Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071590 | XP_003624928.1 | 96.644 | 447 | 14 | 1 | 1 | 446 | 1 | 447 | 0.0 | 888 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071590 | sp|Q9FHK9|MD26B_ARATH | 46.868 | 463 | 194 | 11 | 6 | 446 | 4 | 436 | 2.35e-119 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071590 | G7L5V2 | 96.644 | 447 | 14 | 1 | 1 | 446 | 1 | 447 | 0.0 | 888 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1071590 | TR | IWS1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0224210 | Msa1071590 | 0.800412 | 1.459224e-48 | -8.615850e-47 |
| Msa0390790 | Msa1071590 | 0.807160 | 5.788454e-50 | -8.615850e-47 |
| Msa1001120 | Msa1071590 | 0.802389 | 5.743230e-49 | -8.615850e-47 |
| Msa1071590 | Msa1221270 | 0.809165 | 2.164997e-50 | -8.615850e-47 |
| Msa1071590 | Msa1265300 | 0.806390 | 8.419372e-50 | -8.615850e-47 |
| Msa1071590 | Msa1383000 | 0.984063 | 1.752727e-159 | -8.615850e-47 |
| Msa0523420 | Msa1071590 | -0.811763 | 5.950292e-51 | -8.615850e-47 |
| Msa0901270 | Msa1071590 | 0.803540 | 3.320367e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071590 | MtrunA17_Chr7g0255811 | 96.622 | 444 | 14 | 1 | 4 | 446 | 1 | 444 | 0.0 | 882 |
| Msa1071590 | MtrunA17_Chr3g0129551 | 33.175 | 211 | 120 | 6 | 9 | 211 | 3 | 200 | 4.90e-23 | 99.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071590 | AT5G05140.1 | 46.868 | 463 | 194 | 11 | 6 | 446 | 4 | 436 | 2.39e-120 | 358 |
| Msa1071590 | AT3G10820.1 | 41.781 | 438 | 207 | 10 | 1 | 436 | 1 | 392 | 5.57e-89 | 276 |
| Msa1071590 | AT3G10820.2 | 41.781 | 438 | 207 | 10 | 1 | 436 | 1 | 392 | 3.30e-86 | 275 |
| Msa1071590 | AT5G09850.1 | 30.769 | 221 | 113 | 5 | 9 | 211 | 3 | 201 | 6.59e-22 | 97.1 |
| Msa1071590 | AT5G09850.4 | 30.769 | 221 | 113 | 5 | 9 | 211 | 3 | 201 | 6.59e-22 | 97.1 |
| Msa1071590 | AT5G09850.2 | 30.769 | 221 | 113 | 5 | 9 | 211 | 3 | 201 | 6.59e-22 | 97.1 |
| Msa1071590 | AT5G09850.5 | 30.769 | 221 | 113 | 5 | 9 | 211 | 3 | 201 | 6.59e-22 | 97.1 |
| Msa1071590 | AT5G09850.3 | 30.769 | 221 | 113 | 5 | 9 | 211 | 3 | 201 | 2.44e-21 | 95.1 |
Find 140 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCCAAGCTATTGAATTT+TGG | 0.116061 | 7_2:-68342916 | None:intergenic |
| TGCTTTCGCCAAACATTTAA+TGG | 0.140548 | 7_2:+68342461 | Msa1071590:three_prime_UTR |
| TTGGAGTTCCATGGCTTAAT+TGG | 0.160863 | 7_2:+68342679 | Msa1071590:three_prime_UTR |
| CCAAAGCTGTAATTGCTAAT+AGG | 0.172892 | 7_2:-68340165 | None:intergenic |
| CCATTGCCGATTGTGATTTC+CGG | 0.189148 | 7_2:-68342348 | None:intergenic |
| ATAGAAATCCCAATCGTTTC+TGG | 0.189498 | 7_2:+68342723 | Msa1071590:three_prime_UTR |
| TTCAACAACAGATGGATTTC+TGG | 0.196234 | 7_2:-68341294 | None:intergenic |
| ATTTCTATTGACAATAATTA+TGG | 0.198017 | 7_2:-68342708 | None:intergenic |
| TCACTTGGGTCATTGAAAAT+TGG | 0.233379 | 7_2:-68339726 | None:intergenic |
| AATTGGTTTGATTCTTCTTC+AGG | 0.261010 | 7_2:-68339709 | None:intergenic |
| TGGGCATTGAGAGGCCTCTT+AGG | 0.273392 | 7_2:-68341942 | None:intergenic |
| CGCTGAATGTTTGAGTTTAG+TGG | 0.274638 | 7_2:-68341867 | None:intergenic |
| CATTGCCGATTGTGATTTCC+GGG | 0.275321 | 7_2:-68342347 | None:intergenic |
| AATTTCAAATCCAATATTCT+TGG | 0.292669 | 7_2:-68342646 | None:intergenic |
| ACATTTATATTACTTGCATT+AGG | 0.294733 | 7_2:+68342762 | Msa1071590:three_prime_UTR |
| GCCGAAGATGCCTCTGAAAA+TGG | 0.300933 | 7_2:+68341905 | Msa1071590:CDS |
| CATTTATATTACTTGCATTA+GGG | 0.318720 | 7_2:+68342763 | Msa1071590:three_prime_UTR |
| TCTTCTATCCATTAAATGTT+TGG | 0.322177 | 7_2:-68342469 | None:intergenic |
| CTCTTGAAGTCTTCGCTTAG+TGG | 0.327399 | 7_2:-68342089 | None:intergenic |
| TATGTAATAAGCAGGTTTAT+AGG | 0.329790 | 7_2:+68342861 | Msa1071590:three_prime_UTR |
| CCTATTAGCAATTACAGCTT+TGG | 0.340233 | 7_2:+68340165 | Msa1071590:CDS |
| CAAAGCTGTAATTGCTAATA+GGG | 0.344245 | 7_2:-68340164 | None:intergenic |
| TCAGCCGCCATCGGTTTATT+AGG | 0.348688 | 7_2:-68341828 | None:intergenic |
| TTTGAAATTTGATCCTATCT+TGG | 0.352247 | 7_2:+68342660 | Msa1071590:three_prime_UTR |
| CTCCTAGACTTAAACTCCTT+TGG | 0.357491 | 7_2:-68339952 | None:intergenic |
| GCTTTCTTTGTTGCCCCAAC+TGG | 0.358676 | 7_2:+68341368 | Msa1071590:CDS |
| AGTTATCAACAAGCTGAAAA+TGG | 0.359783 | 7_2:+68342112 | Msa1071590:CDS |
| TTGTATTGTCCTTTGCCTCT+TGG | 0.365164 | 7_2:-68342264 | None:intergenic |
| AGGACTCCCGTCACCTCCTT+TGG | 0.378418 | 7_2:+68341337 | Msa1071590:CDS |
| TTACTTTCGTTCATCGAATT+CGG | 0.381995 | 7_2:+68339879 | Msa1071590:CDS |
| AATTTGCAGTCAACTGAGAT+TGG | 0.383050 | 7_2:+68340669 | Msa1071590:intron |
| AAACCGATGGCGGCTGATAC+TGG | 0.392097 | 7_2:+68341834 | Msa1071590:CDS |
| CGTTGGACAGACCCTTGCTT+TGG | 0.393563 | 7_2:-68342308 | None:intergenic |
| TGTTATGCTGAATCGTTGTA+AGG | 0.399819 | 7_2:+68340002 | Msa1071590:CDS |
| GTGCTGACTCTTGTTGTCCT+TGG | 0.405815 | 7_2:-68341778 | None:intergenic |
| GTTTCCAAAATTCAATAGCT+TGG | 0.413093 | 7_2:+68342912 | Msa1071590:three_prime_UTR |
| TTGTCACGGTTCTTGTTGAA+TGG | 0.419455 | 7_2:-68341681 | None:intergenic |
| GTACTCAAAGTTTAAACCTT+GGG | 0.422898 | 7_2:-68342606 | None:intergenic |
| GATTGCAGTAGGGAAGAAAA+TGG | 0.423504 | 7_2:+68340126 | Msa1071590:CDS |
| CGGAAATCACAATCGGCAAT+GGG | 0.431117 | 7_2:+68342349 | Msa1071590:CDS |
| AGAGTTCAATTGTACCAGTT+GGG | 0.432169 | 7_2:-68341382 | None:intergenic |
| TTGGGATTGAAGATGAAGTC+AGG | 0.434760 | 7_2:+68339835 | Msa1071590:intron |
| GATCCTATCTTGGAGTTCCA+TGG | 0.440157 | 7_2:+68342670 | Msa1071590:three_prime_UTR |
| AGCTCTTGGCACTCAAACTA+AGG | 0.440911 | 7_2:+68341716 | Msa1071590:CDS |
| GTCCAAGTGTTCAGATGATT+CGG | 0.441028 | 7_2:+68342054 | Msa1071590:CDS |
| CCGTCACCTCCTTTGGATGA+AGG | 0.458747 | 7_2:+68341344 | Msa1071590:CDS |
| AAGCCATGGAACTCCAAGAT+AGG | 0.459185 | 7_2:-68342673 | None:intergenic |
| CTGTCTTTCTTCCGTTGTCA+CGG | 0.459719 | 7_2:-68341695 | None:intergenic |
| TGAGAGTTCGTGCTAGTTGA+CGG | 0.465786 | 7_2:-68340734 | None:intergenic |
| CGTCACCTCCTTTGGATGAA+GGG | 0.466548 | 7_2:+68341345 | Msa1071590:CDS |
| CATGTGATTATGTAATAAGC+AGG | 0.469847 | 7_2:+68342853 | Msa1071590:three_prime_UTR |
| ATGTTTGTAGCTTCAGAAGA+AGG | 0.472561 | 7_2:+68341260 | Msa1071590:intron |
| AGCATGTTCTCTAAAGATGA+AGG | 0.472793 | 7_2:+68342423 | Msa1071590:three_prime_UTR |
| TCATCACCATTATCATCATC+AGG | 0.473283 | 7_2:-68340051 | None:intergenic |
| GTTTGAAATGTGTATTCCGT+TGG | 0.475671 | 7_2:-68342325 | None:intergenic |
| GGGCATTGAGAGGCCTCTTA+GGG | 0.490032 | 7_2:-68341941 | None:intergenic |
| GAGTTTAAGTCTAGGAGAGA+TGG | 0.491402 | 7_2:+68339958 | Msa1071590:CDS |
| AACGGAAGAAAGACAGCTCT+TGG | 0.493030 | 7_2:+68341702 | Msa1071590:CDS |
| TGTACTCAAAGTTTAAACCT+TGG | 0.494198 | 7_2:-68342607 | None:intergenic |
| ACAGATGGATTTCTGGAATC+CGG | 0.496893 | 7_2:-68341287 | None:intergenic |
| GCAAAGGACAATACAAGTAA+TGG | 0.500794 | 7_2:+68342271 | Msa1071590:CDS |
| CCGGAAATCACAATCGGCAA+TGG | 0.503234 | 7_2:+68342348 | Msa1071590:CDS |
| GAAAATGAAGAAGAGGAAGA+AGG | 0.503793 | 7_2:+68341314 | Msa1071590:CDS |
| TAAGATGTCCAGAAACGATT+GGG | 0.504122 | 7_2:-68342731 | None:intergenic |
| CAAGAGAAGTTCTGTTAGAG+AGG | 0.509666 | 7_2:+68340080 | Msa1071590:CDS |
| AAGATTATACCTCATCTTCA+CGG | 0.513302 | 7_2:-68340272 | None:intergenic |
| TGCTGCTTCTGATTGTCCAA+AGG | 0.514908 | 7_2:+68339936 | Msa1071590:CDS |
| GCTGGTCAATGCGTGGGTGA+AGG | 0.515961 | 7_2:+68341110 | Msa1071590:CDS |
| AGAGCAAGGTGGATTGCAGT+AGG | 0.520399 | 7_2:+68340115 | Msa1071590:CDS |
| TTTCTATGCTCTCAAGGAGG+GGG | 0.522651 | 7_2:-68342498 | None:intergenic |
| GCAATCACAACTTGCTGCTG+AGG | 0.525782 | 7_2:+68340221 | Msa1071590:CDS |
| CACAATCGGCAATGGGGCAA+CGG | 0.528995 | 7_2:+68342356 | Msa1071590:CDS |
| CTTGTTGTCCTTGGCAGTGA+CGG | 0.530853 | 7_2:-68341769 | None:intergenic |
| AGCCGAATCATCTGAACACT+TGG | 0.534167 | 7_2:-68342056 | None:intergenic |
| ATAAATGATCTTCCAAAGCA+AGG | 0.538473 | 7_2:+68342296 | Msa1071590:CDS |
| ACATCTTGCTGGGCATTGAG+AGG | 0.541123 | 7_2:-68341951 | None:intergenic |
| GTCACCTCCTTTGGATGAAG+GGG | 0.541178 | 7_2:+68341346 | Msa1071590:CDS |
| GTGAATCATCTAAGAAAGCA+TGG | 0.544384 | 7_2:+68340699 | Msa1071590:CDS |
| GGTTTAAACTTTGAGTACAT+AGG | 0.545160 | 7_2:+68342611 | Msa1071590:three_prime_UTR |
| GGGTGCTAGCAAAGAGAGCA+AGG | 0.546467 | 7_2:+68340101 | Msa1071590:CDS |
| TAATTGCAGCCAAGAGGCAA+AGG | 0.551496 | 7_2:+68342255 | Msa1071590:intron |
| TCAAACCCGGAAATCACAAT+CGG | 0.553682 | 7_2:+68342342 | Msa1071590:CDS |
| TGTAAAGTTCTTCGATGGCA+TGG | 0.555348 | 7_2:+68341514 | Msa1071590:intron |
| TGTTGTTGAAAATGAAGAAG+AGG | 0.557042 | 7_2:+68341307 | Msa1071590:CDS |
| CATGTTGCTACAGTCTGACT+CGG | 0.562250 | 7_2:+68340488 | Msa1071590:intron |
| ACGGCTGTTTCATTAGATGC+CGG | 0.562358 | 7_2:-68341750 | None:intergenic |
| TAAATGATCTTCCAAAGCAA+GGG | 0.564834 | 7_2:+68342297 | Msa1071590:CDS |
| GAGAGTTCAATTGTACCAGT+TGG | 0.566913 | 7_2:-68341383 | None:intergenic |
| CCTTCATCCAAAGGAGGTGA+CGG | 0.567401 | 7_2:-68341344 | None:intergenic |
| CGGAATACACATTTCAAACC+CGG | 0.569195 | 7_2:+68342329 | Msa1071590:CDS |
| TTCGATGGCATGGATGATGA+TGG | 0.571056 | 7_2:+68341524 | Msa1071590:CDS |
| GAGTTCAATTGTACCAGTTG+GGG | 0.574661 | 7_2:-68341381 | None:intergenic |
| GTAAGATGTCCAGAAACGAT+TGG | 0.574945 | 7_2:-68342732 | None:intergenic |
| TAGGGAAGAAAATGGAGTGA+TGG | 0.575118 | 7_2:+68340134 | Msa1071590:CDS |
| CTTCATCCAAAGGAGGTGAC+GGG | 0.575720 | 7_2:-68341343 | None:intergenic |
| TGGTACAATTGAACTCTCAC+AGG | 0.578719 | 7_2:+68341388 | Msa1071590:CDS |
| GTTATGCTGAATCGTTGTAA+GGG | 0.581949 | 7_2:+68340003 | Msa1071590:CDS |
| GAGCAAGGTGGATTGCAGTA+GGG | 0.582197 | 7_2:+68340116 | Msa1071590:CDS |
| AGGCATCTTCGGCTCCACAT+TGG | 0.582725 | 7_2:-68341895 | None:intergenic |
| AAAACAGTACTGTCCCTAAG+AGG | 0.584288 | 7_2:+68341928 | Msa1071590:CDS |
| AAGAAAGCCCCTTCATCCAA+AGG | 0.586587 | 7_2:-68341353 | None:intergenic |
| TTCTAGTGGATGGAAAGAGC+TGG | 0.587363 | 7_2:+68341092 | Msa1071590:intron |
| TCAACAACCACACCTGTCGC+AGG | 0.591937 | 7_2:+68341135 | Msa1071590:CDS |
| CAAAGCAAGGGTCTGTCCAA+CGG | 0.592243 | 7_2:+68342309 | Msa1071590:CDS |
| TGGGATTGAAGATGAAGTCA+GGG | 0.594781 | 7_2:+68339836 | Msa1071590:intron |
| TCTAAGAAAGCATGGATCGA+AGG | 0.595986 | 7_2:+68340707 | Msa1071590:CDS |
| AATGAAGAAGAGGAAGAAGG+AGG | 0.597918 | 7_2:+68341317 | Msa1071590:CDS |
| GAAACATCGATTATTTCCCA+AGG | 0.598777 | 7_2:+68342590 | Msa1071590:three_prime_UTR |
| AAGAGAAGTTCTGTTAGAGA+GGG | 0.600208 | 7_2:+68340081 | Msa1071590:CDS |
| ACTCTCTGTCGATCTTCTGA+AGG | 0.600474 | 7_2:+68340548 | Msa1071590:CDS |
| TTCTATGCTCTCAAGGAGGG+GGG | 0.604868 | 7_2:-68342497 | None:intergenic |
| GACGATGTAAAGTTCTTCGA+TGG | 0.605011 | 7_2:+68341509 | Msa1071590:intron |
| AATTATTAATTGCAGCCAAG+AGG | 0.608124 | 7_2:+68342249 | Msa1071590:intron |
| GGAACAATCCAATTAAGCCA+TGG | 0.608967 | 7_2:-68342687 | None:intergenic |
| CGACCAGTATCAGCCGCCAT+CGG | 0.609021 | 7_2:-68341837 | None:intergenic |
| TGAAACAGCCGTCACTGCCA+AGG | 0.610149 | 7_2:+68341761 | Msa1071590:CDS |
| GCAGTCAACTGAGATTGGAA+AGG | 0.610845 | 7_2:+68340674 | Msa1071590:intron |
| TGCTGTTTGAGTCTCTGAGG+AGG | 0.611179 | 7_2:+68340511 | Msa1071590:CDS |
| AATTCGACCTGCGACAGGTG+TGG | 0.612456 | 7_2:-68341142 | None:intergenic |
| CATTCAGCGAAAAGCCAATG+TGG | 0.612860 | 7_2:+68341881 | Msa1071590:CDS |
| TCTCAATAACCGTGAAGATG+AGG | 0.613333 | 7_2:+68340263 | Msa1071590:CDS |
| CAGGGTCACTTGATCAGTGG+AGG | 0.617583 | 7_2:+68339854 | Msa1071590:CDS |
| TTCAACAAGAACCGTGACAA+CGG | 0.624350 | 7_2:+68341684 | Msa1071590:CDS |
| GGAAAGAGCTGGTCAATGCG+TGG | 0.625905 | 7_2:+68341103 | Msa1071590:CDS |
| GTCCAAAGGAGTTTAAGTCT+AGG | 0.627009 | 7_2:+68339950 | Msa1071590:CDS |
| TCTGTGCCTGATGATGATAA+TGG | 0.629006 | 7_2:+68340045 | Msa1071590:CDS |
| CGGTGCTGTTTGAGTCTCTG+AGG | 0.632670 | 7_2:+68340508 | Msa1071590:CDS |
| GAAAGAGCTGGTCAATGCGT+GGG | 0.636719 | 7_2:+68341104 | Msa1071590:CDS |
| TCGTTGTAAGGGGTGTGAGA+AGG | 0.640457 | 7_2:+68340014 | Msa1071590:CDS |
| AAGCAGCAACAACAATTGCA+TGG | 0.641026 | 7_2:-68339921 | None:intergenic |
| AGTCAGGGTCACTTGATCAG+TGG | 0.646882 | 7_2:+68339851 | Msa1071590:CDS |
| AGCTTCAGAAGAAGGCACAC+CGG | 0.647483 | 7_2:+68341268 | Msa1071590:intron |
| CACATGAAAGAATTTACACA+AGG | 0.653834 | 7_2:-68342836 | None:intergenic |
| GGTGAGGCCTAATAAACCGA+TGG | 0.659654 | 7_2:+68341821 | Msa1071590:CDS |
| TTATGCTGAATCGTTGTAAG+GGG | 0.662020 | 7_2:+68340004 | Msa1071590:CDS |
| GAGGCCTAATAAACCGATGG+CGG | 0.667726 | 7_2:+68341824 | Msa1071590:CDS |
| TTGGCACTCAAACTAAGGAG+AGG | 0.668123 | 7_2:+68341721 | Msa1071590:CDS |
| AAAGCCCCTTCATCCAAAGG+AGG | 0.683333 | 7_2:-68341350 | None:intergenic |
| GGAAATCACAATCGGCAATG+GGG | 0.692012 | 7_2:+68342350 | Msa1071590:CDS |
| TGCTAGCAAAGAGAGCAAGG+TGG | 0.724881 | 7_2:+68340104 | Msa1071590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTAAATTTGATATTCT+GGG | - | chr7_2:68339566-68339585 | None:intergenic | 10.0% |
| !! | TTAATTTAAATTTGATATTC+TGG | - | chr7_2:68339567-68339586 | None:intergenic | 10.0% |
| !! | ATTGTTTATTATAACATATT+TGG | + | chr7_2:68339777-68339796 | Msa1071590:intron | 10.0% |
| !! | AATTTAAATTTGATATTCTG+GGG | - | chr7_2:68339565-68339584 | None:intergenic | 15.0% |
| !!! | AGTATGATTTATTTTTTTCA+TGG | + | chr7_2:68340760-68340779 | Msa1071590:intron | 15.0% |
| !! | ATTACAAAATTAATTCATGT+TGG | + | chr7_2:68341223-68341242 | Msa1071590:intron | 15.0% |
| !!! | TTAAATTGATGATTGTAAAT+GGG | + | chr7_2:68341627-68341646 | Msa1071590:intron | 15.0% |
| !! | ATTTCTATTGACAATAATTA+TGG | - | chr7_2:68342711-68342730 | None:intergenic | 15.0% |
| !!! | ATTGATTCTTTTGTTGTTTT+GGG | + | chr7_2:68339817-68339836 | Msa1071590:intron | 20.0% |
| !!! | TGTTTTGATATGGTTTTTTT+TGG | + | chr7_2:68340393-68340412 | Msa1071590:intron | 20.0% |
| !!! | TGGTTTATTTTATACAATCA+TGG | + | chr7_2:68340808-68340827 | Msa1071590:intron | 20.0% |
| !! | AAAATGGTTCAAATTAACTA+AGG | - | chr7_2:68340895-68340914 | None:intergenic | 20.0% |
| !! | GATATGAATCAAAACAATAA+CGG | - | chr7_2:68340983-68341002 | None:intergenic | 20.0% |
| !!! | TAATCTTTTCTAATTTCTAG+TGG | + | chr7_2:68341078-68341097 | Msa1071590:intron | 20.0% |
| !! | TTGAAATATAAGTTTGAGAA+TGG | - | chr7_2:68341436-68341455 | None:intergenic | 20.0% |
| !! | TTCTCAAACTTATATTTCAA+AGG | + | chr7_2:68341436-68341455 | Msa1071590:intron | 20.0% |
| !! | TGTATATATGAAACTGAATT+TGG | + | chr7_2:68341460-68341479 | Msa1071590:intron | 20.0% |
| !! | GTATATATGAAACTGAATTT+GGG | + | chr7_2:68341461-68341480 | Msa1071590:intron | 20.0% |
| !!! | CTTAAATTGATGATTGTAAA+TGG | + | chr7_2:68341626-68341645 | Msa1071590:intron | 20.0% |
| !!! | TAAATTGATGATTGTAAATG+GGG | + | chr7_2:68341628-68341647 | Msa1071590:intron | 20.0% |
| !! | AAACTCTATTCAAGTAAAAA+TGG | - | chr7_2:68342542-68342561 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATCCAAGAATAT+TGG | + | chr7_2:68342636-68342655 | Msa1071590:three_prime_UTR | 20.0% |
| !! | AATTTCAAATCCAATATTCT+TGG | - | chr7_2:68342649-68342668 | None:intergenic | 20.0% |
| !! | ACATTTATATTACTTGCATT+AGG | + | chr7_2:68342762-68342781 | Msa1071590:three_prime_UTR | 20.0% |
| !! | CATTTATATTACTTGCATTA+GGG | + | chr7_2:68342763-68342782 | Msa1071590:three_prime_UTR | 20.0% |
| !!! | AAGGTTATTTCTTCTTTTTG+AGG | + | chr7_2:68339293-68339312 | Msa1071590:five_prime_UTR | 25.0% |
| !!! | TTTCTTCTTTTTGAGGTTTT+TGG | + | chr7_2:68339300-68339319 | Msa1071590:five_prime_UTR | 25.0% |
| !! | TGTATTGTTTCACATTTTTC+TGG | - | chr7_2:68339338-68339357 | None:intergenic | 25.0% |
| ! | AATTTGATTGGATCAATGTT+CGG | - | chr7_2:68339527-68339546 | None:intergenic | 25.0% |
| !! | TCCAATCAAATTTTCCTAAA+TGG | + | chr7_2:68339535-68339554 | Msa1071590:intron | 25.0% |
| !! | CCAATCAAATTTTCCTAAAT+GGG | + | chr7_2:68339536-68339555 | Msa1071590:intron | 25.0% |
| !!! | TTTCGTCATTGTTTTATTCA+GGG | + | chr7_2:68339673-68339692 | Msa1071590:intron | 25.0% |
| !!! | AACTCAATTTTTTCTCACTT+GGG | - | chr7_2:68339743-68339762 | None:intergenic | 25.0% |
| !!! | AAACTCAATTTTTTCTCACT+TGG | - | chr7_2:68339744-68339763 | None:intergenic | 25.0% |
| !!! | AAAAATTGAGTTTTGAATCG+TGG | + | chr7_2:68339751-68339770 | Msa1071590:intron | 25.0% |
| !!! | AAAATTGAGTTTTGAATCGT+GGG | + | chr7_2:68339752-68339771 | Msa1071590:intron | 25.0% |
| !!! | GATTGATTCTTTTGTTGTTT+TGG | + | chr7_2:68339816-68339835 | Msa1071590:intron | 25.0% |
| !! | ATGTTTGATGTGATGATTTT+TGG | + | chr7_2:68340362-68340381 | Msa1071590:intron | 25.0% |
| !!! | TTGATATGGTTTTTTTTGGA+TGG | + | chr7_2:68340397-68340416 | Msa1071590:intron | 25.0% |
| !! | AACAATCTTAAAAAAAGCAC+TGG | - | chr7_2:68340628-68340647 | None:intergenic | 25.0% |
| ! | TCACTATCATTACATAATCA+TGG | + | chr7_2:68340855-68340874 | Msa1071590:intron | 25.0% |
| !! | ATCTGTTGAATGTTTTCAAT+TGG | + | chr7_2:68341025-68341044 | Msa1071590:intron | 25.0% |
| !!! | AGTTTAGAATTTGAGTTGTT+CGG | - | chr7_2:68341054-68341073 | None:intergenic | 25.0% |
| !! | TTTTATCTACCTTATTAGTG+TGG | + | chr7_2:68341165-68341184 | Msa1071590:intron | 25.0% |
| ! | ATAAGTTTGAGAATGGAAAA+AGG | - | chr7_2:68341429-68341448 | None:intergenic | 25.0% |
| !! | GCATTAATTTTGTAAGTTTG+TGG | + | chr7_2:68341999-68342018 | Msa1071590:intron | 25.0% |
| !!! | CTTCTGAAACACAAAAATTA+AGG | - | chr7_2:68342035-68342054 | None:intergenic | 25.0% |
| ! | TCTTCTATCCATTAAATGTT+TGG | - | chr7_2:68342472-68342491 | None:intergenic | 25.0% |
| !!! | AGAGTTTATTTTGATTGTAG+AGG | + | chr7_2:68342555-68342574 | Msa1071590:three_prime_UTR | 25.0% |
| !!! | GAGTTTATTTTGATTGTAGA+GGG | + | chr7_2:68342556-68342575 | Msa1071590:three_prime_UTR | 25.0% |
| !! | TTTGAAATTTGATCCTATCT+TGG | + | chr7_2:68342660-68342679 | Msa1071590:three_prime_UTR | 25.0% |
| ! | TATGTAATAAGCAGGTTTAT+AGG | + | chr7_2:68342861-68342880 | Msa1071590:three_prime_UTR | 25.0% |
| !!! | GTGTTGTTTTCTTTTGTTTC+TGG | + | chr7_2:68339412-68339431 | Msa1071590:intron | 30.0% |
| !! | TTTTGGATTTGGAACAGATT+CGG | - | chr7_2:68339457-68339476 | None:intergenic | 30.0% |
| !!! | TGATGATATGGTTTTGGATT+TGG | - | chr7_2:68339468-68339487 | None:intergenic | 30.0% |
| !! | TGATGATGATGATATGGTTT+TGG | - | chr7_2:68339474-68339493 | None:intergenic | 30.0% |
| ! | GAAAATTGGATATGATGATG+AGG | - | chr7_2:68339501-68339520 | None:intergenic | 30.0% |
| TCAATGTTCGGTAAGAAAAT+TGG | - | chr7_2:68339515-68339534 | None:intergenic | 30.0% | |
| CCCATTTAGGAAAATTTGAT+TGG | - | chr7_2:68339539-68339558 | None:intergenic | 30.0% | |
| TGACGAAAGAATGATCAAAA+GGG | - | chr7_2:68339661-68339680 | None:intergenic | 30.0% | |
| ATGACGAAAGAATGATCAAA+AGG | - | chr7_2:68339662-68339681 | None:intergenic | 30.0% | |
| !! | CTTTCGTCATTGTTTTATTC+AGG | + | chr7_2:68339672-68339691 | Msa1071590:intron | 30.0% |
| !! | AATTGGTTTGATTCTTCTTC+AGG | - | chr7_2:68339712-68339731 | None:intergenic | 30.0% |
| TTACTTTCGTTCATCGAATT+CGG | + | chr7_2:68339879-68339898 | Msa1071590:CDS | 30.0% | |
| CAAAGCTGTAATTGCTAATA+GGG | - | chr7_2:68340167-68340186 | None:intergenic | 30.0% | |
| AAGATTATACCTCATCTTCA+CGG | - | chr7_2:68340275-68340294 | None:intergenic | 30.0% | |
| !! | TGATGTGATGATTTTTGGAA+AGG | + | chr7_2:68340367-68340386 | Msa1071590:intron | 30.0% |
| !!! | GGAAAGGATATGTTTTGATA+TGG | + | chr7_2:68340383-68340402 | Msa1071590:intron | 30.0% |
| !! | GCATTTTTGTTCTTGTTTGA+AGG | + | chr7_2:68340419-68340438 | Msa1071590:intron | 30.0% |
| TGAATCTTTCTTTATCGCTT+TGG | + | chr7_2:68340578-68340597 | Msa1071590:intron | 30.0% | |
| GAATCTTTCTTTATCGCTTT+GGG | + | chr7_2:68340579-68340598 | Msa1071590:intron | 30.0% | |
| AATCTTTCTTTATCGCTTTG+GGG | + | chr7_2:68340580-68340599 | Msa1071590:intron | 30.0% | |
| CACATGACTAACTAAGAAAA+TGG | - | chr7_2:68340911-68340930 | None:intergenic | 30.0% | |
| ! | TCATTCACCTATCTAAAGTT+TGG | - | chr7_2:68340955-68340974 | None:intergenic | 30.0% |
| !!! | CTTTTCTAATTTCTAGTGGA+TGG | + | chr7_2:68341082-68341101 | Msa1071590:intron | 30.0% |
| TCATCAATACCACACTAATA+AGG | - | chr7_2:68341177-68341196 | None:intergenic | 30.0% | |
| ATTGATGAGTACAATTATGC+TGG | + | chr7_2:68341189-68341208 | Msa1071590:intron | 30.0% | |
| ! | TCTTCATTTTCAACAACAGA+TGG | - | chr7_2:68341305-68341324 | None:intergenic | 30.0% |
| TGTTGTTGAAAATGAAGAAG+AGG | + | chr7_2:68341307-68341326 | Msa1071590:CDS | 30.0% | |
| TTCCTTGTGTTGTATATATC+TGG | + | chr7_2:68341487-68341506 | Msa1071590:intron | 30.0% | |
| ! | AATCATCAATTTAAGACGAG+GGG | - | chr7_2:68341621-68341640 | None:intergenic | 30.0% |
| ! | CAATCATCAATTTAAGACGA+GGG | - | chr7_2:68341622-68341641 | None:intergenic | 30.0% |
| ! | ACAATCATCAATTTAAGACG+AGG | - | chr7_2:68341623-68341642 | None:intergenic | 30.0% |
| ! | TATTTTGCTTACATCTTGCT+GGG | - | chr7_2:68341964-68341983 | None:intergenic | 30.0% |
| !! | TTATTTTGCTTACATCTTGC+TGG | - | chr7_2:68341965-68341984 | None:intergenic | 30.0% |
| AGTTATCAACAAGCTGAAAA+TGG | + | chr7_2:68342112-68342131 | Msa1071590:CDS | 30.0% | |
| CATCAATGAGTTATGAATTG+AGG | - | chr7_2:68342217-68342236 | None:intergenic | 30.0% | |
| AATTATTAATTGCAGCCAAG+AGG | + | chr7_2:68342249-68342268 | Msa1071590:intron | 30.0% | |
| ATAAATGATCTTCCAAAGCA+AGG | + | chr7_2:68342296-68342315 | Msa1071590:CDS | 30.0% | |
| TAAATGATCTTCCAAAGCAA+GGG | + | chr7_2:68342297-68342316 | Msa1071590:CDS | 30.0% | |
| ! | AAGATAGAGCAACTATTTTC+AGG | + | chr7_2:68342382-68342401 | Msa1071590:exon | 30.0% |
| !!! | TGTTATTTTCTATGCTCTCA+AGG | - | chr7_2:68342507-68342526 | None:intergenic | 30.0% |
| GTACTCAAAGTTTAAACCTT+GGG | - | chr7_2:68342609-68342628 | None:intergenic | 30.0% | |
| TGTACTCAAAGTTTAAACCT+TGG | - | chr7_2:68342610-68342629 | None:intergenic | 30.0% | |
| GGTTTAAACTTTGAGTACAT+AGG | + | chr7_2:68342611-68342630 | Msa1071590:three_prime_UTR | 30.0% | |
| CACATGAAAGAATTTACACA+AGG | - | chr7_2:68342839-68342858 | None:intergenic | 30.0% | |
| CATGTGATTATGTAATAAGC+AGG | + | chr7_2:68342853-68342872 | Msa1071590:three_prime_UTR | 30.0% | |
| GTTTCCAAAATTCAATAGCT+TGG | + | chr7_2:68342912-68342931 | Msa1071590:three_prime_UTR | 30.0% | |
| ! | AACTCCAAGCTATTGAATTT+TGG | - | chr7_2:68342919-68342938 | None:intergenic | 30.0% |
| ! | GGATGATGATGATGATGATA+TGG | - | chr7_2:68339480-68339499 | None:intergenic | 35.0% |
| TCACTTGGGTCATTGAAAAT+TGG | - | chr7_2:68339729-68339748 | None:intergenic | 35.0% | |
| TGTTATGCTGAATCGTTGTA+AGG | + | chr7_2:68340002-68340021 | Msa1071590:CDS | 35.0% | |
| GTTATGCTGAATCGTTGTAA+GGG | + | chr7_2:68340003-68340022 | Msa1071590:CDS | 35.0% | |
| TTATGCTGAATCGTTGTAAG+GGG | + | chr7_2:68340004-68340023 | Msa1071590:CDS | 35.0% | |
| TCATCACCATTATCATCATC+AGG | - | chr7_2:68340054-68340073 | None:intergenic | 35.0% | |
| AAGAGAAGTTCTGTTAGAGA+GGG | + | chr7_2:68340081-68340100 | Msa1071590:CDS | 35.0% | |
| CCAAAGCTGTAATTGCTAAT+AGG | - | chr7_2:68340168-68340187 | None:intergenic | 35.0% | |
| CCTATTAGCAATTACAGCTT+TGG | + | chr7_2:68340165-68340184 | Msa1071590:CDS | 35.0% | |
| ATCTTTCTTTATCGCTTTGG+GGG | + | chr7_2:68340581-68340600 | Msa1071590:intron | 35.0% | |
| AATTTGCAGTCAACTGAGAT+TGG | + | chr7_2:68340669-68340688 | Msa1071590:intron | 35.0% | |
| GTGAATCATCTAAGAAAGCA+TGG | + | chr7_2:68340699-68340718 | Msa1071590:CDS | 35.0% | |
| ATTGACGCCAAACTTTAGAT+AGG | + | chr7_2:68340945-68340964 | Msa1071590:intron | 35.0% | |
| CTTTAGATAGGTGAATGACT+TGG | + | chr7_2:68340957-68340976 | Msa1071590:intron | 35.0% | |
| ATGTTTGTAGCTTCAGAAGA+AGG | + | chr7_2:68341260-68341279 | Msa1071590:intron | 35.0% | |
| ! | TTCAACAACAGATGGATTTC+TGG | - | chr7_2:68341297-68341316 | None:intergenic | 35.0% |
| GAAAATGAAGAAGAGGAAGA+AGG | + | chr7_2:68341314-68341333 | Msa1071590:CDS | 35.0% | |
| AGAGTTCAATTGTACCAGTT+GGG | - | chr7_2:68341385-68341404 | None:intergenic | 35.0% | |
| GTCCAGATATATACAACACA+AGG | - | chr7_2:68341492-68341511 | None:intergenic | 35.0% | |
| ! | AACTAAGGAGAGGAATTTTC+CGG | + | chr7_2:68341731-68341750 | Msa1071590:CDS | 35.0% |
| ! | GTACTGTTTTCCATTTTCAG+AGG | - | chr7_2:68341918-68341937 | None:intergenic | 35.0% |
| GCAAAGGACAATACAAGTAA+TGG | + | chr7_2:68342271-68342290 | Msa1071590:CDS | 35.0% | |
| ! | GTTTGAAATGTGTATTCCGT+TGG | - | chr7_2:68342328-68342347 | None:intergenic | 35.0% |
| !! | ATAGAGCAACTATTTTCAGG+AGG | + | chr7_2:68342385-68342404 | Msa1071590:exon | 35.0% |
| !! | TAGAGCAACTATTTTCAGGA+GGG | + | chr7_2:68342386-68342405 | Msa1071590:exon | 35.0% |
| ! | AGCATGTTCTCTAAAGATGA+AGG | + | chr7_2:68342423-68342442 | Msa1071590:three_prime_UTR | 35.0% |
| TGCTTTCGCCAAACATTTAA+TGG | + | chr7_2:68342461-68342480 | Msa1071590:three_prime_UTR | 35.0% | |
| ! | ATTTTCTATGCTCTCAAGGA+GGG | - | chr7_2:68342503-68342522 | None:intergenic | 35.0% |
| ! | TATTTTCTATGCTCTCAAGG+AGG | - | chr7_2:68342504-68342523 | None:intergenic | 35.0% |
| ! | GAAACATCGATTATTTCCCA+AGG | + | chr7_2:68342590-68342609 | Msa1071590:three_prime_UTR | 35.0% |
| ATAGAAATCCCAATCGTTTC+TGG | + | chr7_2:68342723-68342742 | Msa1071590:three_prime_UTR | 35.0% | |
| TAAGATGTCCAGAAACGATT+GGG | - | chr7_2:68342734-68342753 | None:intergenic | 35.0% | |
| !! | TATTCTGGGGTATCCCATTT+AGG | - | chr7_2:68339552-68339571 | None:intergenic | 40.0% |
| TTGGGATTGAAGATGAAGTC+AGG | + | chr7_2:68339835-68339854 | Msa1071590:intron | 40.0% | |
| TGGGATTGAAGATGAAGTCA+GGG | + | chr7_2:68339836-68339855 | Msa1071590:intron | 40.0% | |
| AAGCAGCAACAACAATTGCA+TGG | - | chr7_2:68339924-68339943 | None:intergenic | 40.0% | |
| GTCCAAAGGAGTTTAAGTCT+AGG | + | chr7_2:68339950-68339969 | Msa1071590:CDS | 40.0% | |
| CTCCTAGACTTAAACTCCTT+TGG | - | chr7_2:68339955-68339974 | None:intergenic | 40.0% | |
| GAGTTTAAGTCTAGGAGAGA+TGG | + | chr7_2:68339958-68339977 | Msa1071590:CDS | 40.0% | |
| ! | TCTGTGCCTGATGATGATAA+TGG | + | chr7_2:68340045-68340064 | Msa1071590:CDS | 40.0% |
| CAAGAGAAGTTCTGTTAGAG+AGG | + | chr7_2:68340080-68340099 | Msa1071590:CDS | 40.0% | |
| GATTGCAGTAGGGAAGAAAA+TGG | + | chr7_2:68340126-68340145 | Msa1071590:CDS | 40.0% | |
| TAGGGAAGAAAATGGAGTGA+TGG | + | chr7_2:68340134-68340153 | Msa1071590:CDS | 40.0% | |
| TCTCAATAACCGTGAAGATG+AGG | + | chr7_2:68340263-68340282 | Msa1071590:CDS | 40.0% | |
| ! | TCTAAGAAAGCATGGATCGA+AGG | + | chr7_2:68340707-68340726 | Msa1071590:CDS | 40.0% |
| TGTTTCTTGTCTGCGAATTG+TGG | + | chr7_2:68340788-68340807 | Msa1071590:intron | 40.0% | |
| TGGCGTCAATGTTAACATCA+TGG | - | chr7_2:68340935-68340954 | None:intergenic | 40.0% | |
| TAAAAAATTCGACCTGCGAC+AGG | - | chr7_2:68341150-68341169 | None:intergenic | 40.0% | |
| !! | ACAGATGGATTTCTGGAATC+CGG | - | chr7_2:68341290-68341309 | None:intergenic | 40.0% |
| AATGAAGAAGAGGAAGAAGG+AGG | + | chr7_2:68341317-68341336 | Msa1071590:CDS | 40.0% | |
| GAGTTCAATTGTACCAGTTG+GGG | - | chr7_2:68341384-68341403 | None:intergenic | 40.0% | |
| GAGAGTTCAATTGTACCAGT+TGG | - | chr7_2:68341386-68341405 | None:intergenic | 40.0% | |
| TGGTACAATTGAACTCTCAC+AGG | + | chr7_2:68341388-68341407 | Msa1071590:CDS | 40.0% | |
| GACGATGTAAAGTTCTTCGA+TGG | + | chr7_2:68341509-68341528 | Msa1071590:intron | 40.0% | |
| TGTAAAGTTCTTCGATGGCA+TGG | + | chr7_2:68341514-68341533 | Msa1071590:intron | 40.0% | |
| ! | CTACCTAGCTTTCGTTGTTA+CGG | + | chr7_2:68341580-68341599 | Msa1071590:intron | 40.0% |
| TTGTCACGGTTCTTGTTGAA+TGG | - | chr7_2:68341684-68341703 | None:intergenic | 40.0% | |
| TTCAACAAGAACCGTGACAA+CGG | + | chr7_2:68341684-68341703 | Msa1071590:CDS | 40.0% | |
| TCAGCACATGAAGAAAAACG+AGG | + | chr7_2:68341794-68341813 | Msa1071590:CDS | 40.0% | |
| ! | CGCTGAATGTTTGAGTTTAG+TGG | - | chr7_2:68341870-68341889 | None:intergenic | 40.0% |
| !!! | TCCATTTTCAGAGGCATCTT+CGG | - | chr7_2:68341909-68341928 | None:intergenic | 40.0% |
| AAAACAGTACTGTCCCTAAG+AGG | + | chr7_2:68341928-68341947 | Msa1071590:CDS | 40.0% | |
| GTCCAAGTGTTCAGATGATT+CGG | + | chr7_2:68342054-68342073 | Msa1071590:CDS | 40.0% | |
| TTGTATTGTCCTTTGCCTCT+TGG | - | chr7_2:68342267-68342286 | None:intergenic | 40.0% | |
| CGGAATACACATTTCAAACC+CGG | + | chr7_2:68342329-68342348 | Msa1071590:CDS | 40.0% | |
| TCAAACCCGGAAATCACAAT+CGG | + | chr7_2:68342342-68342361 | Msa1071590:CDS | 40.0% | |
| ! | TTTTCTATGCTCTCAAGGAG+GGG | - | chr7_2:68342502-68342521 | None:intergenic | 40.0% |
| TTGGAGTTCCATGGCTTAAT+TGG | + | chr7_2:68342679-68342698 | Msa1071590:three_prime_UTR | 40.0% | |
| GGAACAATCCAATTAAGCCA+TGG | - | chr7_2:68342690-68342709 | None:intergenic | 40.0% | |
| GTAAGATGTCCAGAAACGAT+TGG | - | chr7_2:68342735-68342754 | None:intergenic | 40.0% | |
| ! | TGCTGCTTCTGATTGTCCAA+AGG | + | chr7_2:68339936-68339955 | Msa1071590:CDS | 45.0% |
| !!! | AACTTGCTGCTGAGGTTTTG+AGG | + | chr7_2:68340229-68340248 | Msa1071590:CDS | 45.0% |
| CATGTTGCTACAGTCTGACT+CGG | + | chr7_2:68340488-68340507 | Msa1071590:intron | 45.0% | |
| ACTCTCTGTCGATCTTCTGA+AGG | + | chr7_2:68340548-68340567 | Msa1071590:CDS | 45.0% | |
| GCAGTCAACTGAGATTGGAA+AGG | + | chr7_2:68340674-68340693 | Msa1071590:intron | 45.0% | |
| TGAGAGTTCGTGCTAGTTGA+CGG | - | chr7_2:68340737-68340756 | None:intergenic | 45.0% | |
| ! | TTCTAGTGGATGGAAAGAGC+TGG | + | chr7_2:68341092-68341111 | Msa1071590:intron | 45.0% |
| AAGAAAGCCCCTTCATCCAA+AGG | - | chr7_2:68341356-68341375 | None:intergenic | 45.0% | |
| TTCGATGGCATGGATGATGA+TGG | + | chr7_2:68341524-68341543 | Msa1071590:CDS | 45.0% | |
| GAACCGTAACAACGAAAGCT+AGG | - | chr7_2:68341586-68341605 | None:intergenic | 45.0% | |
| CTGTCTTTCTTCCGTTGTCA+CGG | - | chr7_2:68341698-68341717 | None:intergenic | 45.0% | |
| AACGGAAGAAAGACAGCTCT+TGG | + | chr7_2:68341702-68341721 | Msa1071590:CDS | 45.0% | |
| AGCTCTTGGCACTCAAACTA+AGG | + | chr7_2:68341716-68341735 | Msa1071590:CDS | 45.0% | |
| TTGGCACTCAAACTAAGGAG+AGG | + | chr7_2:68341721-68341740 | Msa1071590:CDS | 45.0% | |
| ! | ACGGCTGTTTCATTAGATGC+CGG | - | chr7_2:68341753-68341772 | None:intergenic | 45.0% |
| CATGAAGAAAAACGAGGCTG+TGG | + | chr7_2:68341800-68341819 | Msa1071590:CDS | 45.0% | |
| CATTCAGCGAAAAGCCAATG+TGG | + | chr7_2:68341881-68341900 | Msa1071590:CDS | 45.0% | |
| AGCCGAATCATCTGAACACT+TGG | - | chr7_2:68342059-68342078 | None:intergenic | 45.0% | |
| CTCTTGAAGTCTTCGCTTAG+TGG | - | chr7_2:68342092-68342111 | None:intergenic | 45.0% | |
| TAATTGCAGCCAAGAGGCAA+AGG | + | chr7_2:68342255-68342274 | Msa1071590:intron | 45.0% | |
| ! | CATTGCCGATTGTGATTTCC+GGG | - | chr7_2:68342350-68342369 | None:intergenic | 45.0% |
| ! | CCATTGCCGATTGTGATTTC+CGG | - | chr7_2:68342351-68342370 | None:intergenic | 45.0% |
| CGGAAATCACAATCGGCAAT+GGG | + | chr7_2:68342349-68342368 | Msa1071590:CDS | 45.0% | |
| GGAAATCACAATCGGCAATG+GGG | + | chr7_2:68342350-68342369 | Msa1071590:CDS | 45.0% | |
| TTTCTATGCTCTCAAGGAGG+GGG | - | chr7_2:68342501-68342520 | None:intergenic | 45.0% | |
| GATCCTATCTTGGAGTTCCA+TGG | + | chr7_2:68342670-68342689 | Msa1071590:three_prime_UTR | 45.0% | |
| AAGCCATGGAACTCCAAGAT+AGG | - | chr7_2:68342676-68342695 | None:intergenic | 45.0% | |
| AGTCAGGGTCACTTGATCAG+TGG | + | chr7_2:68339851-68339870 | Msa1071590:CDS | 50.0% | |
| ! | TCGTTGTAAGGGGTGTGAGA+AGG | + | chr7_2:68340014-68340033 | Msa1071590:CDS | 50.0% |
| TGCTAGCAAAGAGAGCAAGG+TGG | + | chr7_2:68340104-68340123 | Msa1071590:CDS | 50.0% | |
| !! | AGAGCAAGGTGGATTGCAGT+AGG | + | chr7_2:68340115-68340134 | Msa1071590:CDS | 50.0% |
| !! | GAGCAAGGTGGATTGCAGTA+GGG | + | chr7_2:68340116-68340135 | Msa1071590:CDS | 50.0% |
| !! | GCAATCACAACTTGCTGCTG+AGG | + | chr7_2:68340221-68340240 | Msa1071590:CDS | 50.0% |
| ! | TGCTGTTTGAGTCTCTGAGG+AGG | + | chr7_2:68340511-68340530 | Msa1071590:CDS | 50.0% |
| GAAAGAGCTGGTCAATGCGT+GGG | + | chr7_2:68341104-68341123 | Msa1071590:CDS | 50.0% | |
| ! | AGCTTCAGAAGAAGGCACAC+CGG | + | chr7_2:68341268-68341287 | Msa1071590:intron | 50.0% |
| CTTCATCCAAAGGAGGTGAC+GGG | - | chr7_2:68341346-68341365 | None:intergenic | 50.0% | |
| CCTTCATCCAAAGGAGGTGA+CGG | - | chr7_2:68341347-68341366 | None:intergenic | 50.0% | |
| CGTCACCTCCTTTGGATGAA+GGG | + | chr7_2:68341345-68341364 | Msa1071590:CDS | 50.0% | |
| GTCACCTCCTTTGGATGAAG+GGG | + | chr7_2:68341346-68341365 | Msa1071590:CDS | 50.0% | |
| AAAGCCCCTTCATCCAAAGG+AGG | - | chr7_2:68341353-68341372 | None:intergenic | 50.0% | |
| GCTTTCTTTGTTGCCCCAAC+TGG | + | chr7_2:68341368-68341387 | Msa1071590:CDS | 50.0% | |
| ! | CTTGTTGTCCTTGGCAGTGA+CGG | - | chr7_2:68341772-68341791 | None:intergenic | 50.0% |
| !! | GTGCTGACTCTTGTTGTCCT+TGG | - | chr7_2:68341781-68341800 | None:intergenic | 50.0% |
| AGAAAAACGAGGCTGTGGTG+AGG | + | chr7_2:68341805-68341824 | Msa1071590:CDS | 50.0% | |
| GGTGAGGCCTAATAAACCGA+TGG | + | chr7_2:68341821-68341840 | Msa1071590:CDS | 50.0% | |
| GAGGCCTAATAAACCGATGG+CGG | + | chr7_2:68341824-68341843 | Msa1071590:CDS | 50.0% | |
| !! | TCAGCCGCCATCGGTTTATT+AGG | - | chr7_2:68341831-68341850 | None:intergenic | 50.0% |
| ! | GCCGAAGATGCCTCTGAAAA+TGG | + | chr7_2:68341905-68341924 | Msa1071590:CDS | 50.0% |
| !! | ACATCTTGCTGGGCATTGAG+AGG | - | chr7_2:68341954-68341973 | None:intergenic | 50.0% |
| CAAAGCAAGGGTCTGTCCAA+CGG | + | chr7_2:68342309-68342328 | Msa1071590:CDS | 50.0% | |
| CCGGAAATCACAATCGGCAA+TGG | + | chr7_2:68342348-68342367 | Msa1071590:CDS | 50.0% | |
| TTCTATGCTCTCAAGGAGGG+GGG | - | chr7_2:68342500-68342519 | None:intergenic | 50.0% | |
| CAGGGTCACTTGATCAGTGG+AGG | + | chr7_2:68339854-68339873 | Msa1071590:CDS | 55.0% | |
| GGGTGCTAGCAAAGAGAGCA+AGG | + | chr7_2:68340101-68340120 | Msa1071590:CDS | 55.0% | |
| !! | CGGTGCTGTTTGAGTCTCTG+AGG | + | chr7_2:68340508-68340527 | Msa1071590:CDS | 55.0% |
| GGAAAGAGCTGGTCAATGCG+TGG | + | chr7_2:68341103-68341122 | Msa1071590:CDS | 55.0% | |
| TCAACAACCACACCTGTCGC+AGG | + | chr7_2:68341135-68341154 | Msa1071590:CDS | 55.0% | |
| AATTCGACCTGCGACAGGTG+TGG | - | chr7_2:68341145-68341164 | None:intergenic | 55.0% | |
| CCGTCACCTCCTTTGGATGA+AGG | + | chr7_2:68341344-68341363 | Msa1071590:CDS | 55.0% | |
| TGAAACAGCCGTCACTGCCA+AGG | + | chr7_2:68341761-68341780 | Msa1071590:CDS | 55.0% | |
| ! | AAACCGATGGCGGCTGATAC+TGG | + | chr7_2:68341834-68341853 | Msa1071590:CDS | 55.0% |
| AGGCATCTTCGGCTCCACAT+TGG | - | chr7_2:68341898-68341917 | None:intergenic | 55.0% | |
| !! | GGGCATTGAGAGGCCTCTTA+GGG | - | chr7_2:68341944-68341963 | None:intergenic | 55.0% |
| !! | TGGGCATTGAGAGGCCTCTT+AGG | - | chr7_2:68341945-68341964 | None:intergenic | 55.0% |
| CGTTGGACAGACCCTTGCTT+TGG | - | chr7_2:68342311-68342330 | None:intergenic | 55.0% | |
| CACAATCGGCAATGGGGCAA+CGG | + | chr7_2:68342356-68342375 | Msa1071590:CDS | 55.0% | |
| GCTGGTCAATGCGTGGGTGA+AGG | + | chr7_2:68341110-68341129 | Msa1071590:CDS | 60.0% | |
| AGGACTCCCGTCACCTCCTT+TGG | + | chr7_2:68341337-68341356 | Msa1071590:CDS | 60.0% | |
| CGACCAGTATCAGCCGCCAT+CGG | - | chr7_2:68341840-68341859 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 68339289 | 68342939 | 68339289 | ID=Msa1071590;Name=Msa1071590 |
| chr7_2 | mRNA | 68339289 | 68342939 | 68339289 | ID=Msa1071590-mRNA-1;Parent=Msa1071590;Name=Msa1071590-mRNA-1;_AED=0.19;_eAED=0.19;_QI=134|1|1|1|0.9|0.90|11|551|446 |
| chr7_2 | exon | 68339289 | 68339380 | 68339289 | ID=Msa1071590-mRNA-1:exon:14937;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68339694 | 68339744 | 68339694 | ID=Msa1071590-mRNA-1:exon:14938;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68339847 | 68340284 | 68339847 | ID=Msa1071590-mRNA-1:exon:14939;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68340501 | 68340569 | 68340501 | ID=Msa1071590-mRNA-1:exon:14940;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68340678 | 68340760 | 68340678 | ID=Msa1071590-mRNA-1:exon:14941;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68341098 | 68341156 | 68341098 | ID=Msa1071590-mRNA-1:exon:14942;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68341270 | 68341409 | 68341270 | ID=Msa1071590-mRNA-1:exon:14943;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68341521 | 68341548 | 68341521 | ID=Msa1071590-mRNA-1:exon:14944;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68341664 | 68341971 | 68341664 | ID=Msa1071590-mRNA-1:exon:14945;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68342052 | 68342133 | 68342052 | ID=Msa1071590-mRNA-1:exon:14946;Parent=Msa1071590-mRNA-1 |
| chr7_2 | exon | 68342264 | 68342939 | 68342264 | ID=Msa1071590-mRNA-1:exon:14947;Parent=Msa1071590-mRNA-1 |
| chr7_2 | five_prime_UTR | 68339289 | 68339380 | 68339289 | ID=Msa1071590-mRNA-1:five_prime_utr;Parent=Msa1071590-mRNA-1 |
| chr7_2 | five_prime_UTR | 68339694 | 68339735 | 68339694 | ID=Msa1071590-mRNA-1:five_prime_utr;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68339736 | 68339744 | 68339736 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68339847 | 68340284 | 68339847 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68340501 | 68340569 | 68340501 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68340678 | 68340760 | 68340678 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68341098 | 68341156 | 68341098 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68341270 | 68341409 | 68341270 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68341521 | 68341548 | 68341521 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68341664 | 68341971 | 68341664 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68342052 | 68342133 | 68342052 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | CDS | 68342264 | 68342388 | 68342264 | ID=Msa1071590-mRNA-1:cds;Parent=Msa1071590-mRNA-1 |
| chr7_2 | three_prime_UTR | 68342389 | 68342939 | 68342389 | ID=Msa1071590-mRNA-1:three_prime_utr;Parent=Msa1071590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
