Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215390 | sp|Q9LHS0|CAP10_ARATH | 63.458 | 561 | 146 | 13 | 9 | 541 | 11 | 540 | 0.0 | 668 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215390 | G7JFD3 | 93.583 | 561 | 4 | 2 | 1 | 545 | 1 | 545 | 0.0 | 1075 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa1215390 | 0.806853 | 6.721449e-50 | -8.615850e-47 |
| Msa0092220 | Msa1215390 | 0.806482 | 8.052240e-50 | -8.615850e-47 |
| Msa0614480 | Msa1215390 | 0.819063 | 1.414059e-52 | -8.615850e-47 |
| Msa0631380 | Msa1215390 | 0.812494 | 4.121314e-51 | -8.615850e-47 |
| Msa0695760 | Msa1215390 | 0.812488 | 4.133618e-51 | -8.615850e-47 |
| Msa0721930 | Msa1215390 | 0.802323 | 5.924041e-49 | -8.615850e-47 |
| Msa0727510 | Msa1215390 | 0.801846 | 7.426339e-49 | -8.615850e-47 |
| Msa0762930 | Msa1215390 | 0.805386 | 1.368679e-49 | -8.615850e-47 |
| Msa0143590 | Msa1215390 | 0.809828 | 1.559893e-50 | -8.615850e-47 |
| Msa0177320 | Msa1215390 | 0.809427 | 1.902920e-50 | -8.615850e-47 |
| Msa0390170 | Msa1215390 | 0.805759 | 1.143119e-49 | -8.615850e-47 |
| Msa0416040 | Msa1215390 | 0.800113 | 1.678427e-48 | -8.615850e-47 |
| Msa1010440 | Msa1215390 | 0.842074 | 3.228159e-58 | -8.615850e-47 |
| Msa1013190 | Msa1215390 | 0.803212 | 3.881985e-49 | -8.615850e-47 |
| Msa1041250 | Msa1215390 | 0.822578 | 2.197286e-53 | -8.615850e-47 |
| Msa1052000 | Msa1215390 | 0.848295 | 6.715027e-60 | -8.615850e-47 |
| Msa1068700 | Msa1215390 | 0.813791 | 2.140877e-51 | -8.615850e-47 |
| Msa1096760 | Msa1215390 | 0.837174 | 6.074319e-57 | -8.615850e-47 |
| Msa1140410 | Msa1215390 | 0.841825 | 3.757140e-58 | -8.615850e-47 |
| Msa1165670 | Msa1215390 | 0.801950 | 7.069329e-49 | -8.615850e-47 |
| Msa1179340 | Msa1215390 | 0.817920 | 2.567858e-52 | -8.615850e-47 |
| Msa1192800 | Msa1215390 | 0.810524 | 1.104664e-50 | -8.615850e-47 |
| Msa1215390 | Msa1299200 | 0.807569 | 4.741603e-50 | -8.615850e-47 |
| Msa1215390 | Msa1304790 | 0.842001 | 3.374982e-58 | -8.615850e-47 |
| Msa1215390 | Msa1327440 | 0.803249 | 3.814992e-49 | -8.615850e-47 |
| Msa1215390 | Msa1366480 | 0.827128 | 1.856318e-54 | -8.615850e-47 |
| Msa1215390 | Msa1435550 | 0.801093 | 1.059117e-48 | -8.615850e-47 |
| Msa0866080 | Msa1215390 | 0.805875 | 1.080779e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215390 | MtrunA17_Chr4g0064391 | 93.583 | 561 | 4 | 2 | 1 | 545 | 1 | 545 | 0.0 | 1075 |
| Msa1215390 | MtrunA17_Chr8g0376161 | 48.980 | 588 | 228 | 14 | 4 | 545 | 2 | 563 | 9.37e-168 | 487 |
| Msa1215390 | MtrunA17_Chr4g0071851 | 46.141 | 583 | 260 | 15 | 4 | 539 | 2 | 577 | 4.01e-147 | 435 |
| Msa1215390 | MtrunA17_Chr2g0298681 | 63.158 | 323 | 108 | 4 | 4 | 323 | 2 | 316 | 8.68e-140 | 417 |
| Msa1215390 | MtrunA17_Chr2g0305391 | 38.918 | 573 | 245 | 15 | 9 | 520 | 1 | 529 | 4.35e-117 | 357 |
| Msa1215390 | MtrunA17_Chr4g0064081 | 28.099 | 605 | 341 | 16 | 7 | 530 | 4 | 595 | 1.36e-67 | 229 |
| Msa1215390 | MtrunA17_Chr8g0336601 | 29.783 | 554 | 309 | 16 | 5 | 493 | 2 | 540 | 2.86e-64 | 220 |
| Msa1215390 | MtrunA17_Chr2g0278681 | 30.662 | 574 | 307 | 14 | 7 | 499 | 4 | 567 | 8.44e-64 | 219 |
| Msa1215390 | MtrunA17_Chr3g0119631 | 33.758 | 314 | 189 | 4 | 9 | 316 | 5 | 305 | 1.81e-57 | 206 |
| Msa1215390 | MtrunA17_Chr3g0137621 | 46.053 | 152 | 79 | 2 | 5 | 155 | 2 | 151 | 3.83e-38 | 148 |
| Msa1215390 | MtrunA17_Chr3g0137621 | 27.208 | 419 | 232 | 13 | 188 | 543 | 227 | 635 | 5.82e-24 | 106 |
| Msa1215390 | MtrunA17_Chr8g0392221 | 29.412 | 323 | 200 | 9 | 9 | 319 | 5 | 311 | 7.43e-37 | 142 |
| Msa1215390 | MtrunA17_Chr6g0476971 | 25.676 | 296 | 199 | 6 | 1 | 288 | 1 | 283 | 1.96e-22 | 99.8 |
| Msa1215390 | MtrunA17_Chr1g0162241 | 24.085 | 328 | 212 | 13 | 10 | 326 | 8 | 309 | 6.11e-17 | 82.8 |
| Msa1215390 | MtrunA17_Chr3g0123621 | 25.519 | 337 | 208 | 13 | 6 | 331 | 2 | 306 | 7.80e-17 | 82.0 |
| Msa1215390 | MtrunA17_Chr8g0375541 | 22.769 | 325 | 205 | 14 | 9 | 317 | 4 | 298 | 9.74e-15 | 76.3 |
| Msa1215390 | MtrunA17_Chr8g0381681 | 27.232 | 224 | 139 | 8 | 5 | 223 | 2 | 206 | 4.34e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215390 | AT5G35200.1 | 63.458 | 561 | 146 | 13 | 9 | 541 | 11 | 540 | 0.0 | 668 |
| Msa1215390 | AT5G35200.2 | 63.458 | 561 | 146 | 13 | 9 | 541 | 11 | 540 | 0.0 | 668 |
| Msa1215390 | AT4G25940.1 | 50.379 | 528 | 213 | 9 | 4 | 483 | 2 | 528 | 4.75e-158 | 464 |
| Msa1215390 | AT2G01600.1 | 46.734 | 597 | 236 | 17 | 4 | 545 | 2 | 571 | 9.96e-154 | 452 |
| Msa1215390 | AT1G14910.1 | 47.653 | 554 | 228 | 15 | 4 | 519 | 2 | 531 | 1.85e-148 | 442 |
| Msa1215390 | AT5G57200.1 | 63.975 | 322 | 110 | 2 | 4 | 325 | 2 | 317 | 5.16e-143 | 425 |
| Msa1215390 | AT1G14910.2 | 46.931 | 554 | 227 | 16 | 4 | 519 | 2 | 526 | 5.64e-143 | 428 |
| Msa1215390 | AT1G03050.1 | 31.497 | 581 | 302 | 17 | 7 | 505 | 4 | 570 | 1.74e-71 | 240 |
| Msa1215390 | AT4G02650.1 | 27.715 | 617 | 351 | 15 | 7 | 542 | 4 | 606 | 1.18e-59 | 208 |
| Msa1215390 | AT4G32285.1 | 28.325 | 579 | 317 | 11 | 8 | 492 | 4 | 578 | 1.25e-58 | 206 |
| Msa1215390 | AT4G32285.2 | 28.325 | 579 | 317 | 11 | 8 | 492 | 4 | 578 | 1.25e-58 | 206 |
| Msa1215390 | AT1G05020.1 | 31.818 | 330 | 197 | 5 | 9 | 316 | 5 | 328 | 1.50e-54 | 195 |
| Msa1215390 | AT2G25430.1 | 46.980 | 149 | 76 | 2 | 8 | 155 | 4 | 150 | 5.62e-38 | 148 |
| Msa1215390 | AT2G25430.1 | 25.356 | 351 | 216 | 4 | 188 | 492 | 247 | 597 | 5.03e-20 | 94.4 |
| Msa1215390 | AT1G33340.1 | 24.825 | 286 | 192 | 9 | 9 | 288 | 9 | 277 | 2.45e-17 | 84.3 |
| Msa1215390 | AT4G40080.1 | 29.577 | 213 | 128 | 7 | 4 | 206 | 2 | 202 | 1.09e-16 | 82.4 |
| Msa1215390 | AT1G25240.1 | 23.642 | 313 | 202 | 8 | 10 | 314 | 5 | 288 | 1.26e-14 | 76.3 |
| Msa1215390 | AT1G25240.2 | 23.642 | 313 | 202 | 8 | 10 | 314 | 6 | 289 | 1.28e-14 | 76.3 |
| Msa1215390 | AT1G68110.1 | 23.077 | 312 | 209 | 11 | 10 | 314 | 5 | 292 | 3.20e-13 | 72.0 |
Find 187 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGATTTCCTTTAATGTTAA+TGG | 0.134232 | 8_1:+76629798 | None:intergenic |
| CATGAAGAACTCATTAATTA+TGG | 0.161452 | 8_1:-76627745 | Msa1215390:CDS |
| CAGCTTCTCTATCGAGTTAT+TGG | 0.162944 | 8_1:-76627169 | Msa1215390:CDS |
| ATTTGACCCATTAACATTAA+AGG | 0.167209 | 8_1:-76629805 | Msa1215390:five_prime_UTR |
| CTTGGAGTCAAGATTAAATT+TGG | 0.186318 | 8_1:+76629740 | None:intergenic |
| TCAATAGCCAAAACTTCTTT+TGG | 0.225329 | 8_1:+76626006 | None:intergenic |
| TAACCCCACCCTCCACTTAT+AGG | 0.234319 | 8_1:-76629863 | Msa1215390:five_prime_UTR |
| AACCCCACCCTCCACTTATA+GGG | 0.241438 | 8_1:-76629862 | Msa1215390:five_prime_UTR |
| ATGGATTATAGCTAGCATTT+TGG | 0.247934 | 8_1:+76624403 | None:intergenic |
| TGCTGCTCCAAAAGAAGTTT+TGG | 0.257824 | 8_1:-76626013 | Msa1215390:CDS |
| CAACAATCTGCAAATCCTTT+TGG | 0.269633 | 8_1:-76624210 | Msa1215390:CDS |
| GCACGTTCCTCCTTCACTTC+TGG | 0.277152 | 8_1:+76625970 | None:intergenic |
| CGAATGTGTTTCTCCTTAGC+TGG | 0.277512 | 8_1:+76628771 | None:intergenic |
| AATCAAAATCACGATCTATA+AGG | 0.285386 | 8_1:+76629479 | None:intergenic |
| TGTTCCAGCTGCTGCAGAAT+TGG | 0.309206 | 8_1:-76625736 | Msa1215390:CDS |
| CGATTTCCTTTAATGTTAAT+GGG | 0.310689 | 8_1:+76629799 | None:intergenic |
| TTTGGCTATTGAATACAATA+AGG | 0.318480 | 8_1:-76625995 | Msa1215390:CDS |
| ACAACCACCACCTGAACTTT+TGG | 0.320948 | 8_1:-76625896 | Msa1215390:intron |
| ATATGCCGTAATCTTGATAT+TGG | 0.321801 | 8_1:-76626581 | Msa1215390:CDS |
| GTCATAGAGGACCAAAGATT+TGG | 0.323330 | 8_1:-76627230 | Msa1215390:intron |
| TTCGGCAGTATCCAAATCTT+TGG | 0.326491 | 8_1:+76627219 | None:intergenic |
| TAAATAGCAGATGAGGGTTT+TGG | 0.334431 | 8_1:-76623974 | Msa1215390:three_prime_UTR |
| GAAATTTGTTCCTGATGAAT+TGG | 0.339892 | 8_1:-76623864 | Msa1215390:three_prime_UTR |
| ATCTTGAGGCCGAGAAAATT+AGG | 0.347570 | 8_1:-76629768 | Msa1215390:five_prime_UTR |
| CAGTTTCCATTCCCTGTACA+TGG | 0.355094 | 8_1:-76623832 | Msa1215390:three_prime_UTR |
| TAGTGATGGAACTGTTAATA+TGG | 0.357056 | 8_1:-76626867 | Msa1215390:CDS |
| GTATATATCAAGAGCTTTCA+AGG | 0.370309 | 8_1:+76626735 | None:intergenic |
| GAGAGAGAGAAAAGAGAAAA+GGG | 0.372468 | 8_1:+76629607 | None:intergenic |
| CCAGCCGGTGCTTGCTCCCA+TGG | 0.373647 | 8_1:+76624384 | None:intergenic |
| TGGAACCGCTGGGTGGGAAT+TGG | 0.379150 | 8_1:-76625010 | Msa1215390:CDS |
| AAAAGCACTTGGAGCTCTTA+AGG | 0.379703 | 8_1:-76628977 | Msa1215390:CDS |
| GAACAGAAAATTTGTATCAT+AGG | 0.383499 | 8_1:-76624038 | Msa1215390:three_prime_UTR |
| AAACATGGATACTCCACATT+TGG | 0.384395 | 8_1:-76624077 | Msa1215390:three_prime_UTR |
| ATTAACAGTTCCATCACTAA+TGG | 0.385098 | 8_1:+76626871 | None:intergenic |
| TATGAGCTGCTTGCTTCGTT+TGG | 0.393592 | 8_1:+76629661 | None:intergenic |
| ATGAAGAACTCATTAATTAT+GGG | 0.394956 | 8_1:-76627744 | Msa1215390:CDS |
| GCTGTTTCAAATCATGCAAA+TGG | 0.395050 | 8_1:-76625030 | Msa1215390:CDS |
| TGCGTTAACAGTAACCAATC+AGG | 0.399073 | 8_1:+76623894 | None:intergenic |
| TCTTCCAATTCTGCAGCAGC+TGG | 0.400965 | 8_1:+76625732 | None:intergenic |
| ATCAAAATCACGATCTATAA+GGG | 0.403527 | 8_1:+76629480 | None:intergenic |
| TTGGCTTTAGCCATCGTTCC+CGG | 0.405036 | 8_1:-76625699 | Msa1215390:intron |
| GATTATCAAAGACACATAAC+TGG | 0.406456 | 8_1:-76628351 | Msa1215390:CDS |
| AGAGAGAGAGAAAAGAGAAA+AGG | 0.406958 | 8_1:+76629606 | None:intergenic |
| CTTTCGAACTATTGCTCCCT+GGG | 0.408339 | 8_1:+76626379 | None:intergenic |
| AATTTCTCTCTAGCTATCTA+TGG | 0.408342 | 8_1:+76624006 | None:intergenic |
| ATACAGAAGGGTTGGGCTGC+AGG | 0.411427 | 8_1:-76626716 | Msa1215390:intron |
| TGGTATTCAGGCTGGAGGTT+TGG | 0.422718 | 8_1:-76624475 | Msa1215390:intron |
| AACTGTTAATATGGTTGATA+AGG | 0.423678 | 8_1:-76626858 | Msa1215390:intron |
| TTCTCAGTGCATCATCATAT+AGG | 0.427987 | 8_1:+76624433 | None:intergenic |
| GGTGGTGTTTCCACTTTCAC+AGG | 0.433455 | 8_1:+76625922 | None:intergenic |
| AATTCTGCAGCAGCTGGAAC+AGG | 0.433629 | 8_1:+76625738 | None:intergenic |
| GATACATGAAAGACTGTTGC+TGG | 0.435439 | 8_1:+76624271 | None:intergenic |
| CTATCGAGTTATTGGTTGCC+AGG | 0.437344 | 8_1:-76627161 | Msa1215390:intron |
| TGCTCCACACTCTGTTCAAA+TGG | 0.437973 | 8_1:-76624307 | Msa1215390:CDS |
| TGGAGCAGCCATTGTATTAG+AGG | 0.443445 | 8_1:+76624323 | None:intergenic |
| ATATTGCAATTAGGTTGCTT+CGG | 0.443544 | 8_1:-76626915 | Msa1215390:intron |
| AGCTGCTTGCTTCGTTTGGT+TGG | 0.445468 | 8_1:+76629665 | None:intergenic |
| ACCGTCTGAACCTGTGAAAG+TGG | 0.453685 | 8_1:-76625932 | Msa1215390:CDS |
| CCTTTCGAACTATTGCTCCC+TGG | 0.454270 | 8_1:+76626378 | None:intergenic |
| GAAGTTCATCAAAGTTGAGC+AGG | 0.463775 | 8_1:-76626549 | Msa1215390:intron |
| GTTACTGTTAACGCATTAGC+AGG | 0.471154 | 8_1:-76623886 | Msa1215390:three_prime_UTR |
| ACAGGTTCAGACGGTGGAGG+GGG | 0.472068 | 8_1:+76625940 | None:intergenic |
| AATCATGCAAATGGAACCGC+TGG | 0.473715 | 8_1:-76625021 | Msa1215390:CDS |
| GTTAATCCACTCGAATTAGT+TGG | 0.475229 | 8_1:+76629882 | None:intergenic |
| GAAAACAATACCAATTCATC+AGG | 0.476238 | 8_1:+76623854 | None:intergenic |
| CAGCATGGGATTATTCTGCA+TGG | 0.479621 | 8_1:-76627576 | Msa1215390:CDS |
| AAAATGCTAGCTATAATCCA+TGG | 0.481886 | 8_1:-76624401 | Msa1215390:CDS |
| TTAAATAGAACCCCTATAAG+TGG | 0.482028 | 8_1:+76629851 | None:intergenic |
| AGTTCAGGTGGTGGTTGTAC+TGG | 0.483951 | 8_1:+76625901 | None:intergenic |
| AGCATGGGATTATTCTGCAT+GGG | 0.485591 | 8_1:-76627575 | Msa1215390:CDS |
| AATGAGTTCTTCATGAAATG+TGG | 0.492798 | 8_1:+76627753 | None:intergenic |
| AGCAATAGTTCGAAAGGATC+AGG | 0.493344 | 8_1:-76626372 | Msa1215390:intron |
| GAATGTGTTTCTCCTTAGCT+GGG | 0.493431 | 8_1:+76628772 | None:intergenic |
| CTATGTCAAAGATGCTCCCC+AGG | 0.495058 | 8_1:-76626396 | Msa1215390:CDS |
| CACGTCCAATATCAAGATTA+CGG | 0.495283 | 8_1:+76626576 | None:intergenic |
| AAAGATGACTCGAGTCCAAA+TGG | 0.496856 | 8_1:-76627685 | Msa1215390:intron |
| GGACACCACTACTGTCTCAT+TGG | 0.499844 | 8_1:-76628956 | Msa1215390:CDS |
| TCACAGGTTCAGACGGTGGA+GGG | 0.500208 | 8_1:+76625938 | None:intergenic |
| TCACCGTGCTCTGAGGGAGG+TGG | 0.500344 | 8_1:-76627779 | Msa1215390:CDS |
| ACAGTTCACCCCTATGGCTC+AGG | 0.500843 | 8_1:-76624168 | Msa1215390:CDS |
| GTTTAGATGAGGCCTGTGTA+AGG | 0.501347 | 8_1:+76624123 | None:intergenic |
| ATCTTTGACATAGTCTTCCA+TGG | 0.501357 | 8_1:+76626406 | None:intergenic |
| TAAGGATTGTATGATTGAAC+AGG | 0.502702 | 8_1:+76624141 | None:intergenic |
| CACAGGTTCAGACGGTGGAG+GGG | 0.502984 | 8_1:+76625939 | None:intergenic |
| ATGGCTTGCATAAACGATGA+TGG | 0.503236 | 8_1:+76626425 | None:intergenic |
| AGCGAGAGCATGGATGCAAT+AGG | 0.506646 | 8_1:+76628378 | None:intergenic |
| TGTCATTCACCGTGCTCTGA+GGG | 0.508222 | 8_1:-76627785 | Msa1215390:CDS |
| CCATATTGAGGATTTCCAAA+AGG | 0.508316 | 8_1:+76624195 | None:intergenic |
| GGATTTGCAGATTGTTGTTG+AGG | 0.508477 | 8_1:+76624216 | None:intergenic |
| TAGAGAAGCTGTTGTAAAGC+TGG | 0.511890 | 8_1:+76627181 | None:intergenic |
| ACAGTAATTACCAAAAGTTC+AGG | 0.512616 | 8_1:+76625886 | None:intergenic |
| TGGCTTGCATAAACGATGAT+GGG | 0.513219 | 8_1:+76626426 | None:intergenic |
| TTGATATATACAGAAGGGTT+GGG | 0.514045 | 8_1:-76626723 | Msa1215390:CDS |
| TGGCAACTGCTCTAGCAATT+CGG | 0.514773 | 8_1:+76627201 | None:intergenic |
| ATATACTTCCCACCATGTAC+AGG | 0.516614 | 8_1:+76623820 | None:intergenic |
| GGAGCCACAGTTCACCCCTA+TGG | 0.518635 | 8_1:-76624174 | Msa1215390:CDS |
| CGATCTCAGCTACAAGACCT+AGG | 0.519172 | 8_1:-76628411 | Msa1215390:CDS |
| CTTGATATATACAGAAGGGT+TGG | 0.523281 | 8_1:-76626724 | Msa1215390:CDS |
| TCCACATTTGGTTGTATGCG+TGG | 0.523620 | 8_1:-76624065 | Msa1215390:three_prime_UTR |
| CAAATTTAATCTTGACTCCA+AGG | 0.524488 | 8_1:-76629739 | Msa1215390:five_prime_UTR |
| TGCTTCGTTTGGTTGGTCGT+CGG | 0.525049 | 8_1:+76629672 | None:intergenic |
| TAAGGTCAACAGTGGTTACA+AGG | 0.525222 | 8_1:-76628932 | Msa1215390:intron |
| GATTCAGTTAGCACTCCAAT+TGG | 0.526089 | 8_1:-76627011 | Msa1215390:intron |
| TGTGAGAGGGAGAATATGTC+TGG | 0.529556 | 8_1:-76629021 | Msa1215390:exon |
| TTCCCACCATGTACAGGGAA+TGG | 0.533479 | 8_1:+76623826 | None:intergenic |
| ATTGCATCCATGCTCTCGCT+AGG | 0.535134 | 8_1:-76628375 | Msa1215390:CDS |
| TGAACTGTGGCTCCATATTG+AGG | 0.535591 | 8_1:+76624183 | None:intergenic |
| ATTTATCAAGCCATTAGTGA+TGG | 0.536222 | 8_1:-76626881 | Msa1215390:CDS |
| GGTTGCATCATGCCTCCAGC+CGG | 0.537046 | 8_1:+76624369 | None:intergenic |
| AACCCCTATAAGTGGAGGGT+GGG | 0.538439 | 8_1:+76629859 | None:intergenic |
| TAATCCATGGGAGCAAGCAC+CGG | 0.538808 | 8_1:-76624388 | Msa1215390:CDS |
| TTTAATCTTGACTCCAAGGA+AGG | 0.541160 | 8_1:-76629735 | Msa1215390:five_prime_UTR |
| TCATGTTGAACGCCCAGCTA+AGG | 0.541327 | 8_1:-76628784 | Msa1215390:CDS |
| TTCACAGGTTCAGACGGTGG+AGG | 0.541839 | 8_1:+76625937 | None:intergenic |
| CAATAGGCAACGTCAGCCCT+AGG | 0.542438 | 8_1:+76628394 | None:intergenic |
| CTATTTGGTATTCAGGCTGG+AGG | 0.543661 | 8_1:-76624480 | Msa1215390:intron |
| GATTTGCAGATTGTTGTTGA+GGG | 0.546331 | 8_1:+76624217 | None:intergenic |
| ACCCCTATAAGTGGAGGGTG+GGG | 0.554611 | 8_1:+76629860 | None:intergenic |
| AACAGGCATACCTGAGCCAT+AGG | 0.555181 | 8_1:+76624158 | None:intergenic |
| CCTCATCTAAACATTTCTTG+TGG | 0.555267 | 8_1:-76624112 | Msa1215390:exon |
| TTCCATTCCCTGTACATGGT+GGG | 0.556286 | 8_1:-76623828 | Msa1215390:three_prime_UTR |
| TTTGAATAAATAGCAGATGA+GGG | 0.556478 | 8_1:-76623980 | Msa1215390:three_prime_UTR |
| TGCAAATGGAACCGCTGGGT+GGG | 0.556842 | 8_1:-76625016 | Msa1215390:CDS |
| ATGAGTTCTTCATGAAATGT+GGG | 0.558036 | 8_1:+76627754 | None:intergenic |
| CAATAAGGAACCAGAAGTGA+AGG | 0.558157 | 8_1:-76625980 | Msa1215390:CDS |
| CACTACTGTCTCATTGGCTA+AGG | 0.558365 | 8_1:-76628950 | Msa1215390:CDS |
| CCACATTTGGTTGTATGCGT+GGG | 0.558414 | 8_1:-76624064 | Msa1215390:three_prime_UTR |
| ATTACCAAAAGTTCAGGTGG+TGG | 0.561363 | 8_1:+76625892 | None:intergenic |
| GCAGCAACAAATGATGATGA+TGG | 0.566303 | 8_1:-76624241 | Msa1215390:CDS |
| TCCACTTTCACAGGTTCAGA+CGG | 0.567213 | 8_1:+76625931 | None:intergenic |
| ATTGGAAGAGAAGAATGCCT+TGG | 0.567227 | 8_1:-76625718 | Msa1215390:CDS |
| CGTAATCTTGATATTGGACG+TGG | 0.570140 | 8_1:-76626575 | Msa1215390:CDS |
| GCATGATTTGAAACAGCAGA+AGG | 0.573496 | 8_1:+76625036 | None:intergenic |
| GCGTTAACAGTAACCAATCA+GGG | 0.577375 | 8_1:+76623895 | None:intergenic |
| ACCCCACCCTCCACTTATAG+GGG | 0.580420 | 8_1:-76629861 | Msa1215390:five_prime_UTR |
| AACAGTTTGAGAAAAGCACT+TGG | 0.582322 | 8_1:-76628988 | Msa1215390:CDS |
| CAGAAAATTACCGGGAACGA+TGG | 0.585889 | 8_1:+76625689 | None:intergenic |
| CCCACGCATACAACCAAATG+TGG | 0.588826 | 8_1:+76624064 | None:intergenic |
| TAAGAACCAACTAATTCGAG+TGG | 0.590600 | 8_1:-76629888 | Msa1215390:five_prime_UTR |
| AAGCTCTTGATATATACAGA+AGG | 0.592487 | 8_1:-76626729 | Msa1215390:CDS |
| CCACAAGAAATGTTTAGATG+AGG | 0.593524 | 8_1:+76624112 | None:intergenic |
| TTATTTACAGCTGCTCCTTG+TGG | 0.595184 | 8_1:+76627040 | None:intergenic |
| AACTGAGTAACTTTAGTGCA+AGG | 0.595650 | 8_1:-76623740 | Msa1215390:three_prime_UTR |
| CCAGGGAGCAATAGTTCGAA+AGG | 0.596084 | 8_1:-76626378 | Msa1215390:CDS |
| ATCATCGTTTATGCAAGCCA+TGG | 0.597268 | 8_1:-76626423 | Msa1215390:CDS |
| GGCTTGCATAAACGATGATG+GGG | 0.600480 | 8_1:+76626427 | None:intergenic |
| ACAGGCATACCTGAGCCATA+GGG | 0.603728 | 8_1:+76624159 | None:intergenic |
| GATCCACCTCCCTCAGAGCA+CGG | 0.603781 | 8_1:+76627776 | None:intergenic |
| ATGCAAATGGAACCGCTGGG+TGG | 0.604316 | 8_1:-76625017 | Msa1215390:CDS |
| ATTTGCAGATTGTTGTTGAG+GGG | 0.604944 | 8_1:+76624218 | None:intergenic |
| TTGTCATTCACCGTGCTCTG+AGG | 0.605568 | 8_1:-76627786 | Msa1215390:CDS |
| AATAGAACCCCTATAAGTGG+AGG | 0.606033 | 8_1:+76629854 | None:intergenic |
| TTTCCATTCCCTGTACATGG+TGG | 0.607391 | 8_1:-76623829 | Msa1215390:three_prime_UTR |
| TCAGGTGGTGGTTGTACTGG+TGG | 0.607883 | 8_1:+76625904 | None:intergenic |
| GCTAAGGAGAAACACATTCG+AGG | 0.614196 | 8_1:-76628768 | Msa1215390:intron |
| ACTTTCACAGGTTCAGACGG+TGG | 0.618055 | 8_1:+76625934 | None:intergenic |
| GATCTCAGCTACAAGACCTA+GGG | 0.619658 | 8_1:-76628410 | Msa1215390:CDS |
| TTTCGTATGCTGCAGCCACA+AGG | 0.624793 | 8_1:-76627055 | Msa1215390:intron |
| GAACCCCTATAAGTGGAGGG+TGG | 0.625042 | 8_1:+76629858 | None:intergenic |
| AAATGCTAGCTATAATCCAT+GGG | 0.626464 | 8_1:-76624400 | Msa1215390:CDS |
| CATTCACCGTGCTCTGAGGG+AGG | 0.628270 | 8_1:-76627782 | Msa1215390:CDS |
| CAGGCATACCTGAGCCATAG+GGG | 0.630660 | 8_1:+76624160 | None:intergenic |
| AGCTCTTGATATATACAGAA+GGG | 0.631545 | 8_1:-76626728 | Msa1215390:CDS |
| AAAATCACGATCTATAAGGG+TGG | 0.637634 | 8_1:+76629483 | None:intergenic |
| GCTGCCATTTGAACAGAGTG+TGG | 0.639866 | 8_1:+76624303 | None:intergenic |
| TATACTTCCCACCATGTACA+GGG | 0.640986 | 8_1:+76623821 | None:intergenic |
| AAATCGAACCTAAAATCTTG+AGG | 0.646849 | 8_1:-76629782 | Msa1215390:five_prime_UTR |
| GGGAACGATGGCTAAAGCCA+AGG | 0.647252 | 8_1:+76625701 | None:intergenic |
| GTAATTACCAAAAGTTCAGG+TGG | 0.648044 | 8_1:+76625889 | None:intergenic |
| ATAGAACCCCTATAAGTGGA+GGG | 0.648619 | 8_1:+76629855 | None:intergenic |
| TAAGGAACCAGAAGTGAAGG+AGG | 0.654919 | 8_1:-76625977 | Msa1215390:CDS |
| TATGTTGAAGAAAGAAGACG+AGG | 0.656711 | 8_1:+76629429 | None:intergenic |
| CAATCATACAATCCTTACAC+AGG | 0.659165 | 8_1:-76624135 | Msa1215390:CDS |
| CTTAGCCAATGAGACAGTAG+TGG | 0.664093 | 8_1:+76628951 | None:intergenic |
| TCTAGCTATCTATGGCACAC+AGG | 0.669382 | 8_1:+76624014 | None:intergenic |
| TAGAAGTCATATGCTCAACA+TGG | 0.670556 | 8_1:-76627716 | Msa1215390:CDS |
| TATGTCAAAGATGCTCCCCA+GGG | 0.677197 | 8_1:-76626395 | Msa1215390:CDS |
| ATCATGCAAATGGAACCGCT+GGG | 0.691533 | 8_1:-76625020 | Msa1215390:CDS |
| TGTGTTGAAGTATGACATTG+AGG | 0.694540 | 8_1:-76627506 | Msa1215390:CDS |
| ATTATCAAAGACACATAACT+GGG | 0.698534 | 8_1:-76628350 | Msa1215390:CDS |
| TTTCGAACTATTGCTCCCTG+GGG | 0.700129 | 8_1:+76626380 | None:intergenic |
| GAGAGGGAGAATATGTCTGG+TGG | 0.700785 | 8_1:-76629018 | Msa1215390:exon |
| ATTATGTGAATGTTATCCGA+TGG | 0.716582 | 8_1:-76627354 | Msa1215390:intron |
| TCATTGGCTAAGGTCAACAG+TGG | 0.721103 | 8_1:-76628940 | Msa1215390:CDS |
| GCTTGCATAAACGATGATGG+GGG | 0.721996 | 8_1:+76626428 | None:intergenic |
| TGAGCCATAGGGGTGAACTG+TGG | 0.722937 | 8_1:+76624170 | None:intergenic |
| AAGAGCCAATTCCCACCCAG+CGG | 0.743374 | 8_1:+76625005 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATGTATTTTTTTAGT+TGG | - | chr8_1:76624428-76624447 | Msa1215390:CDS | 10.0% |
| !! | ATAAAATAATTGAAAAGAAT+TGG | + | chr8_1:76627117-76627136 | None:intergenic | 10.0% |
| !!! | TGTTTTAGATTAAAATAAAA+TGG | + | chr8_1:76627558-76627577 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTAATCTAAAAC+AGG | - | chr8_1:76627557-76627576 | Msa1215390:CDS | 10.0% |
| !! | AAATAATTAACAATAGTAAT+TGG | - | chr8_1:76627999-76628018 | Msa1215390:intron | 10.0% |
| !!! | TGGTTATTTTATTTTATTGT+CGG | - | chr8_1:76624403-76624422 | Msa1215390:CDS | 15.0% |
| !!! | GTCAATGATTTTTTTTTTTT+TGG | - | chr8_1:76624540-76624559 | Msa1215390:intron | 15.0% |
| !!! | GTTTTTATTCCATATAAAAA+AGG | + | chr8_1:76625314-76625333 | None:intergenic | 15.0% |
| !! | TTCATTAAATTCAAAAAAGT+TGG | + | chr8_1:76626486-76626505 | None:intergenic | 15.0% |
| !! | AAACAAACAAAAATTAAGTA+TGG | + | chr8_1:76626640-76626659 | None:intergenic | 15.0% |
| !!! | CTTTAAAAATATTTACTAAC+TGG | - | chr8_1:76627527-76627546 | Msa1215390:CDS | 15.0% |
| !!! | AGTAATAATAAATTTGCTAA+TGG | + | chr8_1:76628296-76628315 | None:intergenic | 15.0% |
| !!! | ACTAATACTTTTAATATTAG+AGG | - | chr8_1:76628375-76628394 | Msa1215390:CDS | 15.0% |
| !!! | TATATGATTTTTTATGTACA+AGG | - | chr8_1:76629659-76629678 | Msa1215390:five_prime_UTR | 15.0% |
| !! | TGTATTTGATCTTATCAAAT+TGG | - | chr8_1:76624755-76624774 | Msa1215390:intron | 20.0% |
| !!! | AAATTGGTTTATTGTTTTGT+AGG | - | chr8_1:76624771-76624790 | Msa1215390:intron | 20.0% |
| !! | AAAACACAAATCATAAAAGA+GGG | + | chr8_1:76624880-76624899 | None:intergenic | 20.0% |
| !! | AAAAACACAAATCATAAAAG+AGG | + | chr8_1:76624881-76624900 | None:intergenic | 20.0% |
| !!! | CTTTTATGATTTGTGTTTTT+TGG | - | chr8_1:76624881-76624900 | Msa1215390:intron | 20.0% |
| !! | ATATTTATAGATTGTATACG+AGG | - | chr8_1:76625105-76625124 | Msa1215390:intron | 20.0% |
| !! | TATTTATAGATTGTATACGA+GGG | - | chr8_1:76625106-76625125 | Msa1215390:intron | 20.0% |
| !!! | AGATCTTATCCTTTTTTATA+TGG | - | chr8_1:76625302-76625321 | Msa1215390:intron | 20.0% |
| !! | ATGAAGAACTCATTAATTAT+GGG | - | chr8_1:76625865-76625884 | Msa1215390:intron | 20.0% |
| !! | TTTATAACAAGATCAATGAT+GGG | + | chr8_1:76625964-76625983 | None:intergenic | 20.0% |
| !! | ATTTATAACAAGATCAATGA+TGG | + | chr8_1:76625965-76625984 | None:intergenic | 20.0% |
| !! | CATTAAGTTTATAATCTTAC+AGG | + | chr8_1:76626137-76626156 | None:intergenic | 20.0% |
| !! | AATATAAGGTATATTCAGAA+AGG | + | chr8_1:76626679-76626698 | None:intergenic | 20.0% |
| !! | ATATACCTTATATTGCAATT+AGG | - | chr8_1:76626685-76626704 | Msa1215390:intron | 20.0% |
| !!! | TAATTACTGTGTTTTTCTTT+TGG | - | chr8_1:76627736-76627755 | Msa1215390:CDS | 20.0% |
| !! | TGATTAATGAGAGAAAAATT+GGG | + | chr8_1:76628175-76628194 | None:intergenic | 20.0% |
| !! | ATGATTAATGAGAGAAAAAT+TGG | + | chr8_1:76628176-76628195 | None:intergenic | 20.0% |
| !! | ACATGCATTTATTAATGAAT+AGG | - | chr8_1:76628246-76628265 | Msa1215390:intron | 20.0% |
| !! | CATGCATTTATTAATGAATA+GGG | - | chr8_1:76628247-76628266 | Msa1215390:intron | 20.0% |
| !! | ATATTAAACAACTGCTAATT+TGG | - | chr8_1:76628337-76628356 | Msa1215390:intron | 20.0% |
| !! | TGAAATTAAATATCATGTCT+TGG | - | chr8_1:76628501-76628520 | Msa1215390:intron | 20.0% |
| !! | ACTTATAAAAAGATACCAAT+GGG | + | chr8_1:76628699-76628718 | None:intergenic | 20.0% |
| !! | TGAATACATTTATAATCGAA+GGG | + | chr8_1:76628808-76628827 | None:intergenic | 20.0% |
| !! | TTGAATACATTTATAATCGA+AGG | + | chr8_1:76628809-76628828 | None:intergenic | 20.0% |
| !! | AGGGATATATTATTTGAAAA+AGG | - | chr8_1:76628871-76628890 | Msa1215390:intron | 20.0% |
| !! | TTGAATGATCCTTATAAATA+GGG | - | chr8_1:76628951-76628970 | Msa1215390:CDS | 20.0% |
| ! | ATTTGACCCATTAACATTAA+AGG | - | chr8_1:76623804-76623823 | Msa1215390:three_prime_UTR | 25.0% |
| ! | CGATTTCCTTTAATGTTAAT+GGG | + | chr8_1:76623813-76623832 | None:intergenic | 25.0% |
| ! | TCGATTTCCTTTAATGTTAA+TGG | + | chr8_1:76623814-76623833 | None:intergenic | 25.0% |
| !!! | ATTTTATTTTCTTCCTTCCT+TGG | + | chr8_1:76623890-76623909 | None:intergenic | 25.0% |
| ! | ATCAAAATCACGATCTATAA+GGG | + | chr8_1:76624132-76624151 | None:intergenic | 25.0% |
| ! | AATCAAAATCACGATCTATA+AGG | + | chr8_1:76624133-76624152 | None:intergenic | 25.0% |
| ! | AACAAGAAGAAGAAAAAAAG+AGG | + | chr8_1:76624276-76624295 | None:intergenic | 25.0% |
| ! | AAATAAAATAACCAGCAACA+AGG | + | chr8_1:76624397-76624416 | None:intergenic | 25.0% |
| !!! | TTGAAGTTGATAATTACGTT+TGG | + | chr8_1:76624472-76624491 | None:intergenic | 25.0% |
| ! | AATCATTGACAAATCAAAGA+TGG | + | chr8_1:76624530-76624549 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTTGAGTTTTTTC+AGG | - | chr8_1:76624555-76624574 | Msa1215390:intron | 25.0% |
| !!! | TTCTTTGGAGTTAATCTTAA+CGG | - | chr8_1:76624928-76624947 | Msa1215390:intron | 25.0% |
| ! | AAGAGAACACATAAATACTT+GGG | + | chr8_1:76625160-76625179 | None:intergenic | 25.0% |
| ! | ATTATCAAAGACACATAACT+GGG | - | chr8_1:76625259-76625278 | Msa1215390:intron | 25.0% |
| ! | AAGTCATTTAGTGAATACAT+TGG | + | chr8_1:76625340-76625359 | None:intergenic | 25.0% |
| ! | AATGTATTCACTAAATGACT+TGG | - | chr8_1:76625339-76625358 | Msa1215390:intron | 25.0% |
| ! | ACCTTAAAGTCAAATAAAAG+TGG | - | chr8_1:76625494-76625513 | Msa1215390:intron | 25.0% |
| ! | CCTTAAAGTCAAATAAAAGT+GGG | - | chr8_1:76625495-76625514 | Msa1215390:intron | 25.0% |
| ! | TGTTTCTTGGTATTTAAACA+AGG | + | chr8_1:76625634-76625653 | None:intergenic | 25.0% |
| ! | TATGTACTGCAATGTTTATA+TGG | - | chr8_1:76625654-76625673 | Msa1215390:intron | 25.0% |
| ! | AGTCAATAAACCAAATAGAA+TGG | + | chr8_1:76625767-76625786 | None:intergenic | 25.0% |
| ! | CATGAAGAACTCATTAATTA+TGG | - | chr8_1:76625864-76625883 | Msa1215390:intron | 25.0% |
| ! | TTATAACAAGATCAATGATG+GGG | + | chr8_1:76625963-76625982 | None:intergenic | 25.0% |
| ! | TACTAGTATGATATTACCAT+CGG | + | chr8_1:76626274-76626293 | None:intergenic | 25.0% |
| !! | AACTGTTAATATGGTTGATA+AGG | - | chr8_1:76626751-76626770 | Msa1215390:CDS | 25.0% |
| ! | CAATAGTCTCATATATACAT+CGG | + | chr8_1:76626815-76626834 | None:intergenic | 25.0% |
| ! | GTGAATTTAATAATAGAGAG+AGG | + | chr8_1:76626939-76626958 | None:intergenic | 25.0% |
| ! | ATCCTGAAATTTATGTTCTA+AGG | - | chr8_1:76626960-76626979 | Msa1215390:intron | 25.0% |
| ! | GTATCTAATAAAACAACTAG+TGG | - | chr8_1:76627326-76627345 | Msa1215390:intron | 25.0% |
| ! | TACACGGTAATATTAGTATT+TGG | - | chr8_1:76627351-76627370 | Msa1215390:intron | 25.0% |
| ! | ACACGGTAATATTAGTATTT+GGG | - | chr8_1:76627352-76627371 | Msa1215390:intron | 25.0% |
| ! | TTTGGCTATTGAATACAATA+AGG | - | chr8_1:76627614-76627633 | Msa1215390:intron | 25.0% |
| ! | GGTAATTAATACCAAAAACA+GGG | + | chr8_1:76627764-76627783 | None:intergenic | 25.0% |
| !!! | TTTTTGGTATTAATTACCGA+TGG | - | chr8_1:76627766-76627785 | Msa1215390:CDS | 25.0% |
| !! | TTTTGAATGTGCAAATTAAC+TGG | + | chr8_1:76627981-76628000 | None:intergenic | 25.0% |
| ! | TGACAAAGTAACATTTAGTT+TGG | + | chr8_1:76628129-76628148 | None:intergenic | 25.0% |
| ! | GGAAGAAATTAATGATGTAT+TGG | + | chr8_1:76628154-76628173 | None:intergenic | 25.0% |
| !!! | AATAAATTTGCTAATGGACA+TGG | + | chr8_1:76628290-76628309 | None:intergenic | 25.0% |
| !! | TTCTATTTTCTGCATTTTGT+TGG | - | chr8_1:76628434-76628453 | Msa1215390:intron | 25.0% |
| ! | ATACAATCTCTTGTAAATGT+TGG | - | chr8_1:76628533-76628552 | Msa1215390:intron | 25.0% |
| ! | CTTATAAAAAGATACCAATG+GGG | + | chr8_1:76628698-76628717 | None:intergenic | 25.0% |
| ! | GACTTATAAAAAGATACCAA+TGG | + | chr8_1:76628700-76628719 | None:intergenic | 25.0% |
| ! | TGATATACGTATGTGAAAAT+TGG | + | chr8_1:76628728-76628747 | None:intergenic | 25.0% |
| ! | CTATTTATAAGGATCATTCA+AGG | + | chr8_1:76628952-76628971 | None:intergenic | 25.0% |
| ! | CTTGAATGATCCTTATAAAT+AGG | - | chr8_1:76628950-76628969 | Msa1215390:CDS | 25.0% |
| ! | TTATTAGCACATATGATTTG+TGG | - | chr8_1:76629005-76629024 | Msa1215390:CDS | 25.0% |
| ! | ATTGTATTAGAGGCAAAAAA+TGG | + | chr8_1:76629279-76629298 | None:intergenic | 25.0% |
| !!! | ATTTTTTGCCTCTAATACAA+TGG | - | chr8_1:76629278-76629297 | Msa1215390:intron | 25.0% |
| ! | GAACAGAAAATTTGTATCAT+AGG | - | chr8_1:76629571-76629590 | Msa1215390:five_prime_UTR | 25.0% |
| !! | TTTTGAATAAATAGCAGATG+AGG | - | chr8_1:76629628-76629647 | Msa1215390:five_prime_UTR | 25.0% |
| ! | TTTGAATAAATAGCAGATGA+GGG | - | chr8_1:76629629-76629648 | Msa1215390:five_prime_UTR | 25.0% |
| !! | GACTTGACATATATTTTCAT+TGG | + | chr8_1:76629845-76629864 | None:intergenic | 25.0% |
| TTAAATAGAACCCCTATAAG+TGG | + | chr8_1:76623761-76623780 | None:intergenic | 30.0% | |
| AAATCGAACCTAAAATCTTG+AGG | - | chr8_1:76623827-76623846 | Msa1215390:three_prime_UTR | 30.0% | |
| CTTGGAGTCAAGATTAAATT+TGG | + | chr8_1:76623872-76623891 | None:intergenic | 30.0% | |
| CAAATTTAATCTTGACTCCA+AGG | - | chr8_1:76623870-76623889 | Msa1215390:three_prime_UTR | 30.0% | |
| ! | TTTTATTCATACCTTGTTGC+TGG | - | chr8_1:76624383-76624402 | Msa1215390:CDS | 30.0% |
| !!! | GTTGAGTTTTTTCAGGATTT+TGG | - | chr8_1:76624562-76624581 | Msa1215390:intron | 30.0% |
| CATTTCCACATAAACTTTGT+TGG | - | chr8_1:76624711-76624730 | Msa1215390:intron | 30.0% | |
| AACAACCAACAAAGTTTATG+TGG | + | chr8_1:76624719-76624738 | None:intergenic | 30.0% | |
| !! | GTTTATTGTTTTGTAGGAGT+TGG | - | chr8_1:76624777-76624796 | Msa1215390:intron | 30.0% |
| CAAAGAAGGAATCAAACATT+TGG | + | chr8_1:76624915-76624934 | None:intergenic | 30.0% | |
| CAAATGTTTGATTCCTTCTT+TGG | - | chr8_1:76624913-76624932 | Msa1215390:intron | 30.0% | |
| GTTAAGATTAACTCCAAAGA+AGG | + | chr8_1:76624929-76624948 | None:intergenic | 30.0% | |
| !! | TCTTTGGAGTTAATCTTAAC+GGG | - | chr8_1:76624929-76624948 | Msa1215390:intron | 30.0% |
| GAAGAGAACACATAAATACT+TGG | + | chr8_1:76625161-76625180 | None:intergenic | 30.0% | |
| GATTATCAAAGACACATAAC+TGG | - | chr8_1:76625258-76625277 | Msa1215390:intron | 30.0% | |
| !! | CCCACTTTTATTTGACTTTA+AGG | + | chr8_1:76625498-76625517 | None:intergenic | 30.0% |
| TTGCATGTGTGATGAATAAA+CGG | + | chr8_1:76625594-76625613 | None:intergenic | 30.0% | |
| ATTGCAGTACATATGTTTCT+TGG | + | chr8_1:76625647-76625666 | None:intergenic | 30.0% | |
| !! | TGTTTTTGTGCCATTCTATT+TGG | - | chr8_1:76625754-76625773 | Msa1215390:intron | 30.0% |
| ! | CTATTTGGTTTATTGACTAG+TGG | - | chr8_1:76625769-76625788 | Msa1215390:intron | 30.0% |
| !!! | TGACTAGTGGTTTTATCTAT+AGG | - | chr8_1:76625782-76625801 | Msa1215390:intron | 30.0% |
| ATGAGTTCTTCATGAAATGT+GGG | + | chr8_1:76625858-76625877 | None:intergenic | 30.0% | |
| AATGAGTTCTTCATGAAATG+TGG | + | chr8_1:76625859-76625878 | None:intergenic | 30.0% | |
| ! | TCGCAGTTATGCATTATTTT+TGG | - | chr8_1:76626058-76626077 | Msa1215390:intron | 30.0% |
| !!! | CAGTTATGCATTATTTTTGG+AGG | - | chr8_1:76626061-76626080 | Msa1215390:intron | 30.0% |
| !!! | ATGCATTATTTTTGGAGGAA+AGG | - | chr8_1:76626066-76626085 | Msa1215390:intron | 30.0% |
| ATTATGTGAATGTTATCCGA+TGG | - | chr8_1:76626255-76626274 | Msa1215390:intron | 30.0% | |
| GATGGTAATATCATACTAGT+AGG | - | chr8_1:76626273-76626292 | Msa1215390:intron | 30.0% | |
| TCATGCATGTTCTTTGAATA+AGG | - | chr8_1:76626333-76626352 | Msa1215390:intron | 30.0% | |
| TCTATGACAAAGTTCACAAT+TGG | + | chr8_1:76626367-76626386 | None:intergenic | 30.0% | |
| AATTGTGAACTTTGTCATAG+AGG | - | chr8_1:76626366-76626385 | Msa1215390:intron | 30.0% | |
| TAGTACAATATTAATGCTGC+TGG | + | chr8_1:76626523-76626542 | None:intergenic | 30.0% | |
| TAAATAAGTGACCTACCAAT+TGG | + | chr8_1:76626616-76626635 | None:intergenic | 30.0% | |
| AGCAACCTAATTGCAATATA+AGG | + | chr8_1:76626693-76626712 | None:intergenic | 30.0% | |
| ! | ATATTGCAATTAGGTTGCTT+CGG | - | chr8_1:76626694-76626713 | Msa1215390:intron | 30.0% |
| ATTTATCAAGCCATTAGTGA+TGG | - | chr8_1:76626728-76626747 | Msa1215390:CDS | 30.0% | |
| ATTAACAGTTCCATCACTAA+TGG | + | chr8_1:76626741-76626760 | None:intergenic | 30.0% | |
| ! | TAGTGATGGAACTGTTAATA+TGG | - | chr8_1:76626742-76626761 | Msa1215390:CDS | 30.0% |
| GTATATATCAAGAGCTTTCA+AGG | + | chr8_1:76626877-76626896 | None:intergenic | 30.0% | |
| AAGCTCTTGATATATACAGA+AGG | - | chr8_1:76626880-76626899 | Msa1215390:CDS | 30.0% | |
| AGCTCTTGATATATACAGAA+GGG | - | chr8_1:76626881-76626900 | Msa1215390:CDS | 30.0% | |
| TTGATATATACAGAAGGGTT+GGG | - | chr8_1:76626886-76626905 | Msa1215390:CDS | 30.0% | |
| CACCTTAGAACATAAATTTC+AGG | + | chr8_1:76626965-76626984 | None:intergenic | 30.0% | |
| !! | ATGTTCTAAGGTGCTTTATT+TGG | - | chr8_1:76626972-76626991 | Msa1215390:intron | 30.0% |
| !! | TGTTCTAAGGTGCTTTATTT+GGG | - | chr8_1:76626973-76626992 | Msa1215390:intron | 30.0% |
| ATATGCCGTAATCTTGATAT+TGG | - | chr8_1:76627028-76627047 | Msa1215390:CDS | 30.0% | |
| !! | AAAACAACTAGTGGATTACA+CGG | - | chr8_1:76627335-76627354 | Msa1215390:intron | 30.0% |
| CACGGTAATATTAGTATTTG+GGG | - | chr8_1:76627353-76627372 | Msa1215390:intron | 30.0% | |
| ! | TCAATAGCCAAAACTTCTTT+TGG | + | chr8_1:76627606-76627625 | None:intergenic | 30.0% |
| ACAGTAATTACCAAAAGTTC+AGG | + | chr8_1:76627726-76627745 | None:intergenic | 30.0% | |
| CGGTAATTAATACCAAAAAC+AGG | + | chr8_1:76627765-76627784 | None:intergenic | 30.0% | |
| TTCTAGTAGGCAAATCAAAA+TGG | + | chr8_1:76627841-76627860 | None:intergenic | 30.0% | |
| !! | TTGATTTGCCTACTAGAATA+TGG | - | chr8_1:76627843-76627862 | Msa1215390:intron | 30.0% |
| AACAATAGTAATTGGATCGT+TGG | - | chr8_1:76628007-76628026 | Msa1215390:intron | 30.0% | |
| ACAATAGTAATTGGATCGTT+GGG | - | chr8_1:76628008-76628027 | Msa1215390:intron | 30.0% | |
| CGCAAAAACGACTATTAATT+TGG | + | chr8_1:76628093-76628112 | None:intergenic | 30.0% | |
| AAACAACTGCTAATTTGGAA+TGG | - | chr8_1:76628342-76628361 | Msa1215390:intron | 30.0% | |
| CAGAAAATAGAAAATGATGC+TGG | + | chr8_1:76628426-76628445 | None:intergenic | 30.0% | |
| !! | ACAGTTTAGTAGTGTTGATT+AGG | - | chr8_1:76628851-76628870 | Msa1215390:intron | 30.0% |
| !! | CAGTTTAGTAGTGTTGATTA+GGG | - | chr8_1:76628852-76628871 | Msa1215390:intron | 30.0% |
| ATGATCCTTATAAATAGGGA+TGG | - | chr8_1:76628955-76628974 | Msa1215390:CDS | 30.0% | |
| TAGATGCATACACAAATTGA+GGG | + | chr8_1:76629043-76629062 | None:intergenic | 30.0% | |
| TTAGATGCATACACAAATTG+AGG | + | chr8_1:76629044-76629063 | None:intergenic | 30.0% | |
| AATAAGTGAGATGACCTATT+TGG | - | chr8_1:76629114-76629133 | Msa1215390:intron | 30.0% | |
| !! | ATGGATTATAGCTAGCATTT+TGG | + | chr8_1:76629209-76629228 | None:intergenic | 30.0% |
| AAAATGCTAGCTATAATCCA+TGG | - | chr8_1:76629208-76629227 | Msa1215390:intron | 30.0% | |
| AAATGCTAGCTATAATCCAT+GGG | - | chr8_1:76629209-76629228 | Msa1215390:intron | 30.0% | |
| TAAGGATTGTATGATTGAAC+AGG | + | chr8_1:76629471-76629490 | None:intergenic | 30.0% | |
| TGGATAAAGAGCAAAAAACA+TGG | - | chr8_1:76629517-76629536 | Msa1215390:five_prime_UTR | 30.0% | |
| AATTTCTCTCTAGCTATCTA+TGG | + | chr8_1:76629606-76629625 | None:intergenic | 30.0% | |
| ! | GAATTTCTTTTATCCCTGAT+TGG | - | chr8_1:76629701-76629720 | Msa1215390:five_prime_UTR | 30.0% |
| ! | GAAATTTGTTCCTGATGAAT+TGG | - | chr8_1:76629745-76629764 | Msa1215390:five_prime_UTR | 30.0% |
| GAAAACAATACCAATTCATC+AGG | + | chr8_1:76629758-76629777 | None:intergenic | 30.0% | |
| TAAGAACCAACTAATTCGAG+TGG | - | chr8_1:76623721-76623740 | Msa1215390:three_prime_UTR | 35.0% | |
| GTTAATCCACTCGAATTAGT+TGG | + | chr8_1:76623730-76623749 | None:intergenic | 35.0% | |
| !! | TTGGTTCGTCCTAATTTTCT+CGG | + | chr8_1:76623853-76623872 | None:intergenic | 35.0% |
| TTTAATCTTGACTCCAAGGA+AGG | - | chr8_1:76623874-76623893 | Msa1215390:three_prime_UTR | 35.0% | |
| GAGAGAGAGAAAAGAGAAAA+GGG | + | chr8_1:76624005-76624024 | None:intergenic | 35.0% | |
| AGAGAGAGAGAAAAGAGAAA+AGG | + | chr8_1:76624006-76624025 | None:intergenic | 35.0% | |
| AAAATCACGATCTATAAGGG+TGG | + | chr8_1:76624129-76624148 | None:intergenic | 35.0% | |
| TATGTTGAAGAAAGAAGACG+AGG | + | chr8_1:76624183-76624202 | None:intergenic | 35.0% | |
| !!! | AGGATTTTGGAATTGTGAGA+GGG | - | chr8_1:76624575-76624594 | Msa1215390:intron | 35.0% |
| !! | AACAGTTTGAGAAAAGCACT+TGG | - | chr8_1:76624621-76624640 | Msa1215390:intron | 35.0% |
| ACAAACAAATCGATGACGTA+GGG | + | chr8_1:76624971-76624990 | None:intergenic | 35.0% | |
| ATTGTATACGAGGGAATTGT+TGG | - | chr8_1:76625115-76625134 | Msa1215390:intron | 35.0% | |
| ACCTTGGCAAGAAAGAATAT+AGG | + | chr8_1:76625402-76625421 | None:intergenic | 35.0% | |
| ATGCAATGTTTCATCAACCT+TGG | + | chr8_1:76625418-76625437 | None:intergenic | 35.0% | |
| ATGAGTTATGCCAATGTTTG+TGG | - | chr8_1:76625454-76625473 | Msa1215390:intron | 35.0% | |
| GGTGAATTACATAATCGCAA+AGG | + | chr8_1:76625714-76625733 | None:intergenic | 35.0% | |
| TAGAAGTCATATGCTCAACA+TGG | - | chr8_1:76625893-76625912 | Msa1215390:intron | 35.0% | |
| !!! | ATTATTTTTGGAGGAAAGGC+TGG | - | chr8_1:76626070-76626089 | Msa1215390:intron | 35.0% |
| TGTGTTGAAGTATGACATTG+AGG | - | chr8_1:76626103-76626122 | Msa1215390:intron | 35.0% | |
| TAGTCTCATATATACATCGG+AGG | + | chr8_1:76626812-76626831 | None:intergenic | 35.0% | |
| !!! | GACAGTTTTTTGAGATGCAA+CGG | - | chr8_1:76626844-76626863 | Msa1215390:intron | 35.0% |
| !!! | ACAGTTTTTTGAGATGCAAC+GGG | - | chr8_1:76626845-76626864 | Msa1215390:intron | 35.0% |
| CTTGATATATACAGAAGGGT+TGG | - | chr8_1:76626885-76626904 | Msa1215390:CDS | 35.0% | |
| CACGTCCAATATCAAGATTA+CGG | + | chr8_1:76627036-76627055 | None:intergenic | 35.0% | |
| ATCTTTGACATAGTCTTCCA+TGG | + | chr8_1:76627206-76627225 | None:intergenic | 35.0% | |
| CAAAGGTTACAGAACAAAAC+AGG | + | chr8_1:76627281-76627300 | None:intergenic | 35.0% | |
| !! | GTTTTGTTCTGTAACCTTTG+TGG | - | chr8_1:76627281-76627300 | Msa1215390:intron | 35.0% |
| CTTCATACATAAAGCCACAA+AGG | + | chr8_1:76627298-76627317 | None:intergenic | 35.0% | |
| ATATCAAGTCCTGAAACAAC+TGG | + | chr8_1:76627442-76627461 | None:intergenic | 35.0% | |
| !! | AGCAGCAATTTTGTTGTCAA+CGG | + | chr8_1:76627583-76627602 | None:intergenic | 35.0% |
| GTAATTACCAAAAGTTCAGG+TGG | + | chr8_1:76627723-76627742 | None:intergenic | 35.0% | |
| GTTATATGCAAAGCAACCAT+CGG | + | chr8_1:76627785-76627804 | None:intergenic | 35.0% | |
| AGGATCATCCATATTCTAGT+AGG | + | chr8_1:76627854-76627873 | None:intergenic | 35.0% | |
| TGTCTTAACGCAAATGCAAA+AGG | + | chr8_1:76627947-76627966 | None:intergenic | 35.0% | |
| CAATAGTAATTGGATCGTTG+GGG | - | chr8_1:76628009-76628028 | Msa1215390:intron | 35.0% | |
| ! | CGACTATTAATTTGGAACGA+AGG | + | chr8_1:76628085-76628104 | None:intergenic | 35.0% |
| ACAAGAGATTGTATGAGTTG+AGG | + | chr8_1:76628527-76628546 | None:intergenic | 35.0% | |
| ! | GCTGTTTCAAATCATGCAAA+TGG | - | chr8_1:76628579-76628598 | Msa1215390:intron | 35.0% |
| ACGTATGTGAAAATTGGCAA+GGG | + | chr8_1:76628722-76628741 | None:intergenic | 35.0% | |
| TACGTATGTGAAAATTGGCA+AGG | + | chr8_1:76628723-76628742 | None:intergenic | 35.0% | |
| TCAACACTACTAAACTGTCT+TGG | + | chr8_1:76628849-76628868 | None:intergenic | 35.0% | |
| !! | GAAAGAGTGCTTATATTCAG+AGG | - | chr8_1:76628916-76628935 | Msa1215390:intron | 35.0% |
| ATCCTTATAAATAGGGATGG+AGG | - | chr8_1:76628958-76628977 | Msa1215390:CDS | 35.0% | |
| TCCTTATAAATAGGGATGGA+GGG | - | chr8_1:76628959-76628978 | Msa1215390:CDS | 35.0% | |
| AGATGACCTATTTGGTATTC+AGG | - | chr8_1:76629122-76629141 | Msa1215390:intron | 35.0% | |
| TTCTCAGTGCATCATCATAT+AGG | + | chr8_1:76629179-76629198 | None:intergenic | 35.0% | |
| AAAAATGGATCGTGCATTGT+CGG | + | chr8_1:76629264-76629283 | None:intergenic | 35.0% | |
| ! | ATTTGCAGATTGTTGTTGAG+GGG | + | chr8_1:76629394-76629413 | None:intergenic | 35.0% |
| ! | GATTTGCAGATTGTTGTTGA+GGG | + | chr8_1:76629395-76629414 | None:intergenic | 35.0% |
| ! | CAACAATCTGCAAATCCTTT+TGG | - | chr8_1:76629399-76629418 | Msa1215390:intron | 35.0% |
| CCATATTGAGGATTTCCAAA+AGG | + | chr8_1:76629417-76629436 | None:intergenic | 35.0% | |
| !! | CCTTTTGGAAATCCTCAATA+TGG | - | chr8_1:76629414-76629433 | Msa1215390:intron | 35.0% |
| CAATCATACAATCCTTACAC+AGG | - | chr8_1:76629474-76629493 | Msa1215390:five_prime_UTR | 35.0% | |
| CCACAAGAAATGTTTAGATG+AGG | + | chr8_1:76629500-76629519 | None:intergenic | 35.0% | |
| CCTCATCTAAACATTTCTTG+TGG | - | chr8_1:76629497-76629516 | Msa1215390:five_prime_UTR | 35.0% | |
| AAACATGGATACTCCACATT+TGG | - | chr8_1:76629532-76629551 | Msa1215390:five_prime_UTR | 35.0% | |
| ! | TAAATAGCAGATGAGGGTTT+TGG | - | chr8_1:76629635-76629654 | Msa1215390:five_prime_UTR | 35.0% |
| AACTGAGTAACTTTAGTGCA+AGG | - | chr8_1:76629869-76629888 | Msa1215390:five_prime_UTR | 35.0% | |
| ATAGAACCCCTATAAGTGGA+GGG | + | chr8_1:76623757-76623776 | None:intergenic | 40.0% | |
| AATAGAACCCCTATAAGTGG+AGG | + | chr8_1:76623758-76623777 | None:intergenic | 40.0% | |
| ! | TTTCTCGGCCTCAAGATTTT+AGG | + | chr8_1:76623838-76623857 | None:intergenic | 40.0% |
| ATCTTGAGGCCGAGAAAATT+AGG | - | chr8_1:76623841-76623860 | Msa1215390:three_prime_UTR | 40.0% | |
| !!! | CAGGATTTTGGAATTGTGAG+AGG | - | chr8_1:76624574-76624593 | Msa1215390:intron | 40.0% |
| !! | AAAAGCACTTGGAGCTCTTA+AGG | - | chr8_1:76624632-76624651 | Msa1215390:intron | 40.0% |
| TAAGGTCAACAGTGGTTACA+AGG | - | chr8_1:76624677-76624696 | Msa1215390:intron | 40.0% | |
| GAATGTGTTTCTCCTTAGCT+GGG | + | chr8_1:76624840-76624859 | None:intergenic | 40.0% | |
| GACAAACAAATCGATGACGT+AGG | + | chr8_1:76624972-76624991 | None:intergenic | 40.0% | |
| ! | TTGTCACATGTTCTGAACCA+AGG | - | chr8_1:76624987-76625006 | Msa1215390:intron | 40.0% |
| CATAATAAACGCGATGTCCT+TGG | + | chr8_1:76625007-76625026 | None:intergenic | 40.0% | |
| AGGGAATTGTTGGATACGTT+AGG | - | chr8_1:76625125-76625144 | Msa1215390:intron | 40.0% | |
| GGGAATTGTTGGATACGTTA+GGG | - | chr8_1:76625126-76625145 | Msa1215390:intron | 40.0% | |
| GCCTATATTCTTTCTTGCCA+AGG | - | chr8_1:76625398-76625417 | Msa1215390:intron | 40.0% | |
| GATGATCAAGCCACAAACAT+TGG | + | chr8_1:76625467-76625486 | None:intergenic | 40.0% | |
| ATTCACAAACACATGCTCAG+TGG | + | chr8_1:76625735-76625754 | None:intergenic | 40.0% | |
| AAAGATGACTCGAGTCCAAA+TGG | - | chr8_1:76625924-76625943 | Msa1215390:CDS | 40.0% | |
| GGATTAAGACAAGCACCATT+TGG | + | chr8_1:76625942-76625961 | None:intergenic | 40.0% | |
| ! | TTCGTGTTTTGTGTTCAGCA+TGG | - | chr8_1:76626018-76626037 | Msa1215390:CDS | 40.0% |
| ! | TCGTGTTTTGTGTTCAGCAT+GGG | - | chr8_1:76626019-76626038 | Msa1215390:CDS | 40.0% |
| AGCATGGGATTATTCTGCAT+GGG | - | chr8_1:76626034-76626053 | Msa1215390:intron | 40.0% | |
| GTCATAGAGGACCAAAGATT+TGG | - | chr8_1:76626379-76626398 | Msa1215390:CDS | 40.0% | |
| TTCGGCAGTATCCAAATCTT+TGG | + | chr8_1:76626393-76626412 | None:intergenic | 40.0% | |
| TAGAGAAGCTGTTGTAAAGC+TGG | + | chr8_1:76626431-76626450 | None:intergenic | 40.0% | |
| CAGCTTCTCTATCGAGTTAT+TGG | - | chr8_1:76626440-76626459 | Msa1215390:intron | 40.0% | |
| TTATTTACAGCTGCTCCTTG+TGG | + | chr8_1:76626572-76626591 | None:intergenic | 40.0% | |
| GATTCAGTTAGCACTCCAAT+TGG | - | chr8_1:76626598-76626617 | Msa1215390:CDS | 40.0% | |
| CGTAATCTTGATATTGGACG+TGG | - | chr8_1:76627034-76627053 | Msa1215390:CDS | 40.0% | |
| GAAGTTCATCAAAGTTGAGC+AGG | - | chr8_1:76627060-76627079 | Msa1215390:intron | 40.0% | |
| TTCATCAAAGTTGAGCAGGT+TGG | - | chr8_1:76627064-76627083 | Msa1215390:intron | 40.0% | |
| ! | TGGCTTGCATAAACGATGAT+GGG | + | chr8_1:76627186-76627205 | None:intergenic | 40.0% |
| ! | ATGGCTTGCATAAACGATGA+TGG | + | chr8_1:76627187-76627206 | None:intergenic | 40.0% |
| ATCATCGTTTATGCAAGCCA+TGG | - | chr8_1:76627186-76627205 | Msa1215390:CDS | 40.0% | |
| AGCAATAGTTCGAAAGGATC+AGG | - | chr8_1:76627237-76627256 | Msa1215390:intron | 40.0% | |
| ACATGGACAACAACTATGAG+CGG | + | chr8_1:76627399-76627418 | None:intergenic | 40.0% | |
| GGTGAAAGTGAAACAGTACA+TGG | + | chr8_1:76627416-76627435 | None:intergenic | 40.0% | |
| ! | TGCTGCTCCAAAAGAAGTTT+TGG | - | chr8_1:76627596-76627615 | Msa1215390:intron | 40.0% |
| CAATAAGGAACCAGAAGTGA+AGG | - | chr8_1:76627629-76627648 | Msa1215390:intron | 40.0% | |
| ATTACCAAAAGTTCAGGTGG+TGG | + | chr8_1:76627720-76627739 | None:intergenic | 40.0% | |
| !!! | TTCTTTTGGTGCCCTGTTTT+TGG | - | chr8_1:76627750-76627769 | Msa1215390:CDS | 40.0% |
| ATTGGAAGAGAAGAATGCCT+TGG | - | chr8_1:76627891-76627910 | Msa1215390:intron | 40.0% | |
| CAAAAGGCCAGAAAATTACC+GGG | + | chr8_1:76627931-76627950 | None:intergenic | 40.0% | |
| GCAAAAGGCCAGAAAATTAC+CGG | + | chr8_1:76627932-76627951 | None:intergenic | 40.0% | |
| ! | TAATTTGGAATGGAGCGAGT+AGG | - | chr8_1:76628352-76628371 | Msa1215390:CDS | 40.0% |
| ! | GCATGATTTGAAACAGCAGA+AGG | + | chr8_1:76628576-76628595 | None:intergenic | 40.0% |
| TTTCTTCTTCAATGCCCCAT+TGG | - | chr8_1:76628681-76628700 | Msa1215390:intron | 40.0% | |
| TCCCTCCATCCCTATTTATA+AGG | + | chr8_1:76628963-76628982 | None:intergenic | 40.0% | |
| TCAAGTATACGTGCAAGCAA+GGG | + | chr8_1:76629084-76629103 | None:intergenic | 40.0% | |
| ATCAAGTATACGTGCAAGCA+AGG | + | chr8_1:76629085-76629104 | None:intergenic | 40.0% | |
| GATACATGAAAGACTGTTGC+TGG | + | chr8_1:76629341-76629360 | None:intergenic | 40.0% | |
| ! | GCAGCAACAAATGATGATGA+TGG | - | chr8_1:76629368-76629387 | Msa1215390:intron | 40.0% |
| ! | GGATTTGCAGATTGTTGTTG+AGG | + | chr8_1:76629396-76629415 | None:intergenic | 40.0% |
| GCGTTAACAGTAACCAATCA+GGG | + | chr8_1:76629717-76629736 | None:intergenic | 40.0% | |
| TGCGTTAACAGTAACCAATC+AGG | + | chr8_1:76629718-76629737 | None:intergenic | 40.0% | |
| GTTACTGTTAACGCATTAGC+AGG | - | chr8_1:76629723-76629742 | Msa1215390:five_prime_UTR | 40.0% | |
| TATACTTCCCACCATGTACA+GGG | + | chr8_1:76629791-76629810 | None:intergenic | 40.0% | |
| ATATACTTCCCACCATGTAC+AGG | + | chr8_1:76629792-76629811 | None:intergenic | 40.0% | |
| TATGAGCTGCTTGCTTCGTT+TGG | + | chr8_1:76623951-76623970 | None:intergenic | 45.0% | |
| TGTGAGAGGGAGAATATGTC+TGG | - | chr8_1:76624588-76624607 | Msa1215390:intron | 45.0% | |
| CTTAGCCAATGAGACAGTAG+TGG | + | chr8_1:76624661-76624680 | None:intergenic | 45.0% | |
| ! | CACTACTGTCTCATTGGCTA+AGG | - | chr8_1:76624659-76624678 | Msa1215390:intron | 45.0% |
| ! | TCATTGGCTAAGGTCAACAG+TGG | - | chr8_1:76624669-76624688 | Msa1215390:intron | 45.0% |
| CGAATGTGTTTCTCCTTAGC+TGG | + | chr8_1:76624841-76624860 | None:intergenic | 45.0% | |
| GCTAAGGAGAAACACATTCG+AGG | - | chr8_1:76624841-76624860 | Msa1215390:intron | 45.0% | |
| GATCTCAGCTACAAGACCTA+GGG | - | chr8_1:76625199-76625218 | Msa1215390:intron | 45.0% | |
| CAGCATGGGATTATTCTGCA+TGG | - | chr8_1:76626033-76626052 | Msa1215390:CDS | 45.0% | |
| TGGCAACTGCTCTAGCAATT+CGG | + | chr8_1:76626411-76626430 | None:intergenic | 45.0% | |
| ! | CTATCGAGTTATTGGTTGCC+AGG | - | chr8_1:76626448-76626467 | Msa1215390:intron | 45.0% |
| AGTTGGATCAAAAGCTCACC+TGG | + | chr8_1:76626469-76626488 | None:intergenic | 45.0% | |
| CAGTTAGCACTCCAATTGGT+AGG | - | chr8_1:76626602-76626621 | Msa1215390:CDS | 45.0% | |
| !! | AAGGTGCTTTATTTGGGTCC+AGG | - | chr8_1:76626979-76626998 | Msa1215390:intron | 45.0% |
| ! | GCTTGCATAAACGATGATGG+GGG | + | chr8_1:76627184-76627203 | None:intergenic | 45.0% |
| GGCTTGCATAAACGATGATG+GGG | + | chr8_1:76627185-76627204 | None:intergenic | 45.0% | |
| TATGTCAAAGATGCTCCCCA+GGG | - | chr8_1:76627214-76627233 | Msa1215390:CDS | 45.0% | |
| TTTCGAACTATTGCTCCCTG+GGG | + | chr8_1:76627232-76627251 | None:intergenic | 45.0% | |
| CTTTCGAACTATTGCTCCCT+GGG | + | chr8_1:76627233-76627252 | None:intergenic | 45.0% | |
| ! | TTCACCTCTCCAGTTGTTTC+AGG | - | chr8_1:76627430-76627449 | Msa1215390:intron | 45.0% |
| AAGTCCTGAAACAACTGGAG+AGG | + | chr8_1:76627437-76627456 | None:intergenic | 45.0% | |
| TAAGGAACCAGAAGTGAAGG+AGG | - | chr8_1:76627632-76627651 | Msa1215390:intron | 45.0% | |
| ! | ACAACCACCACCTGAACTTT+TGG | - | chr8_1:76627713-76627732 | Msa1215390:CDS | 45.0% |
| CAGAAAATTACCGGGAACGA+TGG | + | chr8_1:76627923-76627942 | None:intergenic | 45.0% | |
| ! | CATCGTTCCCGGTAATTTTC+TGG | - | chr8_1:76627921-76627940 | Msa1215390:intron | 45.0% |
| AATCATGCAAATGGAACCGC+TGG | - | chr8_1:76628588-76628607 | Msa1215390:intron | 45.0% | |
| ATCATGCAAATGGAACCGCT+GGG | - | chr8_1:76628589-76628608 | Msa1215390:intron | 45.0% | |
| GCAGCACTTTCATTTGAGCT+AGG | + | chr8_1:76628639-76628658 | None:intergenic | 45.0% | |
| CAGCAGCTAGCAAATTGGTA+TGG | - | chr8_1:76628658-76628677 | Msa1215390:intron | 45.0% | |
| GCAAGCAAGGGTAATGATTG+TGG | + | chr8_1:76629072-76629091 | None:intergenic | 45.0% | |
| GACCTATTTGGTATTCAGGC+TGG | - | chr8_1:76629126-76629145 | Msa1215390:intron | 45.0% | |
| CTCCAGCCTGAATACCAAAT+AGG | + | chr8_1:76629131-76629150 | None:intergenic | 45.0% | |
| CTATTTGGTATTCAGGCTGG+AGG | - | chr8_1:76629129-76629148 | Msa1215390:intron | 45.0% | |
| TGGAGCAGCCATTGTATTAG+AGG | + | chr8_1:76629289-76629308 | None:intergenic | 45.0% | |
| TGCTCCACACTCTGTTCAAA+TGG | - | chr8_1:76629302-76629321 | Msa1215390:intron | 45.0% | |
| TGAACTGTGGCTCCATATTG+AGG | + | chr8_1:76629429-76629448 | None:intergenic | 45.0% | |
| GTTTAGATGAGGCCTGTGTA+AGG | + | chr8_1:76629489-76629508 | None:intergenic | 45.0% | |
| TCCACATTTGGTTGTATGCG+TGG | - | chr8_1:76629544-76629563 | Msa1215390:five_prime_UTR | 45.0% | |
| CCACATTTGGTTGTATGCGT+GGG | - | chr8_1:76629545-76629564 | Msa1215390:five_prime_UTR | 45.0% | |
| TCTAGCTATCTATGGCACAC+AGG | + | chr8_1:76629598-76629617 | None:intergenic | 45.0% | |
| CAGTTTCCATTCCCTGTACA+TGG | - | chr8_1:76629777-76629796 | Msa1215390:five_prime_UTR | 45.0% | |
| TTTCCATTCCCTGTACATGG+TGG | - | chr8_1:76629780-76629799 | Msa1215390:five_prime_UTR | 45.0% | |
| TTCCATTCCCTGTACATGGT+GGG | - | chr8_1:76629781-76629800 | Msa1215390:five_prime_UTR | 45.0% | |
| TAACCCCACCCTCCACTTAT+AGG | - | chr8_1:76623746-76623765 | Msa1215390:three_prime_UTR | 50.0% | |
| AACCCCACCCTCCACTTATA+GGG | - | chr8_1:76623747-76623766 | Msa1215390:three_prime_UTR | 50.0% | |
| AACCCCTATAAGTGGAGGGT+GGG | + | chr8_1:76623753-76623772 | None:intergenic | 50.0% | |
| ! | TGCTTCGTTTGGTTGGTCGT+CGG | + | chr8_1:76623940-76623959 | None:intergenic | 50.0% |
| AGCTGCTTGCTTCGTTTGGT+TGG | + | chr8_1:76623947-76623966 | None:intergenic | 50.0% | |
| GAGAGGGAGAATATGTCTGG+TGG | - | chr8_1:76624591-76624610 | Msa1215390:intron | 50.0% | |
| GGACACCACTACTGTCTCAT+TGG | - | chr8_1:76624653-76624672 | Msa1215390:intron | 50.0% | |
| TCATGTTGAACGCCCAGCTA+AGG | - | chr8_1:76624825-76624844 | Msa1215390:intron | 50.0% | |
| CGATCTCAGCTACAAGACCT+AGG | - | chr8_1:76625198-76625217 | Msa1215390:intron | 50.0% | |
| ! | AGCGAGAGCATGGATGCAAT+AGG | + | chr8_1:76625234-76625253 | None:intergenic | 50.0% |
| ATTGCATCCATGCTCTCGCT+AGG | - | chr8_1:76625234-76625253 | Msa1215390:intron | 50.0% | |
| ATAATCGCCTAGCGAGAGCA+TGG | + | chr8_1:76625244-76625263 | None:intergenic | 50.0% | |
| TTGTCATTCACCGTGCTCTG+AGG | - | chr8_1:76625823-76625842 | Msa1215390:intron | 50.0% | |
| TGTCATTCACCGTGCTCTGA+GGG | - | chr8_1:76625824-76625843 | Msa1215390:intron | 50.0% | |
| TTTCGTATGCTGCAGCCACA+AGG | - | chr8_1:76626554-76626573 | Msa1215390:CDS | 50.0% | |
| CTATGTCAAAGATGCTCCCC+AGG | - | chr8_1:76627213-76627232 | Msa1215390:CDS | 50.0% | |
| CCTTTCGAACTATTGCTCCC+TGG | + | chr8_1:76627234-76627253 | None:intergenic | 50.0% | |
| CCAGGGAGCAATAGTTCGAA+AGG | - | chr8_1:76627231-76627250 | Msa1215390:intron | 50.0% | |
| ! | AGTTCAGGTGGTGGTTGTAC+TGG | + | chr8_1:76627711-76627730 | None:intergenic | 50.0% |
| AATTCTGCAGCAGCTGGAAC+AGG | + | chr8_1:76627874-76627893 | None:intergenic | 50.0% | |
| TGTTCCAGCTGCTGCAGAAT+TGG | - | chr8_1:76627873-76627892 | Msa1215390:intron | 50.0% | |
| TCTTCCAATTCTGCAGCAGC+TGG | + | chr8_1:76627880-76627899 | None:intergenic | 50.0% | |
| !! | TTGGCTTTAGCCATCGTTCC+CGG | - | chr8_1:76627910-76627929 | Msa1215390:intron | 50.0% |
| TGCATGTTTGACGATGTCGC+TGG | + | chr8_1:76628233-76628252 | None:intergenic | 50.0% | |
| TGCTGCAGCAGCTAGCAAAT+TGG | - | chr8_1:76628653-76628672 | Msa1215390:intron | 50.0% | |
| TGGTATTCAGGCTGGAGGTT+TGG | - | chr8_1:76629134-76629153 | Msa1215390:intron | 50.0% | |
| TAATCCATGGGAGCAAGCAC+CGG | - | chr8_1:76629221-76629240 | Msa1215390:intron | 50.0% | |
| ! | GCTGCCATTTGAACAGAGTG+TGG | + | chr8_1:76629309-76629328 | None:intergenic | 50.0% |
| ACAGGCATACCTGAGCCATA+GGG | + | chr8_1:76629453-76629472 | None:intergenic | 50.0% | |
| AACAGGCATACCTGAGCCAT+AGG | + | chr8_1:76629454-76629473 | None:intergenic | 50.0% | |
| CCCACGCATACAACCAAATG+TGG | + | chr8_1:76629548-76629567 | None:intergenic | 50.0% | |
| TTCCCACCATGTACAGGGAA+TGG | + | chr8_1:76629786-76629805 | None:intergenic | 50.0% | |
| ACCCCACCCTCCACTTATAG+GGG | - | chr8_1:76623748-76623767 | Msa1215390:three_prime_UTR | 55.0% | |
| ACCCCTATAAGTGGAGGGTG+GGG | + | chr8_1:76623752-76623771 | None:intergenic | 55.0% | |
| GAACCCCTATAAGTGGAGGG+TGG | + | chr8_1:76623754-76623773 | None:intergenic | 55.0% | |
| CAATAGGCAACGTCAGCCCT+AGG | + | chr8_1:76625218-76625237 | None:intergenic | 55.0% | |
| ATACAGAAGGGTTGGGCTGC+AGG | - | chr8_1:76626893-76626912 | Msa1215390:CDS | 55.0% | |
| ACTCTGACAGTCTCTCAGCC+TGG | + | chr8_1:76627000-76627019 | None:intergenic | 55.0% | |
| GCACGTTCCTCCTTCACTTC+TGG | + | chr8_1:76627642-76627661 | None:intergenic | 55.0% | |
| TCACAGGTTCAGACGGTGGA+GGG | + | chr8_1:76627674-76627693 | None:intergenic | 55.0% | |
| TTCACAGGTTCAGACGGTGG+AGG | + | chr8_1:76627675-76627694 | None:intergenic | 55.0% | |
| ! | TCAGGTGGTGGTTGTACTGG+TGG | + | chr8_1:76627708-76627727 | None:intergenic | 55.0% |
| GGGAACGATGGCTAAAGCCA+AGG | + | chr8_1:76627911-76627930 | None:intergenic | 55.0% | |
| ATGCAAATGGAACCGCTGGG+TGG | - | chr8_1:76628592-76628611 | Msa1215390:intron | 55.0% | |
| TGCAAATGGAACCGCTGGGT+GGG | - | chr8_1:76628593-76628612 | Msa1215390:intron | 55.0% | |
| AAGAGCCAATTCCCACCCAG+CGG | + | chr8_1:76628607-76628626 | None:intergenic | 55.0% | |
| TGAGCCATAGGGGTGAACTG+TGG | + | chr8_1:76629442-76629461 | None:intergenic | 55.0% | |
| ACAGTTCACCCCTATGGCTC+AGG | - | chr8_1:76629441-76629460 | Msa1215390:five_prime_UTR | 55.0% | |
| CAGGCATACCTGAGCCATAG+GGG | + | chr8_1:76629452-76629471 | None:intergenic | 55.0% | |
| !! | CATTCACCGTGCTCTGAGGG+AGG | - | chr8_1:76625827-76625846 | Msa1215390:intron | 60.0% |
| GATCCACCTCCCTCAGAGCA+CGG | + | chr8_1:76625836-76625855 | None:intergenic | 60.0% | |
| ACAGGTTCAGACGGTGGAGG+GGG | + | chr8_1:76627672-76627691 | None:intergenic | 60.0% | |
| CACAGGTTCAGACGGTGGAG+GGG | + | chr8_1:76627673-76627692 | None:intergenic | 60.0% | |
| TGGAACCGCTGGGTGGGAAT+TGG | - | chr8_1:76628599-76628618 | Msa1215390:intron | 60.0% | |
| GGTTGCATCATGCCTCCAGC+CGG | + | chr8_1:76629243-76629262 | None:intergenic | 60.0% | |
| GGAGCCACAGTTCACCCCTA+TGG | - | chr8_1:76629435-76629454 | Msa1215390:five_prime_UTR | 60.0% | |
| !! | TCACCGTGCTCTGAGGGAGG+TGG | - | chr8_1:76625830-76625849 | Msa1215390:intron | 65.0% |
| TCAGACGGTGGAGGGGGCGA+GGG | + | chr8_1:76627666-76627685 | None:intergenic | 70.0% | |
| TTCAGACGGTGGAGGGGGCG+AGG | + | chr8_1:76627667-76627686 | None:intergenic | 70.0% | |
| CCAGCCGGTGCTTGCTCCCA+TGG | + | chr8_1:76629228-76629247 | None:intergenic | 70.0% | |
| !! | CCATGGGAGCAAGCACCGGC+TGG | - | chr8_1:76629225-76629244 | Msa1215390:intron | 70.0% |
| !! | TGGGAGCAAGCACCGGCTGG+AGG | - | chr8_1:76629228-76629247 | Msa1215390:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 76623696 | 76629935 | 76623696 | ID=Msa1215390;Name=Msa1215390 |
| chr8_1 | mRNA | 76623696 | 76629935 | 76623696 | ID=Msa1215390-mRNA-1;Parent=Msa1215390;Name=Msa1215390-mRNA-1;_AED=0.11;_eAED=0.11;_QI=538|0.81|0.88|1|0.93|0.94|17|429|545 |
| chr8_1 | exon | 76623696 | 76624487 | 76623696 | ID=Msa1215390-mRNA-1:exon:26349;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76625005 | 76625069 | 76625005 | ID=Msa1215390-mRNA-1:exon:26348;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76625700 | 76625772 | 76625700 | ID=Msa1215390-mRNA-1:exon:26347;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76625897 | 76626052 | 76625897 | ID=Msa1215390-mRNA-1:exon:26346;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76626373 | 76626450 | 76626373 | ID=Msa1215390-mRNA-1:exon:26345;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76626550 | 76626630 | 76626550 | ID=Msa1215390-mRNA-1:exon:26344;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76626717 | 76626782 | 76626717 | ID=Msa1215390-mRNA-1:exon:26343;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76626859 | 76626924 | 76626859 | ID=Msa1215390-mRNA-1:exon:26342;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76627012 | 76627062 | 76627012 | ID=Msa1215390-mRNA-1:exon:26341;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76627162 | 76627245 | 76627162 | ID=Msa1215390-mRNA-1:exon:26340;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76627355 | 76627402 | 76627355 | ID=Msa1215390-mRNA-1:exon:26339;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76627495 | 76627595 | 76627495 | ID=Msa1215390-mRNA-1:exon:26338;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76627686 | 76627827 | 76627686 | ID=Msa1215390-mRNA-1:exon:26337;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76628348 | 76628445 | 76628348 | ID=Msa1215390-mRNA-1:exon:26336;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76628769 | 76628838 | 76628769 | ID=Msa1215390-mRNA-1:exon:26335;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76628933 | 76629054 | 76628933 | ID=Msa1215390-mRNA-1:exon:26334;Parent=Msa1215390-mRNA-1 |
| chr8_1 | exon | 76629424 | 76629935 | 76629424 | ID=Msa1215390-mRNA-1:exon:26333;Parent=Msa1215390-mRNA-1 |
| chr8_1 | five_prime_UTR | 76629424 | 76629935 | 76629424 | ID=Msa1215390-mRNA-1:five_prime_utr;Parent=Msa1215390-mRNA-1 |
| chr8_1 | five_prime_UTR | 76629029 | 76629054 | 76629029 | ID=Msa1215390-mRNA-1:five_prime_utr;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76628933 | 76629028 | 76628933 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76628769 | 76628838 | 76628769 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76628348 | 76628445 | 76628348 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76627686 | 76627827 | 76627686 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76627495 | 76627595 | 76627495 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76627355 | 76627402 | 76627355 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76627162 | 76627245 | 76627162 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76627012 | 76627062 | 76627012 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76626859 | 76626924 | 76626859 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76626717 | 76626782 | 76626717 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76626550 | 76626630 | 76626550 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76626373 | 76626450 | 76626373 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76625897 | 76626052 | 76625897 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76625700 | 76625772 | 76625700 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76625005 | 76625069 | 76625005 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | CDS | 76624125 | 76624487 | 76624125 | ID=Msa1215390-mRNA-1:cds;Parent=Msa1215390-mRNA-1 |
| chr8_1 | three_prime_UTR | 76623696 | 76624124 | 76623696 | ID=Msa1215390-mRNA-1:three_prime_utr;Parent=Msa1215390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
