AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1070800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1070800 MtrunA17_Chr7g0253311 99.513 411 2 0 1 411 1 411 0.0 846
Msa1070800 MtrunA17_Chr6g0461461 90.754 411 38 0 1 411 1 411 0.0 788
Msa1070800 MtrunA17_Chr5g0399821 80.049 411 82 0 1 411 1 411 0.0 701
Msa1070800 MtrunA17_Chr4g0055521 80.292 411 81 0 1 411 1 411 0.0 699
Msa1070800 MtrunA17_Chr8g0341541 26.810 373 260 3 16 375 224 596 5.93e-35 136
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1070800 AT5G18170.1 89.294 411 44 0 1 411 1 411 0.0 775
Msa1070800 AT3G03910.1 86.797 409 54 0 1 409 1 409 0.0 759
Msa1070800 AT5G07440.2 80.779 411 79 0 1 411 1 411 0.0 708
Msa1070800 AT5G07440.1 80.779 411 79 0 1 411 1 411 0.0 708
Msa1070800 AT3G03910.2 88.000 350 42 0 1 350 1 350 0.0 649
Msa1070800 AT5G07440.3 80.405 296 58 0 1 296 1 296 2.93e-180 504
Msa1070800 AT1G51720.1 28.333 360 248 4 26 375 237 596 1.50e-34 135
Msa1070800 AT1G51720.3 28.333 360 248 4 26 375 237 596 1.50e-34 135
Msa1070800 AT1G51720.2 28.981 314 213 4 26 329 237 550 3.93e-33 131
Msa1070800 AT1G51720.4 30.332 211 147 0 26 236 237 447 4.89e-24 104

Find 130 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGTTGGCTTCTAGGCTTT+TGG 0.210460 7_2:+67097438 Msa1070800:CDS
GCATTTCCCTCTACATTTCT+TGG 0.220029 7_2:+67094681 Msa1070800:five_prime_UTR
AAAGTTTACTCATTCCATTT+AGG 0.224265 7_2:+67097482 Msa1070800:CDS
TTTACCTTGATTTCCCTAAA+TGG 0.227128 7_2:-67097496 None:intergenic
CAGAAAATTCATGATCTAAT+TGG 0.230295 7_2:+67098182 Msa1070800:CDS
GAGGCTTTGCTTAATGAGTA+TGG 0.240150 7_2:+67098626 Msa1070800:CDS
TGCAACGTGCCGTCATCTTT+TGG 0.259995 7_2:-67097644 None:intergenic
CCAGACATTTATGCAAATTC+AGG 0.267573 7_2:+67099344 Msa1070800:CDS
TGTGTATTTGTTCAGGGTTT+TGG 0.276809 7_2:+67098753 Msa1070800:intron
AGGGTTCCATGTACTATTCT+TGG 0.286689 7_2:+67100009 Msa1070800:three_prime_UTR
TCAGGTTCTTCTGGTTGGTT+AGG 0.288140 7_2:+67097378 Msa1070800:intron
AAGTTTACTCATTCCATTTA+GGG 0.289477 7_2:+67097483 Msa1070800:CDS
GGCACGTTGCAATCTTATAT+TGG 0.290304 7_2:+67097656 Msa1070800:CDS
GGATGTTCCTGCACCTGATA+TGG 0.292182 7_2:+67098214 Msa1070800:CDS
AAAGAGCAGAAAGGAGTAAA+AGG 0.295634 7_2:+67098903 Msa1070800:CDS
TGGACAACGGTTCGTCATTC+AGG 0.296438 7_2:+67098661 Msa1070800:CDS
AATATTGTGTCAGGTTCTTC+TGG 0.303732 7_2:+67097369 Msa1070800:intron
AGGCGAGTAGCCGTGAAATT+TGG 0.313243 7_2:-67098421 None:intergenic
GGAAAATGCAAATGAAATTA+AGG 0.319621 7_2:+67099145 Msa1070800:CDS
CGAATGGGAGCCTTCAGTTT+GGG 0.326363 7_2:+67099798 Msa1070800:CDS
TGTGGTCCTGTTCCCATATC+AGG 0.339231 7_2:-67098227 None:intergenic
GTATCTGATCCCTCCTTTCA+TGG 0.345021 7_2:-67097711 None:intergenic
GAGTATGGGAAGAGTTTATC+TGG 0.356117 7_2:+67098641 Msa1070800:CDS
CCTGAATTTGCATAAATGTC+TGG 0.369176 7_2:-67099344 None:intergenic
TAGCTACTTTGAGTGGGTTC+AGG 0.371393 7_2:+67099379 Msa1070800:CDS
CTCAAGCTTCCCAACCTCTA+AGG 0.378052 7_2:-67099848 None:intergenic
CCTTTGTCAAACTAGGATCT+TGG 0.397168 7_2:+67098551 Msa1070800:intron
TCACATTGCTTTGTTAAGCT+TGG 0.398720 7_2:+67094654 Msa1070800:five_prime_UTR
GAGATCTTGCCGTTGCTGCT+TGG 0.411413 7_2:+67099868 Msa1070800:exon
GCAAGGGCCACTGTCCTTAG+AGG 0.412164 7_2:+67099834 Msa1070800:CDS
ATCAGGGTCAGTTGGGTGAT+TGG 0.414618 7_2:-67099189 None:intergenic
CACAATTAATTGATGAGAAA+GGG 0.415300 7_2:+67098796 Msa1070800:CDS
GATGAATATTCCAAATTTCA+CGG 0.417046 7_2:+67098411 Msa1070800:CDS
CAGGTTCTTCTGGTTGGTTA+GGG 0.418686 7_2:+67097379 Msa1070800:intron
AAACCAACCTCATCAGCATC+AGG 0.420307 7_2:-67099206 None:intergenic
GCTAAAGCATTCACTTCATC+TGG 0.423121 7_2:-67098035 None:intergenic
TCTTCAAGTCATTATTGTAA+TGG 0.424156 7_2:+67094324 Msa1070800:five_prime_UTR
TCGAATGGGAGCCTTCAGTT+TGG 0.426674 7_2:+67099797 Msa1070800:CDS
ATTCTAAATCATTAAGCAAA+TGG 0.428695 7_2:-67100041 None:intergenic
GTTGCTGTTAGTGACATAAC+TGG 0.429636 7_2:+67098828 Msa1070800:CDS
TATCTGATCCCTCCTTTCAT+GGG 0.433194 7_2:-67097710 None:intergenic
GTCATTATTGTAATGGTTGA+AGG 0.435906 7_2:+67094331 Msa1070800:five_prime_UTR
TTGGTATGCTTGAGTAGGCT+AGG 0.438375 7_2:-67098882 None:intergenic
CCTCCTTTGGCACCACCATA+TGG 0.438942 7_2:-67098095 None:intergenic
AGGAGTCATGTTTGCAGCAG+AGG 0.444045 7_2:+67098607 Msa1070800:CDS
GTTACACCCTATCCCTCCTT+TGG 0.445729 7_2:-67098108 None:intergenic
CTAGGTAGAGACGCAGCTAC+AGG 0.452561 7_2:+67098581 Msa1070800:CDS
CATTCCATTTAGGGAAATCA+AGG 0.454849 7_2:+67097492 Msa1070800:CDS
GGTGGTGCCAAAGGAGGGAT+AGG 0.455169 7_2:+67098101 Msa1070800:CDS
GGCCACTGTCCTTAGAGGTT+GGG 0.464668 7_2:+67099839 Msa1070800:CDS
AATGCTTAATACTACGAACT+TGG 0.469726 7_2:+67100110 Msa1070800:three_prime_UTR
CCTGCACCTGATATGGGAAC+AGG 0.473655 7_2:+67098221 Msa1070800:CDS
GCTCTTTGGTATGCTTGAGT+AGG 0.477879 7_2:-67098887 None:intergenic
GCACAATTAATTGATGAGAA+AGG 0.478092 7_2:+67098795 Msa1070800:CDS
TAGGATCTTGGTGGATCTCT+AGG 0.481482 7_2:+67098563 Msa1070800:intron
AGAACATCCAAGGGTTTATG+TGG 0.484407 7_2:+67099682 Msa1070800:intron
TTGTGTCAGGTTCTTCTGGT+TGG 0.484809 7_2:+67097373 Msa1070800:intron
CATCAGCATCAGGGTCAGTT+GGG 0.486837 7_2:-67099196 None:intergenic
TGGTATGCTTGAGTAGGCTA+GGG 0.498740 7_2:-67098881 None:intergenic
TTTAATCCCAGCAGCTCTTG+GGG 0.499316 7_2:+67098983 Msa1070800:CDS
ATGCACTAGCAGCTACAAAC+AGG 0.499625 7_2:+67097410 Msa1070800:CDS
TCATCAGCATCAGGGTCAGT+TGG 0.504130 7_2:-67099197 None:intergenic
TTACAGTTAGCTACTTTGAG+TGG 0.504316 7_2:+67099372 Msa1070800:CDS
AAAATTAGCAAAGGAAAATG+TGG 0.504492 7_2:-67094262 None:intergenic
TTTATCACTGATTAAAGATG+AGG 0.512041 7_2:+67099989 Msa1070800:three_prime_UTR
GCTGTAGCAAATATACCATA+TGG 0.512729 7_2:+67098080 Msa1070800:CDS
TCAGATATACTTAATTCTGA+AGG 0.513027 7_2:-67098131 None:intergenic
TACAGTTAGCTACTTTGAGT+GGG 0.513952 7_2:+67099373 Msa1070800:CDS
TGCATAGCTGCAGCCTGCAG+AGG 0.514289 7_2:-67100135 None:intergenic
GGGCCACTGTCCTTAGAGGT+TGG 0.521012 7_2:+67099838 Msa1070800:CDS
TTGTCAAACTAGGATCTTGG+TGG 0.524001 7_2:+67098554 Msa1070800:intron
CTGAATTTGCATAAATGTCT+GGG 0.526336 7_2:-67099343 None:intergenic
AGAGACGCAGCTACAGGAAG+AGG 0.528132 7_2:+67098587 Msa1070800:CDS
CCTCATCCCACATAAACCCT+TGG 0.528763 7_2:-67099689 None:intergenic
AGCAATGTGAAACAAGTGAA+TGG 0.530486 7_2:-67094641 None:intergenic
TACGAACTTGGATCCTCTGC+AGG 0.530748 7_2:+67100122 Msa1070800:three_prime_UTR
TACTCGCCTGCAGTAGTGAC+TGG 0.531361 7_2:+67098435 Msa1070800:CDS
GATGTTCCTGCACCTGATAT+GGG 0.534015 7_2:+67098215 Msa1070800:CDS
CATGAATGTGATCTTCGAAT+GGG 0.534362 7_2:+67099783 Msa1070800:CDS
CCTGTTCCCATATCAGGTGC+AGG 0.535228 7_2:-67098221 None:intergenic
CTTTAGCGCAACTAATGACA+TGG 0.539793 7_2:+67098051 Msa1070800:CDS
AGGCTTTGCTTAATGAGTAT+GGG 0.540014 7_2:+67098627 Msa1070800:CDS
TGGGAGTTAACCGTGTGGCA+AGG 0.543206 7_2:+67099817 Msa1070800:CDS
TCATGAATGTGATCTTCGAA+TGG 0.546441 7_2:+67099782 Msa1070800:CDS
GGGAGTTAACCGTGTGGCAA+GGG 0.549431 7_2:+67099818 Msa1070800:CDS
CAGATATACTTAATTCTGAA+GGG 0.559546 7_2:-67098130 None:intergenic
CCAAGGGTTTATGTGGGATG+AGG 0.562647 7_2:+67099689 Msa1070800:CDS
TGATATACACAGAACATCCA+AGG 0.564539 7_2:+67099672 Msa1070800:intron
AATGCTAGAGGCCCCATGAA+AGG 0.566074 7_2:+67097698 Msa1070800:CDS
CCATATGGTGGTGCCAAAGG+AGG 0.569654 7_2:+67098095 Msa1070800:CDS
AAACATACCAAGAAATGTAG+AGG 0.574650 7_2:-67094688 None:intergenic
TTATCACTGATTAAAGATGA+GGG 0.574898 7_2:+67099990 Msa1070800:three_prime_UTR
GTAGAGCATAAAATTAGCAA+AGG 0.574986 7_2:-67094271 None:intergenic
AACTGACCCTGATGCTGATG+AGG 0.577308 7_2:+67099199 Msa1070800:CDS
TTCATCTAGTATCCATGCCA+TGG 0.578541 7_2:-67098394 None:intergenic
AAGCATACCAAAGAGCAGAA+AGG 0.585412 7_2:+67098894 Msa1070800:CDS
ATACCATATGGTGGTGCCAA+AGG 0.586993 7_2:+67098092 Msa1070800:CDS
CATATGGTGGTGCCAAAGGA+GGG 0.588939 7_2:+67098096 Msa1070800:CDS
ACAATTAATTGATGAGAAAG+GGG 0.591091 7_2:+67098797 Msa1070800:CDS
AAAGGAGTAAAAGGATTCCA+TGG 0.591340 7_2:+67098912 Msa1070800:CDS
ATCTGATCCCTCCTTTCATG+GGG 0.594388 7_2:-67097709 None:intergenic
GACATTTATGCAAATTCAGG+AGG 0.596043 7_2:+67099347 Msa1070800:CDS
GCTAGAGGCCCCATGAAAGG+AGG 0.601353 7_2:+67097701 Msa1070800:CDS
AAATTAGCAAAGGAAAATGT+GGG 0.605601 7_2:-67094261 None:intergenic
GTTAATCCAAGAATAGTACA+TGG 0.612249 7_2:-67100015 None:intergenic
GTGGTGCCAAAGGAGGGATA+GGG 0.615069 7_2:+67098102 Msa1070800:CDS
TGATATGGGAACAGGACCAC+AGG 0.619474 7_2:+67098229 Msa1070800:CDS
GTTCAACATGATAATGCTAG+AGG 0.620110 7_2:+67097686 Msa1070800:CDS
TGATCTAATTGGAACTCACA+TGG 0.620887 7_2:+67098193 Msa1070800:CDS
ACGGTTAACTCCCAAACTGA+AGG 0.626019 7_2:-67099808 None:intergenic
CTAGAGGCCCCATGAAAGGA+GGG 0.628040 7_2:+67097702 Msa1070800:CDS
TTAATCCCAGCAGCTCTTGG+GGG 0.631328 7_2:+67098984 Msa1070800:CDS
AACATACCAAGAAATGTAGA+GGG 0.634875 7_2:-67094687 None:intergenic
AACCAACCTCATCAGCATCA+GGG 0.638651 7_2:-67099205 None:intergenic
TATGAATGCAGACCATGGCA+TGG 0.640845 7_2:+67098382 Msa1070800:intron
GGAGCTATAAAGAACAGCAA+AGG 0.646325 7_2:+67098849 Msa1070800:CDS
GGACAGTGGCCCTTGCCACA+CGG 0.648599 7_2:-67099827 None:intergenic
GAATATAAATAACCTCAGGA+TGG 0.651268 7_2:-67097733 None:intergenic
TGTACCATTCCAAAAGATGA+CGG 0.655126 7_2:+67097635 Msa1070800:CDS
GAACATCCAAGGGTTTATGT+GGG 0.659688 7_2:+67099683 Msa1070800:intron
GGAAGAGTTTATCTGGACAA+CGG 0.662918 7_2:+67098648 Msa1070800:CDS
GATATACACAGAACATCCAA+GGG 0.663024 7_2:+67099673 Msa1070800:intron
AATCAAATGAATCACCACCA+TGG 0.671603 7_2:-67098929 None:intergenic
GTAGCAAATATACCATATGG+TGG 0.679072 7_2:+67098083 Msa1070800:CDS
CAATTAATTGATGAGAAAGG+GGG 0.684422 7_2:+67098798 Msa1070800:CDS
TTCCCAACCTCTAAGGACAG+TGG 0.686018 7_2:-67099841 None:intergenic
AATTTGCATAAATGTCTGGG+AGG 0.710346 7_2:-67099340 None:intergenic
CAGTTTGGGAGTTAACCGTG+TGG 0.725194 7_2:+67099812 Msa1070800:CDS
AGGGATCAGATACCATCCTG+AGG 0.734957 7_2:+67097721 Msa1070800:CDS
GGAGTAAAAGGATTCCATGG+TGG 0.740248 7_2:+67098915 Msa1070800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTAATTCAATTAAAAAAA+AGG - chr7_2:67094542-67094561 None:intergenic 10.0%
!! TAAATTTATAAAGTGATTAA+TGG - chr7_2:67095086-67095105 None:intergenic 10.0%
!! TAATCACTTTATAAATTTAA+TGG + chr7_2:67095087-67095106 Msa1070800:intron 10.0%
!!! AATTTTATAAAGTTTAACAT+TGG + chr7_2:67095628-67095647 Msa1070800:intron 10.0%
!! AAAATTAATATAATCAACAT+AGG + chr7_2:67096309-67096328 Msa1070800:intron 10.0%
!!! ATTTTATTGTATTATTCTTT+TGG + chr7_2:67099111-67099130 Msa1070800:intron 10.0%
!! TTGACAATCTTAAATATTAT+AGG + chr7_2:67096377-67096396 Msa1070800:intron 15.0%
!!! TTAAGGTAATGTTTTAATTA+AGG + chr7_2:67096896-67096915 Msa1070800:intron 15.0%
!! CAATTAATCATAAAAAGATT+AGG - chr7_2:67097094-67097113 None:intergenic 15.0%
!!! CTAATCTTTTTATGATTAAT+TGG + chr7_2:67097092-67097111 Msa1070800:intron 15.0%
!! ATATGTCATAAAATACAAAA+AGG - chr7_2:67097168-67097187 None:intergenic 15.0%
!! AATATAAACTAGTAAAAGTA+TGG - chr7_2:67097192-67097211 None:intergenic 15.0%
!! GATATAAATATTGTTAAAGA+AGG + chr7_2:67097245-67097264 Msa1070800:intron 15.0%
!!! TTTTTTTTTTTTTGTATAGG+AGG - chr7_2:67097848-67097867 None:intergenic 15.0%
!!! ATATGGATTAACATTATTTT+TGG + chr7_2:67098334-67098353 Msa1070800:intron 15.0%
!! AACAAATTTAGAAAATTGAA+TGG - chr7_2:67098530-67098549 None:intergenic 15.0%
!! CTAAAGTTAAATTATAACAA+AGG + chr7_2:67099073-67099092 Msa1070800:intron 15.0%
!!! AATTAAACTTTGATTTCATA+TGG + chr7_2:67099420-67099439 Msa1070800:intron 15.0%
!!! ATCTTTTTTCAAGTTTTATG+TGG + chr7_2:67094764-67094783 Msa1070800:intron 20.0%
!!! TAATGATAAGAACTTGTTAA+AGG + chr7_2:67094905-67094924 Msa1070800:intron 20.0%
!!! AACATTTGTTGTTTAAGTTT+CGG - chr7_2:67095764-67095783 None:intergenic 20.0%
!!! TTTTGTTTTTGTTGTGTATT+TGG + chr7_2:67095961-67095980 Msa1070800:intron 20.0%
!! TGTAGATGATAAAAATTAAG+AGG + chr7_2:67096070-67096089 Msa1070800:intron 20.0%
!!! TAATTTTAGTCACTCAAATA+AGG - chr7_2:67096268-67096287 None:intergenic 20.0%
!! TAATATAATCAACATAGGAT+AGG + chr7_2:67096314-67096333 Msa1070800:intron 20.0%
!! AGGATTTAATAATTGTGAAA+TGG + chr7_2:67096397-67096416 Msa1070800:intron 20.0%
!! GGATTTAATAATTGTGAAAT+GGG + chr7_2:67096398-67096417 Msa1070800:intron 20.0%
!! TTGTTGTATTAGCAAATATT+TGG + chr7_2:67096794-67096813 Msa1070800:intron 20.0%
!!! GTGTCAAATTTTCAATAAAA+AGG + chr7_2:67096836-67096855 Msa1070800:intron 20.0%
!!! AATTTTCAATAAAAAGGACA+AGG + chr7_2:67096842-67096861 Msa1070800:intron 20.0%
!! ATTAGAATATAAATAACCTC+AGG - chr7_2:67097740-67097759 None:intergenic 20.0%
!! AAAAAATCTTAATTACCAAG+TGG + chr7_2:67097763-67097782 Msa1070800:intron 20.0%
!!! ATTGTATTATTCTTTTGGTA+TGG + chr7_2:67099116-67099135 Msa1070800:intron 20.0%
!! AAATGATTGAATGTAACAAT+AGG - chr7_2:67099526-67099545 None:intergenic 20.0%
!!! CCAGTAATCATTTTAAAAAA+TGG - chr7_2:67099549-67099568 None:intergenic 20.0%
!!! CCATTTTTTAAAATGATTAC+TGG + chr7_2:67099546-67099565 Msa1070800:intron 20.0%
!! ATTCTAAATCATTAAGCAAA+TGG - chr7_2:67100044-67100063 None:intergenic 20.0%
! AAATTAGCAAAGGAAAATGT+GGG - chr7_2:67094264-67094283 None:intergenic 25.0%
! AAAATTAGCAAAGGAAAATG+TGG - chr7_2:67094265-67094284 None:intergenic 25.0%
! TCTTCAAGTCATTATTGTAA+TGG + chr7_2:67094324-67094343 Msa1070800:five_prime_UTR 25.0%
! CAGAATATGATGCTTAAATA+TGG - chr7_2:67094420-67094439 None:intergenic 25.0%
! GTCATATTTGCAAATTAACA+AGG + chr7_2:67094511-67094530 Msa1070800:intron 25.0%
! TTGAATTAGATTCCTTTGTT+TGG + chr7_2:67094551-67094570 Msa1070800:intron 25.0%
!! TGAATTAGATTCCTTTGTTT+GGG + chr7_2:67094552-67094571 Msa1070800:intron 25.0%
!!! TTTTTCAAGTTTTATGTGGT+TGG + chr7_2:67094768-67094787 Msa1070800:intron 25.0%
! AATCGAATAATAATACGACA+CGG - chr7_2:67095210-67095229 None:intergenic 25.0%
! ACTTCAATTACTCAAATTGA+TGG - chr7_2:67095366-67095385 None:intergenic 25.0%
! TTAAGTGACATACTAGTATT+TGG - chr7_2:67095425-67095444 None:intergenic 25.0%
! TAAAAGAAGAACATCTTAAC+TGG + chr7_2:67095500-67095519 Msa1070800:intron 25.0%
! AAAAGAAGAACATCTTAACT+GGG + chr7_2:67095501-67095520 Msa1070800:intron 25.0%
! CAGATAAAACTGTAATTAAG+TGG + chr7_2:67095651-67095670 Msa1070800:intron 25.0%
! AGACTTTCATAAAACTTTAC+CGG - chr7_2:67095835-67095854 None:intergenic 25.0%
!!! TATTTGGTTTTAGTGAGAAA+TGG + chr7_2:67095977-67095996 Msa1070800:intron 25.0%
!! ATGTCAAATACGTTGTTATT+TGG + chr7_2:67096021-67096040 Msa1070800:intron 25.0%
!!! TGTCAAATACGTTGTTATTT+GGG + chr7_2:67096022-67096041 Msa1070800:intron 25.0%
! AGATGATAAAAATTAAGAGG+AGG + chr7_2:67096073-67096092 Msa1070800:intron 25.0%
! AGGATAGAGATAAACATATA+CGG + chr7_2:67096093-67096112 Msa1070800:intron 25.0%
! CTAGCATGCATAAATATTAT+AGG + chr7_2:67096345-67096364 Msa1070800:intron 25.0%
! TTACAAATATACATATCCCA+CGG - chr7_2:67096493-67096512 None:intergenic 25.0%
!! ATCTAATGGATACAAAGTTA+TGG + chr7_2:67096551-67096570 Msa1070800:intron 25.0%
! ATACAAAGTTATGGATACAA+TGG + chr7_2:67096560-67096579 Msa1070800:intron 25.0%
! TGTATCTAAATGGAAATTGT+GGG - chr7_2:67096712-67096731 None:intergenic 25.0%
!!! ATATATTTAGCCTTTTCTAG+AGG + chr7_2:67097040-67097059 Msa1070800:intron 25.0%
!! ACATAAAAATCCTCTAGAAA+AGG - chr7_2:67097053-67097072 None:intergenic 25.0%
!! ATATTTGTTGACATTGACTA+TGG + chr7_2:67097207-67097226 Msa1070800:intron 25.0%
!!! TACAAACAGGAATTTTAAGT+TGG + chr7_2:67097423-67097442 Msa1070800:CDS 25.0%
! AAAGTTTACTCATTCCATTT+AGG + chr7_2:67097482-67097501 Msa1070800:CDS 25.0%
! AAGTTTACTCATTCCATTTA+GGG + chr7_2:67097483-67097502 Msa1070800:CDS 25.0%
!! TTCTAGCAAATTTGTTTACT+AGG + chr7_2:67097541-67097560 Msa1070800:intron 25.0%
! TGTTCTGTTTCATGTTATTA+TGG + chr7_2:67097575-67097594 Msa1070800:intron 25.0%
!! TATTATGGTTTTCTGAATGA+CGG + chr7_2:67097590-67097609 Msa1070800:intron 25.0%
! TATTGCAAATTCAAATGAAC+TGG + chr7_2:67097937-67097956 Msa1070800:intron 25.0%
!! AAACTGTTATGTGTGTTTTT+AGG + chr7_2:67097966-67097985 Msa1070800:intron 25.0%
! TCTGAATATGAATCGTTTAT+TGG + chr7_2:67097997-67098016 Msa1070800:intron 25.0%
! AATCGTTTATTGGAATGATT+AGG + chr7_2:67098007-67098026 Msa1070800:intron 25.0%
! CAGATATACTTAATTCTGAA+GGG - chr7_2:67098133-67098152 None:intergenic 25.0%
! TCAGATATACTTAATTCTGA+AGG - chr7_2:67098134-67098153 None:intergenic 25.0%
!! AATTTTCTGAGTAAAAACTC+TGG - chr7_2:67098171-67098190 None:intergenic 25.0%
! CAGAAAATTCATGATCTAAT+TGG + chr7_2:67098182-67098201 Msa1070800:CDS 25.0%
! TTATACCATTGATGCAAATA+TGG + chr7_2:67098317-67098336 Msa1070800:intron 25.0%
! TTAATCCATATTTGCATCAA+TGG - chr7_2:67098325-67098344 None:intergenic 25.0%
! GATGAATATTCCAAATTTCA+CGG + chr7_2:67098411-67098430 Msa1070800:CDS 25.0%
! TGGAATCAATTACTTACTAT+AGG - chr7_2:67098465-67098484 None:intergenic 25.0%
! ATTGAATGGTTTATTAAGCA+TGG - chr7_2:67098516-67098535 None:intergenic 25.0%
! CACAATTAATTGATGAGAAA+GGG + chr7_2:67098796-67098815 Msa1070800:CDS 25.0%
! ACAATTAATTGATGAGAAAG+GGG + chr7_2:67098797-67098816 Msa1070800:CDS 25.0%
! GGAAAATGCAAATGAAATTA+AGG + chr7_2:67099145-67099164 Msa1070800:CDS 25.0%
!! TTGCAGATTCTAAAGAAAAA+AGG + chr7_2:67099308-67099327 Msa1070800:intron 25.0%
! ATATTAAAGGCTTATTGAGA+GGG + chr7_2:67099492-67099511 Msa1070800:intron 25.0%
! TTGAATGTAACAATAGGTAT+TGG - chr7_2:67099520-67099539 None:intergenic 25.0%
! TAATATGTATTGCTCTTATG+TGG + chr7_2:67099640-67099659 Msa1070800:intron 25.0%
! AGCTAAAAAACTACATGAAT+AGG + chr7_2:67099727-67099746 Msa1070800:CDS 25.0%
! GCTAAAAAACTACATGAATA+GGG + chr7_2:67099728-67099747 Msa1070800:CDS 25.0%
! CTAAAAAACTACATGAATAG+GGG + chr7_2:67099729-67099748 Msa1070800:CDS 25.0%
!! TTTATCACTGATTAAAGATG+AGG + chr7_2:67099989-67100008 Msa1070800:three_prime_UTR 25.0%
!! TTATCACTGATTAAAGATGA+GGG + chr7_2:67099990-67100009 Msa1070800:three_prime_UTR 25.0%
!! TCGTAGTATTAAGCATTTTA+AGG - chr7_2:67100107-67100126 None:intergenic 25.0%
GTAGAGCATAAAATTAGCAA+AGG - chr7_2:67094274-67094293 None:intergenic 30.0%
GTCATTATTGTAATGGTTGA+AGG + chr7_2:67094331-67094350 Msa1070800:five_prime_UTR 30.0%
GATGCTTAAATATGGTTAGA+GGG - chr7_2:67094412-67094431 None:intergenic 30.0%
TGATGCTTAAATATGGTTAG+AGG - chr7_2:67094413-67094432 None:intergenic 30.0%
AGAATTGAATTCCCAAACAA+AGG - chr7_2:67094566-67094585 None:intergenic 30.0%
!! TCTTATTCTCCCTTAGTTTT+TGG + chr7_2:67094583-67094602 Msa1070800:intron 30.0%
!! CTTATTCTCCCTTAGTTTTT+GGG + chr7_2:67094584-67094603 Msa1070800:intron 30.0%
!! TTATTCTCCCTTAGTTTTTG+GGG + chr7_2:67094585-67094604 Msa1070800:intron 30.0%
AACATACCAAGAAATGTAGA+GGG - chr7_2:67094690-67094709 None:intergenic 30.0%
AAACATACCAAGAAATGTAG+AGG - chr7_2:67094691-67094710 None:intergenic 30.0%
AAATATGCAATGCAAAGATG+AGG - chr7_2:67094933-67094952 None:intergenic 30.0%
!!! TTTTGCTTTGAAACTCTTGA+TGG + chr7_2:67094950-67094969 Msa1070800:intron 30.0%
GAGTCAAAAGTTGGATAATT+TGG - chr7_2:67095130-67095149 None:intergenic 30.0%
ACATTGAAAGAGTCAAAAGT+TGG - chr7_2:67095139-67095158 None:intergenic 30.0%
!! ACTTTTGACTCTTTCAATGT+CGG + chr7_2:67095139-67095158 Msa1070800:intron 30.0%
! AGTTTGACCACATTTTCATT+AGG - chr7_2:67095170-67095189 None:intergenic 30.0%
AAAGAAGAACATCTTAACTG+GGG + chr7_2:67095502-67095521 Msa1070800:intron 30.0%
AAATTAATACAGCCCAATGA+GGG + chr7_2:67095574-67095593 Msa1070800:intron 30.0%
!!! ACCTCTTTAAGTTTTAGGTT+AGG + chr7_2:67095711-67095730 Msa1070800:intron 30.0%
TCCTAACCTAAAACTTAAAG+AGG - chr7_2:67095715-67095734 None:intergenic 30.0%
AGGAAATGTAAGAAAGCTTA+TGG + chr7_2:67095731-67095750 Msa1070800:intron 30.0%
TGAAATGTTAAGAATGTCCT+TGG + chr7_2:67095791-67095810 Msa1070800:intron 30.0%
!! ATTGACTCTTTCAAGGTTTT+AGG - chr7_2:67096153-67096172 None:intergenic 30.0%
! GTTTGAAATTGACTCTTTCA+AGG - chr7_2:67096160-67096179 None:intergenic 30.0%
AAACATGTATTAATCCTCGT+TGG - chr7_2:67096204-67096223 None:intergenic 30.0%
CTAATGTTCATACACATATG+TGG + chr7_2:67096522-67096541 Msa1070800:intron 30.0%
CTTTGTATCCATTAGATAAG+AGG - chr7_2:67096548-67096567 None:intergenic 30.0%
GGCTATAAAATTATGTGAAG+AGG - chr7_2:67096671-67096690 None:intergenic 30.0%
CTGTATCTAAATGGAAATTG+TGG - chr7_2:67096713-67096732 None:intergenic 30.0%
! GTTTGGAATCTGTATCTAAA+TGG - chr7_2:67096722-67096741 None:intergenic 30.0%
TCAAGAAGTTTCAAATGGTT+TGG - chr7_2:67096739-67096758 None:intergenic 30.0%
CAACATCAAGAAGTTTCAAA+TGG - chr7_2:67096744-67096763 None:intergenic 30.0%
AACTTCTTGATGTTGTACAA+AGG + chr7_2:67096749-67096768 Msa1070800:intron 30.0%
ACACGTTATGTGATACTATT+GGG - chr7_2:67096820-67096839 None:intergenic 30.0%
! AATAAAAAGGACAAGGTGTT+TGG + chr7_2:67096849-67096868 Msa1070800:intron 30.0%
TACACATTTCATTCAAAAGC+TGG + chr7_2:67096873-67096892 Msa1070800:intron 30.0%
TTTCATTCAAAAGCTGGTTA+AGG + chr7_2:67096879-67096898 Msa1070800:intron 30.0%
AAAAGGTTGAATATTGTGTC+AGG + chr7_2:67097360-67097379 Msa1070800:intron 30.0%
TTTACCTTGATTTCCCTAAA+TGG - chr7_2:67097499-67097518 None:intergenic 30.0%
! TACATTCAACCTGAATTTTC+AGG - chr7_2:67097619-67097638 None:intergenic 30.0%
GAATATAAATAACCTCAGGA+TGG - chr7_2:67097736-67097755 None:intergenic 30.0%
TGACAAAAACTAAATCTCAG+TGG - chr7_2:67097817-67097836 None:intergenic 30.0%
TTTACTAACTAACTAACCTG+TGG - chr7_2:67098248-67098267 None:intergenic 30.0%
CTGTTCGATGAAATTAGAAA+TGG - chr7_2:67098485-67098504 None:intergenic 30.0%
TTTGTTTCCTTTGTCAAACT+AGG + chr7_2:67098544-67098563 Msa1070800:intron 30.0%
TGACGAAGTTCTTAAATGAA+AGG - chr7_2:67098698-67098717 None:intergenic 30.0%
ACCATATTGTGTATTTGTTC+AGG + chr7_2:67098746-67098765 Msa1070800:intron 30.0%
CCATATTGTGTATTTGTTCA+GGG + chr7_2:67098747-67098766 Msa1070800:intron 30.0%
GCACAATTAATTGATGAGAA+AGG + chr7_2:67098795-67098814 Msa1070800:CDS 30.0%
CAATTAATTGATGAGAAAGG+GGG + chr7_2:67098798-67098817 Msa1070800:CDS 30.0%
! TATTCTTTTGGTATGGTTGA+AGG + chr7_2:67099123-67099142 Msa1070800:intron 30.0%
! ATTCTTTTGGTATGGTTGAA+GGG + chr7_2:67099124-67099143 Msa1070800:intron 30.0%
AGTAAGGAAGGTAATTAACA+TGG - chr7_2:67099289-67099308 None:intergenic 30.0%
!! TTCTTTAGAATCTGCAAGTA+AGG - chr7_2:67099305-67099324 None:intergenic 30.0%
CTGAATTTGCATAAATGTCT+GGG - chr7_2:67099346-67099365 None:intergenic 30.0%
AAGCCTTTAATATGAAGTGT+CGG - chr7_2:67099485-67099504 None:intergenic 30.0%
CATATTAAAGGCTTATTGAG+AGG + chr7_2:67099491-67099510 Msa1070800:intron 30.0%
GTTAATCCAAGAATAGTACA+TGG - chr7_2:67100018-67100037 None:intergenic 30.0%
!!! AGCATTTTAAGGCTTATAGA+TGG - chr7_2:67100096-67100115 None:intergenic 30.0%
AATGCTTAATACTACGAACT+TGG + chr7_2:67100110-67100129 Msa1070800:three_prime_UTR 30.0%
! ATATGCTTTCTAGTGTCTAG+TGG + chr7_2:67094372-67094391 Msa1070800:intron 35.0%
! TATGCTTTCTAGTGTCTAGT+GGG + chr7_2:67094373-67094392 Msa1070800:intron 35.0%
GTCAGAAAGAATCAAAAGTG+AGG - chr7_2:67094450-67094469 None:intergenic 35.0%
!! TATTCTCCCTTAGTTTTTGG+GGG + chr7_2:67094586-67094605 Msa1070800:intron 35.0%
TAAGAACCCCCAAAAACTAA+GGG - chr7_2:67094595-67094614 None:intergenic 35.0%
TTAAGAACCCCCAAAAACTA+AGG - chr7_2:67094596-67094615 None:intergenic 35.0%
AGCAATGTGAAACAAGTGAA+TGG - chr7_2:67094644-67094663 None:intergenic 35.0%
! TCACATTGCTTTGTTAAGCT+TGG + chr7_2:67094654-67094673 Msa1070800:five_prime_UTR 35.0%
GATTTCAGTAGTCTCTAGAT+CGG + chr7_2:67094998-67095017 Msa1070800:intron 35.0%
ATTTCAGTAGTCTCTAGATC+GGG + chr7_2:67094999-67095018 Msa1070800:intron 35.0%
ATCTACCCTTTATCTTCTTG+TGG + chr7_2:67095039-67095058 Msa1070800:intron 35.0%
GCAAACCACAAGAAGATAAA+GGG - chr7_2:67095047-67095066 None:intergenic 35.0%
TGCAAACCACAAGAAGATAA+AGG - chr7_2:67095048-67095067 None:intergenic 35.0%
ATTAATGGTGTGAGATATGG+AGG - chr7_2:67095071-67095090 None:intergenic 35.0%
GTGATTAATGGTGTGAGATA+TGG - chr7_2:67095074-67095093 None:intergenic 35.0%
GAACTGATTGGATATGTGTA+AGG + chr7_2:67095261-67095280 Msa1070800:intron 35.0%
GATTGGATATGTGTAAGGAA+TGG + chr7_2:67095266-67095285 Msa1070800:intron 35.0%
CAAATTAATACAGCCCAATG+AGG + chr7_2:67095573-67095592 Msa1070800:intron 35.0%
!! CATGCACCTCTTTAAGTTTT+AGG + chr7_2:67095706-67095725 Msa1070800:intron 35.0%
TCATAAAACTTTACCGGTGT+GGG - chr7_2:67095829-67095848 None:intergenic 35.0%
TTCATAAAACTTTACCGGTG+TGG - chr7_2:67095830-67095849 None:intergenic 35.0%
!! AATGCTTAAAGAGTATCACG+TGG + chr7_2:67095918-67095937 Msa1070800:intron 35.0%
ATATGTGGCCTCTTATCTAA+TGG + chr7_2:67096537-67096556 Msa1070800:intron 35.0%
TTTACCTCATGCGTAAGAAT+AGG + chr7_2:67096584-67096603 Msa1070800:intron 35.0%
! TATGTGAAGAGGTATGATTC+AGG - chr7_2:67096660-67096679 None:intergenic 35.0%
!! GGGAATCATTTGGTTCTAAA+TGG - chr7_2:67096692-67096711 None:intergenic 35.0%
TGGAAATTGTGGGAATCATT+TGG - chr7_2:67096702-67096721 None:intergenic 35.0%
GACACGTTATGTGATACTAT+TGG - chr7_2:67096821-67096840 None:intergenic 35.0%
AAGAAGCTGGAACATAAAAC+AGG + chr7_2:67096977-67096996 Msa1070800:intron 35.0%
! ATTGGTGACAATGATACACA+TGG + chr7_2:67097110-67097129 Msa1070800:intron 35.0%
! ACCTTTTATCAAAAGAGACG+CGG - chr7_2:67097347-67097366 None:intergenic 35.0%
AATATTGTGTCAGGTTCTTC+TGG + chr7_2:67097369-67097388 Msa1070800:intron 35.0%
!!! GGAATTTTAAGTTGGCTTCT+AGG + chr7_2:67097431-67097450 Msa1070800:CDS 35.0%
! GAGTAAACTTTTCTCAAGCT+TGG - chr7_2:67097473-67097492 None:intergenic 35.0%
CATTCCATTTAGGGAAATCA+AGG + chr7_2:67097492-67097511 Msa1070800:CDS 35.0%
TGTACCATTCCAAAAGATGA+CGG + chr7_2:67097635-67097654 Msa1070800:CDS 35.0%
! GTTCAACATGATAATGCTAG+AGG + chr7_2:67097686-67097705 Msa1070800:CDS 35.0%
AGTACTCAACGATTCGTATA+TGG + chr7_2:67097882-67097901 Msa1070800:intron 35.0%
GATTCGTATATGGTTGTTTG+TGG + chr7_2:67097892-67097911 Msa1070800:intron 35.0%
GCTGTAGCAAATATACCATA+TGG + chr7_2:67098080-67098099 Msa1070800:CDS 35.0%
GTAGCAAATATACCATATGG+TGG + chr7_2:67098083-67098102 Msa1070800:CDS 35.0%
TGATCTAATTGGAACTCACA+TGG + chr7_2:67098193-67098212 Msa1070800:CDS 35.0%
TTTGATATGAATGCAGACCA+TGG + chr7_2:67098377-67098396 Msa1070800:intron 35.0%
AGGCTTTGCTTAATGAGTAT+GGG + chr7_2:67098627-67098646 Msa1070800:CDS 35.0%
! AACTTCGTCAACGAAGTTTT+TGG + chr7_2:67098708-67098727 Msa1070800:intron 35.0%
CCCTGAACAAATACACAATA+TGG - chr7_2:67098750-67098769 None:intergenic 35.0%
! TGTGTATTTGTTCAGGGTTT+TGG + chr7_2:67098753-67098772 Msa1070800:intron 35.0%
!!! TTCAGGGTTTTGGAAATGTA+GGG + chr7_2:67098763-67098782 Msa1070800:intron 35.0%
!! TTTTGGAAATGTAGGGTCTT+GGG + chr7_2:67098770-67098789 Msa1070800:CDS 35.0%
! TTTTACTCCTTTCTGCTCTT+TGG - chr7_2:67098904-67098923 None:intergenic 35.0%
AAAGAGCAGAAAGGAGTAAA+AGG + chr7_2:67098903-67098922 Msa1070800:CDS 35.0%
AAAGGAGTAAAAGGATTCCA+TGG + chr7_2:67098912-67098931 Msa1070800:CDS 35.0%
AATCAAATGAATCACCACCA+TGG - chr7_2:67098932-67098951 None:intergenic 35.0%
TGTCATCTTTCCAAGCTAAA+GGG - chr7_2:67099254-67099273 None:intergenic 35.0%
TTAGAATCTGCAAGTAAGGA+AGG - chr7_2:67099301-67099320 None:intergenic 35.0%
AATTTGCATAAATGTCTGGG+AGG - chr7_2:67099343-67099362 None:intergenic 35.0%
CCTGAATTTGCATAAATGTC+TGG - chr7_2:67099347-67099366 None:intergenic 35.0%
CCAGACATTTATGCAAATTC+AGG + chr7_2:67099344-67099363 Msa1070800:CDS 35.0%
GACATTTATGCAAATTCAGG+AGG + chr7_2:67099347-67099366 Msa1070800:CDS 35.0%
! TTACAGTTAGCTACTTTGAG+TGG + chr7_2:67099372-67099391 Msa1070800:CDS 35.0%
! TACAGTTAGCTACTTTGAGT+GGG + chr7_2:67099373-67099392 Msa1070800:CDS 35.0%
TGATATACACAGAACATCCA+AGG + chr7_2:67099672-67099691 Msa1070800:intron 35.0%
GATATACACAGAACATCCAA+GGG + chr7_2:67099673-67099692 Msa1070800:intron 35.0%
TCATGAATGTGATCTTCGAA+TGG + chr7_2:67099782-67099801 Msa1070800:CDS 35.0%
CATGAATGTGATCTTCGAAT+GGG + chr7_2:67099783-67099802 Msa1070800:CDS 35.0%
! TCTTTTATTCCAAGCAGCAA+CGG - chr7_2:67099880-67099899 None:intergenic 35.0%
GTACTCAGATCAACATGCTT+TGG - chr7_2:67094472-67094491 None:intergenic 40.0%
GCATTTCCCTCTACATTTCT+TGG + chr7_2:67094681-67094700 Msa1070800:five_prime_UTR 40.0%
! TATGTGTTGCTCTTTGCATC+AGG + chr7_2:67094825-67094844 Msa1070800:intron 40.0%
! TGACTCTTTCAATGTCGGTT+TGG + chr7_2:67095144-67095163 Msa1070800:intron 40.0%
GGTTTGGCCTAATGAAAATG+TGG + chr7_2:67095160-67095179 Msa1070800:intron 40.0%
TGACGTGTACTTGAACTGAT+TGG + chr7_2:67095249-67095268 Msa1070800:intron 40.0%
AAGAACATCTTAACTGGGGA+AGG + chr7_2:67095506-67095525 Msa1070800:intron 40.0%
! TTAAAGAGGTGCATGTGACA+GGG - chr7_2:67095701-67095720 None:intergenic 40.0%
AGAGTTACTCAATCCTAACG+TGG + chr7_2:67096441-67096460 Msa1070800:intron 40.0%
ATATCCCACGGCTTATTAAG+CGG - chr7_2:67096481-67096500 None:intergenic 40.0%
TAGTCCTATTCTTACGCATG+AGG - chr7_2:67096591-67096610 None:intergenic 40.0%
!!! CGTAGTGTTTTGAAAGAAGC+TGG + chr7_2:67096964-67096983 Msa1070800:intron 40.0%
TGACAATGATACACATGGCA+TGG + chr7_2:67097115-67097134 Msa1070800:intron 40.0%
! TCCGCGTCTCTTTTGATAAA+AGG + chr7_2:67097343-67097362 Msa1070800:intron 40.0%
!! TAAGTTGGCTTCTAGGCTTT+TGG + chr7_2:67097438-67097457 Msa1070800:CDS 40.0%
!! AAGTTGGCTTCTAGGCTTTT+GGG + chr7_2:67097439-67097458 Msa1070800:CDS 40.0%
GGCACGTTGCAATCTTATAT+TGG + chr7_2:67097656-67097675 Msa1070800:CDS 40.0%
TATCTGATCCCTCCTTTCAT+GGG - chr7_2:67097713-67097732 None:intergenic 40.0%
ATCTTAATTACCAAGTGGCG+TGG + chr7_2:67097768-67097787 Msa1070800:intron 40.0%
! GCTAAAGCATTCACTTCATC+TGG - chr7_2:67098038-67098057 None:intergenic 40.0%
CTTTAGCGCAACTAATGACA+TGG + chr7_2:67098051-67098070 Msa1070800:CDS 40.0%
GATGTTGCTGTCGTATACTT+TGG + chr7_2:67098280-67098299 Msa1070800:intron 40.0%
TTCATCTAGTATCCATGCCA+TGG - chr7_2:67098397-67098416 None:intergenic 40.0%
CCAAGATCCTAGTTTGACAA+AGG - chr7_2:67098554-67098573 None:intergenic 40.0%
CCTTTGTCAAACTAGGATCT+TGG + chr7_2:67098551-67098570 Msa1070800:intron 40.0%
TTGTCAAACTAGGATCTTGG+TGG + chr7_2:67098554-67098573 Msa1070800:intron 40.0%
GAGGCTTTGCTTAATGAGTA+TGG + chr7_2:67098626-67098645 Msa1070800:CDS 40.0%
GAGTATGGGAAGAGTTTATC+TGG + chr7_2:67098641-67098660 Msa1070800:CDS 40.0%
GGAAGAGTTTATCTGGACAA+CGG + chr7_2:67098648-67098667 Msa1070800:CDS 40.0%
!!! GTTCAGGGTTTTGGAAATGT+AGG + chr7_2:67098762-67098781 Msa1070800:intron 40.0%
!!! GTTTTGGAAATGTAGGGTCT+TGG + chr7_2:67098769-67098788 Msa1070800:CDS 40.0%
! GTTGCTGTTAGTGACATAAC+TGG + chr7_2:67098828-67098847 Msa1070800:CDS 40.0%
GGAGCTATAAAGAACAGCAA+AGG + chr7_2:67098849-67098868 Msa1070800:CDS 40.0%
AAGCATACCAAAGAGCAGAA+AGG + chr7_2:67098894-67098913 Msa1070800:CDS 40.0%
! TTTTAATCCCAGCAGCTCTT+GGG + chr7_2:67098982-67099001 Msa1070800:CDS 40.0%
CTGTCATCTTTCCAAGCTAA+AGG - chr7_2:67099255-67099274 None:intergenic 40.0%
! GCACCGACACTTCATATTAA+AGG + chr7_2:67099479-67099498 Msa1070800:intron 40.0%
AGAACATCCAAGGGTTTATG+TGG + chr7_2:67099682-67099701 Msa1070800:intron 40.0%
GAACATCCAAGGGTTTATGT+GGG + chr7_2:67099683-67099702 Msa1070800:intron 40.0%
AGGGTTCCATGTACTATTCT+TGG + chr7_2:67100009-67100028 Msa1070800:three_prime_UTR 40.0%
AAAGCTTGTGACTCGTTTGC+AGG + chr7_2:67094614-67094633 Msa1070800:intron 45.0%
AGTTCAAGTACACGTCAGTG+TGG - chr7_2:67095246-67095265 None:intergenic 45.0%
! ATTGTGGAAGGCAGAGTACT+TGG + chr7_2:67095597-67095616 Msa1070800:intron 45.0%
! CTTAAAGAGGTGCATGTGAC+AGG - chr7_2:67095702-67095721 None:intergenic 45.0%
TCATGATTTCGTGCCACGTT+AGG - chr7_2:67096457-67096476 None:intergenic 45.0%
ATGATCCGCTTAATAAGCCG+TGG + chr7_2:67096473-67096492 Msa1070800:intron 45.0%
TGATCCGCTTAATAAGCCGT+GGG + chr7_2:67096474-67096493 Msa1070800:intron 45.0%
TTCAGGTGAGGTAGGAACTA+TGG - chr7_2:67096643-67096662 None:intergenic 45.0%
AGGTATGATTCAGGTGAGGT+AGG - chr7_2:67096651-67096670 None:intergenic 45.0%
! GAAGAGGTATGATTCAGGTG+AGG - chr7_2:67096655-67096674 None:intergenic 45.0%
TTGTGTCAGGTTCTTCTGGT+TGG + chr7_2:67097373-67097392 Msa1070800:intron 45.0%
! TCAGGTTCTTCTGGTTGGTT+AGG + chr7_2:67097378-67097397 Msa1070800:intron 45.0%
! CAGGTTCTTCTGGTTGGTTA+GGG + chr7_2:67097379-67097398 Msa1070800:intron 45.0%
ATGCACTAGCAGCTACAAAC+AGG + chr7_2:67097410-67097429 Msa1070800:CDS 45.0%
TGACGGTGTCCTGAAAATTC+AGG + chr7_2:67097607-67097626 Msa1070800:intron 45.0%
ATCTGATCCCTCCTTTCATG+GGG - chr7_2:67097712-67097731 None:intergenic 45.0%
GTATCTGATCCCTCCTTTCA+TGG - chr7_2:67097714-67097733 None:intergenic 45.0%
! ATACCATATGGTGGTGCCAA+AGG + chr7_2:67098092-67098111 Msa1070800:CDS 45.0%
GATGTTCCTGCACCTGATAT+GGG + chr7_2:67098215-67098234 Msa1070800:CDS 45.0%
TATGAATGCAGACCATGGCA+TGG + chr7_2:67098382-67098401 Msa1070800:intron 45.0%
! TAGGATCTTGGTGGATCTCT+AGG + chr7_2:67098563-67098582 Msa1070800:intron 45.0%
TGGTATGCTTGAGTAGGCTA+GGG - chr7_2:67098884-67098903 None:intergenic 45.0%
TTGGTATGCTTGAGTAGGCT+AGG - chr7_2:67098885-67098904 None:intergenic 45.0%
GCTCTTTGGTATGCTTGAGT+AGG - chr7_2:67098890-67098909 None:intergenic 45.0%
GGAGTAAAAGGATTCCATGG+TGG + chr7_2:67098915-67098934 Msa1070800:CDS 45.0%
!! GTTTTAATCCCAGCAGCTCT+TGG + chr7_2:67098981-67099000 Msa1070800:CDS 45.0%
TTTAATCCCAGCAGCTCTTG+GGG + chr7_2:67098983-67099002 Msa1070800:CDS 45.0%
AACCAACCTCATCAGCATCA+GGG - chr7_2:67099208-67099227 None:intergenic 45.0%
AAACCAACCTCATCAGCATC+AGG - chr7_2:67099209-67099228 None:intergenic 45.0%
! TAGCTACTTTGAGTGGGTTC+AGG + chr7_2:67099379-67099398 Msa1070800:CDS 45.0%
ACGGTTAACTCCCAAACTGA+AGG - chr7_2:67099811-67099830 None:intergenic 45.0%
!!! ATATTAATTTTTTTTTTGAA+AGG - chr7_2:67096300-67096319 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTGTAT+AGG - chr7_2:67097851-67097870 None:intergenic 5.0%
TACAGCCCAATGAGGGATTG+TGG + chr7_2:67095581-67095600 Msa1070800:intron 50.0%
GCCTTCCACAATCCCTCATT+GGG - chr7_2:67095589-67095608 None:intergenic 50.0%
TGCCTTCCACAATCCCTCAT+TGG - chr7_2:67095590-67095609 None:intergenic 50.0%
GTGGGTGCTTATAGTGTCCA+AGG - chr7_2:67095811-67095830 None:intergenic 50.0%
GACACTATAAGCACCCACAC+CGG + chr7_2:67095813-67095832 Msa1070800:intron 50.0%
! CCTCGTTGGTCTAGTGATGT+TGG - chr7_2:67096190-67096209 None:intergenic 50.0%
CCAACATCACTAGACCAACG+AGG + chr7_2:67096187-67096206 Msa1070800:intron 50.0%
CACATGGCATGGCACATTGA+TGG + chr7_2:67097126-67097145 Msa1070800:intron 50.0%
!!! GGCTTCTAGGCTTTTGGGAT+TGG + chr7_2:67097444-67097463 Msa1070800:CDS 50.0%
!! CGTGCCGTCATCTTTTGGAA+TGG - chr7_2:67097642-67097661 None:intergenic 50.0%
! TGCAACGTGCCGTCATCTTT+TGG - chr7_2:67097647-67097666 None:intergenic 50.0%
AATGCTAGAGGCCCCATGAA+AGG + chr7_2:67097698-67097717 Msa1070800:CDS 50.0%
AGGGATCAGATACCATCCTG+AGG + chr7_2:67097721-67097740 Msa1070800:CDS 50.0%
! CATATGGTGGTGCCAAAGGA+GGG + chr7_2:67098096-67098115 Msa1070800:CDS 50.0%
GTTACACCCTATCCCTCCTT+TGG - chr7_2:67098111-67098130 None:intergenic 50.0%
GGATGTTCCTGCACCTGATA+TGG + chr7_2:67098214-67098233 Msa1070800:CDS 50.0%
TGTGGTCCTGTTCCCATATC+AGG - chr7_2:67098230-67098249 None:intergenic 50.0%
TGATATGGGAACAGGACCAC+AGG + chr7_2:67098229-67098248 Msa1070800:CDS 50.0%
AGGCGAGTAGCCGTGAAATT+TGG - chr7_2:67098424-67098443 None:intergenic 50.0%
! GGTTTTCCAGTCACTACTGC+AGG - chr7_2:67098444-67098463 None:intergenic 50.0%
AGGAGTCATGTTTGCAGCAG+AGG + chr7_2:67098607-67098626 Msa1070800:CDS 50.0%
TGGACAACGGTTCGTCATTC+AGG + chr7_2:67098661-67098680 Msa1070800:CDS 50.0%
TTAATCCCAGCAGCTCTTGG+GGG + chr7_2:67098984-67099003 Msa1070800:CDS 50.0%
!! CTCTTGGGGGTGTCATCAAT+AGG + chr7_2:67098997-67099016 Msa1070800:CDS 50.0%
ATCAGGGTCAGTTGGGTGAT+TGG - chr7_2:67099192-67099211 None:intergenic 50.0%
CATCAGCATCAGGGTCAGTT+GGG - chr7_2:67099199-67099218 None:intergenic 50.0%
TCATCAGCATCAGGGTCAGT+TGG - chr7_2:67099200-67099219 None:intergenic 50.0%
AACTGACCCTGATGCTGATG+AGG + chr7_2:67099199-67099218 Msa1070800:CDS 50.0%
CCTCATCCCACATAAACCCT+TGG - chr7_2:67099692-67099711 None:intergenic 50.0%
CCAAGGGTTTATGTGGGATG+AGG + chr7_2:67099689-67099708 Msa1070800:CDS 50.0%
TCGAATGGGAGCCTTCAGTT+TGG + chr7_2:67099797-67099816 Msa1070800:CDS 50.0%
CGAATGGGAGCCTTCAGTTT+GGG + chr7_2:67099798-67099817 Msa1070800:CDS 50.0%
CAGTTTGGGAGTTAACCGTG+TGG + chr7_2:67099812-67099831 Msa1070800:CDS 50.0%
! TTCCCAACCTCTAAGGACAG+TGG - chr7_2:67099844-67099863 None:intergenic 50.0%
CTCAAGCTTCCCAACCTCTA+AGG - chr7_2:67099851-67099870 None:intergenic 50.0%
GCCCAATGAGGGATTGTGGA+AGG + chr7_2:67095585-67095604 Msa1070800:intron 55.0%
CTAGAGGCCCCATGAAAGGA+GGG + chr7_2:67097702-67097721 Msa1070800:CDS 55.0%
TGTCACTATGCCACGCCACT+TGG - chr7_2:67097781-67097800 None:intergenic 55.0%
CCTCCTTTGGCACCACCATA+TGG - chr7_2:67098098-67098117 None:intergenic 55.0%
! CCATATGGTGGTGCCAAAGG+AGG + chr7_2:67098095-67098114 Msa1070800:CDS 55.0%
! GTGGTGCCAAAGGAGGGATA+GGG + chr7_2:67098102-67098121 Msa1070800:CDS 55.0%
CCTGTTCCCATATCAGGTGC+AGG - chr7_2:67098224-67098243 None:intergenic 55.0%
CCTGCACCTGATATGGGAAC+AGG + chr7_2:67098221-67098240 Msa1070800:CDS 55.0%
TACTCGCCTGCAGTAGTGAC+TGG + chr7_2:67098435-67098454 Msa1070800:CDS 55.0%
CTAGGTAGAGACGCAGCTAC+AGG + chr7_2:67098581-67098600 Msa1070800:CDS 55.0%
AGAGACGCAGCTACAGGAAG+AGG + chr7_2:67098587-67098606 Msa1070800:CDS 55.0%
GACCCTGATGCTGATGAGGT+TGG + chr7_2:67099203-67099222 Msa1070800:intron 55.0%
TGGGAGTTAACCGTGTGGCA+AGG + chr7_2:67099817-67099836 Msa1070800:CDS 55.0%
GGGAGTTAACCGTGTGGCAA+GGG + chr7_2:67099818-67099837 Msa1070800:CDS 55.0%
GGCCACTGTCCTTAGAGGTT+GGG + chr7_2:67099839-67099858 Msa1070800:CDS 55.0%
GAGATCTTGCCGTTGCTGCT+TGG + chr7_2:67099868-67099887 Msa1070800:exon 55.0%
GCTAGAGGCCCCATGAAAGG+AGG + chr7_2:67097701-67097720 Msa1070800:CDS 60.0%
! GGTGGTGCCAAAGGAGGGAT+AGG + chr7_2:67098101-67098120 Msa1070800:CDS 60.0%
TGACACCCCCAAGAGCTGCT+GGG - chr7_2:67098992-67099011 None:intergenic 60.0%
ATGACACCCCCAAGAGCTGC+TGG - chr7_2:67098993-67099012 None:intergenic 60.0%
GCAAGGGCCACTGTCCTTAG+AGG + chr7_2:67099834-67099853 Msa1070800:CDS 60.0%
GGGCCACTGTCCTTAGAGGT+TGG + chr7_2:67099838-67099857 Msa1070800:CDS 60.0%
GGACAGTGGCCCTTGCCACA+CGG - chr7_2:67099830-67099849 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 67094250 67100143 67094250 ID=Msa1070800;Name=Msa1070800
chr7_2 mRNA 67094250 67100143 67094250 ID=Msa1070800-mRNA-1;Parent=Msa1070800;Name=Msa1070800-mRNA-1;_AED=0.27;_eAED=0.27;_QI=194|1|1|1|0.8|0.72|11|274|411
chr7_2 exon 67094250 67094352 67094250 ID=Msa1070800-mRNA-1:exon:14508;Parent=Msa1070800-mRNA-1
chr7_2 exon 67094636 67094702 67094636 ID=Msa1070800-mRNA-1:exon:14509;Parent=Msa1070800-mRNA-1
chr7_2 exon 67097382 67097513 67097382 ID=Msa1070800-mRNA-1:exon:14510;Parent=Msa1070800-mRNA-1
chr7_2 exon 67097629 67097742 67097629 ID=Msa1070800-mRNA-1:exon:14511;Parent=Msa1070800-mRNA-1
chr7_2 exon 67098029 67098250 67098029 ID=Msa1070800-mRNA-1:exon:14512;Parent=Msa1070800-mRNA-1
chr7_2 exon 67098393 67098467 67098393 ID=Msa1070800-mRNA-1:exon:14513;Parent=Msa1070800-mRNA-1
chr7_2 exon 67098566 67098682 67098566 ID=Msa1070800-mRNA-1:exon:14514;Parent=Msa1070800-mRNA-1
chr7_2 exon 67098768 67099018 67098768 ID=Msa1070800-mRNA-1:exon:14515;Parent=Msa1070800-mRNA-1
chr7_2 exon 67099145 67099220 67099145 ID=Msa1070800-mRNA-1:exon:14516;Parent=Msa1070800-mRNA-1
chr7_2 exon 67099314 67099400 67099314 ID=Msa1070800-mRNA-1:exon:14517;Parent=Msa1070800-mRNA-1
chr7_2 exon 67099684 67100143 67099684 ID=Msa1070800-mRNA-1:exon:14518;Parent=Msa1070800-mRNA-1
chr7_2 five_prime_UTR 67094250 67094352 67094250 ID=Msa1070800-mRNA-1:five_prime_utr;Parent=Msa1070800-mRNA-1
chr7_2 five_prime_UTR 67094636 67094702 67094636 ID=Msa1070800-mRNA-1:five_prime_utr;Parent=Msa1070800-mRNA-1
chr7_2 five_prime_UTR 67097382 67097405 67097382 ID=Msa1070800-mRNA-1:five_prime_utr;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67097406 67097513 67097406 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67097629 67097742 67097629 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67098029 67098250 67098029 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67098393 67098467 67098393 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67098566 67098682 67098566 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67098768 67099018 67098768 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67099145 67099220 67099145 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67099314 67099400 67099314 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 CDS 67099684 67099869 67099684 ID=Msa1070800-mRNA-1:cds;Parent=Msa1070800-mRNA-1
chr7_2 three_prime_UTR 67099870 67100143 67099870 ID=Msa1070800-mRNA-1:three_prime_utr;Parent=Msa1070800-mRNA-1
Gene Sequence

>Msa1070800

ATGAATGCACTAGCAGCTACAAACAGGAATTTTAAGTTGGCTTCTAGGCTTTTGGGATTGGATTCCAAGCTTGAGAAAAGTTTACTCATTCCATTTAGGGAAATCAAGGTTGAATGTACCATTCCAAAAGATGACGGCACGTTGCAATCTTATATTGGATTCAGAGTTCAACATGATAATGCTAGAGGCCCCATGAAAGGAGGGATCAGATACCATCCTGAGGTTGATCCAGATGAAGTGAATGCTTTAGCGCAACTAATGACATGGAAAACAGCTGTAGCAAATATACCATATGGTGGTGCCAAAGGAGGGATAGGGTGTAACCCTTCAGAATTAAGTATATCTGAGTTAGAAAGACTTACCAGAGTTTTTACTCAGAAAATTCATGATCTAATTGGAACTCACATGGATGTTCCTGCACCTGATATGGGAACAGGACCACAGACCATGGCATGGATACTAGATGAATATTCCAAATTTCACGGCTACTCGCCTGCAGTAGTGACTGGAAAACCTATAGATCTTGGTGGATCTCTAGGTAGAGACGCAGCTACAGGAAGAGGAGTCATGTTTGCAGCAGAGGCTTTGCTTAATGAGTATGGGAAGAGTTTATCTGGACAACGGTTCGTCATTCAGGGTTTTGGAAATGTAGGGTCTTGGGCTGCACAATTAATTGATGAGAAAGGGGGAAAAATTGTTGCTGTTAGTGACATAACTGGAGCTATAAAGAACAGCAAAGGTCTTGACATCCCTAGCCTACTCAAGCATACCAAAGAGCAGAAAGGAGTAAAAGGATTCCATGGTGGTGATTCATTTGATTCTAACTCAATATTGCTTGAAGATTGTGATGTTTTAATCCCAGCAGCTCTTGGGGGTGTCATCAATAGGGAAAATGCAAATGAAATTAAGGCAAAATTTATTGTTGAAGCAGCCAATCACCCAACTGACCCTGATGCTGATGAGATTCTAAAGAAAAAAGGTGTTGTGATCCTCCCAGACATTTATGCAAATTCAGGAGGTGTTACAGTTAGCTACTTTGAGTGGGTTCAGAACATCCAAGGGTTTATGTGGGATGAGGAGAAAGTGAACAATGAGCTAAAAAACTACATGAATAGGGGTTTCAAAGATGTGAAAGACATGTGCAAAACTCATGAATGTGATCTTCGAATGGGAGCCTTCAGTTTGGGAGTTAACCGTGTGGCAAGGGCCACTGTCCTTAGAGGTTGGGAAGCTTGA

Protein sequence

>Msa1070800

MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLQSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPSELSISELERLTRVFTQKIHDLIGTHMDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVMFAAEALLNEYGKSLSGQRFVIQGFGNVGSWAAQLIDEKGGKIVAVSDITGAIKNSKGLDIPSLLKHTKEQKGVKGFHGGDSFDSNSILLEDCDVLIPAALGGVINRENANEIKAKFIVEAANHPTDPDADEILKKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWDEEKVNNELKNYMNRGFKDVKDMCKTHECDLRMGAFSLGVNRVARATVLRGWEA*