Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072310 | XP_003624753.1 | 99.640 | 278 | 1 | 0 | 1 | 278 | 1 | 278 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072310 | sp|Q9ZNT1|NB5R1_ARATH | 83.094 | 278 | 46 | 1 | 2 | 278 | 4 | 281 | 1.44e-166 | 465 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072310 | G7L2L3 | 99.640 | 278 | 1 | 0 | 1 | 278 | 1 | 278 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1072310 | Msa1118170 | 0.914270 | 2.334031e-84 | -8.615850e-47 |
| Msa1072310 | Msa1277110 | 0.800384 | 1.477889e-48 | -8.615850e-47 |
| Msa0506750 | Msa1072310 | 0.808788 | 2.607356e-50 | -8.615850e-47 |
| Msa0566290 | Msa1072310 | 0.803446 | 3.472824e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072310 | MtrunA17_Chr7g0254371 | 99.640 | 278 | 1 | 0 | 1 | 278 | 1 | 278 | 0.0 | 575 |
| Msa1072310 | MtrunA17_Chr3g0118791 | 75.627 | 279 | 66 | 2 | 1 | 278 | 1 | 278 | 2.82e-159 | 444 |
| Msa1072310 | MtrunA17_Chr8g0355241 | 64.748 | 278 | 97 | 1 | 1 | 278 | 19 | 295 | 6.27e-137 | 388 |
| Msa1072310 | MtrunA17_Chr4g0063451 | 42.748 | 262 | 129 | 4 | 15 | 257 | 32 | 291 | 1.32e-67 | 213 |
| Msa1072310 | MtrunA17_Chr5g0424491 | 39.695 | 262 | 135 | 5 | 30 | 270 | 616 | 875 | 4.82e-54 | 187 |
| Msa1072310 | MtrunA17_Chr3g0115151 | 38.976 | 254 | 130 | 7 | 39 | 270 | 579 | 829 | 2.39e-49 | 174 |
| Msa1072310 | MtrunA17_Chr3g0115131 | 36.078 | 255 | 139 | 6 | 37 | 270 | 616 | 867 | 8.13e-47 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072310 | AT5G17770.1 | 83.094 | 278 | 46 | 1 | 2 | 278 | 4 | 281 | 1.46e-167 | 465 |
| Msa1072310 | AT5G20080.1 | 41.958 | 286 | 143 | 5 | 14 | 278 | 45 | 328 | 3.04e-69 | 217 |
| Msa1072310 | AT1G37130.1 | 38.868 | 265 | 138 | 7 | 34 | 276 | 652 | 914 | 8.51e-52 | 182 |
| Msa1072310 | AT1G77760.1 | 35.361 | 263 | 146 | 6 | 30 | 270 | 648 | 908 | 1.74e-49 | 175 |
Find 106 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAATGAATGAGAATAAA+AGG | 0.227646 | 7_2:-69342646 | None:intergenic |
| AAGTGAACTTTGCAACATTA+TGG | 0.236380 | 7_2:-69344106 | None:intergenic |
| TGCACCTTGGTCTTGTCATT+TGG | 0.237965 | 7_2:-69345775 | None:intergenic |
| TCCAACACCCACATCTGTTT+TGG | 0.244508 | 7_2:+69344136 | Msa1072310:CDS |
| CCGGGTGAGGTTAGAGCATT+TGG | 0.244629 | 7_2:+69345585 | Msa1072310:CDS |
| TAAAATTTAATGTATTAAAA+TGG | 0.260795 | 7_2:+69342454 | Msa1072310:five_prime_UTR |
| GTGAGGCATTCCCAAGTTTA+AGG | 0.270572 | 7_2:-69347459 | None:intergenic |
| TCCAAAGTTGTAGGAGTATA+TGG | 0.274849 | 7_2:-69344722 | None:intergenic |
| GCACCTTGGTCTTGTCATTT+GGG | 0.281422 | 7_2:-69345774 | None:intergenic |
| GGTGACTATCTGGCTGTTAA+AGG | 0.292217 | 7_2:+69344922 | Msa1072310:CDS |
| GCTTGAACCCAGACCAGTTC+AGG | 0.298728 | 7_2:+69344051 | Msa1072310:CDS |
| AGGTGAAGAGAGTGAGCTAA+TGG | 0.324451 | 7_2:-69342606 | None:intergenic |
| TCCTCCAGCACAAGACATTA+AGG | 0.328295 | 7_2:+69346914 | Msa1072310:CDS |
| AATAAAAGGGAATGCGTATT+GGG | 0.332301 | 7_2:-69342632 | None:intergenic |
| ACCATATACTCCTACAACTT+TGG | 0.338582 | 7_2:+69344721 | Msa1072310:CDS |
| AATATACTATGTGTTGAATC+AGG | 0.353573 | 7_2:+69346178 | Msa1072310:CDS |
| GAGCATATTCGAGGGCTTCC+AGG | 0.357594 | 7_2:-69347098 | None:intergenic |
| TCGATGAGAACAATCAAAAC+TGG | 0.365975 | 7_2:-69347134 | None:intergenic |
| CAAGGCTATGGCTGCTCACC+TGG | 0.376416 | 7_2:+69347080 | Msa1072310:CDS |
| CTATGCCAATGTTACATTTG+AGG | 0.377727 | 7_2:+69345804 | Msa1072310:CDS |
| TTCAAAATCTCCTTAAACTT+GGG | 0.380806 | 7_2:+69347449 | Msa1072310:three_prime_UTR |
| GGTGAAGAGAGTGAGCTAAT+GGG | 0.381978 | 7_2:-69342605 | None:intergenic |
| CAAAACTGGAACTGCATCTC+AGG | 0.384187 | 7_2:-69347120 | None:intergenic |
| TTAAACTCCCTGAACTGGTC+TGG | 0.391406 | 7_2:-69344059 | None:intergenic |
| CAACTTATGTGTTGTCCAAT+TGG | 0.401689 | 7_2:-69344164 | None:intergenic |
| TTGGACAACACATAAGTTGC+AGG | 0.406156 | 7_2:+69344168 | Msa1072310:CDS |
| CCAGAAAATCAAATCCTTGT+TGG | 0.410769 | 7_2:+69342721 | Msa1072310:CDS |
| GATGCGTGTTGGTGACTATC+TGG | 0.412193 | 7_2:+69344912 | Msa1072310:CDS |
| TTTCAAAATCTCCTTAAACT+TGG | 0.417928 | 7_2:+69347448 | Msa1072310:three_prime_UTR |
| CTCTTTAGCCTCCTGAGGTA+TGG | 0.418480 | 7_2:+69346841 | Msa1072310:intron |
| GCAGCCATAGCCTTGTTCAT+TGG | 0.427723 | 7_2:-69347072 | None:intergenic |
| CAAGTTTAAACTCCCTGAAC+TGG | 0.431918 | 7_2:-69344064 | None:intergenic |
| GAATAAAAGGGAATGCGTAT+TGG | 0.444103 | 7_2:-69342633 | None:intergenic |
| ACAACTTTGGATTCTGATGT+TGG | 0.448178 | 7_2:+69344734 | Msa1072310:CDS |
| TAAACTCCCTGAACTGGTCT+GGG | 0.449992 | 7_2:-69344058 | None:intergenic |
| GGGACGTTTCAAGTACCAAC+CGG | 0.453099 | 7_2:+69345566 | Msa1072310:intron |
| GTGAAGAGAGTGAGCTAATG+GGG | 0.459496 | 7_2:-69342604 | None:intergenic |
| AGAAGAGTGGTCACAGTGAA+AGG | 0.467684 | 7_2:-69342571 | None:intergenic |
| ACATCAGAATCCAAAGTTGT+AGG | 0.472524 | 7_2:-69344731 | None:intergenic |
| GGGATGCTAGCAGGAGGCTC+TGG | 0.474366 | 7_2:+69345606 | Msa1072310:CDS |
| GCCATAGCCTTGTTCATTGG+TGG | 0.477893 | 7_2:-69347069 | None:intergenic |
| CTTTGGATTTCTTAGATGAA+AGG | 0.485490 | 7_2:-69342789 | None:intergenic |
| ATAGCCTTGTTCATTGGTGG+TGG | 0.488927 | 7_2:-69347066 | None:intergenic |
| CGGGTGAGGTTAGAGCATTT+GGG | 0.490611 | 7_2:+69345586 | Msa1072310:CDS |
| TCTTTAGCCTCCTGAGGTAT+GGG | 0.492446 | 7_2:+69346842 | Msa1072310:intron |
| TGGAATGAATGAGAATAAAA+GGG | 0.494978 | 7_2:-69342645 | None:intergenic |
| GTTAAGAGTCTGGGAAACAT+TGG | 0.495168 | 7_2:+69347247 | Msa1072310:three_prime_UTR |
| AGAGCATTTGGGATGCTAGC+AGG | 0.496081 | 7_2:+69345597 | Msa1072310:CDS |
| ATCAGTTTCTTGATCAGCTA+AGG | 0.496681 | 7_2:-69347194 | None:intergenic |
| ACCTTAATGTCTTGTGCTGG+AGG | 0.498750 | 7_2:-69346915 | None:intergenic |
| CTTGAACCCAGACCAGTTCA+GGG | 0.504689 | 7_2:+69344052 | Msa1072310:CDS |
| CAACACGCATCTCACGGAAA+TGG | 0.505152 | 7_2:-69344900 | None:intergenic |
| CACAGTGAAAGGGAGGGATC+TGG | 0.509954 | 7_2:-69342560 | None:intergenic |
| GCTGTTGCTGTTGTAGCCAT+TGG | 0.513561 | 7_2:+69342748 | Msa1072310:CDS |
| ATTACCTTAATGTCTTGTGC+TGG | 0.522361 | 7_2:-69346918 | None:intergenic |
| TACTAACATACTTGGAACAT+TGG | 0.522560 | 7_2:-69345636 | None:intergenic |
| ACGCCACCATCCCATACCTC+AGG | 0.524127 | 7_2:-69346852 | None:intergenic |
| GAGGTATGGGATGGTGGCGT+CGG | 0.530909 | 7_2:+69346855 | Msa1072310:CDS |
| CCAAATGCTCTAACCTCACC+CGG | 0.539105 | 7_2:-69345585 | None:intergenic |
| CCCAAAACAGATGTGGGTGT+TGG | 0.540414 | 7_2:-69344137 | None:intergenic |
| AATATCCTCAAATGTAACAT+TGG | 0.543692 | 7_2:-69345809 | None:intergenic |
| GGTGTGACATCCTTCCTTGA+GGG | 0.544961 | 7_2:-69344879 | None:intergenic |
| GAAGAGTGGTCACAGTGAAA+GGG | 0.549203 | 7_2:-69342570 | None:intergenic |
| CCTCCTGAGGTATGGGATGG+TGG | 0.549748 | 7_2:+69346849 | Msa1072310:CDS |
| TAAGGATGGTCAAGGTGATG+AGG | 0.551203 | 7_2:+69344691 | Msa1072310:CDS |
| GCATCTCAGGAGCATATTCG+AGG | 0.552843 | 7_2:-69347107 | None:intergenic |
| TGAAGAGAGTGAGCTAATGG+GGG | 0.555658 | 7_2:-69342603 | None:intergenic |
| TTTCAAGTACCAACCGGGTG+AGG | 0.561094 | 7_2:+69345572 | Msa1072310:CDS |
| GCTGTTGTAGCCATTGGCGT+TGG | 0.566085 | 7_2:+69342754 | Msa1072310:CDS |
| GGATCTGGTGCAACTACCAC+TGG | 0.566292 | 7_2:-69342545 | None:intergenic |
| TGCCAATAGTAAAAGTAGCA+TGG | 0.566780 | 7_2:+69342388 | None:intergenic |
| ATTAGATGTACCCTCAAGGA+AGG | 0.571152 | 7_2:+69344869 | Msa1072310:intron |
| TTAATGTCTTGTGCTGGAGG+AGG | 0.572490 | 7_2:-69346912 | None:intergenic |
| GAGTGGTCACAGTGAAAGGG+AGG | 0.575921 | 7_2:-69342567 | None:intergenic |
| TAGCCTCCTGAGGTATGGGA+TGG | 0.576240 | 7_2:+69346846 | Msa1072310:intron |
| ATAAAAGGGAATGCGTATTG+GGG | 0.578682 | 7_2:-69342631 | None:intergenic |
| CTTTCATCTAAGAAATCCAA+AGG | 0.582100 | 7_2:+69342790 | Msa1072310:CDS |
| TGGAAGACCCAAAACAGATG+TGG | 0.593067 | 7_2:-69344144 | None:intergenic |
| GCTGTGCAGGAAGAACTTGA+TGG | 0.594159 | 7_2:+69346125 | Msa1072310:intron |
| GTAATCTCTTTAGCCTCCTG+AGG | 0.594413 | 7_2:+69346836 | Msa1072310:intron |
| CTCATCGAGGAGCTTCATCA+TGG | 0.598108 | 7_2:+69347149 | Msa1072310:three_prime_UTR |
| TCTGGCTGTTAAAGGACCAA+AGG | 0.603152 | 7_2:+69344930 | Msa1072310:CDS |
| GGCATAGATAAGATGCACCT+TGG | 0.604848 | 7_2:-69345788 | None:intergenic |
| GGAAGACCCAAAACAGATGT+GGG | 0.613896 | 7_2:-69344143 | None:intergenic |
| ATAGATAGCACCAACGCCAA+TGG | 0.614818 | 7_2:-69342764 | None:intergenic |
| ACCACCAATGAACAAGGCTA+TGG | 0.618633 | 7_2:+69347068 | Msa1072310:CDS |
| TTGCTACTAACTATCCAGAT+CGG | 0.619018 | 7_2:+69346150 | Msa1072310:CDS |
| ATGCTCTAACCTCACCCGGT+TGG | 0.626221 | 7_2:-69345581 | None:intergenic |
| TGGGCCACCACCAATGAACA+AGG | 0.628390 | 7_2:+69347062 | Msa1072310:CDS |
| AGTCACCAACACGCATCTCA+CGG | 0.629371 | 7_2:-69344906 | None:intergenic |
| CTTTATTAGATGTACCCTCA+AGG | 0.630114 | 7_2:+69344865 | Msa1072310:intron |
| CATCTCAGGAGCATATTCGA+GGG | 0.630655 | 7_2:-69347106 | None:intergenic |
| GAAGAGAGTGAGCTAATGGG+GGG | 0.632346 | 7_2:-69342602 | None:intergenic |
| TGGTGTGACATCCTTCCTTG+AGG | 0.633272 | 7_2:-69344880 | None:intergenic |
| TTAAACTTGGGAATGCCTCA+CGG | 0.639338 | 7_2:+69347461 | Msa1072310:three_prime_UTR |
| CAGCAACAGCGACACCAACA+AGG | 0.642540 | 7_2:-69342735 | None:intergenic |
| CATTTCCGTGAGATGCGTGT+TGG | 0.644347 | 7_2:+69344901 | Msa1072310:CDS |
| AACAGGGGTAAGGATGGTCA+AGG | 0.645224 | 7_2:+69344683 | Msa1072310:intron |
| ACTCTTAAATCTGTGCATCA+CGG | 0.647938 | 7_2:+69347402 | Msa1072310:three_prime_UTR |
| CCACCATCCCATACCTCAGG+AGG | 0.669756 | 7_2:-69346849 | None:intergenic |
| GGACGTTTCAAGTACCAACC+GGG | 0.676233 | 7_2:+69345567 | Msa1072310:CDS |
| AGTGGTCACAGTGAAAGGGA+GGG | 0.687193 | 7_2:-69342566 | None:intergenic |
| GCATTTGGGATGCTAGCAGG+AGG | 0.697016 | 7_2:+69345600 | Msa1072310:CDS |
| TAAAAGGGAATGCGTATTGG+GGG | 0.698963 | 7_2:-69342630 | None:intergenic |
| TGGGTGAATTGATGAGCCAG+TGG | 0.704413 | 7_2:+69342529 | Msa1072310:five_prime_UTR |
| AAACCCAAATGACAAGACCA+AGG | 0.722764 | 7_2:+69345771 | Msa1072310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATAAATTAAAAAACAAA+GGG | - | chr7_2:69343372-69343391 | None:intergenic | 10.0% |
| !! | AACAATAAATTAAAAAACAA+AGG | - | chr7_2:69343373-69343392 | None:intergenic | 10.0% |
| !!! | GTAAATAATTTTAAGAAATA+AGG | - | chr7_2:69344624-69344643 | None:intergenic | 10.0% |
| !!! | AAATGTTTTTAAGAATATGA+TGG | - | chr7_2:69342427-69342446 | None:intergenic | 15.0% |
| !!! | ATCTTTAATTTGATTTTCAT+TGG | + | chr7_2:69343126-69343145 | Msa1072310:intron | 15.0% |
| !!! | TGATTAATTATATGATTTGT+TGG | + | chr7_2:69343246-69343265 | Msa1072310:intron | 15.0% |
| !!! | ATTTATTGTTAATTGGATTT+TGG | + | chr7_2:69343383-69343402 | Msa1072310:intron | 15.0% |
| !!! | TTTCAAAAATAGTTTTTTCT+TGG | + | chr7_2:69343554-69343573 | Msa1072310:intron | 15.0% |
| !! | CATTATCAAATATTTAGTTA+AGG | - | chr7_2:69343871-69343890 | None:intergenic | 15.0% |
| !!! | TACTTATTTTTCATGTTATT+TGG | + | chr7_2:69343962-69343981 | Msa1072310:intron | 15.0% |
| !!! | TCAAATCTTGAATTATTTTA+AGG | + | chr7_2:69345275-69345294 | Msa1072310:intron | 15.0% |
| !!! | GTACTTTTTTAGTAAAAAAA+AGG | - | chr7_2:69345340-69345359 | None:intergenic | 15.0% |
| !!! | CTAAAAAAGTACATTTTTAT+TGG | + | chr7_2:69345348-69345367 | Msa1072310:intron | 15.0% |
| !!! | GAAATTTTAATGTTATTAAC+AGG | + | chr7_2:69346372-69346391 | Msa1072310:intron | 15.0% |
| !!! | TTTATTAGTGTTATTGTTAT+TGG | + | chr7_2:69346735-69346754 | Msa1072310:intron | 15.0% |
| !!! | ACTTATTTTAGTATAAAAAG+TGG | + | chr7_2:69346788-69346807 | Msa1072310:intron | 15.0% |
| !!! | ATCAATTTTTTCGATAACTT+TGG | - | chr7_2:69342505-69342524 | None:intergenic | 20.0% |
| !! | TATCGAAAAAATTGATGAAT+TGG | + | chr7_2:69342509-69342528 | Msa1072310:five_prime_UTR | 20.0% |
| !! | ATCGAAAAAATTGATGAATT+GGG | + | chr7_2:69342510-69342529 | Msa1072310:five_prime_UTR | 20.0% |
| !!! | TGTTTTATGTCATATAAGTA+TGG | + | chr7_2:69343336-69343355 | Msa1072310:intron | 20.0% |
| !!! | ATTTTTGAAACAGAAAAACA+TGG | - | chr7_2:69343544-69343563 | None:intergenic | 20.0% |
| !!! | AAAATAGTTTTTTCTTGGTT+TGG | + | chr7_2:69343559-69343578 | Msa1072310:intron | 20.0% |
| !! | ACATAATGAAATAATTAGAC+TGG | - | chr7_2:69344226-69344245 | None:intergenic | 20.0% |
| !! | TTAAATTGTTTATCCAAACA+TGG | - | chr7_2:69344350-69344369 | None:intergenic | 20.0% |
| !! | ACAAATAAGCAAGTAATTAA+TGG | - | chr7_2:69344834-69344853 | None:intergenic | 20.0% |
| !! | TTGCTTATTTGTCAAAAATA+TGG | + | chr7_2:69344842-69344861 | Msa1072310:intron | 20.0% |
| !!! | TCTTTTTGTCATTTGATATA+TGG | + | chr7_2:69345251-69345270 | Msa1072310:intron | 20.0% |
| !!! | TAAAAAGTATGTTGAATTGT+GGG | - | chr7_2:69345510-69345529 | None:intergenic | 20.0% |
| !!! | TTAAAAAGTATGTTGAATTG+TGG | - | chr7_2:69345511-69345530 | None:intergenic | 20.0% |
| !!! | AAGTATATTTTCATTAGCAT+TGG | - | chr7_2:69346101-69346120 | None:intergenic | 20.0% |
| !! | TATCAAGAAAACATTGTATA+TGG | - | chr7_2:69346272-69346291 | None:intergenic | 20.0% |
| !!! | AAAAGTCTAATGAAGTATTA+TGG | - | chr7_2:69346399-69346418 | None:intergenic | 20.0% |
| !!! | ATAATACTTCATTAGACTTT+TGG | + | chr7_2:69346398-69346417 | Msa1072310:intron | 20.0% |
| !! | ATCAATTAGTTATCTAATTG+AGG | + | chr7_2:69346687-69346706 | Msa1072310:intron | 20.0% |
| !! | ATAACACTAATAAAAAACAC+AGG | - | chr7_2:69346729-69346748 | None:intergenic | 20.0% |
| !!! | GTTTTTAACCGATAAAAAAA+AGG | + | chr7_2:69347660-69347679 | Msa1072310:three_prime_UTR | 20.0% |
| !!! | GTTTTTAAGAATATGATGGA+GGG | - | chr7_2:69342423-69342442 | None:intergenic | 25.0% |
| !!! | TGTTTTTAAGAATATGATGG+AGG | - | chr7_2:69342424-69342443 | None:intergenic | 25.0% |
| ! | TGGAATGAATGAGAATAAAA+GGG | - | chr7_2:69342648-69342667 | None:intergenic | 25.0% |
| ! | TTGGAATGAATGAGAATAAA+AGG | - | chr7_2:69342649-69342668 | None:intergenic | 25.0% |
| !! | AAAATGGGTTTGTGAAAAAT+GGG | - | chr7_2:69342673-69342692 | None:intergenic | 25.0% |
| !! | AAAAATGGGTTTGTGAAAAA+TGG | - | chr7_2:69342674-69342693 | None:intergenic | 25.0% |
| ! | TCCATGATGATTTGAAAAAT+GGG | - | chr7_2:69342688-69342707 | None:intergenic | 25.0% |
| ! | AAAAATTCAAAGCAGAATCA+AGG | - | chr7_2:69342841-69342860 | None:intergenic | 25.0% |
| !!! | TCTGCTTTGAATTTTTCATA+TGG | + | chr7_2:69342845-69342864 | Msa1072310:intron | 25.0% |
| !!! | CTGCTTTGAATTTTTCATAT+GGG | + | chr7_2:69342846-69342865 | Msa1072310:intron | 25.0% |
| !!! | CTTATTGACTTTTCATTTTC+TGG | + | chr7_2:69342869-69342888 | Msa1072310:intron | 25.0% |
| ! | CAATCAAAAAAAACTACGTT+GGG | - | chr7_2:69342927-69342946 | None:intergenic | 25.0% |
| ! | ACAATCAAAAAAAACTACGT+TGG | - | chr7_2:69342928-69342947 | None:intergenic | 25.0% |
| ! | TAAATTTCTGTTTATGCACT+TGG | + | chr7_2:69343182-69343201 | Msa1072310:intron | 25.0% |
| !! | TTTCGTAGAGATTAGAATTT+TGG | + | chr7_2:69343424-69343443 | Msa1072310:intron | 25.0% |
| ! | GAAACTGAAAAAATTTCAGA+TGG | - | chr7_2:69343452-69343471 | None:intergenic | 25.0% |
| ! | GGTATATTAGCAGATTTATA+TGG | + | chr7_2:69343607-69343626 | Msa1072310:intron | 25.0% |
| !!! | ATTTGTTATAGAGTTCACAA+TGG | + | chr7_2:69343679-69343698 | Msa1072310:intron | 25.0% |
| !!! | ATTTTAGTATTACCAACCAA+TGG | - | chr7_2:69343733-69343752 | None:intergenic | 25.0% |
| ! | TTTCACTTGTGTAAGAAATA+AGG | - | chr7_2:69343840-69343859 | None:intergenic | 25.0% |
| ! | TTTATAGTAGCAAGTATAGT+AGG | + | chr7_2:69344317-69344336 | Msa1072310:intron | 25.0% |
| ! | AACAAGCTTAAAACAACATA+TGG | + | chr7_2:69344512-69344531 | Msa1072310:intron | 25.0% |
| !!! | AACAAGCTATTTTTCAAACA+GGG | + | chr7_2:69344667-69344686 | Msa1072310:intron | 25.0% |
| !! | ACATTTTGAACTAGTTATCA+AGG | + | chr7_2:69344757-69344776 | Msa1072310:CDS | 25.0% |
| !! | TCATAAGTTAGAAAAAGCAT+AGG | - | chr7_2:69344811-69344830 | None:intergenic | 25.0% |
| ! | TGTGTAAAAATAGTTACCTT+TGG | - | chr7_2:69344949-69344968 | None:intergenic | 25.0% |
| !!! | ACTATTTTTACACAGTTTTC+AGG | + | chr7_2:69344955-69344974 | Msa1072310:intron | 25.0% |
| !!! | CTATTTTTACACAGTTTTCA+GGG | + | chr7_2:69344956-69344975 | Msa1072310:intron | 25.0% |
| ! | ACGGTGAAAATTATGAAAAT+GGG | - | chr7_2:69344985-69345004 | None:intergenic | 25.0% |
| ! | ATGACAAAAAGAAAAGTAGT+TGG | - | chr7_2:69345243-69345262 | None:intergenic | 25.0% |
| ! | TAAGATCTGAAAAAATCTTC+TGG | + | chr7_2:69345422-69345441 | Msa1072310:intron | 25.0% |
| ! | ATATGTCTTACTAACATACT+TGG | - | chr7_2:69345647-69345666 | None:intergenic | 25.0% |
| ! | AATATCCTCAAATGTAACAT+TGG | - | chr7_2:69345812-69345831 | None:intergenic | 25.0% |
| !! | ATTTGAGGATATTCTTTTGA+AGG | + | chr7_2:69345819-69345838 | Msa1072310:CDS | 25.0% |
| ! | GAATTTATGAACTTTAGACT+TGG | + | chr7_2:69345886-69345905 | Msa1072310:intron | 25.0% |
| ! | AAAATCTTCTAGCAATTTGA+GGG | - | chr7_2:69345947-69345966 | None:intergenic | 25.0% |
| !!! | TAGTATATTTTAAACCGATC+TGG | - | chr7_2:69346167-69346186 | None:intergenic | 25.0% |
| ! | AATATACTATGTGTTGAATC+AGG | + | chr7_2:69346178-69346197 | Msa1072310:CDS | 25.0% |
| !!! | TAGCTAGATTTTTCAAATCA+AGG | - | chr7_2:69346321-69346340 | None:intergenic | 25.0% |
| ! | TGGAAGAAATTAATAGAACT+TGG | + | chr7_2:69346418-69346437 | Msa1072310:intron | 25.0% |
| ! | CAGATAGCATATTATAAAAG+TGG | - | chr7_2:69346518-69346537 | None:intergenic | 25.0% |
| ! | CTAGCAAATCATATTAATCA+TGG | - | chr7_2:69346563-69346582 | None:intergenic | 25.0% |
| !!! | ATTAATATGATTTGCTAGCT+TGG | + | chr7_2:69346565-69346584 | Msa1072310:intron | 25.0% |
| !!! | TTAATATGATTTGCTAGCTT+GGG | + | chr7_2:69346566-69346585 | Msa1072310:intron | 25.0% |
| ! | AATTAGTTATCTAATTGAGG+AGG | + | chr7_2:69346690-69346709 | Msa1072310:intron | 25.0% |
| !!! | AATACGTAGAAATGTCATTT+TGG | - | chr7_2:69346969-69346988 | None:intergenic | 25.0% |
| !! | AATGACATTTCTACGTATTT+TGG | + | chr7_2:69346970-69346989 | Msa1072310:intron | 25.0% |
| ! | TTGGCTAATTGTAATGTAAT+AGG | + | chr7_2:69346989-69347008 | Msa1072310:intron | 25.0% |
| ! | TGGCTAATTGTAATGTAATA+GGG | + | chr7_2:69346990-69347009 | Msa1072310:intron | 25.0% |
| ! | TCAATATCTGAAAATCGTTA+TGG | - | chr7_2:69347038-69347057 | None:intergenic | 25.0% |
| !! | ATTTTCAGATATTGAGATGT+GGG | + | chr7_2:69347043-69347062 | Msa1072310:intron | 25.0% |
| !!! | TTTTTTTTTGGTTAAGAGTC+TGG | + | chr7_2:69347237-69347256 | Msa1072310:three_prime_UTR | 25.0% |
| !!! | TTTTTTTTGGTTAAGAGTCT+GGG | + | chr7_2:69347238-69347257 | Msa1072310:three_prime_UTR | 25.0% |
| !!! | AAGTTTTGAAACTAAATGCA+TGG | - | chr7_2:69347282-69347301 | None:intergenic | 25.0% |
| ! | TTTCAAAATCTCCTTAAACT+TGG | + | chr7_2:69347448-69347467 | Msa1072310:three_prime_UTR | 25.0% |
| ! | TTCAAAATCTCCTTAAACTT+GGG | + | chr7_2:69347449-69347468 | Msa1072310:three_prime_UTR | 25.0% |
| !! | TCATTTCTCTTTTCTTTAGA+TGG | - | chr7_2:69347537-69347556 | None:intergenic | 25.0% |
| ! | TTTAACCGATAAAAAAAAGG+AGG | + | chr7_2:69347663-69347682 | Msa1072310:three_prime_UTR | 25.0% |
| !!! | GATAACCTCCTTTTTTTTAT+CGG | - | chr7_2:69347671-69347690 | None:intergenic | 25.0% |
| AATAAAAGGGAATGCGTATT+GGG | - | chr7_2:69342635-69342654 | None:intergenic | 30.0% | |
| !! | ACCCATTTTTCAAATCATCA+TGG | + | chr7_2:69342684-69342703 | Msa1072310:exon | 30.0% |
| GTCCATGATGATTTGAAAAA+TGG | - | chr7_2:69342689-69342708 | None:intergenic | 30.0% | |
| CTTTGGATTTCTTAGATGAA+AGG | - | chr7_2:69342792-69342811 | None:intergenic | 30.0% | |
| CTTTCATCTAAGAAATCCAA+AGG | + | chr7_2:69342790-69342809 | Msa1072310:CDS | 30.0% | |
| !!! | GATGTTGATGATGTTTTTTG+AGG | + | chr7_2:69342960-69342979 | Msa1072310:intron | 30.0% |
| TAATGTTATGAAGTTCTGCA+TGG | + | chr7_2:69343078-69343097 | Msa1072310:intron | 30.0% | |
| AAACAGAAATTTAAGCCCAT+GGG | - | chr7_2:69343175-69343194 | None:intergenic | 30.0% | |
| TAAACAGAAATTTAAGCCCA+TGG | - | chr7_2:69343176-69343195 | None:intergenic | 30.0% | |
| !!! | TTTTTCTTGGTTTGGTTTCA+TGG | + | chr7_2:69343567-69343586 | Msa1072310:intron | 30.0% |
| ATTAGCAGATTTATATGGCT+AGG | + | chr7_2:69343612-69343631 | Msa1072310:intron | 30.0% | |
| GATTTATGTTGTACTTCCAT+TGG | + | chr7_2:69343714-69343733 | Msa1072310:intron | 30.0% | |
| CATTATCTTAGGATTCACTT+TGG | - | chr7_2:69343897-69343916 | None:intergenic | 30.0% | |
| GCTTCACTTTACATTATCTT+AGG | - | chr7_2:69343908-69343927 | None:intergenic | 30.0% | |
| AAACACGTAGATGATATGAA+TGG | - | chr7_2:69344023-69344042 | None:intergenic | 30.0% | |
| AAGTGAACTTTGCAACATTA+TGG | - | chr7_2:69344109-69344128 | None:intergenic | 30.0% | |
| ! | TTTTACAACTTAAGCTATCC+TGG | + | chr7_2:69344477-69344496 | Msa1072310:intron | 30.0% |
| ! | TTAAGAAATAAGGGCATGTT+TGG | - | chr7_2:69344614-69344633 | None:intergenic | 30.0% |
| !!! | GAACAAGCTATTTTTCAAAC+AGG | + | chr7_2:69344666-69344685 | Msa1072310:intron | 30.0% |
| !!! | ACAAGCTATTTTTCAAACAG+GGG | + | chr7_2:69344668-69344687 | Msa1072310:intron | 30.0% |
| CACGGTGAAAATTATGAAAA+TGG | - | chr7_2:69344986-69345005 | None:intergenic | 30.0% | |
| ! | CATTTTCATAATTTTCACCG+TGG | + | chr7_2:69344984-69345003 | Msa1072310:intron | 30.0% |
| ATCTCCAATGTGTATCTATT+TGG | + | chr7_2:69345088-69345107 | Msa1072310:intron | 30.0% | |
| ATGTCCAAATAGATACACAT+TGG | - | chr7_2:69345095-69345114 | None:intergenic | 30.0% | |
| TGAGTTCCAATTCATTCTAA+TGG | + | chr7_2:69345164-69345183 | Msa1072310:intron | 30.0% | |
| AGTGATCCATTAGAATGAAT+TGG | - | chr7_2:69345173-69345192 | None:intergenic | 30.0% | |
| ATTAATTGCACTAGTAACGA+TGG | - | chr7_2:69345475-69345494 | None:intergenic | 30.0% | |
| ! | TTTTTGATGTATCTGCTTTC+AGG | + | chr7_2:69345545-69345564 | Msa1072310:intron | 30.0% |
| ! | TTTTGATGTATCTGCTTTCA+GGG | + | chr7_2:69345546-69345565 | Msa1072310:intron | 30.0% |
| TACTAACATACTTGGAACAT+TGG | - | chr7_2:69345639-69345658 | None:intergenic | 30.0% | |
| !! | TGTTTGCTTGTTGTCATTTA+AGG | + | chr7_2:69345729-69345748 | Msa1072310:intron | 30.0% |
| !! | ATGAAGAGTATCATATCAAG+TGG | - | chr7_2:69345862-69345881 | None:intergenic | 30.0% |
| TGGTTTAGATTGATCCATTA+CGG | + | chr7_2:69345906-69345925 | Msa1072310:intron | 30.0% | |
| CAAAATCTTCTAGCAATTTG+AGG | - | chr7_2:69345948-69345967 | None:intergenic | 30.0% | |
| AATATACTTATATGCTGTGC+AGG | + | chr7_2:69346112-69346131 | Msa1072310:intron | 30.0% | |
| !! | TAATATGATTTGCTAGCTTG+GGG | + | chr7_2:69346567-69346586 | Msa1072310:intron | 30.0% |
| ! | TAAGTAGAAATGTGCTTTTC+AGG | - | chr7_2:69346773-69346792 | None:intergenic | 30.0% |
| ! | GATTTTCAGATATTGAGATG+TGG | + | chr7_2:69347042-69347061 | Msa1072310:intron | 30.0% |
| !!! | AGTTTTATTAAATGACCGTG+AGG | - | chr7_2:69347479-69347498 | None:intergenic | 30.0% |
| ATAAAAGGGAATGCGTATTG+GGG | - | chr7_2:69342634-69342653 | None:intergenic | 35.0% | |
| GAATAAAAGGGAATGCGTAT+TGG | - | chr7_2:69342636-69342655 | None:intergenic | 35.0% | |
| !! | CCAACAAGGATTTGATTTTC+TGG | - | chr7_2:69342724-69342743 | None:intergenic | 35.0% |
| CCAGAAAATCAAATCCTTGT+TGG | + | chr7_2:69342721-69342740 | Msa1072310:CDS | 35.0% | |
| ! | AGAATCAAGGAATCTGAAGT+GGG | - | chr7_2:69342828-69342847 | None:intergenic | 35.0% |
| AGTTATGTGATTTGAACCCA+TGG | + | chr7_2:69343156-69343175 | Msa1072310:intron | 35.0% | |
| GTTATGTGATTTGAACCCAT+GGG | + | chr7_2:69343157-69343176 | Msa1072310:intron | 35.0% | |
| !! | GACTTTGCTTTAAGAAAGCT+TGG | + | chr7_2:69343268-69343287 | Msa1072310:intron | 35.0% |
| ! | GAGTTCACAATGGTATTTTG+AGG | + | chr7_2:69343689-69343708 | Msa1072310:intron | 35.0% |
| TATGTTGTACTTCCATTGGT+TGG | + | chr7_2:69343718-69343737 | Msa1072310:intron | 35.0% | |
| ! | ACAATGCAGGTTTTCACTAA+TGG | + | chr7_2:69343812-69343831 | Msa1072310:intron | 35.0% |
| CTTACACAAGTGAAAGTGAA+AGG | + | chr7_2:69343845-69343864 | Msa1072310:intron | 35.0% | |
| CAACTTATGTGTTGTCCAAT+TGG | - | chr7_2:69344167-69344186 | None:intergenic | 35.0% | |
| AGCTATCCTGGAAAGTTTAT+TGG | + | chr7_2:69344489-69344508 | Msa1072310:intron | 35.0% | |
| CTTGTTCCAATAAACTTTCC+AGG | - | chr7_2:69344498-69344517 | None:intergenic | 35.0% | |
| !! | CTATTTTTCAAACAGGGGTA+AGG | + | chr7_2:69344673-69344692 | Msa1072310:intron | 35.0% |
| ACCATATACTCCTACAACTT+TGG | + | chr7_2:69344721-69344740 | Msa1072310:CDS | 35.0% | |
| ! | TCCAAAGTTGTAGGAGTATA+TGG | - | chr7_2:69344725-69344744 | None:intergenic | 35.0% |
| ACATCAGAATCCAAAGTTGT+AGG | - | chr7_2:69344734-69344753 | None:intergenic | 35.0% | |
| ACAACTTTGGATTCTGATGT+TGG | + | chr7_2:69344734-69344753 | Msa1072310:CDS | 35.0% | |
| CTTTATTAGATGTACCCTCA+AGG | + | chr7_2:69344865-69344884 | Msa1072310:intron | 35.0% | |
| GGAACTCATCATAGTGAATT+GGG | - | chr7_2:69345152-69345171 | None:intergenic | 35.0% | |
| TGGAACTCATCATAGTGAAT+TGG | - | chr7_2:69345153-69345172 | None:intergenic | 35.0% | |
| CTATGCCAATGTTACATTTG+AGG | + | chr7_2:69345804-69345823 | Msa1072310:CDS | 35.0% | |
| ! | AGAGTATCATATCAAGTGGA+AGG | - | chr7_2:69345858-69345877 | None:intergenic | 35.0% |
| TTTAGATTGATCCATTACGG+AGG | + | chr7_2:69345909-69345928 | Msa1072310:intron | 35.0% | |
| ACTGAAAAAAACCTCCGTAA+TGG | - | chr7_2:69345923-69345942 | None:intergenic | 35.0% | |
| TTGCATAAGGAAACAAACTC+AGG | - | chr7_2:69346055-69346074 | None:intergenic | 35.0% | |
| ATATTTGTCGGCATTGCATA+AGG | - | chr7_2:69346068-69346087 | None:intergenic | 35.0% | |
| TGCCGACAAATATTTCAAAC+TGG | + | chr7_2:69346075-69346094 | Msa1072310:intron | 35.0% | |
| ! | GGCCAGTTTGAAATATTTGT+CGG | - | chr7_2:69346080-69346099 | None:intergenic | 35.0% |
| TTGCTACTAACTATCCAGAT+CGG | + | chr7_2:69346150-69346169 | Msa1072310:CDS | 35.0% | |
| GATATCAAGACCAACTTAAG+AGG | - | chr7_2:69346600-69346619 | None:intergenic | 35.0% | |
| ATTACCTTAATGTCTTGTGC+TGG | - | chr7_2:69346921-69346940 | None:intergenic | 35.0% | |
| !!! | ACGTAGAAATGTCATTTTGG+AGG | - | chr7_2:69346966-69346985 | None:intergenic | 35.0% |
| TCGATGAGAACAATCAAAAC+TGG | - | chr7_2:69347137-69347156 | None:intergenic | 35.0% | |
| !!! | AGTTTTGATTGTTCTCATCG+AGG | + | chr7_2:69347136-69347155 | Msa1072310:exon | 35.0% |
| ATCAGTTTCTTGATCAGCTA+AGG | - | chr7_2:69347197-69347216 | None:intergenic | 35.0% | |
| !! | ACTATGCATTTTCTAGCACA+TGG | - | chr7_2:69347373-69347392 | None:intergenic | 35.0% |
| ACTCTTAAATCTGTGCATCA+CGG | + | chr7_2:69347402-69347421 | Msa1072310:three_prime_UTR | 35.0% | |
| TAAAAGGGAATGCGTATTGG+GGG | - | chr7_2:69342633-69342652 | None:intergenic | 40.0% | |
| ! | GGGTTTGTGAAAAATGGGTT+TGG | - | chr7_2:69342668-69342687 | None:intergenic | 40.0% |
| TGGGTCAAAGATGAAACCTT+TGG | - | chr7_2:69342809-69342828 | None:intergenic | 40.0% | |
| CAGAATCAAGGAATCTGAAG+TGG | - | chr7_2:69342829-69342848 | None:intergenic | 40.0% | |
| TCTCTACGAAATTCTAGCGA+GGG | - | chr7_2:69343415-69343434 | None:intergenic | 40.0% | |
| ATCTCTACGAAATTCTAGCG+AGG | - | chr7_2:69343416-69343435 | None:intergenic | 40.0% | |
| CTAGAAATCCTTTCTCTGCT+TGG | + | chr7_2:69343482-69343501 | Msa1072310:intron | 40.0% | |
| TCATGGTTTCTACATGTCTC+AGG | + | chr7_2:69343584-69343603 | Msa1072310:intron | 40.0% | |
| CATGGTTTCTACATGTCTCA+GGG | + | chr7_2:69343585-69343604 | Msa1072310:intron | 40.0% | |
| ATGGTTTCTACATGTCTCAG+GGG | + | chr7_2:69343586-69343605 | Msa1072310:intron | 40.0% | |
| ! | CATTTTCCTCTGCACACATA+AGG | + | chr7_2:69343768-69343787 | Msa1072310:intron | 40.0% |
| ACATAAGGTGCATCAGTTCT+TGG | + | chr7_2:69343783-69343802 | Msa1072310:intron | 40.0% | |
| AAGCTCATTGCACTCAAACT+TGG | + | chr7_2:69343924-69343943 | Msa1072310:intron | 40.0% | |
| CAAGTTTAAACTCCCTGAAC+TGG | - | chr7_2:69344067-69344086 | None:intergenic | 40.0% | |
| !! | TCTGTTTTGGGTCTTCCAAT+TGG | + | chr7_2:69344149-69344168 | Msa1072310:CDS | 40.0% |
| TTGGACAACACATAAGTTGC+AGG | + | chr7_2:69344168-69344187 | Msa1072310:CDS | 40.0% | |
| GTAGCAAGTATAGTAGGACT+CGG | + | chr7_2:69344323-69344342 | Msa1072310:intron | 40.0% | |
| ! | TTTTCAAACAGGGGTAAGGA+TGG | + | chr7_2:69344677-69344696 | Msa1072310:intron | 40.0% |
| ATTAGATGTACCCTCAAGGA+AGG | + | chr7_2:69344869-69344888 | Msa1072310:intron | 40.0% | |
| AAACCCAAATGACAAGACCA+AGG | + | chr7_2:69345771-69345790 | Msa1072310:CDS | 40.0% | |
| GTGGTCATGGTCAAGTTAAA+GGG | - | chr7_2:69346450-69346469 | None:intergenic | 40.0% | |
| TGTGGTCATGGTCAAGTTAA+AGG | - | chr7_2:69346451-69346470 | None:intergenic | 40.0% | |
| !!! | GAAATGTGCTTTTCAGGTAC+AGG | - | chr7_2:69346767-69346786 | None:intergenic | 40.0% |
| GTTAAGAGTCTGGGAAACAT+TGG | + | chr7_2:69347247-69347266 | Msa1072310:three_prime_UTR | 40.0% | |
| TTAAACTTGGGAATGCCTCA+CGG | + | chr7_2:69347461-69347480 | Msa1072310:three_prime_UTR | 40.0% | |
| GAAGAGTGGTCACAGTGAAA+GGG | - | chr7_2:69342573-69342592 | None:intergenic | 45.0% | |
| AGAAGAGTGGTCACAGTGAA+AGG | - | chr7_2:69342574-69342593 | None:intergenic | 45.0% | |
| TGAAGAGAGTGAGCTAATGG+GGG | - | chr7_2:69342606-69342625 | None:intergenic | 45.0% | |
| GTGAAGAGAGTGAGCTAATG+GGG | - | chr7_2:69342607-69342626 | None:intergenic | 45.0% | |
| GGTGAAGAGAGTGAGCTAAT+GGG | - | chr7_2:69342608-69342627 | None:intergenic | 45.0% | |
| AGGTGAAGAGAGTGAGCTAA+TGG | - | chr7_2:69342609-69342628 | None:intergenic | 45.0% | |
| ATAGATAGCACCAACGCCAA+TGG | - | chr7_2:69342767-69342786 | None:intergenic | 45.0% | |
| GAAATCCTTTCTCTGCTTGG+TGG | + | chr7_2:69343485-69343504 | Msa1072310:intron | 45.0% | |
| CTAAACCACCAAGCAGAGAA+AGG | - | chr7_2:69343493-69343512 | None:intergenic | 45.0% | |
| ! | CTTTCTCTGCTTGGTGGTTT+AGG | + | chr7_2:69343491-69343510 | Msa1072310:intron | 45.0% |
| GGAATCGAGAGCAACTAGTA+TGG | - | chr7_2:69343523-69343542 | None:intergenic | 45.0% | |
| TTCTTGGCAAACGACAATGC+AGG | + | chr7_2:69343799-69343818 | Msa1072310:intron | 45.0% | |
| ! | TAAACTCCCTGAACTGGTCT+GGG | - | chr7_2:69344061-69344080 | None:intergenic | 45.0% |
| TTAAACTCCCTGAACTGGTC+TGG | - | chr7_2:69344062-69344081 | None:intergenic | 45.0% | |
| ! | TCCAACACCCACATCTGTTT+TGG | + | chr7_2:69344136-69344155 | Msa1072310:CDS | 45.0% |
| ! | CCAACACCCACATCTGTTTT+GGG | + | chr7_2:69344137-69344156 | Msa1072310:CDS | 45.0% |
| GGAAGACCCAAAACAGATGT+GGG | - | chr7_2:69344146-69344165 | None:intergenic | 45.0% | |
| TGGAAGACCCAAAACAGATG+TGG | - | chr7_2:69344147-69344166 | None:intergenic | 45.0% | |
| CAGCAATACGAGAATATGGC+GGG | - | chr7_2:69344266-69344285 | None:intergenic | 45.0% | |
| CCAGCAATACGAGAATATGG+CGG | - | chr7_2:69344267-69344286 | None:intergenic | 45.0% | |
| CAGCCAGCAATACGAGAATA+TGG | - | chr7_2:69344270-69344289 | None:intergenic | 45.0% | |
| TAAGGATGGTCAAGGTGATG+AGG | + | chr7_2:69344691-69344710 | Msa1072310:CDS | 45.0% | |
| GGTGACTATCTGGCTGTTAA+AGG | + | chr7_2:69344922-69344941 | Msa1072310:CDS | 45.0% | |
| TCTGGCTGTTAAAGGACCAA+AGG | + | chr7_2:69344930-69344949 | Msa1072310:CDS | 45.0% | |
| GATAACCATGCTTGCAACCA+CGG | - | chr7_2:69345004-69345023 | None:intergenic | 45.0% | |
| TTGAATTGTGGGTCGCTGTT+GGG | - | chr7_2:69345499-69345518 | None:intergenic | 45.0% | |
| !! | GCACCTTGGTCTTGTCATTT+GGG | - | chr7_2:69345777-69345796 | None:intergenic | 45.0% |
| !! | TGCACCTTGGTCTTGTCATT+TGG | - | chr7_2:69345778-69345797 | None:intergenic | 45.0% |
| GGCATAGATAAGATGCACCT+TGG | - | chr7_2:69345791-69345810 | None:intergenic | 45.0% | |
| ATGGTCAAGTTAAAGGGTCG+CGG | - | chr7_2:69346444-69346463 | None:intergenic | 45.0% | |
| TTGACCATGACCACAAAGCT+AGG | + | chr7_2:69346456-69346475 | Msa1072310:intron | 45.0% | |
| !! | AAGACCTAGCTTTGTGGTCA+TGG | - | chr7_2:69346463-69346482 | None:intergenic | 45.0% |
| GGGCATATCACCTCTTAAGT+TGG | + | chr7_2:69346587-69346606 | Msa1072310:intron | 45.0% | |
| GTAATCTCTTTAGCCTCCTG+AGG | + | chr7_2:69346836-69346855 | Msa1072310:intron | 45.0% | |
| TCTTTAGCCTCCTGAGGTAT+GGG | + | chr7_2:69346842-69346861 | Msa1072310:intron | 45.0% | |
| TTAATGTCTTGTGCTGGAGG+AGG | - | chr7_2:69346915-69346934 | None:intergenic | 45.0% | |
| TCCTCCAGCACAAGACATTA+AGG | + | chr7_2:69346914-69346933 | Msa1072310:CDS | 45.0% | |
| ACCTTAATGTCTTGTGCTGG+AGG | - | chr7_2:69346918-69346937 | None:intergenic | 45.0% | |
| !! | ATAGCCTTGTTCATTGGTGG+TGG | - | chr7_2:69347069-69347088 | None:intergenic | 45.0% |
| ACCACCAATGAACAAGGCTA+TGG | + | chr7_2:69347068-69347087 | Msa1072310:CDS | 45.0% | |
| ! | CATCTCAGGAGCATATTCGA+GGG | - | chr7_2:69347109-69347128 | None:intergenic | 45.0% |
| CAAAACTGGAACTGCATCTC+AGG | - | chr7_2:69347123-69347142 | None:intergenic | 45.0% | |
| ! | GTGAGGCATTCCCAAGTTTA+AGG | - | chr7_2:69347462-69347481 | None:intergenic | 45.0% |
| !! | TAAAATTTAATGTATTAAAA+TGG | + | chr7_2:69342454-69342473 | Msa1072310:five_prime_UTR | 5.0% |
| !!! | TTTTTTAATTTATTGTTAAT+TGG | + | chr7_2:69343376-69343395 | Msa1072310:intron | 5.0% |
| !! | TTATAATAGAAATTAATAAT+TGG | - | chr7_2:69343644-69343663 | None:intergenic | 5.0% |
| !! | TTATTAATTTCTATTATAAA+TGG | + | chr7_2:69343645-69343664 | Msa1072310:intron | 5.0% |
| !!! | TAAATAATTTTAAGAAATAA+GGG | - | chr7_2:69344623-69344642 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAAACTTTTTTTT+TGG | + | chr7_2:69347225-69347244 | Msa1072310:three_prime_UTR | 5.0% |
| TGGGTGAATTGATGAGCCAG+TGG | + | chr7_2:69342529-69342548 | Msa1072310:five_prime_UTR | 50.0% | |
| AGTGGTCACAGTGAAAGGGA+GGG | - | chr7_2:69342569-69342588 | None:intergenic | 50.0% | |
| !! | GGGGGTGTTTAGAAGAAGAG+TGG | - | chr7_2:69342587-69342606 | None:intergenic | 50.0% |
| GAAGAGAGTGAGCTAATGGG+GGG | - | chr7_2:69342605-69342624 | None:intergenic | 50.0% | |
| ! | GCTGTTGCTGTTGTAGCCAT+TGG | + | chr7_2:69342748-69342767 | Msa1072310:CDS | 50.0% |
| GATGCACCTTATGTGTGCAG+AGG | - | chr7_2:69343777-69343796 | None:intergenic | 50.0% | |
| CTTGAACCCAGACCAGTTCA+GGG | + | chr7_2:69344052-69344071 | Msa1072310:CDS | 50.0% | |
| CCCAAAACAGATGTGGGTGT+TGG | - | chr7_2:69344140-69344159 | None:intergenic | 50.0% | |
| CCGCCATATTCTCGTATTGC+TGG | + | chr7_2:69344264-69344283 | Msa1072310:intron | 50.0% | |
| AGTAGGACTCGGACCATGTT+TGG | + | chr7_2:69344334-69344353 | Msa1072310:intron | 50.0% | |
| AACAGGGGTAAGGATGGTCA+AGG | + | chr7_2:69344683-69344702 | Msa1072310:intron | 50.0% | |
| GGTGTGACATCCTTCCTTGA+GGG | - | chr7_2:69344882-69344901 | None:intergenic | 50.0% | |
| TGGTGTGACATCCTTCCTTG+AGG | - | chr7_2:69344883-69344902 | None:intergenic | 50.0% | |
| CAACACGCATCTCACGGAAA+TGG | - | chr7_2:69344903-69344922 | None:intergenic | 50.0% | |
| CATTTCCGTGAGATGCGTGT+TGG | + | chr7_2:69344901-69344920 | Msa1072310:CDS | 50.0% | |
| AGTCACCAACACGCATCTCA+CGG | - | chr7_2:69344909-69344928 | None:intergenic | 50.0% | |
| !! | GATGCGTGTTGGTGACTATC+TGG | + | chr7_2:69344912-69344931 | Msa1072310:CDS | 50.0% |
| TTTCACCGTGGTTGCAAGCA+TGG | + | chr7_2:69344996-69345015 | Msa1072310:intron | 50.0% | |
| GTTGAATTGTGGGTCGCTGT+TGG | - | chr7_2:69345500-69345519 | None:intergenic | 50.0% | |
| ! | GGGACGTTTCAAGTACCAAC+CGG | + | chr7_2:69345566-69345585 | Msa1072310:intron | 50.0% |
| ! | GGACGTTTCAAGTACCAACC+GGG | + | chr7_2:69345567-69345586 | Msa1072310:CDS | 50.0% |
| ! | TTTCAAGTACCAACCGGGTG+AGG | + | chr7_2:69345572-69345591 | Msa1072310:CDS | 50.0% |
| CCAAATGCTCTAACCTCACC+CGG | - | chr7_2:69345588-69345607 | None:intergenic | 50.0% | |
| ! | CGGGTGAGGTTAGAGCATTT+GGG | + | chr7_2:69345586-69345605 | Msa1072310:CDS | 50.0% |
| ! | AGAGCATTTGGGATGCTAGC+AGG | + | chr7_2:69345597-69345616 | Msa1072310:CDS | 50.0% |
| GCTGTGCAGGAAGAACTTGA+TGG | + | chr7_2:69346125-69346144 | Msa1072310:intron | 50.0% | |
| CTCTTTAGCCTCCTGAGGTA+TGG | + | chr7_2:69346841-69346860 | Msa1072310:intron | 50.0% | |
| !! | GCCATAGCCTTGTTCATTGG+TGG | - | chr7_2:69347072-69347091 | None:intergenic | 50.0% |
| !! | GCAGCCATAGCCTTGTTCAT+TGG | - | chr7_2:69347075-69347094 | None:intergenic | 50.0% |
| ! | GCATCTCAGGAGCATATTCG+AGG | - | chr7_2:69347110-69347129 | None:intergenic | 50.0% |
| CTCATCGAGGAGCTTCATCA+TGG | + | chr7_2:69347149-69347168 | Msa1072310:three_prime_UTR | 50.0% | |
| GGATCTGGTGCAACTACCAC+TGG | - | chr7_2:69342548-69342567 | None:intergenic | 55.0% | |
| CACAGTGAAAGGGAGGGATC+TGG | - | chr7_2:69342563-69342582 | None:intergenic | 55.0% | |
| GAGTGGTCACAGTGAAAGGG+AGG | - | chr7_2:69342570-69342589 | None:intergenic | 55.0% | |
| AGGGAATGCGTATTGGGGGT+AGG | - | chr7_2:69342629-69342648 | None:intergenic | 55.0% | |
| CAGCAACAGCGACACCAACA+AGG | - | chr7_2:69342738-69342757 | None:intergenic | 55.0% | |
| GCTGTTGTAGCCATTGGCGT+TGG | + | chr7_2:69342754-69342773 | Msa1072310:CDS | 55.0% | |
| GCTTGAACCCAGACCAGTTC+AGG | + | chr7_2:69344051-69344070 | Msa1072310:CDS | 55.0% | |
| ATGCTCTAACCTCACCCGGT+TGG | - | chr7_2:69345584-69345603 | None:intergenic | 55.0% | |
| ! | CCGGGTGAGGTTAGAGCATT+TGG | + | chr7_2:69345585-69345604 | Msa1072310:CDS | 55.0% |
| ! | GCATTTGGGATGCTAGCAGG+AGG | + | chr7_2:69345600-69345619 | Msa1072310:CDS | 55.0% |
| !! | GCGTCGAAGACCTAGCTTTG+TGG | - | chr7_2:69346469-69346488 | None:intergenic | 55.0% |
| TAGCCTCCTGAGGTATGGGA+TGG | + | chr7_2:69346846-69346865 | Msa1072310:intron | 55.0% | |
| TGGGCCACCACCAATGAACA+AGG | + | chr7_2:69347062-69347081 | Msa1072310:CDS | 55.0% | |
| GAGCATATTCGAGGGCTTCC+AGG | - | chr7_2:69347101-69347120 | None:intergenic | 55.0% | |
| CCACCATCCCATACCTCAGG+AGG | - | chr7_2:69346852-69346871 | None:intergenic | 60.0% | |
| CCTCCTGAGGTATGGGATGG+TGG | + | chr7_2:69346849-69346868 | Msa1072310:CDS | 60.0% | |
| ACGCCACCATCCCATACCTC+AGG | - | chr7_2:69346855-69346874 | None:intergenic | 60.0% | |
| ! | GAGGTATGGGATGGTGGCGT+CGG | + | chr7_2:69346855-69346874 | Msa1072310:CDS | 60.0% |
| CAAGGCTATGGCTGCTCACC+TGG | + | chr7_2:69347080-69347099 | Msa1072310:CDS | 60.0% | |
| GGGATGCTAGCAGGAGGCTC+TGG | + | chr7_2:69345606-69345625 | Msa1072310:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 69342391 | 69347790 | 69342391 | ID=Msa1072310;Name=Msa1072310 |
| chr7_2 | mRNA | 69342391 | 69347790 | 69342391 | ID=Msa1072310-mRNA-1;Parent=Msa1072310;Name=Msa1072310-mRNA-1;_AED=0.04;_eAED=0.04;_QI=312|1|1|1|1|1|9|647|278 |
| chr7_2 | exon | 69342391 | 69342811 | 69342391 | ID=Msa1072310-mRNA-1:exon:15371;Parent=Msa1072310-mRNA-1 |
| chr7_2 | exon | 69344048 | 69344189 | 69344048 | ID=Msa1072310-mRNA-1:exon:15372;Parent=Msa1072310-mRNA-1 |
| chr7_2 | exon | 69344688 | 69344778 | 69344688 | ID=Msa1072310-mRNA-1:exon:15373;Parent=Msa1072310-mRNA-1 |
| chr7_2 | exon | 69344874 | 69344951 | 69344874 | ID=Msa1072310-mRNA-1:exon:15374;Parent=Msa1072310-mRNA-1 |
| chr7_2 | exon | 69345567 | 69345647 | 69345567 | ID=Msa1072310-mRNA-1:exon:15375;Parent=Msa1072310-mRNA-1 |
| chr7_2 | exon | 69345751 | 69345840 | 69345751 | ID=Msa1072310-mRNA-1:exon:15376;Parent=Msa1072310-mRNA-1 |
| chr7_2 | exon | 69346134 | 69346199 | 69346134 | ID=Msa1072310-mRNA-1:exon:15377;Parent=Msa1072310-mRNA-1 |
| chr7_2 | exon | 69346849 | 69346935 | 69346849 | ID=Msa1072310-mRNA-1:exon:15378;Parent=Msa1072310-mRNA-1 |
| chr7_2 | exon | 69347051 | 69347790 | 69347051 | ID=Msa1072310-mRNA-1:exon:15379;Parent=Msa1072310-mRNA-1 |
| chr7_2 | five_prime_UTR | 69342391 | 69342702 | 69342391 | ID=Msa1072310-mRNA-1:five_prime_utr;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69342703 | 69342811 | 69342703 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69344048 | 69344189 | 69344048 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69344688 | 69344778 | 69344688 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69344874 | 69344951 | 69344874 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69345567 | 69345647 | 69345567 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69345751 | 69345840 | 69345751 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69346134 | 69346199 | 69346134 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69346849 | 69346935 | 69346849 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | CDS | 69347051 | 69347143 | 69347051 | ID=Msa1072310-mRNA-1:cds;Parent=Msa1072310-mRNA-1 |
| chr7_2 | three_prime_UTR | 69347144 | 69347790 | 69347144 | ID=Msa1072310-mRNA-1:three_prime_utr;Parent=Msa1072310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
