Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118170 | XP_003624753.1 | 94.198 | 293 | 2 | 1 | 1 | 293 | 1 | 278 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118170 | sp|Q9ZNT1|NB5R1_ARATH | 78.425 | 292 | 49 | 1 | 2 | 293 | 4 | 281 | 2.28e-163 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118170 | G7L2L3 | 94.198 | 293 | 2 | 1 | 1 | 293 | 1 | 278 | 0.0 | 562 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0630440 | Msa1118170 | 0.811234 | 7.752943e-51 | -8.615850e-47 |
| Msa0658120 | Msa1118170 | 0.807425 | 5.087620e-50 | -8.615850e-47 |
| Msa0661480 | Msa1118170 | 0.806216 | 9.160661e-50 | -8.615850e-47 |
| Msa0689830 | Msa1118170 | 0.826333 | 2.873124e-54 | -8.615850e-47 |
| Msa0732970 | Msa1118170 | 0.807328 | 5.332775e-50 | -8.615850e-47 |
| Msa0773960 | Msa1118170 | 0.808580 | 2.888041e-50 | -8.615850e-47 |
| Msa0195230 | Msa1118170 | 0.802952 | 4.394944e-49 | -8.615850e-47 |
| Msa0379480 | Msa1118170 | 0.810868 | 9.304447e-51 | -8.615850e-47 |
| Msa1072310 | Msa1118170 | 0.914270 | 2.334031e-84 | -8.615850e-47 |
| Msa0276850 | Msa1118170 | 0.818404 | 1.995280e-52 | -8.615850e-47 |
| Msa0279000 | Msa1118170 | 0.804310 | 2.296743e-49 | -8.615850e-47 |
| Msa1118170 | Msa1124210 | 0.820343 | 7.210901e-53 | -8.615850e-47 |
| Msa1118170 | Msa1395050 | 0.807708 | 4.429259e-50 | -8.615850e-47 |
| Msa0506750 | Msa1118170 | 0.836747 | 7.807887e-57 | -8.615850e-47 |
| Msa0549900 | Msa1118170 | 0.807545 | 4.797384e-50 | -8.615850e-47 |
| Msa0566460 | Msa1118170 | 0.802178 | 6.345442e-49 | -8.615850e-47 |
| Msa0900830 | Msa1118170 | 0.800969 | 1.123016e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118170 | MtrunA17_Chr7g0254371 | 94.198 | 293 | 2 | 1 | 1 | 293 | 1 | 278 | 0.0 | 562 |
| Msa1118170 | MtrunA17_Chr3g0118791 | 71.769 | 294 | 66 | 3 | 1 | 293 | 1 | 278 | 2.25e-155 | 434 |
| Msa1118170 | MtrunA17_Chr8g0355241 | 61.775 | 293 | 96 | 2 | 1 | 293 | 19 | 295 | 1.84e-133 | 380 |
| Msa1118170 | MtrunA17_Chr4g0063451 | 43.346 | 263 | 141 | 4 | 15 | 272 | 32 | 291 | 1.05e-67 | 213 |
| Msa1118170 | MtrunA17_Chr5g0424491 | 39.405 | 269 | 138 | 7 | 38 | 285 | 611 | 875 | 5.81e-54 | 188 |
| Msa1118170 | MtrunA17_Chr3g0115151 | 38.976 | 254 | 130 | 7 | 54 | 285 | 579 | 829 | 4.14e-49 | 174 |
| Msa1118170 | MtrunA17_Chr3g0115131 | 36.328 | 256 | 139 | 6 | 51 | 285 | 615 | 867 | 3.57e-47 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118170 | AT5G17770.1 | 78.425 | 292 | 49 | 1 | 2 | 293 | 4 | 281 | 2.32e-164 | 457 |
| Msa1118170 | AT5G20080.1 | 43.846 | 260 | 126 | 4 | 52 | 293 | 71 | 328 | 7.04e-68 | 214 |
| Msa1118170 | AT1G37130.1 | 39.163 | 263 | 136 | 7 | 51 | 291 | 654 | 914 | 6.85e-52 | 182 |
| Msa1118170 | AT1G77760.1 | 35.798 | 257 | 141 | 7 | 51 | 285 | 654 | 908 | 7.54e-49 | 174 |
Find 103 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAATGAATGAGAATAAA+AGG | 0.227646 | 7_3:+66762090 | None:intergenic |
| AAGTGAACTTTGCAACATTA+TGG | 0.236380 | 7_3:+66760659 | None:intergenic |
| TGCACCTTGGTCTTGTCATT+TGG | 0.237965 | 7_3:+66758989 | None:intergenic |
| TCCAACACCCACATCTGTTT+TGG | 0.244508 | 7_3:-66760629 | Msa1118170:CDS |
| CCGGGTGAGGTTAGAGCATT+TGG | 0.244629 | 7_3:-66759179 | Msa1118170:CDS |
| GTGAGGCATTCCCAAGTTTA+AGG | 0.270572 | 7_3:+66757307 | None:intergenic |
| TCCAAAGTTGTAGGAGTATA+TGG | 0.274849 | 7_3:+66760043 | None:intergenic |
| GCACCTTGGTCTTGTCATTT+GGG | 0.281422 | 7_3:+66758990 | None:intergenic |
| GGTGACTATCTGGCTGTTAA+AGG | 0.292217 | 7_3:-66759843 | Msa1118170:CDS |
| GCTTGAACCCAGACCAGTTC+AGG | 0.298728 | 7_3:-66760714 | Msa1118170:CDS |
| TCCTCCAGCACAAGACATTA+AGG | 0.328295 | 7_3:-66757849 | Msa1118170:intron |
| ACCATATACTCCTACAACTT+TGG | 0.338582 | 7_3:-66760044 | Msa1118170:CDS |
| AATATACTATGTGTTGAATC+AGG | 0.353573 | 7_3:-66758585 | Msa1118170:intron |
| GAGCATATTCGAGGGCTTCC+AGG | 0.357594 | 7_3:+66757665 | None:intergenic |
| AGGTGAAGAGAGTGAGCTAA+TGG | 0.362571 | 7_3:+66762130 | None:intergenic |
| TCGATGAGAACAATCAAAAC+TGG | 0.365975 | 7_3:+66757629 | None:intergenic |
| CAAGGCTATGGCTGCTCACC+TGG | 0.376416 | 7_3:-66757683 | Msa1118170:CDS |
| CTATGCCAATGTTACATTTG+AGG | 0.377727 | 7_3:-66758960 | Msa1118170:CDS |
| TTCAAAATCTCCTTAAACTT+GGG | 0.380806 | 7_3:-66757317 | Msa1118170:three_prime_UTR |
| CAAAACTGGAACTGCATCTC+AGG | 0.384187 | 7_3:+66757643 | None:intergenic |
| TTAAACTCCCTGAACTGGTC+TGG | 0.391406 | 7_3:+66760706 | None:intergenic |
| CAACTTATGTGTTGTCCAAT+TGG | 0.401689 | 7_3:+66760601 | None:intergenic |
| TTGGACAACACATAAGTTGC+AGG | 0.406156 | 7_3:-66760597 | Msa1118170:intron |
| GATGCGTGTTGGTGACTATC+TGG | 0.412193 | 7_3:-66759853 | Msa1118170:CDS |
| TTTCAAAATCTCCTTAAACT+TGG | 0.417928 | 7_3:-66757318 | Msa1118170:three_prime_UTR |
| CTCTTTAGCCTCCTGAGGTA+TGG | 0.418480 | 7_3:-66757922 | Msa1118170:intron |
| TCAGAAAATCAAATACTTGT+TGG | 0.426541 | 7_3:-66762018 | Msa1118170:CDS |
| GCAGCCATAGCCTTGTTCAT+TGG | 0.427723 | 7_3:+66757691 | None:intergenic |
| CAAGTTTAAACTCCCTGAAC+TGG | 0.431918 | 7_3:+66760701 | None:intergenic |
| GAATAAAAGGGAATGGGTAT+TGG | 0.435300 | 7_3:+66762103 | None:intergenic |
| ACAACTTTGGATTCTGATGT+TGG | 0.448178 | 7_3:-66760031 | Msa1118170:CDS |
| TAAACTCCCTGAACTGGTCT+GGG | 0.449992 | 7_3:+66760707 | None:intergenic |
| GGGACGTTTCAAGTACCAAC+CGG | 0.453099 | 7_3:-66759198 | Msa1118170:CDS |
| AGAAGAGTGGTCACAGTGAA+AGG | 0.467684 | 7_3:+66762165 | None:intergenic |
| ACATCAGAATCCAAAGTTGT+AGG | 0.472524 | 7_3:+66760034 | None:intergenic |
| GGGATGCTAGCAGGAGGCTC+TGG | 0.474366 | 7_3:-66759158 | Msa1118170:CDS |
| GCCATAGCCTTGTTCATTGG+TGG | 0.477893 | 7_3:+66757694 | None:intergenic |
| GCCGTTGCTGTTGTAGCCAT+TGG | 0.487544 | 7_3:-66761991 | Msa1118170:CDS |
| ATAGCCTTGTTCATTGGTGG+TGG | 0.488927 | 7_3:+66757697 | None:intergenic |
| CGGGTGAGGTTAGAGCATTT+GGG | 0.490611 | 7_3:-66759178 | Msa1118170:CDS |
| TCTTTAGCCTCCTGAGGTAT+GGG | 0.492446 | 7_3:-66757921 | Msa1118170:intron |
| TGGAATGAATGAGAATAAAA+GGG | 0.494978 | 7_3:+66762091 | None:intergenic |
| GTTAAGAGTCTGGGAAACAT+TGG | 0.495168 | 7_3:-66757516 | Msa1118170:three_prime_UTR |
| AGAGCATTTGGGATGCTAGC+AGG | 0.496081 | 7_3:-66759167 | Msa1118170:CDS |
| ATCAGTTTCTTGATCAGCTA+AGG | 0.496681 | 7_3:+66757569 | None:intergenic |
| ACCTTAATGTCTTGTGCTGG+AGG | 0.498750 | 7_3:+66757848 | None:intergenic |
| GAATGAGAATAAAAGGGAAT+GGG | 0.500496 | 7_3:+66762097 | None:intergenic |
| CTTTGGACTTCTTAGATGAA+AGG | 0.501925 | 7_3:+66761950 | None:intergenic |
| TGAATGAGAATAAAAGGGAA+TGG | 0.504035 | 7_3:+66762096 | None:intergenic |
| CTTGAACCCAGACCAGTTCA+GGG | 0.504689 | 7_3:-66760713 | Msa1118170:CDS |
| TGGTCACAGTGAAAGGGATC+TGG | 0.504840 | 7_3:+66762172 | None:intergenic |
| CAACACGCATCTCACGGAAA+TGG | 0.505152 | 7_3:+66759865 | None:intergenic |
| TGAAGAGAGTGAGCTAATGG+AGG | 0.508074 | 7_3:+66762133 | None:intergenic |
| ATTACCTTAATGTCTTGTGC+TGG | 0.522361 | 7_3:+66757845 | None:intergenic |
| TACTAACATACTTGGAACAT+TGG | 0.522560 | 7_3:+66759128 | None:intergenic |
| ACGCCACCATCCCATACCTC+AGG | 0.524127 | 7_3:+66757911 | None:intergenic |
| GAGGTATGGGATGGTGGCGT+CGG | 0.530909 | 7_3:-66757908 | Msa1118170:CDS |
| TAAAAGGGAATGGGTATTGG+AGG | 0.537944 | 7_3:+66762106 | None:intergenic |
| AGGGAATGGGTATTGGAGGT+AGG | 0.538739 | 7_3:+66762110 | None:intergenic |
| CCAAATGCTCTAACCTCACC+CGG | 0.539105 | 7_3:+66759179 | None:intergenic |
| CCCAAAACAGATGTGGGTGT+TGG | 0.540414 | 7_3:+66760628 | None:intergenic |
| AATATCCTCAAATGTAACAT+TGG | 0.543692 | 7_3:+66758955 | None:intergenic |
| GGTGTGACATCCTTCCTTGA+GGG | 0.544961 | 7_3:+66759886 | None:intergenic |
| GAAGAGTGGTCACAGTGAAA+GGG | 0.549203 | 7_3:+66762166 | None:intergenic |
| CCTCCTGAGGTATGGGATGG+TGG | 0.549748 | 7_3:-66757914 | Msa1118170:CDS |
| TAAGGATGGTCAAGGTGATG+AGG | 0.551203 | 7_3:-66760074 | Msa1118170:CDS |
| GAAGAGAGTGAGCTAATGGA+GGG | 0.552409 | 7_3:+66762134 | None:intergenic |
| GCATCTCAGGAGCATATTCG+AGG | 0.552843 | 7_3:+66757656 | None:intergenic |
| GGATCTGGTGCAACTACCAC+TGG | 0.556294 | 7_3:+66762187 | None:intergenic |
| AAACACGTAGATGATATGAA+TGG | 0.556585 | 7_3:+66760745 | None:intergenic |
| GCTGTTGTAGCCATTGGTGT+TGG | 0.557042 | 7_3:-66761985 | Msa1118170:CDS |
| TTTCAAGTACCAACCGGGTG+AGG | 0.561094 | 7_3:-66759192 | Msa1118170:CDS |
| TTAATGTCTTGTGCTGGAGG+AGG | 0.572490 | 7_3:+66757851 | None:intergenic |
| TAGCCTCCTGAGGTATGGGA+TGG | 0.576240 | 7_3:-66757917 | Msa1118170:CDS |
| CTTTCATCTAAGAAGTCCAA+AGG | 0.576412 | 7_3:-66761949 | Msa1118170:intron |
| GAGGGTGTTTAGAAGAAGAG+TGG | 0.586926 | 7_3:+66762152 | None:intergenic |
| TGGAAGACCCAAAACAGATG+TGG | 0.593067 | 7_3:+66760621 | None:intergenic |
| GCTGTGCAGGAAGAACTTGA+TGG | 0.594159 | 7_3:-66758638 | Msa1118170:intron |
| GTAATCTCTTTAGCCTCCTG+AGG | 0.594413 | 7_3:-66757927 | Msa1118170:intron |
| CTCATCGAGGAGCTTCATCA+TGG | 0.598108 | 7_3:-66757614 | Msa1118170:three_prime_UTR |
| ATTAGATGTACCCTCAAGGA+AGG | 0.599275 | 7_3:-66759896 | Msa1118170:intron |
| TCTGGCTGTTAAAGGACCAA+AGG | 0.603152 | 7_3:-66759835 | Msa1118170:intron |
| GGCATAGATAAGATGCACCT+TGG | 0.604848 | 7_3:+66758976 | None:intergenic |
| GGAAGACCCAAAACAGATGT+GGG | 0.613896 | 7_3:+66760622 | None:intergenic |
| ACCAATGGCTACAACAGCAA+CGG | 0.616856 | 7_3:+66761990 | None:intergenic |
| ACCACCAATGAACAAGGCTA+TGG | 0.618633 | 7_3:-66757695 | Msa1118170:CDS |
| TTGCTACTAACTATCCAGAT+CGG | 0.619018 | 7_3:-66758613 | Msa1118170:CDS |
| ATGCTCTAACCTCACCCGGT+TGG | 0.626221 | 7_3:+66759183 | None:intergenic |
| CTTGATTAGATGTACCCTCA+AGG | 0.627526 | 7_3:-66759900 | Msa1118170:intron |
| TGGGCCACCACCAATGAACA+AGG | 0.628390 | 7_3:-66757701 | Msa1118170:CDS |
| AGTCACCAACACGCATCTCA+CGG | 0.629371 | 7_3:+66759859 | None:intergenic |
| CATCTCAGGAGCATATTCGA+GGG | 0.630655 | 7_3:+66757657 | None:intergenic |
| ATAGATAGCACCAACACCAA+TGG | 0.631257 | 7_3:+66761975 | None:intergenic |
| TGGTGTGACATCCTTCCTTG+AGG | 0.633272 | 7_3:+66759885 | None:intergenic |
| TTAAACTTGGGAATGCCTCA+CGG | 0.639338 | 7_3:-66757305 | Msa1118170:three_prime_UTR |
| CATTTCCGTGAGATGCGTGT+TGG | 0.644347 | 7_3:-66759864 | Msa1118170:CDS |
| AACAGGGGTAAGGATGGTCA+AGG | 0.645224 | 7_3:-66760082 | Msa1118170:intron |
| ACTCTTAAATCTGTGCATCA+CGG | 0.647938 | 7_3:-66757361 | Msa1118170:three_prime_UTR |
| CCACCATCCCATACCTCAGG+AGG | 0.669756 | 7_3:+66757914 | None:intergenic |
| GGACGTTTCAAGTACCAACC+GGG | 0.676233 | 7_3:-66759197 | Msa1118170:CDS |
| GCATTTGGGATGCTAGCAGG+AGG | 0.697016 | 7_3:-66759164 | Msa1118170:CDS |
| TGGGTGAATTGATGAGCCAG+TGG | 0.704413 | 7_3:-66762203 | Msa1118170:five_prime_UTR |
| AAACCCAAATGACAAGACCA+AGG | 0.722764 | 7_3:-66758993 | Msa1118170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAATAATAATTAATAAT+TGG | + | chr7_3:66758174-66758193 | None:intergenic | 0.0% |
| !! | TTATTAATTATTATTATAAA+TGG | - | chr7_3:66758175-66758194 | Msa1118170:intron | 0.0% |
| !! | AACAATAAATTAAAAAACAA+AGG | + | chr7_3:66757903-66757922 | None:intergenic | 10.0% |
| !!! | GTAAATAATTTTAAGAAATA+AGG | + | chr7_3:66759154-66759173 | None:intergenic | 10.0% |
| !!! | TAATTTTTTAGTAAAAAAAC+AGG | + | chr7_3:66759870-66759889 | None:intergenic | 10.0% |
| !!! | CTAAAAAATTACATTTTTAT+TGG | - | chr7_3:66759879-66759898 | Msa1118170:CDS | 10.0% |
| !!! | ATCTAATTTTAATCTAGATA+CGG | - | chr7_3:66757017-66757036 | Msa1118170:three_prime_UTR | 15.0% |
| !! | ACAATAAAAAAAAACTATGT+TGG | + | chr7_3:66757485-66757504 | None:intergenic | 15.0% |
| !! | CATTATCAAATATTTAGTTA+AGG | + | chr7_3:66758401-66758420 | None:intergenic | 15.0% |
| !!! | TACTTATTTTTCATGTTATT+TGG | - | chr7_3:66758492-66758511 | Msa1118170:intron | 15.0% |
| !!! | TCAAATCTTGAATTATTTTA+AGG | - | chr7_3:66759805-66759824 | Msa1118170:intron | 15.0% |
| !!! | GAAATTTTAATGTTATTAAC+AGG | - | chr7_3:66760904-66760923 | Msa1118170:intron | 15.0% |
| !!! | TTTATTAGTGTTATTGTTAT+TGG | - | chr7_3:66761267-66761286 | Msa1118170:intron | 15.0% |
| !!! | ACTTATTTTAGTATAAAAAG+TGG | - | chr7_3:66761320-66761339 | Msa1118170:intron | 15.0% |
| !!! | ATCAATTTTTTCGATAACTT+TGG | + | chr7_3:66757068-66757087 | None:intergenic | 20.0% |
| !! | TATCGAAAAAATTGATGAAT+TGG | - | chr7_3:66757072-66757091 | Msa1118170:three_prime_UTR | 20.0% |
| !! | ATCGAAAAAATTGATGAATT+GGG | - | chr7_3:66757073-66757092 | Msa1118170:three_prime_UTR | 20.0% |
| !! | AAATCCATGATTTGAAAAAT+GGG | + | chr7_3:66757247-66757266 | None:intergenic | 20.0% |
| !! | AAAATCCATGATTTGAAAAA+TGG | + | chr7_3:66757248-66757267 | None:intergenic | 20.0% |
| !!! | TTTCTGGAAATTTTGAATTT+TGG | - | chr7_3:66757441-66757460 | Msa1118170:three_prime_UTR | 20.0% |
| !!! | TTCTGGAAATTTTGAATTTT+GGG | - | chr7_3:66757442-66757461 | Msa1118170:three_prime_UTR | 20.0% |
| !!! | GATGTTAATGATGTTTTTTA+AGG | - | chr7_3:66757517-66757536 | Msa1118170:three_prime_UTR | 20.0% |
| !!! | ATCATCTTTATGATTTTCAT+TGG | - | chr7_3:66757638-66757657 | Msa1118170:exon | 20.0% |
| !!! | GACTTTGCTTAAATAAATTT+TGG | - | chr7_3:66757798-66757817 | Msa1118170:intron | 20.0% |
| !!! | TGTTTTATGTCATATTAGTA+TGG | - | chr7_3:66757866-66757885 | Msa1118170:CDS | 20.0% |
| !!! | ATTCTTGAAGATTAGAATTT+TGG | - | chr7_3:66757954-66757973 | Msa1118170:intron | 20.0% |
| !!! | TTTCGAAAATAGTTTTTTCT+TGG | - | chr7_3:66758084-66758103 | Msa1118170:intron | 20.0% |
| !! | TTAAATTGTTTATCCAAACA+TGG | + | chr7_3:66758880-66758899 | None:intergenic | 20.0% |
| !! | ACAAATAAGCAAGTAATTAA+TGG | + | chr7_3:66759364-66759383 | None:intergenic | 20.0% |
| !! | TTGCTTATTTGTCAAAAATA+TGG | - | chr7_3:66759372-66759391 | Msa1118170:intron | 20.0% |
| !!! | TCTTTTTGTCATTTGATATA+TGG | - | chr7_3:66759781-66759800 | Msa1118170:intron | 20.0% |
| !!! | AAGTATATTTTCATTAGCAT+TGG | + | chr7_3:66760633-66760652 | None:intergenic | 20.0% |
| !! | TATCAAGAAAACATTGTATA+TGG | + | chr7_3:66760804-66760823 | None:intergenic | 20.0% |
| !!! | AAAAGTCTAATGAAGTATTA+TGG | + | chr7_3:66760931-66760950 | None:intergenic | 20.0% |
| !!! | ATAATACTTCATTAGACTTT+TGG | - | chr7_3:66760930-66760949 | Msa1118170:intron | 20.0% |
| !! | ATCAATTAGTTATCTAATTG+AGG | - | chr7_3:66761219-66761238 | Msa1118170:intron | 20.0% |
| !! | ATAACACTAATAAAAAACAC+AGG | + | chr7_3:66761261-66761280 | None:intergenic | 20.0% |
| !!! | GTTTTTAACCGATAAAAAAA+AGG | - | chr7_3:66762189-66762208 | Msa1118170:five_prime_UTR | 20.0% |
| ! | TGGAATGAATGAGAATAAAA+GGG | + | chr7_3:66757207-66757226 | None:intergenic | 25.0% |
| ! | TTGGAATGAATGAGAATAAA+AGG | + | chr7_3:66757208-66757227 | None:intergenic | 25.0% |
| !! | AAAATGGGTTTGTGAAAAAT+GGG | + | chr7_3:66757232-66757251 | None:intergenic | 25.0% |
| !! | AAAAATGGGTTTGTGAAAAA+TGG | + | chr7_3:66757233-66757252 | None:intergenic | 25.0% |
| ! | TCAGAAAATCAAATACTTGT+TGG | - | chr7_3:66757277-66757296 | Msa1118170:three_prime_UTR | 25.0% |
| !!! | TCTGCTTTGAATTTTTCATA+TGG | - | chr7_3:66757401-66757420 | Msa1118170:three_prime_UTR | 25.0% |
| !!! | CTGCTTTGAATTTTTCATAT+GGG | - | chr7_3:66757402-66757421 | Msa1118170:three_prime_UTR | 25.0% |
| !!! | CTTATTGACTTTTCATTTTC+TGG | - | chr7_3:66757425-66757444 | Msa1118170:three_prime_UTR | 25.0% |
| !! | CTTTATGATTTTCATTGGAA+TGG | - | chr7_3:66757643-66757662 | Msa1118170:CDS | 25.0% |
| ! | TAAATTTCTGTTTATGCACT+TGG | - | chr7_3:66757694-66757713 | Msa1118170:CDS | 25.0% |
| !!! | CAAACTGAAATTTTTTCAGA+TGG | + | chr7_3:66757982-66758001 | None:intergenic | 25.0% |
| !!! | AAAATAGTTTTTTCTTGGTC+TGG | - | chr7_3:66758089-66758108 | Msa1118170:intron | 25.0% |
| ! | TTTCACTTGTGTAAGAAATA+AGG | + | chr7_3:66758370-66758389 | None:intergenic | 25.0% |
| ! | ACGTAATGAAATAATTAGAC+TGG | + | chr7_3:66758756-66758775 | None:intergenic | 25.0% |
| ! | TTTATAGTAGCAAGTATAGT+AGG | - | chr7_3:66758847-66758866 | Msa1118170:intron | 25.0% |
| ! | AACAAGCTTAAAACAACATA+TGG | - | chr7_3:66759042-66759061 | Msa1118170:intron | 25.0% |
| !! | TTACAAATCTTTTCTTGTCA+TGG | - | chr7_3:66759170-66759189 | Msa1118170:CDS | 25.0% |
| !!! | AACAAGCTATTTTTCAAACA+GGG | - | chr7_3:66759197-66759216 | Msa1118170:CDS | 25.0% |
| !! | ACATTTTGAACTAGTTATCA+AGG | - | chr7_3:66759287-66759306 | Msa1118170:intron | 25.0% |
| !! | TCATAAGTTAGAAAAAGCAT+AGG | + | chr7_3:66759341-66759360 | None:intergenic | 25.0% |
| ! | TGTGTAAAAATAGTTACCTT+TGG | + | chr7_3:66759479-66759498 | None:intergenic | 25.0% |
| !!! | ACTATTTTTACACAGTTTTC+AGG | - | chr7_3:66759485-66759504 | Msa1118170:intron | 25.0% |
| !!! | CTATTTTTACACAGTTTTCA+GGG | - | chr7_3:66759486-66759505 | Msa1118170:intron | 25.0% |
| ! | ACGGTGAAAATTATGAAAAT+GGG | + | chr7_3:66759515-66759534 | None:intergenic | 25.0% |
| ! | ATGACAAAAAGAAAAGTAGT+TGG | + | chr7_3:66759773-66759792 | None:intergenic | 25.0% |
| ! | TAAGATCTGAAAAAATCTTC+TGG | - | chr7_3:66759953-66759972 | Msa1118170:intron | 25.0% |
| ! | ATATGTCTTACTAACATACT+TGG | + | chr7_3:66760178-66760197 | None:intergenic | 25.0% |
| ! | AATATCCTCAAATGTAACAT+TGG | + | chr7_3:66760343-66760362 | None:intergenic | 25.0% |
| !! | ATTTGAGGATATTCTTTTGA+AGG | - | chr7_3:66760350-66760369 | Msa1118170:intron | 25.0% |
| ! | GAATTTATGAACTTTAGACT+TGG | - | chr7_3:66760419-66760438 | Msa1118170:intron | 25.0% |
| !!! | TAGTATATTTTAAACCGATC+TGG | + | chr7_3:66760699-66760718 | None:intergenic | 25.0% |
| ! | AATATACTATGTGTTGAATC+AGG | - | chr7_3:66760710-66760729 | Msa1118170:CDS | 25.0% |
| !!! | TAGCTAGATTTTTCAAATCA+AGG | + | chr7_3:66760853-66760872 | None:intergenic | 25.0% |
| ! | TGGAAGAAATTAATAGAACT+TGG | - | chr7_3:66760950-66760969 | Msa1118170:intron | 25.0% |
| ! | CAGATAGCATATTATAAAAG+TGG | + | chr7_3:66761050-66761069 | None:intergenic | 25.0% |
| ! | CTAGCAAATCATATTAATCA+TGG | + | chr7_3:66761095-66761114 | None:intergenic | 25.0% |
| !!! | ATTAATATGATTTGCTAGCT+TGG | - | chr7_3:66761097-66761116 | Msa1118170:intron | 25.0% |
| !!! | TTAATATGATTTGCTAGCTT+GGG | - | chr7_3:66761098-66761117 | Msa1118170:intron | 25.0% |
| ! | AATTAGTTATCTAATTGAGG+AGG | - | chr7_3:66761222-66761241 | Msa1118170:intron | 25.0% |
| !!! | AATACGTAGAAATGTCATTT+TGG | + | chr7_3:66761501-66761520 | None:intergenic | 25.0% |
| !! | AATGACATTTCTACGTATTT+TGG | - | chr7_3:66761502-66761521 | Msa1118170:intron | 25.0% |
| ! | TTGGCTAATTGTAATGTAAT+AGG | - | chr7_3:66761521-66761540 | Msa1118170:intron | 25.0% |
| ! | TGGCTAATTGTAATGTAATA+GGG | - | chr7_3:66761522-66761541 | Msa1118170:intron | 25.0% |
| ! | TCAATATCTGAAAATCGTTA+TGG | + | chr7_3:66761570-66761589 | None:intergenic | 25.0% |
| !! | ATTTTCAGATATTGAGATGT+GGG | - | chr7_3:66761575-66761594 | Msa1118170:intron | 25.0% |
| !!! | TTTTTTTTTGGTTAAGAGTC+TGG | - | chr7_3:66761769-66761788 | Msa1118170:intron | 25.0% |
| !!! | TTTTTTTTGGTTAAGAGTCT+GGG | - | chr7_3:66761770-66761789 | Msa1118170:intron | 25.0% |
| !!! | AAGTTTTGAAACTAAATGCA+TGG | + | chr7_3:66761814-66761833 | None:intergenic | 25.0% |
| ! | TTTCAAAATCTCCTTAAACT+TGG | - | chr7_3:66761977-66761996 | Msa1118170:CDS | 25.0% |
| ! | TTCAAAATCTCCTTAAACTT+GGG | - | chr7_3:66761978-66761997 | Msa1118170:CDS | 25.0% |
| !! | TCATTTCTCTTTTCTTTAGA+TGG | + | chr7_3:66762066-66762085 | None:intergenic | 25.0% |
| ! | TTTAACCGATAAAAAAAAGG+AGG | - | chr7_3:66762192-66762211 | Msa1118170:five_prime_UTR | 25.0% |
| !!! | GATAACCTCCTTTTTTTTAT+CGG | + | chr7_3:66762200-66762219 | None:intergenic | 25.0% |
| GAATGAGAATAAAAGGGAAT+GGG | + | chr7_3:66757201-66757220 | None:intergenic | 30.0% | |
| TGAATGAGAATAAAAGGGAA+TGG | + | chr7_3:66757202-66757221 | None:intergenic | 30.0% | |
| !! | CAAACCCATTTTTCAAATCA+TGG | - | chr7_3:66757240-66757259 | Msa1118170:three_prime_UTR | 30.0% |
| AAAAATTCAAAGCAGAAGCA+AGG | + | chr7_3:66757397-66757416 | None:intergenic | 30.0% | |
| !! | ATTTTGGGTCTATTTTGTCT+TGG | - | chr7_3:66757457-66757476 | Msa1118170:three_prime_UTR | 30.0% |
| GTTATGAAGTTCTTTCTGTA+TGG | - | chr7_3:66757601-66757620 | Msa1118170:three_prime_UTR | 30.0% | |
| AGTTATGTGATTTGAACTCA+TGG | - | chr7_3:66757668-66757687 | Msa1118170:CDS | 30.0% | |
| GTTATGTGATTTGAACTCAT+GGG | - | chr7_3:66757669-66757688 | Msa1118170:CDS | 30.0% | |
| !! | TCTTCAAGAATTTCTAGTGA+GGG | + | chr7_3:66757945-66757964 | None:intergenic | 30.0% |
| !! | ATCTTCAAGAATTTCTAGTG+AGG | + | chr7_3:66757946-66757965 | None:intergenic | 30.0% |
| ! | ATTTTCGAAACAGAAAAGCA+TGG | + | chr7_3:66758074-66758093 | None:intergenic | 30.0% |
| !! | GGTTTGTTAGCAGATTTATA+TGG | - | chr7_3:66758137-66758156 | Msa1118170:intron | 30.0% |
| ATGTGTTATAGAGTTCACAA+TGG | - | chr7_3:66758209-66758228 | Msa1118170:intron | 30.0% | |
| ! | GAGTTCACAATGGTATTTTA+AGG | - | chr7_3:66758219-66758238 | Msa1118170:intron | 30.0% |
| GATTTATGTTGTACTTGCAT+TGG | - | chr7_3:66758244-66758263 | Msa1118170:intron | 30.0% | |
| ! | ACAATGCAAGTTTTCACTAA+TGG | - | chr7_3:66758342-66758361 | Msa1118170:intron | 30.0% |
| CATTATCTTAGGATTCACTT+TGG | + | chr7_3:66758427-66758446 | None:intergenic | 30.0% | |
| GCTTCACTTTACATTATCTT+AGG | + | chr7_3:66758438-66758457 | None:intergenic | 30.0% | |
| AAACACGTAGATGATATGAA+TGG | + | chr7_3:66758553-66758572 | None:intergenic | 30.0% | |
| AAGTGAACTTTGCAACATTA+TGG | + | chr7_3:66758639-66758658 | None:intergenic | 30.0% | |
| ! | TTTTACAACTTAAGCTATCC+TGG | - | chr7_3:66759007-66759026 | Msa1118170:CDS | 30.0% |
| ! | TTAAGAAATAAGGGCATGTT+TGG | + | chr7_3:66759144-66759163 | None:intergenic | 30.0% |
| !!! | GAACAAGCTATTTTTCAAAC+AGG | - | chr7_3:66759196-66759215 | Msa1118170:CDS | 30.0% |
| !!! | ACAAGCTATTTTTCAAACAG+GGG | - | chr7_3:66759198-66759217 | Msa1118170:CDS | 30.0% |
| CACGGTGAAAATTATGAAAA+TGG | + | chr7_3:66759516-66759535 | None:intergenic | 30.0% | |
| ! | CATTTTCATAATTTTCACCG+TGG | - | chr7_3:66759514-66759533 | Msa1118170:intron | 30.0% |
| TGAGTTCCAATTCATTCTAA+TGG | - | chr7_3:66759694-66759713 | Msa1118170:intron | 30.0% | |
| AGTGATCCATTAGAATGAAT+TGG | + | chr7_3:66759703-66759722 | None:intergenic | 30.0% | |
| ATTAATTGCACTAGTAACGA+TGG | + | chr7_3:66760006-66760025 | None:intergenic | 30.0% | |
| ! | TTTTTGATGTATCTGCTTTC+AGG | - | chr7_3:66760076-66760095 | Msa1118170:CDS | 30.0% |
| ! | TTTTGATGTATCTGCTTTCA+GGG | - | chr7_3:66760077-66760096 | Msa1118170:CDS | 30.0% |
| TACTAACATACTTGGAACAT+TGG | + | chr7_3:66760170-66760189 | None:intergenic | 30.0% | |
| !! | TGTTTGCTTGTTGTCATTTA+AGG | - | chr7_3:66760260-66760279 | Msa1118170:intron | 30.0% |
| AGTATCATATATCAAGTGGA+AGG | + | chr7_3:66760389-66760408 | None:intergenic | 30.0% | |
| !! | GAAGAGTATCATATATCAAG+TGG | + | chr7_3:66760393-66760412 | None:intergenic | 30.0% |
| TGGTTTAGATTGATCCATTA+CGG | - | chr7_3:66760439-66760458 | Msa1118170:intron | 30.0% | |
| AATATACTTATATGCTGTGC+AGG | - | chr7_3:66760644-66760663 | Msa1118170:CDS | 30.0% | |
| !! | TAATATGATTTGCTAGCTTG+GGG | - | chr7_3:66761099-66761118 | Msa1118170:intron | 30.0% |
| ! | TAAGTAGAAATGTGCTTTTC+AGG | + | chr7_3:66761305-66761324 | None:intergenic | 30.0% |
| ! | GATTTTCAGATATTGAGATG+TGG | - | chr7_3:66761574-66761593 | Msa1118170:intron | 30.0% |
| !!! | AGTTTTATTAAATGACCGTG+AGG | + | chr7_3:66762008-66762027 | None:intergenic | 30.0% |
| GAATAAAAGGGAATGGGTAT+TGG | + | chr7_3:66757195-66757214 | None:intergenic | 35.0% | |
| CTTTGGACTTCTTAGATGAA+AGG | + | chr7_3:66757348-66757367 | None:intergenic | 35.0% | |
| CTTTCATCTAAGAAGTCCAA+AGG | - | chr7_3:66757346-66757365 | Msa1118170:three_prime_UTR | 35.0% | |
| TTATGCACTTGGTTAAAGCA+TGG | - | chr7_3:66757705-66757724 | Msa1118170:CDS | 35.0% | |
| ! | AGCTGATCCATATGATTTGT+TGG | - | chr7_3:66757776-66757795 | Msa1118170:intron | 35.0% |
| GCAAAGTCCAACAAATCATA+TGG | + | chr7_3:66757786-66757805 | None:intergenic | 35.0% | |
| GGTTTATGTTTACTCCATAC+TGG | - | chr7_3:66758036-66758055 | Msa1118170:intron | 35.0% | |
| !! | TTTTTCTTGGTCTGGTTTCA+TGG | - | chr7_3:66758097-66758116 | Msa1118170:intron | 35.0% |
| GTTAGCAGATTTATATGGCT+AGG | - | chr7_3:66758142-66758161 | Msa1118170:intron | 35.0% | |
| ! | TATGTTGTACTTGCATTGGT+TGG | - | chr7_3:66758248-66758267 | Msa1118170:intron | 35.0% |
| CTTACACAAGTGAAAGTGAA+AGG | - | chr7_3:66758375-66758394 | Msa1118170:intron | 35.0% | |
| CAACTTATGTGTTGTCCAAT+TGG | + | chr7_3:66758697-66758716 | None:intergenic | 35.0% | |
| AGCTATCCTGGAAAGTTTAT+TGG | - | chr7_3:66759019-66759038 | Msa1118170:intron | 35.0% | |
| CTTGTTCCAATAAACTTTCC+AGG | + | chr7_3:66759028-66759047 | None:intergenic | 35.0% | |
| !! | CTATTTTTCAAACAGGGGTA+AGG | - | chr7_3:66759203-66759222 | Msa1118170:intron | 35.0% |
| ACCATATACTCCTACAACTT+TGG | - | chr7_3:66759251-66759270 | Msa1118170:intron | 35.0% | |
| ! | TCCAAAGTTGTAGGAGTATA+TGG | + | chr7_3:66759255-66759274 | None:intergenic | 35.0% |
| ACATCAGAATCCAAAGTTGT+AGG | + | chr7_3:66759264-66759283 | None:intergenic | 35.0% | |
| ACAACTTTGGATTCTGATGT+TGG | - | chr7_3:66759264-66759283 | Msa1118170:intron | 35.0% | |
| ATCTCCAATGTGTATCTCTT+TGG | - | chr7_3:66759618-66759637 | Msa1118170:intron | 35.0% | |
| ATGTCCAAAGAGATACACAT+TGG | + | chr7_3:66759625-66759644 | None:intergenic | 35.0% | |
| GGAACTCATCATAGTGAATT+GGG | + | chr7_3:66759682-66759701 | None:intergenic | 35.0% | |
| TGGAACTCATCATAGTGAAT+TGG | + | chr7_3:66759683-66759702 | None:intergenic | 35.0% | |
| AGTGTAACAACTACTCTTCT+TGG | - | chr7_3:66759733-66759752 | Msa1118170:intron | 35.0% | |
| CTATGCCAATGTTACATTTG+AGG | - | chr7_3:66760335-66760354 | Msa1118170:intron | 35.0% | |
| TTTAGATTGATCCATTACGG+AGG | - | chr7_3:66760442-66760461 | Msa1118170:intron | 35.0% | |
| TTGCATAAGGAAACAAACTC+AGG | + | chr7_3:66760587-66760606 | None:intergenic | 35.0% | |
| ATATTTGTCGGCATTGCATA+AGG | + | chr7_3:66760600-66760619 | None:intergenic | 35.0% | |
| TGCCGACAAATATTTCAAAC+TGG | - | chr7_3:66760607-66760626 | Msa1118170:CDS | 35.0% | |
| ! | GGCCAGTTTGAAATATTTGT+CGG | + | chr7_3:66760612-66760631 | None:intergenic | 35.0% |
| TTGCTACTAACTATCCAGAT+CGG | - | chr7_3:66760682-66760701 | Msa1118170:CDS | 35.0% | |
| GATATCAAGACCAACTTAAG+AGG | + | chr7_3:66761132-66761151 | None:intergenic | 35.0% | |
| ATTACCTTAATGTCTTGTGC+TGG | + | chr7_3:66761453-66761472 | None:intergenic | 35.0% | |
| !!! | ACGTAGAAATGTCATTTTGG+AGG | + | chr7_3:66761498-66761517 | None:intergenic | 35.0% |
| TCGATGAGAACAATCAAAAC+TGG | + | chr7_3:66761669-66761688 | None:intergenic | 35.0% | |
| !!! | AGTTTTGATTGTTCTCATCG+AGG | - | chr7_3:66761668-66761687 | Msa1118170:intron | 35.0% |
| ATCAGTTTCTTGATCAGCTA+AGG | + | chr7_3:66761729-66761748 | None:intergenic | 35.0% | |
| !! | ACTATGCATTTTCTAGCACA+TGG | + | chr7_3:66761905-66761924 | None:intergenic | 35.0% |
| ACTCTTAAATCTGTGCATCA+CGG | - | chr7_3:66761934-66761953 | Msa1118170:intron | 35.0% | |
| !! | TAAAAGGGAATGGGTATTGG+AGG | + | chr7_3:66757192-66757211 | None:intergenic | 40.0% |
| ! | GGGTTTGTGAAAAATGGGTT+TGG | + | chr7_3:66757227-66757246 | None:intergenic | 40.0% |
| ATAGATAGCACCAACACCAA+TGG | + | chr7_3:66757323-66757342 | None:intergenic | 40.0% | |
| TGGGTCAAAGATGAAACCTT+TGG | + | chr7_3:66757365-66757384 | None:intergenic | 40.0% | |
| ! | AGAAGCAAGGAATCTGAAGT+GGG | + | chr7_3:66757384-66757403 | None:intergenic | 40.0% |
| ATAAACCACCAAGCAGAGAA+AGG | + | chr7_3:66758023-66758042 | None:intergenic | 40.0% | |
| GGAATCAAGATCAACCAGTA+TGG | + | chr7_3:66758053-66758072 | None:intergenic | 40.0% | |
| AAGCTCATTGCACTCAAACT+TGG | - | chr7_3:66758454-66758473 | Msa1118170:intron | 40.0% | |
| CAAGTTTAAACTCCCTGAAC+TGG | + | chr7_3:66758597-66758616 | None:intergenic | 40.0% | |
| !! | TCTGTTTTGGGTCTTCCAAT+TGG | - | chr7_3:66758679-66758698 | Msa1118170:intron | 40.0% |
| TTGGACAACACATAAGTTGC+AGG | - | chr7_3:66758698-66758717 | Msa1118170:intron | 40.0% | |
| GTAGCAAGTATAGTAGGACT+CGG | - | chr7_3:66758853-66758872 | Msa1118170:intron | 40.0% | |
| ! | TTTTCAAACAGGGGTAAGGA+TGG | - | chr7_3:66759207-66759226 | Msa1118170:intron | 40.0% |
| CTTGATTAGATGTACCCTCA+AGG | - | chr7_3:66759395-66759414 | Msa1118170:intron | 40.0% | |
| ATTAGATGTACCCTCAAGGA+AGG | - | chr7_3:66759399-66759418 | Msa1118170:intron | 40.0% | |
| ! | TTGAATTGTGTGTCGCTGTT+GGG | + | chr7_3:66760030-66760049 | None:intergenic | 40.0% |
| AAACCCAAATGACAAGACCA+AGG | - | chr7_3:66760302-66760321 | Msa1118170:intron | 40.0% | |
| CACTGAAAAAACCTCCGTAA+TGG | + | chr7_3:66760456-66760475 | None:intergenic | 40.0% | |
| GTGGTCATGGTCAAGTTAAA+GGG | + | chr7_3:66760982-66761001 | None:intergenic | 40.0% | |
| TGTGGTCATGGTCAAGTTAA+AGG | + | chr7_3:66760983-66761002 | None:intergenic | 40.0% | |
| !!! | GAAATGTGCTTTTCAGGTAC+AGG | + | chr7_3:66761299-66761318 | None:intergenic | 40.0% |
| GTTAAGAGTCTGGGAAACAT+TGG | - | chr7_3:66761779-66761798 | Msa1118170:intron | 40.0% | |
| TTAAACTTGGGAATGCCTCA+CGG | - | chr7_3:66761990-66762009 | Msa1118170:CDS | 40.0% | |
| GAAGAGTGGTCACAGTGAAA+GGG | + | chr7_3:66757132-66757151 | None:intergenic | 45.0% | |
| AGAAGAGTGGTCACAGTGAA+AGG | + | chr7_3:66757133-66757152 | None:intergenic | 45.0% | |
| !! | GAGGGTGTTTAGAAGAAGAG+TGG | + | chr7_3:66757146-66757165 | None:intergenic | 45.0% |
| GAAGAGAGTGAGCTAATGGA+GGG | + | chr7_3:66757164-66757183 | None:intergenic | 45.0% | |
| TGAAGAGAGTGAGCTAATGG+AGG | + | chr7_3:66757165-66757184 | None:intergenic | 45.0% | |
| AGGTGAAGAGAGTGAGCTAA+TGG | + | chr7_3:66757168-66757187 | None:intergenic | 45.0% | |
| ACCAATGGCTACAACAGCAA+CGG | + | chr7_3:66757308-66757327 | None:intergenic | 45.0% | |
| CAGAAGCAAGGAATCTGAAG+TGG | + | chr7_3:66757385-66757404 | None:intergenic | 45.0% | |
| CTAGAAAGCCTTTCTCTGCT+TGG | - | chr7_3:66758012-66758031 | Msa1118170:intron | 45.0% | |
| ! | CATTTTCCTCCGCACACATA+AGG | - | chr7_3:66758298-66758317 | Msa1118170:intron | 45.0% |
| !! | ACATAAGGTGCATCGGTTCT+TGG | - | chr7_3:66758313-66758332 | Msa1118170:intron | 45.0% |
| ! | TAAACTCCCTGAACTGGTCT+GGG | + | chr7_3:66758591-66758610 | None:intergenic | 45.0% |
| TTAAACTCCCTGAACTGGTC+TGG | + | chr7_3:66758592-66758611 | None:intergenic | 45.0% | |
| ! | TCCAACACCCACATCTGTTT+TGG | - | chr7_3:66758666-66758685 | Msa1118170:intron | 45.0% |
| ! | CCAACACCCACATCTGTTTT+GGG | - | chr7_3:66758667-66758686 | Msa1118170:intron | 45.0% |
| GGAAGACCCAAAACAGATGT+GGG | + | chr7_3:66758676-66758695 | None:intergenic | 45.0% | |
| TGGAAGACCCAAAACAGATG+TGG | + | chr7_3:66758677-66758696 | None:intergenic | 45.0% | |
| TAAGGATGGTCAAGGTGATG+AGG | - | chr7_3:66759221-66759240 | Msa1118170:intron | 45.0% | |
| GGTGACTATCTGGCTGTTAA+AGG | - | chr7_3:66759452-66759471 | Msa1118170:intron | 45.0% | |
| TCTGGCTGTTAAAGGACCAA+AGG | - | chr7_3:66759460-66759479 | Msa1118170:intron | 45.0% | |
| GATAACCATGCTTGCAACCA+CGG | + | chr7_3:66759534-66759553 | None:intergenic | 45.0% | |
| ! | GTTGAATTGTGTGTCGCTGT+TGG | + | chr7_3:66760031-66760050 | None:intergenic | 45.0% |
| !! | GCACCTTGGTCTTGTCATTT+GGG | + | chr7_3:66760308-66760327 | None:intergenic | 45.0% |
| !! | TGCACCTTGGTCTTGTCATT+TGG | + | chr7_3:66760309-66760328 | None:intergenic | 45.0% |
| GGCATAGATAAGATGCACCT+TGG | + | chr7_3:66760322-66760341 | None:intergenic | 45.0% | |
| ATGGTCAAGTTAAAGGGTCG+CGG | + | chr7_3:66760976-66760995 | None:intergenic | 45.0% | |
| TTGACCATGACCACAAAGCT+AGG | - | chr7_3:66760988-66761007 | Msa1118170:intron | 45.0% | |
| !! | AAGACCTAGCTTTGTGGTCA+TGG | + | chr7_3:66760995-66761014 | None:intergenic | 45.0% |
| GGGCATATCACCTCTTAAGT+TGG | - | chr7_3:66761119-66761138 | Msa1118170:intron | 45.0% | |
| GTAATCTCTTTAGCCTCCTG+AGG | - | chr7_3:66761368-66761387 | Msa1118170:intron | 45.0% | |
| TCTTTAGCCTCCTGAGGTAT+GGG | - | chr7_3:66761374-66761393 | Msa1118170:intron | 45.0% | |
| TTAATGTCTTGTGCTGGAGG+AGG | + | chr7_3:66761447-66761466 | None:intergenic | 45.0% | |
| TCCTCCAGCACAAGACATTA+AGG | - | chr7_3:66761446-66761465 | Msa1118170:intron | 45.0% | |
| ACCTTAATGTCTTGTGCTGG+AGG | + | chr7_3:66761450-66761469 | None:intergenic | 45.0% | |
| !! | ATAGCCTTGTTCATTGGTGG+TGG | + | chr7_3:66761601-66761620 | None:intergenic | 45.0% |
| ACCACCAATGAACAAGGCTA+TGG | - | chr7_3:66761600-66761619 | Msa1118170:intron | 45.0% | |
| ! | CATCTCAGGAGCATATTCGA+GGG | + | chr7_3:66761641-66761660 | None:intergenic | 45.0% |
| CAAAACTGGAACTGCATCTC+AGG | + | chr7_3:66761655-66761674 | None:intergenic | 45.0% | |
| ! | GTGAGGCATTCCCAAGTTTA+AGG | + | chr7_3:66761991-66762010 | None:intergenic | 45.0% |
| !!! | TTTTTTAATTTATTGTTAAT+TGG | - | chr7_3:66757906-66757925 | Msa1118170:CDS | 5.0% |
| !!! | TAAATAATTTTAAGAAATAA+GGG | + | chr7_3:66759153-66759172 | None:intergenic | 5.0% |
| !!! | TTTTTTTTAAACTTTTTTTT+TGG | - | chr7_3:66761757-66761776 | Msa1118170:intron | 5.0% |
| TGGGTGAATTGATGAGCCAG+TGG | - | chr7_3:66757092-66757111 | Msa1118170:three_prime_UTR | 50.0% | |
| TGGTCACAGTGAAAGGGATC+TGG | + | chr7_3:66757126-66757145 | None:intergenic | 50.0% | |
| !! | AGGGAATGGGTATTGGAGGT+AGG | + | chr7_3:66757188-66757207 | None:intergenic | 50.0% |
| GCTGTTGTAGCCATTGGTGT+TGG | - | chr7_3:66757310-66757329 | Msa1118170:three_prime_UTR | 50.0% | |
| GAAAGCCTTTCTCTGCTTGG+TGG | - | chr7_3:66758015-66758034 | Msa1118170:intron | 50.0% | |
| TCCGCACACATAAGGTGCAT+CGG | - | chr7_3:66758306-66758325 | Msa1118170:intron | 50.0% | |
| ACCGATGCACCTTATGTGTG+CGG | + | chr7_3:66758310-66758329 | None:intergenic | 50.0% | |
| CTTGAACCCAGACCAGTTCA+GGG | - | chr7_3:66758582-66758601 | Msa1118170:intron | 50.0% | |
| CCCAAAACAGATGTGGGTGT+TGG | + | chr7_3:66758670-66758689 | None:intergenic | 50.0% | |
| CAGCGATACGAGAATATGGC+GGG | + | chr7_3:66758796-66758815 | None:intergenic | 50.0% | |
| CCAGCGATACGAGAATATGG+CGG | + | chr7_3:66758797-66758816 | None:intergenic | 50.0% | |
| CAGCCAGCGATACGAGAATA+TGG | + | chr7_3:66758800-66758819 | None:intergenic | 50.0% | |
| AGTAGGACTCGGACCATGTT+TGG | - | chr7_3:66758864-66758883 | Msa1118170:intron | 50.0% | |
| AACAGGGGTAAGGATGGTCA+AGG | - | chr7_3:66759213-66759232 | Msa1118170:intron | 50.0% | |
| GGTGTGACATCCTTCCTTGA+GGG | + | chr7_3:66759412-66759431 | None:intergenic | 50.0% | |
| TGGTGTGACATCCTTCCTTG+AGG | + | chr7_3:66759413-66759432 | None:intergenic | 50.0% | |
| CAACACGCATCTCACGGAAA+TGG | + | chr7_3:66759433-66759452 | None:intergenic | 50.0% | |
| CATTTCCGTGAGATGCGTGT+TGG | - | chr7_3:66759431-66759450 | Msa1118170:intron | 50.0% | |
| AGTCACCAACACGCATCTCA+CGG | + | chr7_3:66759439-66759458 | None:intergenic | 50.0% | |
| !! | GATGCGTGTTGGTGACTATC+TGG | - | chr7_3:66759442-66759461 | Msa1118170:intron | 50.0% |
| TTTCACCGTGGTTGCAAGCA+TGG | - | chr7_3:66759526-66759545 | Msa1118170:intron | 50.0% | |
| ! | GGGACGTTTCAAGTACCAAC+CGG | - | chr7_3:66760097-66760116 | Msa1118170:intron | 50.0% |
| ! | GGACGTTTCAAGTACCAACC+GGG | - | chr7_3:66760098-66760117 | Msa1118170:intron | 50.0% |
| ! | TTTCAAGTACCAACCGGGTG+AGG | - | chr7_3:66760103-66760122 | Msa1118170:intron | 50.0% |
| CCAAATGCTCTAACCTCACC+CGG | + | chr7_3:66760119-66760138 | None:intergenic | 50.0% | |
| ! | CGGGTGAGGTTAGAGCATTT+GGG | - | chr7_3:66760117-66760136 | Msa1118170:intron | 50.0% |
| ! | AGAGCATTTGGGATGCTAGC+AGG | - | chr7_3:66760128-66760147 | Msa1118170:intron | 50.0% |
| GCTGTGCAGGAAGAACTTGA+TGG | - | chr7_3:66760657-66760676 | Msa1118170:CDS | 50.0% | |
| CTCTTTAGCCTCCTGAGGTA+TGG | - | chr7_3:66761373-66761392 | Msa1118170:intron | 50.0% | |
| !! | GCCATAGCCTTGTTCATTGG+TGG | + | chr7_3:66761604-66761623 | None:intergenic | 50.0% |
| !! | GCAGCCATAGCCTTGTTCAT+TGG | + | chr7_3:66761607-66761626 | None:intergenic | 50.0% |
| ! | GCATCTCAGGAGCATATTCG+AGG | + | chr7_3:66761642-66761661 | None:intergenic | 50.0% |
| CTCATCGAGGAGCTTCATCA+TGG | - | chr7_3:66761681-66761700 | Msa1118170:intron | 50.0% | |
| GGATCTGGTGCAACTACCAC+TGG | + | chr7_3:66757111-66757130 | None:intergenic | 55.0% | |
| ! | GCCGTTGCTGTTGTAGCCAT+TGG | - | chr7_3:66757304-66757323 | Msa1118170:three_prime_UTR | 55.0% |
| TCATGGTTTCTGCGCGTCTC+AGG | - | chr7_3:66758114-66758133 | Msa1118170:intron | 55.0% | |
| CATGGTTTCTGCGCGTCTCA+GGG | - | chr7_3:66758115-66758134 | Msa1118170:intron | 55.0% | |
| ATGGTTTCTGCGCGTCTCAG+GGG | - | chr7_3:66758116-66758135 | Msa1118170:intron | 55.0% | |
| GATGCACCTTATGTGTGCGG+AGG | + | chr7_3:66758307-66758326 | None:intergenic | 55.0% | |
| GCTTGAACCCAGACCAGTTC+AGG | - | chr7_3:66758581-66758600 | Msa1118170:intron | 55.0% | |
| CCGCCATATTCTCGTATCGC+TGG | - | chr7_3:66758794-66758813 | Msa1118170:intron | 55.0% | |
| ATGCTCTAACCTCACCCGGT+TGG | + | chr7_3:66760115-66760134 | None:intergenic | 55.0% | |
| ! | CCGGGTGAGGTTAGAGCATT+TGG | - | chr7_3:66760116-66760135 | Msa1118170:intron | 55.0% |
| ! | GCATTTGGGATGCTAGCAGG+AGG | - | chr7_3:66760131-66760150 | Msa1118170:intron | 55.0% |
| !! | GCGTCGAAGACCTAGCTTTG+TGG | + | chr7_3:66761001-66761020 | None:intergenic | 55.0% |
| TAGCCTCCTGAGGTATGGGA+TGG | - | chr7_3:66761378-66761397 | Msa1118170:intron | 55.0% | |
| TGGGCCACCACCAATGAACA+AGG | - | chr7_3:66761594-66761613 | Msa1118170:intron | 55.0% | |
| GAGCATATTCGAGGGCTTCC+AGG | + | chr7_3:66761633-66761652 | None:intergenic | 55.0% | |
| CCACCATCCCATACCTCAGG+AGG | + | chr7_3:66761384-66761403 | None:intergenic | 60.0% | |
| CCTCCTGAGGTATGGGATGG+TGG | - | chr7_3:66761381-66761400 | Msa1118170:intron | 60.0% | |
| ACGCCACCATCCCATACCTC+AGG | + | chr7_3:66761387-66761406 | None:intergenic | 60.0% | |
| ! | GAGGTATGGGATGGTGGCGT+CGG | - | chr7_3:66761387-66761406 | Msa1118170:intron | 60.0% |
| CAAGGCTATGGCTGCTCACC+TGG | - | chr7_3:66761612-66761631 | Msa1118170:intron | 60.0% | |
| GGGATGCTAGCAGGAGGCTC+TGG | - | chr7_3:66760137-66760156 | Msa1118170:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 66756998 | 66762319 | 66756998 | ID=Msa1118170;Name=Msa1118170 |
| chr7_3 | mRNA | 66756998 | 66762319 | 66756998 | ID=Msa1118170-mRNA-1;Parent=Msa1118170;Name=Msa1118170-mRNA-1;_AED=0.04;_eAED=0.04;_QI=261|0.77|0.8|0.9|1|1|10|644|293 |
| chr7_3 | exon | 66756998 | 66757734 | 66756998 | ID=Msa1118170-mRNA-1:exon:16246;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66757850 | 66757936 | 66757850 | ID=Msa1118170-mRNA-1:exon:16245;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66758586 | 66758651 | 66758586 | ID=Msa1118170-mRNA-1:exon:16244;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66758946 | 66759035 | 66758946 | ID=Msa1118170-mRNA-1:exon:16243;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66759139 | 66759219 | 66759139 | ID=Msa1118170-mRNA-1:exon:16242;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66759836 | 66759913 | 66759836 | ID=Msa1118170-mRNA-1:exon:16241;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66760009 | 66760099 | 66760009 | ID=Msa1118170-mRNA-1:exon:16240;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66760598 | 66760776 | 66760598 | ID=Msa1118170-mRNA-1:exon:16239;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66761798 | 66761805 | 66761798 | ID=Msa1118170-mRNA-1:exon:16238;Parent=Msa1118170-mRNA-1 |
| chr7_3 | exon | 66761950 | 66762319 | 66761950 | ID=Msa1118170-mRNA-1:exon:16237;Parent=Msa1118170-mRNA-1 |
| chr7_3 | five_prime_UTR | 66762059 | 66762319 | 66762059 | ID=Msa1118170-mRNA-1:five_prime_utr;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66761950 | 66762058 | 66761950 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66761798 | 66761805 | 66761798 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66760598 | 66760776 | 66760598 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66760009 | 66760099 | 66760009 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66759836 | 66759913 | 66759836 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66759139 | 66759219 | 66759139 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66758946 | 66759035 | 66758946 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66758586 | 66758651 | 66758586 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66757850 | 66757936 | 66757850 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | CDS | 66757642 | 66757734 | 66757642 | ID=Msa1118170-mRNA-1:cds;Parent=Msa1118170-mRNA-1 |
| chr7_3 | three_prime_UTR | 66756998 | 66757641 | 66756998 | ID=Msa1118170-mRNA-1:three_prime_utr;Parent=Msa1118170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
