589298 Msa1134180:intron 60.0%
GACCCACGTGGTCCTACATC+AGG - chr7_4:589575-589594 Msa1134180:CDS 60.0%
!! CCTGATGTAGCGGGCACAAG+AGG + chr7_4:589935-589954 None:intergenic 60.0%
CCTCTTGTGCCCGCTACATC+AGG - chr7_4:589932-589951 Msa1134180:intron 60.0%
TCTGGTCAACCTGGCATGCC+TGG - chr7_4:590935-590954 Msa1134180:intron 60.0%
CTGGTCAACCTGGCATGCCT+GGG - chr7_4:590936-590955 Msa1134180:intron 60.0%
! CCGGTTGTGCTGTTGGAGCT+TGG + chr7_4:591195-591214 None:intergenic 60.0%
GGTTCAGGCATAGGTCGTGC+TGG - chr7_4:591736-591755 Msa1134180:intron 60.0%
GGCAATGCTCCCGGTGGTAT+GGG - chr7_4:591826-591845 Msa1134180:intron 60.0%
TGCTCCCGGTGGTATGGGTA+TGG - chr7_4:591831-591850 Msa1134180:intron 60.0%
GCTCCCGGTGGTATGGGTAT+GGG - chr7_4:591832-591851 Msa1134180:intron 60.0%
CCTCCCATACCCATACCACC+GGG + chr7_4:591838-591857 None:intergenic 60.0%
GGTATGGGAGGTTACGGAGG+AGG - chr7_4:591847-591866 Msa1134180:intron 60.0%
! CGGAGGAGGCATGACATCCA+TGG - chr7_4:591861-591880 Msa1134180:intron 60.0%
TGGGTATGGGTGGTATGGGG+GGG - chr7_4:591887-591906 Msa1134180:intron 60.0%
ATGGGTGGTATGGGGGGGAT+AGG - chr7_4:591892-591911 Msa1134180:intron 60.0%
TGGTATGGGGGGGATAGGCA+TGG - chr7_4:591897-591916 Msa1134180:intron 60.0%
GGTATGGGGGGGATAGGCAT+GGG - chr7_4:591898-591917 Msa1134180:intron 60.0%
GTATGGGGGGGATAGGCATG+GGG - chr7_4:591899-591918 Msa1134180:intron 60.0%
CCTGGCATGTTGGAACCAGG+AGG + chr7_4:591958-591977 None:intergenic 60.0%
CCTCCTGGTTCCAACATGCC+AGG - chr7_4:591955-591974 Msa1134180:intron 60.0%
CAAGGGGGGCCTATCTGTGG+AGG + chr7_4:588240-588259 None:intergenic 65.0%
GCATGAGGGGACGAGCCTCT+TGG + chr7_4:589407-589426 None:intergenic 65.0%
GACGAGAACCCAGGCATGCC+AGG + chr7_4:590947-590966 None:intergenic 65.0%
! GGCATAGGTCGTGCTGGTGC+TGG - chr7_4:591742-591761 Msa1134180:intron 65.0%
GGAATGGGCAATGCTCCCGG+TGG - chr7_4:591820-591839 Msa1134180:intron 65.0%
GGGCAATGCTCCCGGTGGTA+TGG - chr7_4:591825-591844 Msa1134180:intron 65.0%
CCCGGTGGTATGGGTATGGG+AGG - chr7_4:591835-591854 Msa1134180:intron 65.0%
GGGCCTATCTGTGGAGGCGG+AGG + chr7_4:588234-588253 None:intergenic 70.0%
GGGGGGCCTATCTGTGGAGG+CGG + chr7_4:588237-588256 None:intergenic 70.0%
GGGGGGATAGGCATGGGGCA+AGG - chr7_4:591904-591923 Msa1134180:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 584652 592425 584652 ID=Msa1134180;Name=Msa1134180
chr7_4 mRNA 584652 592425 584652 ID=Msa1134180-mRNA-1;Parent=Msa1134180;Name=Msa1134180-mRNA-1;_AED=0.07;_eAED=0.07;_QI=240|0.92|0.92|1|0.92|0.85|14|381|949
chr7_4 exon 584652 585469 584652 ID=Msa1134180-mRNA-1:exon:260;Parent=Msa1134180-mRNA-1
chr7_4 exon 585575 586670 585575 ID=Msa1134180-mRNA-1:exon:259;Parent=Msa1134180-mRNA-1
chr7_4 exon 587044 587222 587044 ID=Msa1134180-mRNA-1:exon:258;Parent=Msa1134180-mRNA-1
chr7_4 exon 587481 587701 587481 ID=Msa1134180-mRNA-1:exon:257;Parent=Msa1134180-mRNA-1
chr7_4 exon 587777 587866 587777 ID=Msa1134180-mRNA-1:exon:256;Parent=Msa1134180-mRNA-1
chr7_4 exon 588034 588075 588034 ID=Msa1134180-mRNA-1:exon:255;Parent=Msa1134180-mRNA-1
chr7_4 exon 589509 589850 589509 ID=Msa1134180-mRNA-1:exon:254;Parent=Msa1134180-mRNA-1
chr7_4 exon 590224 590336 590224 ID=Msa1134180-mRNA-1:exon:253;Parent=Msa1134180-mRNA-1
chr7_4 exon 590506 590589 590506 ID=Msa1134180-mRNA-1:exon:252;Parent=Msa1134180-mRNA-1
chr7_4 exon 590721 590799 590721 ID=Msa1134180-mRNA-1:exon:251;Parent=Msa1134180-mRNA-1
chr7_4 exon 590873 590952 590873 ID=Msa1134180-mRNA-1:exon:250;Parent=Msa1134180-mRNA-1
chr7_4 exon 591115 591166 591115 ID=Msa1134180-mRNA-1:exon:249;Parent=Msa1134180-mRNA-1
chr7_4 exon 591318 591404 591318 ID=Msa1134180-mRNA-1:exon:248;Parent=Msa1134180-mRNA-1
chr7_4 exon 592238 592425 592238 ID=Msa1134180-mRNA-1:exon:247;Parent=Msa1134180-mRNA-1
chr7_4 five_prime_UTR 592238 592425 592238 ID=Msa1134180-mRNA-1:five_prime_utr;Parent=Msa1134180-mRNA-1
chr7_4 five_prime_UTR 591353 591404 591353 ID=Msa1134180-mRNA-1:five_prime_utr;Parent=Msa1134180-mRNA-1
chr7_4 CDS 591318 591352 591318 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 591115 591166 591115 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 590873 590952 590873 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 590721 590799 590721 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 590506 590589 590506 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 590224 590336 590224 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 589509 589850 589509 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 588034 588075 588034 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 587777 587866 587777 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 587481 587701 587481 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 587044 587222 587044 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 585575 586670 585575 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 CDS 585033 585469 585033 ID=Msa1134180-mRNA-1:cds;Parent=Msa1134180-mRNA-1
chr7_4 three_prime_UTR 584652 585032 584652 ID=Msa1134180-mRNA-1:three_prime_utr;Parent=Msa1134180-mRNA-1
Gene Sequence

>Msa1134180

ATGAAGAAGGTTTTTGGTCAAACTGTTAGGGACCTTAAAAGAGAAGTGAACAAGAAAGTGCTCAAAGTTCCTGGCATTGAACAGAAGGTTCTTGATGCTACTAGCAATGAACCATGGGGTCCTCATGGAACACTGCTTGCAGACATTGCTCAGGCAACTAGAAACCCTCATGAATACCAGATGATCATGTCAGTAGTCTGGAAACGAATTAACGACACTGGCAAGAATTGGCGGCATGTCTACAAGGCTTTGACAGTACTTGAGTACTTGGTGGCTCATGGTTCTGAGAGAGTCATAGATGAGATCAAAGAACATTCTTATCAAATATCGTGGAAGAGATCAAGGAAAAATGTTAGGAAAAAATCTCAGAATCTCGTTGTCCTTGTGAATGATAAAGAAAGAATCGTAGAGGTTAGGCAGAAGGCTGCTGTTAATAGGGAAAAGTTTCGCAATAATACACCAGGTGGAATGTATAGACCTGGTTCACACTCAAGCATTGGAAGCTATGGTGATCGATATGAAGAAGATCGTTATGCGAGCAGGGAGGAAGATAGAAATGGCTATGGTTATGGAAGAGAAAGAGAAATGGGCTCTAGAGATGATGATCGGTACAATCGCGATGGAGATCGTTATGGTAGAGATTATGAGGAACGTTACGGTAGGGACGGTTACAGAGATGATGATAGGGGAAGAAGTCGAAGTGTTGACTACAATTATGATGATACAAGGAGCAGGAATTCTGATAGAGATCGTGATTTCGATGACGATGGCCAACACTCGTCTCGAGGTAGCAATGCTAAAGTTGAAGACCAATCACTGGAAGCAAGACTTCAGCGGAAACTTTCTGAGCAAAATTCGGGTGCTCCTCCTAGTTATGAAGAGGCTGTTGGTGAAGCTCAGAGCCCTGTGCCTGAAAGGGATGTTGAAACTTCGGCAGAATCTGCTCCAAGAGGCTCGTCCCCTCATGCAAGTGATAATCCTAGCCTAACCTCTGCTCCTACTGGATCTTCTCCTGTAAACAATAATCCAACTGAAGTAACTGCTGCTGCCAGTACATCTGTTGCTGCTAGTACTGCTGTTTCTACTCAGGAAACTGAGCCCACTGATGATTTCTTTGACCCACGTGGTCCTACATCAGCTGCTCCAACCACTTCTAATTTTGGCGAAATAGATTTGCTCGGTTCTTTATCAGACTCATTCTCTTCAAATGCTCTGCCTCTTGTGCCCGCTACATCAGGAATTTCAACCCCTGAAGCAAACACTGGTTCAACAGCTTCTTTTGCAGCACCATCCTCTGGGTCCAATAATTTCAATCAGTCTTTTGAAGATCCGTTTGGTGATTCACCATTCAAGGCTGATACTTCTGTTGAAACTGCTCCATCTCAACACCATGCACCTCAGACTACTGAACCATCCCAATCAGATGGTTTTAATGCCGACATGTCTAATTTTGGGTTTGGGGACTCATTTTCTATTGTACCATACTCTGCATCTGCTCCCAGTGACACTCAACCTTTCTCTGCTAACTCCCAGTTTTTGTCCCAAGATTCGGAAACTGATATTCTAGCTGACATTCTTCCTCCTGCACCATTACCTGAGATGACATCACAGCAGAACAGTTCAGCTCCTACTTTTGGCCAACCTTCACCTTCCTTTTCAACTTCATCTGGACCATTTTCTGAACCAACTGGTCAACTTACTCCTCATCAAGGTTTCTCAGCTGCAACCAATCAACCTGCACAAACCCTTCCAAGTGGTCAATTTTCCCAGCCAGGCTTTTCAGCTTCTAGTTCATCTTTTTCAGCCTCTACCAGTCCATATGCACAGCAACCCTTTCCTTCTCATTCTGGTCAACCTGGCATGCCTGGGTTCTCGTCATCTACTGGCCATTCTATGCAGCCACCTTTTGCTTCTCAAGGCGGTCAATCTACTGCACAAACAAGCGGTCATACCTACGGTGGATTGTACTCCCTGGATACATCTCTTACTCCAGGAGCTCAAAACATGTATTCTCAATCACAAAATGGATATAATGGATCTATGAACAGTGGGAACTACTTGCCACAGGGATCCTCAACAGGCTTTCCTTCACAAATGACTCCCCAAGCTCCAACAGCACAACCGGCACAAATCACAAACTTTCCCCATCATGGAGGATCTACTGCTTCTCCCTCTCCAACTGATCAAGCATCACAGTTCAACAACCAGAGCTTCTTTGGACAACAAGGGAATGCAGCTCCCTTTAGCTCATCATATACCCATCAAGTGCCTGCTCCCAATGCTTCACCGTATGCTATTTCAGCGGCACCAAATTCTTTAGTTTCTCAACCATCCAAAGATAAGTTTGAAACAAAATCAACAGTTTGGGCAGACACATTAAGCAGGGGACTGGTTAATTTAAACATATCTGGACCTAAAACTAATCCGTTAGCAGATATTGGCATTGACTTCGAATCCATTAATAGGAAGGAAAAGAGAATGGAGAAGCCCACTAACACACCTGTAACATCAACTGTAAATATGGGTAAAGCTATGGGATCAGGTTCAGGCATAGGTCGTGCTGGTGCTGGTGCTCTTAGACCTAATCCAAATTCGATGATGGGTTCTGGTATGGGCATGGGTATGGGAATGGGCAATGCTCCCGGTGGTATGGGTATGGGAGGTTACGGAGGAGGCATGACATCCATGGGTATGGGTATGGGTGGTATGGGGGGGATAGGCATGGGGCAAGGATACCAGATGCAACCTCCTAATGGAATGCCTCCTGGTTCCAACATGCCAGGTAACTATAATAATAACATGATGCGTCCCGGTGGTTATGCTCAACAGCCATATGGTGGATACCGATGA
Protein sequence

>Msa1134180

MKKVFGQTVRDLKREVNKKVLKVPGIEQKVLDATSNEPWGPHGTLLADIAQATRNPHEYQMIMSVVWKRINDTGKNWRHVYKALTVLEYLVAHGSERVIDEIKEHSYQISWKRSRKNVRKKSQNLVVLVNDKERIVEVRQKAAVNREKFRNNTPGGMYRPGSHSSIGSYGDRYEEDRYASREEDRNGYGYGREREMGSRDDDRYNRDGDRYGRDYEERYGRDGYRDDDRGRSRSVDYNYDDTRSRNSDRDRDFDDDGQHSSRGSNAKVEDQSLEARLQRKLSEQNSGAPPSYEEAVGEAQSPVPERDVETSAESAPRGSSPHASDNPSLTSAPTGSSPVNNNPTEVTAAASTSVAASTAVSTQETEPTDDFFDPRGPTSAAPTTSNFGEIDLLGSLSDSFSSNALPLVPATSGISTPEANTGSTASFAAPSSGSNNFNQSFEDPFGDSPFKADTSVETAPSQHHAPQTTEPSQSDGFNADMSNFGFGDSFSIVPYSASAPSDTQPFSANSQFLSQDSETDILADILPPAPLPEMTSQQNSSAPTFGQPSPSFSTSSGPFSEPTGQLTPHQGFSAATNQPAQTLPSGQFSQPGFSASSSSFSASTSPYAQQPFPSHSGQPGMPGFSSSTGHSMQPPFASQGGQSTAQTSGHTYGGLYSLDTSLTPGAQNMYSQSQNGYNGSMNSGNYLPQGSSTGFPSQMTPQAPTAQPAQITNFPHHGGSTASPSPTDQASQFNNQSFFGQQGNAAPFSSSYTHQVPAPNASPYAISAAPNSLVSQPSKDKFETKSTVWADTLSRGLVNLNISGPKTNPLADIGIDFESINRKEKRMEKPTNTPVTSTVNMGKAMGSGSGIGRAGAGALRPNPNSMMGSGMGMGMGMGNAPGGMGMGGYGGGMTSMGMGMGGMGGIGMGQGYQMQPPNGMPPGSNMPGNYNNNMMRPGGYAQQPYGGYR*