Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0506750 | XP_003603858.2 | 94.953 | 634 | 14 | 2 | 1 | 633 | 1 | 617 | 0.0 | 1226 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0506750 | sp|Q9SFX3|OST1A_ARATH | 66.502 | 609 | 186 | 2 | 25 | 633 | 24 | 614 | 0.0 | 833 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0506750 | G7J5Z1 | 94.953 | 634 | 14 | 2 | 1 | 633 | 1 | 617 | 0.0 | 1226 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001800 | Msa0506750 | 0.823977 | 1.035732e-53 | -8.615850e-47 |
Msa0011060 | Msa0506750 | -0.800361 | 1.494404e-48 | -8.615850e-47 |
Msa0013270 | Msa0506750 | 0.816521 | 5.298365e-52 | -8.615850e-47 |
Msa0017710 | Msa0506750 | 0.823475 | 1.357972e-53 | -8.615850e-47 |
Msa0025570 | Msa0506750 | 0.821070 | 4.909947e-53 | -8.615850e-47 |
Msa0035730 | Msa0506750 | 0.827109 | 1.875447e-54 | -8.615850e-47 |
Msa0036810 | Msa0506750 | 0.818546 | 1.853065e-52 | -8.615850e-47 |
Msa0037680 | Msa0506750 | 0.802076 | 6.659066e-49 | -8.615850e-47 |
Msa0039750 | Msa0506750 | 0.857579 | 1.482317e-62 | -8.615850e-47 |
Msa0044310 | Msa0506750 | 0.800151 | 1.648994e-48 | -8.615850e-47 |
Msa0044530 | Msa0506750 | -0.859582 | 3.744051e-63 | -8.615850e-47 |
Msa0044780 | Msa0506750 | -0.829636 | 4.608103e-55 | -8.615850e-47 |
Msa0045620 | Msa0506750 | 0.809768 | 1.607216e-50 | -8.615850e-47 |
Msa0045810 | Msa0506750 | 0.807169 | 5.762843e-50 | -8.615850e-47 |
Msa0046970 | Msa0506750 | 0.813996 | 1.928797e-51 | -8.615850e-47 |
Msa0047560 | Msa0506750 | -0.804550 | 2.047159e-49 | -8.615850e-47 |
Msa0056230 | Msa0506750 | -0.801265 | 9.768050e-49 | -8.615850e-47 |
Msa0062190 | Msa0506750 | 0.802965 | 4.367483e-49 | -8.615850e-47 |
Msa0073110 | Msa0506750 | 0.819965 | 8.803980e-53 | -8.615850e-47 |
Msa0077570 | Msa0506750 | -0.801167 | 1.023079e-48 | -8.615850e-47 |
Msa0080370 | Msa0506750 | 0.837044 | 6.556315e-57 | -8.615850e-47 |
Msa0080440 | Msa0506750 | 0.809802 | 1.580462e-50 | -8.615850e-47 |
Msa0081030 | Msa0506750 | 0.821327 | 4.281841e-53 | -8.615850e-47 |
Msa0085690 | Msa0506750 | -0.827113 | 1.871546e-54 | -8.615850e-47 |
Msa0086620 | Msa0506750 | -0.817442 | 3.291238e-52 | -8.615850e-47 |
Msa0089540 | Msa0506750 | 0.819447 | 1.156061e-52 | -8.615850e-47 |
Msa0091220 | Msa0506750 | -0.858800 | 6.424497e-63 | -8.615850e-47 |
Msa0091240 | Msa0506750 | -0.860623 | 1.814868e-63 | -8.615850e-47 |
Msa0106540 | Msa0506750 | 0.820659 | 6.101340e-53 | -8.615850e-47 |
Msa0115700 | Msa0506750 | 0.801444 | 8.978104e-49 | -8.615850e-47 |
Msa0121320 | Msa0506750 | 0.816665 | 4.920175e-52 | -8.615850e-47 |
Msa0131810 | Msa0506750 | 0.839021 | 2.032307e-57 | -8.615850e-47 |
Msa0132080 | Msa0506750 | -0.817495 | 3.202165e-52 | -8.615850e-47 |
Msa0136180 | Msa0506750 | -0.804727 | 1.879720e-49 | -8.615850e-47 |
Msa0160380 | Msa0506750 | 0.822650 | 2.115030e-53 | -8.615850e-47 |
Msa0161960 | Msa0506750 | 0.810534 | 1.099153e-50 | -8.615850e-47 |
Msa0166180 | Msa0506750 | 0.821032 | 5.009969e-53 | -8.615850e-47 |
Msa0168380 | Msa0506750 | 0.835593 | 1.533094e-56 | -8.615850e-47 |
Msa0173250 | Msa0506750 | 0.861943 | 7.188228e-64 | -8.615850e-47 |
Msa0180210 | Msa0506750 | 0.810434 | 1.154709e-50 | -8.615850e-47 |
Msa0183310 | Msa0506750 | -0.817090 | 3.948338e-52 | -8.615850e-47 |
Msa0192050 | Msa0506750 | 0.832598 | 8.627706e-56 | -8.615850e-47 |
Msa0193680 | Msa0506750 | 0.803008 | 4.278852e-49 | -8.615850e-47 |
Msa0195230 | Msa0506750 | 0.839533 | 1.496908e-57 | -8.615850e-47 |
Msa0195260 | Msa0506750 | 0.839382 | 1.638425e-57 | -8.615850e-47 |
Msa0204970 | Msa0506750 | 0.800996 | 1.108950e-48 | -8.615850e-47 |
Msa0206370 | Msa0506750 | 0.814021 | 1.904748e-51 | -8.615850e-47 |
Msa0211460 | Msa0506750 | 0.838483 | 2.799070e-57 | -8.615850e-47 |
Msa0221180 | Msa0506750 | 0.808104 | 3.648567e-50 | -8.615850e-47 |
Msa0221460 | Msa0506750 | -0.824481 | 7.886435e-54 | -8.615850e-47 |
Msa0224250 | Msa0506750 | 0.800146 | 1.652888e-48 | -8.615850e-47 |
Msa0225070 | Msa0506750 | -0.803284 | 3.751393e-49 | -8.615850e-47 |
Msa0234170 | Msa0506750 | 0.824277 | 8.807747e-54 | -8.615850e-47 |
Msa0368640 | Msa0506750 | 0.802115 | 6.537085e-49 | -8.615850e-47 |
Msa0371350 | Msa0506750 | -0.842932 | 1.911273e-58 | -8.615850e-47 |
Msa0379480 | Msa0506750 | 0.824217 | 9.095905e-54 | -8.615850e-47 |
Msa0385030 | Msa0506750 | 0.818846 | 1.583839e-52 | -8.615850e-47 |
Msa0386880 | Msa0506750 | 0.846861 | 1.664170e-59 | -8.615850e-47 |
Msa0388210 | Msa0506750 | 0.825282 | 5.103830e-54 | -8.615850e-47 |
Msa0388250 | Msa0506750 | 0.846740 | 1.795819e-59 | -8.615850e-47 |
Msa0389690 | Msa0506750 | 0.804748 | 1.861596e-49 | -8.615850e-47 |
Msa0402770 | Msa0506750 | 0.813619 | 2.335083e-51 | -8.615850e-47 |
Msa0403740 | Msa0506750 | -0.810763 | 9.803684e-51 | -8.615850e-47 |
Msa0404140 | Msa0506750 | 0.803340 | 3.652513e-49 | -8.615850e-47 |
Msa0412580 | Msa0506750 | -0.817807 | 2.722323e-52 | -8.615850e-47 |
Msa0416210 | Msa0506750 | 0.814743 | 1.318963e-51 | -8.615850e-47 |
Msa0419420 | Msa0506750 | -0.833919 | 4.044475e-56 | -8.615850e-47 |
Msa0422820 | Msa0506750 | 0.834208 | 3.423741e-56 | -8.615850e-47 |
Msa0422900 | Msa0506750 | 0.821791 | 3.346383e-53 | -8.615850e-47 |
Msa0430130 | Msa0506750 | 0.805992 | 1.021197e-49 | -8.615850e-47 |
Msa0433630 | Msa0506750 | 0.826728 | 2.313456e-54 | -8.615850e-47 |
Msa0435280 | Msa0506750 | 0.838467 | 2.826306e-57 | -8.615850e-47 |
Msa0436100 | Msa0506750 | 0.920823 | 7.849695e-88 | -8.615850e-47 |
Msa0447870 | Msa0506750 | 0.801698 | 7.965600e-49 | -8.615850e-47 |
Msa0456450 | Msa0506750 | -0.811930 | 5.470943e-51 | -8.615850e-47 |
Msa0457070 | Msa0506750 | -0.821726 | 3.463623e-53 | -8.615850e-47 |
Msa0467170 | Msa0506750 | 0.831730 | 1.414645e-55 | -8.615850e-47 |
Msa0467330 | Msa0506750 | 0.836798 | 7.573907e-57 | -8.615850e-47 |
Msa0469060 | Msa0506750 | 0.812334 | 4.466351e-51 | -8.615850e-47 |
Msa0479480 | Msa0506750 | 0.810542 | 1.094680e-50 | -8.615850e-47 |
Msa0238960 | Msa0506750 | -0.806351 | 8.580931e-50 | -8.615850e-47 |
Msa0240540 | Msa0506750 | 0.809919 | 1.491633e-50 | -8.615850e-47 |
Msa0244820 | Msa0506750 | -0.820557 | 6.440139e-53 | -8.615850e-47 |
Msa0266140 | Msa0506750 | -0.800423 | 1.451604e-48 | -8.615850e-47 |
Msa0267450 | Msa0506750 | -0.836617 | 8.425586e-57 | -8.615850e-47 |
Msa0267510 | Msa0506750 | -0.835465 | 1.652269e-56 | -8.615850e-47 |
Msa0276800 | Msa0506750 | -0.801822 | 7.510840e-49 | -8.615850e-47 |
Msa0276850 | Msa0506750 | 0.863807 | 1.911792e-64 | -8.615850e-47 |
Msa0276860 | Msa0506750 | 0.860544 | 1.918194e-63 | -8.615850e-47 |
Msa0279000 | Msa0506750 | 0.853747 | 1.947595e-61 | -8.615850e-47 |
Msa0279810 | Msa0506750 | 0.816224 | 6.173667e-52 | -8.615850e-47 |
Msa0290800 | Msa0506750 | 0.832648 | 8.384726e-56 | -8.615850e-47 |
Msa0300670 | Msa0506750 | -0.826312 | 2.906756e-54 | -8.615850e-47 |
Msa0307430 | Msa0506750 | 0.806124 | 9.578214e-50 | -8.615850e-47 |
Msa0307630 | Msa0506750 | 0.811207 | 7.858944e-51 | -8.615850e-47 |
Msa0312740 | Msa0506750 | 0.814618 | 1.405613e-51 | -8.615850e-47 |
Msa0316000 | Msa0506750 | 0.831152 | 1.962563e-55 | -8.615850e-47 |
Msa0316720 | Msa0506750 | -0.808719 | 2.697785e-50 | -8.615850e-47 |
Msa0319220 | Msa0506750 | 0.815155 | 1.068447e-51 | -8.615850e-47 |
Msa0328870 | Msa0506750 | 0.825019 | 5.889872e-54 | -8.615850e-47 |
Msa0331070 | Msa0506750 | -0.824104 | 9.669312e-54 | -8.615850e-47 |
Msa0337760 | Msa0506750 | -0.822054 | 2.908479e-53 | -8.615850e-47 |
Msa0364030 | Msa0506750 | -0.810051 | 1.396797e-50 | -8.615850e-47 |
Msa0484210 | Msa0506750 | -0.831058 | 2.070207e-55 | -8.615850e-47 |
Msa0506750 | Msa0518410 | 0.811629 | 6.363227e-51 | -8.615850e-47 |
Msa0506750 | Msa0521510 | 0.815162 | 1.064957e-51 | -8.615850e-47 |
Msa0506750 | Msa0521530 | 0.810626 | 1.049601e-50 | -8.615850e-47 |
Msa0506750 | Msa0521610 | 0.828446 | 8.952211e-55 | -8.615850e-47 |
Msa0506750 | Msa0525880 | 0.812706 | 3.704065e-51 | -8.615850e-47 |
Msa0506750 | Msa0528310 | 0.828138 | 1.062162e-54 | -8.615850e-47 |
Msa0506750 | Msa0541880 | 0.806425 | 8.278440e-50 | -8.615850e-47 |
Msa0506750 | Msa0549900 | 0.835970 | 1.230779e-56 | -8.615850e-47 |
Msa0506750 | Msa0555280 | 0.808823 | 2.562476e-50 | -8.615850e-47 |
Msa0506750 | Msa0566290 | 0.806923 | 6.496230e-50 | -8.615850e-47 |
Msa0506750 | Msa0567330 | 0.822784 | 1.967808e-53 | -8.615850e-47 |
Msa0506750 | Msa0567570 | 0.827606 | 1.426134e-54 | -8.615850e-47 |
Msa0506750 | Msa0567610 | 0.812056 | 5.137510e-51 | -8.615850e-47 |
Msa0506750 | Msa0568290 | -0.803818 | 2.907049e-49 | -8.615850e-47 |
Msa0506750 | Msa0568460 | -0.826161 | 3.157734e-54 | -8.615850e-47 |
Msa0506750 | Msa0574900 | 0.805428 | 1.341497e-49 | -8.615850e-47 |
Msa0506750 | Msa0576320 | 0.819214 | 1.306385e-52 | -8.615850e-47 |
Msa0506750 | Msa0582460 | 0.804493 | 2.104095e-49 | -8.615850e-47 |
Msa0506750 | Msa0588500 | 0.804070 | 2.576894e-49 | -8.615850e-47 |
Msa0506750 | Msa0601380 | 0.860288 | 2.292338e-63 | -8.615850e-47 |
Msa0506750 | Msa0605530 | 0.826631 | 2.440416e-54 | -8.615850e-47 |
Msa0506750 | Msa0606820 | 0.821189 | 4.607454e-53 | -8.615850e-47 |
Msa0506750 | Msa0608820 | 0.822133 | 2.787869e-53 | -8.615850e-47 |
Msa0506750 | Msa0618990 | 0.803808 | 2.921090e-49 | -8.615850e-47 |
Msa0506750 | Msa0619320 | -0.801094 | 1.058885e-48 | -8.615850e-47 |
Msa0506750 | Msa0623310 | 0.810899 | 9.161740e-51 | -8.615850e-47 |
Msa0506750 | Msa0630440 | 0.838851 | 2.249046e-57 | -8.615850e-47 |
Msa0506750 | Msa0645390 | 0.802299 | 5.992398e-49 | -8.615850e-47 |
Msa0506750 | Msa0658120 | 0.802994 | 4.307298e-49 | -8.615850e-47 |
Msa0506750 | Msa0659020 | -0.826322 | 2.890743e-54 | -8.615850e-47 |
Msa0506750 | Msa0661480 | 0.969752 | 1.381803e-130 | -8.615850e-47 |
Msa0506750 | Msa0663290 | 0.810523 | 1.105055e-50 | -8.615850e-47 |
Msa0506750 | Msa0664070 | 0.809950 | 1.468680e-50 | -8.615850e-47 |
Msa0506750 | Msa0680370 | 0.819938 | 8.929114e-53 | -8.615850e-47 |
Msa0506750 | Msa0680450 | 0.807662 | 4.530392e-50 | -8.615850e-47 |
Msa0506750 | Msa0685390 | -0.822773 | 1.979801e-53 | -8.615850e-47 |
Msa0506750 | Msa0685610 | 0.810032 | 1.409863e-50 | -8.615850e-47 |
Msa0506750 | Msa0687220 | 0.816290 | 5.969132e-52 | -8.615850e-47 |
Msa0506750 | Msa0689830 | 0.836660 | 8.216099e-57 | -8.615850e-47 |
Msa0506750 | Msa0691610 | 0.820258 | 7.543425e-53 | -8.615850e-47 |
Msa0506750 | Msa0704690 | 0.806175 | 9.347142e-50 | -8.615850e-47 |
Msa0506750 | Msa0704780 | -0.806209 | 9.194291e-50 | -8.615850e-47 |
Msa0506750 | Msa0707360 | 0.831389 | 1.716311e-55 | -8.615850e-47 |
Msa0506750 | Msa0713080 | 0.815340 | 9.721948e-52 | -8.615850e-47 |
Msa0506750 | Msa0719270 | 0.831855 | 1.317742e-55 | -8.615850e-47 |
Msa0506750 | Msa0719750 | 0.804684 | 1.919195e-49 | -8.615850e-47 |
Msa0506750 | Msa0732970 | 0.855283 | 6.997946e-62 | -8.615850e-47 |
Msa0506750 | Msa0745140 | 0.829300 | 5.560651e-55 | -8.615850e-47 |
Msa0506750 | Msa0746650 | 0.844826 | 5.943100e-59 | -8.615850e-47 |
Msa0506750 | Msa0758780 | -0.806692 | 7.269839e-50 | -8.615850e-47 |
Msa0506750 | Msa0761830 | 0.814459 | 1.524332e-51 | -8.615850e-47 |
Msa0506750 | Msa0773960 | 0.871718 | 5.519921e-67 | -8.615850e-47 |
Msa0506750 | Msa0775220 | 0.808635 | 2.811533e-50 | -8.615850e-47 |
Msa0506750 | Msa0775660 | 0.847414 | 1.174260e-59 | -8.615850e-47 |
Msa0506750 | Msa0776640 | 0.828157 | 1.050776e-54 | -8.615850e-47 |
Msa0506750 | Msa0790650 | -0.818721 | 1.690549e-52 | -8.615850e-47 |
Msa0506750 | Msa0792410 | 0.809795 | 1.585992e-50 | -8.615850e-47 |
Msa0506750 | Msa0802760 | 0.837957 | 3.825520e-57 | -8.615850e-47 |
Msa0506750 | Msa0804170 | 0.812229 | 4.710019e-51 | -8.615850e-47 |
Msa0506750 | Msa0825920 | 0.831673 | 1.461225e-55 | -8.615850e-47 |
Msa0506750 | Msa0838620 | -0.838656 | 2.526180e-57 | -8.615850e-47 |
Msa0506750 | Msa0840520 | 0.837502 | 5.004628e-57 | -8.615850e-47 |
Msa0506750 | Msa0841050 | 0.820147 | 7.997075e-53 | -8.615850e-47 |
Msa0506750 | Msa0846900 | 0.820034 | 8.490033e-53 | -8.615850e-47 |
Msa0506750 | Msa0853590 | 0.823796 | 1.142028e-53 | -8.615850e-47 |
Msa0506750 | Msa0857260 | 0.825202 | 5.329168e-54 | -8.615850e-47 |
Msa0506750 | Msa0865420 | 0.814648 | 1.384352e-51 | -8.615850e-47 |
Msa0506750 | Msa0871420 | 0.802690 | 4.977241e-49 | -8.615850e-47 |
Msa0506750 | Msa0930770 | 0.847505 | 1.108442e-59 | -8.615850e-47 |
Msa0506750 | Msa0945030 | 0.813974 | 1.950893e-51 | -8.615850e-47 |
Msa0506750 | Msa0964400 | -0.821535 | 3.834671e-53 | -8.615850e-47 |
Msa0506750 | Msa0967780 | 0.803112 | 4.072784e-49 | -8.615850e-47 |
Msa0506750 | Msa0970100 | 0.800876 | 1.173203e-48 | -8.615850e-47 |
Msa0506750 | Msa0976380 | 0.803514 | 3.361202e-49 | -8.615850e-47 |
Msa0506750 | Msa0981670 | 0.819770 | 9.752150e-53 | -8.615850e-47 |
Msa0506750 | Msa0982730 | 0.844102 | 9.306753e-59 | -8.615850e-47 |
Msa0506750 | Msa0998660 | -0.805025 | 1.629224e-49 | -8.615850e-47 |
Msa0506750 | Msa1008850 | 0.818132 | 2.299007e-52 | -8.615850e-47 |
Msa0506750 | Msa1014550 | -0.809439 | 1.891085e-50 | -8.615850e-47 |
Msa0506750 | Msa1022420 | 0.804974 | 1.669239e-49 | -8.615850e-47 |
Msa0506750 | Msa1025200 | 0.812419 | 4.280058e-51 | -8.615850e-47 |
Msa0506750 | Msa1026710 | 0.825626 | 4.231355e-54 | -8.615850e-47 |
Msa0506750 | Msa1029820 | 0.805210 | 1.490105e-49 | -8.615850e-47 |
Msa0506750 | Msa1029840 | 0.826209 | 3.075955e-54 | -8.615850e-47 |
Msa0506750 | Msa1041060 | 0.813599 | 2.359208e-51 | -8.615850e-47 |
Msa0506750 | Msa1042300 | 0.805338 | 1.401155e-49 | -8.615850e-47 |
Msa0506750 | Msa1050260 | 0.849893 | 2.413867e-60 | -8.615850e-47 |
Msa0506750 | Msa1056890 | 0.812969 | 3.243989e-51 | -8.615850e-47 |
Msa0506750 | Msa1068940 | 0.808382 | 3.182733e-50 | -8.615850e-47 |
Msa0506750 | Msa1072310 | 0.808788 | 2.607356e-50 | -8.615850e-47 |
Msa0506750 | Msa1093190 | -0.816379 | 5.702165e-52 | -8.615850e-47 |
Msa0506750 | Msa1111910 | 0.803534 | 3.330592e-49 | -8.615850e-47 |
Msa0506750 | Msa1115600 | 0.828639 | 8.041390e-55 | -8.615850e-47 |
Msa0506750 | Msa1118170 | 0.836747 | 7.807887e-57 | -8.615850e-47 |
Msa0506750 | Msa1124210 | 0.804853 | 1.769943e-49 | -8.615850e-47 |
Msa0506750 | Msa1132850 | 0.809595 | 1.750586e-50 | -8.615850e-47 |
Msa0506750 | Msa1149910 | 0.817026 | 4.082543e-52 | -8.615850e-47 |
Msa0506750 | Msa1156720 | 0.801005 | 1.104368e-48 | -8.615850e-47 |
Msa0506750 | Msa1156730 | 0.847550 | 1.076969e-59 | -8.615850e-47 |
Msa0506750 | Msa1165460 | 0.827228 | 1.756420e-54 | -8.615850e-47 |
Msa0506750 | Msa1183910 | 0.812985 | 3.218770e-51 | -8.615850e-47 |
Msa0506750 | Msa1184680 | 0.815060 | 1.121704e-51 | -8.615850e-47 |
Msa0506750 | Msa1191530 | -0.812680 | 3.752264e-51 | -8.615850e-47 |
Msa0506750 | Msa1197720 | 0.816659 | 4.935298e-52 | -8.615850e-47 |
Msa0506750 | Msa1199850 | 0.811506 | 6.767152e-51 | -8.615850e-47 |
Msa0506750 | Msa1201170 | 0.814842 | 1.254053e-51 | -8.615850e-47 |
Msa0506750 | Msa1205270 | -0.819142 | 1.356480e-52 | -8.615850e-47 |
Msa0506750 | Msa1206040 | 0.815495 | 8.978596e-52 | -8.615850e-47 |
Msa0506750 | Msa1217890 | 0.832752 | 7.901894e-56 | -8.615850e-47 |
Msa0506750 | Msa1220580 | 0.844325 | 8.108569e-59 | -8.615850e-47 |
Msa0506750 | Msa1226370 | 0.815036 | 1.135432e-51 | -8.615850e-47 |
Msa0506750 | Msa1252790 | 0.803594 | 3.235816e-49 | -8.615850e-47 |
Msa0506750 | Msa1255030 | -0.820100 | 8.196529e-53 | -8.615850e-47 |
Msa0506750 | Msa1266120 | -0.834014 | 3.829277e-56 | -8.615850e-47 |
Msa0506750 | Msa1273320 | 0.805852 | 1.092920e-49 | -8.615850e-47 |
Msa0506750 | Msa1279120 | 0.813279 | 2.773664e-51 | -8.615850e-47 |
Msa0506750 | Msa1286860 | -0.830157 | 3.439091e-55 | -8.615850e-47 |
Msa0506750 | Msa1294280 | 0.834951 | 2.226822e-56 | -8.615850e-47 |
Msa0506750 | Msa1295210 | -0.821403 | 4.113433e-53 | -8.615850e-47 |
Msa0506750 | Msa1295480 | -0.803724 | 3.041345e-49 | -8.615850e-47 |
Msa0506750 | Msa1297070 | 0.808713 | 2.705009e-50 | -8.615850e-47 |
Msa0506750 | Msa1297220 | -0.811967 | 5.371700e-51 | -8.615850e-47 |
Msa0506750 | Msa1315500 | 0.822550 | 2.231115e-53 | -8.615850e-47 |
Msa0506750 | Msa1323260 | -0.803391 | 3.564672e-49 | -8.615850e-47 |
Msa0506750 | Msa1328280 | 0.813752 | 2.182882e-51 | -8.615850e-47 |
Msa0506750 | Msa1328870 | 0.813573 | 2.390672e-51 | -8.615850e-47 |
Msa0506750 | Msa1334560 | 0.852334 | 4.943083e-61 | -8.615850e-47 |
Msa0506750 | Msa1334670 | 0.802870 | 4.569066e-49 | -8.615850e-47 |
Msa0506750 | Msa1342360 | -0.810698 | 1.012745e-50 | -8.615850e-47 |
Msa0506750 | Msa1342760 | 0.834829 | 2.389473e-56 | -8.615850e-47 |
Msa0506750 | Msa1343450 | -0.805303 | 1.424687e-49 | -8.615850e-47 |
Msa0506750 | Msa1347390 | 0.828445 | 8.954046e-55 | -8.615850e-47 |
Msa0506750 | Msa1352630 | -0.812255 | 4.647491e-51 | -8.615850e-47 |
Msa0506750 | Msa1361980 | 0.800946 | 1.135146e-48 | -8.615850e-47 |
Msa0506750 | Msa1366140 | -0.817362 | 3.429456e-52 | -8.615850e-47 |
Msa0506750 | Msa1368390 | 0.819012 | 1.451864e-52 | -8.615850e-47 |
Msa0506750 | Msa1371800 | 0.812014 | 5.245726e-51 | -8.615850e-47 |
Msa0506750 | Msa1376310 | 0.815748 | 7.884511e-52 | -8.615850e-47 |
Msa0506750 | Msa1386180 | -0.806912 | 6.533406e-50 | -8.615850e-47 |
Msa0506750 | Msa1387450 | -0.817427 | 3.317134e-52 | -8.615850e-47 |
Msa0506750 | Msa1387570 | 0.821061 | 4.931282e-53 | -8.615850e-47 |
Msa0506750 | Msa1389820 | 0.828355 | 9.416783e-55 | -8.615850e-47 |
Msa0506750 | Msa1396100 | 0.839277 | 1.744681e-57 | -8.615850e-47 |
Msa0506750 | Msa1402010 | 0.853311 | 2.598632e-61 | -8.615850e-47 |
Msa0506750 | Msa1405830 | 0.819082 | 1.399574e-52 | -8.615850e-47 |
Msa0506750 | Msa1407810 | 0.821864 | 3.218953e-53 | -8.615850e-47 |
Msa0506750 | Msa1413020 | 0.810473 | 1.132992e-50 | -8.615850e-47 |
Msa0506750 | Msa1413130 | 0.811274 | 7.600139e-51 | -8.615850e-47 |
Msa0506750 | Msa1416190 | 0.841943 | 3.496106e-58 | -8.615850e-47 |
Msa0506750 | Msa1421630 | 0.847063 | 1.465635e-59 | -8.615850e-47 |
Msa0506750 | Msa1428230 | -0.814472 | 1.514239e-51 | -8.615850e-47 |
Msa0506750 | Msa1433360 | 0.805125 | 1.552721e-49 | -8.615850e-47 |
Msa0506750 | Msa1436620 | 0.831947 | 1.249978e-55 | -8.615850e-47 |
Msa0506750 | Msa1437780 | 0.821139 | 4.731191e-53 | -8.615850e-47 |
Msa0506750 | Msa1438370 | 0.891422 | 4.029908e-74 | -8.615850e-47 |
Msa0506750 | Msa1452790 | -0.804089 | 2.553690e-49 | -8.615850e-47 |
Msa0506750 | Msa1457770 | 0.822987 | 1.764991e-53 | -8.615850e-47 |
Msa0506750 | Msa1461770 | 0.825616 | 4.254521e-54 | -8.615850e-47 |
Msa0506750 | Msa1462610 | 0.804824 | 1.794211e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0506750 | MtrunA17_Chr3g0144221 | 94.953 | 634 | 14 | 2 | 1 | 633 | 1 | 617 | 0.0 | 1226 |
Msa0506750 | MtrunA17_Chr1g0199651 | 52.183 | 481 | 210 | 3 | 4 | 483 | 8 | 469 | 1.16e-167 | 487 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0506750 | AT1G76400.1 | 66.502 | 609 | 186 | 2 | 25 | 633 | 24 | 614 | 0.0 | 833 |
Msa0506750 | AT1G76400.2 | 65.996 | 547 | 168 | 2 | 25 | 571 | 24 | 552 | 0.0 | 741 |
Msa0506750 | AT2G01720.1 | 51.158 | 475 | 205 | 5 | 14 | 482 | 10 | 463 | 3.62e-161 | 470 |
Find 161 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGACTTCTGCATCTTATT+TGG | 0.144569 | 3_4:+53408587 | Msa0506750:CDS |
CATCGTTGCGTGATCTTTCT+AGG | 0.176304 | 3_4:+53408783 | Msa0506750:CDS |
CTGGAAATGGTTGCAATATA+TGG | 0.199405 | 3_4:-53404415 | None:intergenic |
ACTGTCTAGAAGTATGTTTC+TGG | 0.210627 | 3_4:-53409513 | None:intergenic |
CGCTTCCTTAATATCTCTTT+TGG | 0.225268 | 3_4:+53405216 | Msa0506750:CDS |
GAGCCGTTAATGTTGATTTC+TGG | 0.228415 | 3_4:+53408507 | Msa0506750:CDS |
CAAGTAAAACAAGGTCAAAA+TGG | 0.248950 | 3_4:-53409272 | None:intergenic |
GTCAATCACCAAATCATTAA+TGG | 0.250801 | 3_4:-53405244 | None:intergenic |
CCACTTCAGGACTTCTTGTT+TGG | 0.252717 | 3_4:+53405180 | Msa0506750:CDS |
ACAAGAGATTTATGATCTTA+TGG | 0.256694 | 3_4:+53409194 | Msa0506750:CDS |
TCGCCCTTCCCAAGGCCTTT+AGG | 0.289486 | 3_4:-53404359 | None:intergenic |
TACTCTTGCGCCTGTATTGC+AGG | 0.289724 | 3_4:+53408449 | Msa0506750:CDS |
AAGGAAGAGGGAATATCTTT+AGG | 0.294373 | 3_4:-53404314 | None:intergenic |
TGTCTTTCTTTCACAGGAAA+TGG | 0.294905 | 3_4:-53405644 | None:intergenic |
CTGCTGCAGACTTGACTATC+AGG | 0.298525 | 3_4:+53404863 | Msa0506750:intron |
AAGTGCTTTACATGGTTATC+AGG | 0.308889 | 3_4:-53404206 | None:intergenic |
TGGATATGGGTTGCCACTTC+AGG | 0.311465 | 3_4:+53405167 | Msa0506750:CDS |
GCTGGAAAATACAAAACTTC+AGG | 0.319386 | 3_4:+53404568 | Msa0506750:CDS |
GGGAACCAAAAGAGATATTA+AGG | 0.322733 | 3_4:-53405221 | None:intergenic |
TGCTAAGGAGAGAGATTTGC+AGG | 0.327633 | 3_4:+53409059 | Msa0506750:CDS |
TCAATCACCAAATCATTAAT+GGG | 0.328904 | 3_4:-53405243 | None:intergenic |
TTTAGGGCGGACAACTTCAT+AGG | 0.340630 | 3_4:-53404297 | None:intergenic |
TGCAAATCTGCTGCAATTAC+CGG | 0.340964 | 3_4:+53403222 | Msa0506750:five_prime_UTR |
AGGGCTGATTATTCTCAAAA+TGG | 0.345796 | 3_4:-53404655 | None:intergenic |
CATATATATACACTAGAATA+AGG | 0.350488 | 3_4:+53409410 | Msa0506750:three_prime_UTR |
TATTTCCACTTCTAGTTTGT+GGG | 0.353054 | 3_4:+53404983 | Msa0506750:CDS |
GATTGTTATGAGAAGAAGTT+AGG | 0.359037 | 3_4:+53409114 | Msa0506750:CDS |
ATATTTCCACTTCTAGTTTG+TGG | 0.370550 | 3_4:+53404982 | Msa0506750:CDS |
GAGCATTATAATCTTGTTCA+TGG | 0.371780 | 3_4:+53404743 | Msa0506750:CDS |
TTCTCAAAATGGATAACAAT+TGG | 0.382836 | 3_4:-53404644 | None:intergenic |
CAGGGTGGTTTGACTTTAGT+AGG | 0.384720 | 3_4:+53408417 | Msa0506750:intron |
GTAACTTTACCTAAAGGCCT+TGG | 0.391130 | 3_4:+53404350 | Msa0506750:CDS |
CAGGGATCTGAATTGAAATA+TGG | 0.392730 | 3_4:+53404587 | Msa0506750:CDS |
CTGGTTCAGTGAGAGCGTTT+TGG | 0.397574 | 3_4:+53403250 | Msa0506750:five_prime_UTR |
AGATTTGCAGGAGAAGCTTA+TGG | 0.399523 | 3_4:+53409071 | Msa0506750:CDS |
TAAGAGGTGCATCTGCCTTT+AGG | 0.408931 | 3_4:+53404898 | Msa0506750:CDS |
AGGAAGAGGGAATATCTTTA+GGG | 0.416520 | 3_4:-53404313 | None:intergenic |
GGAAAGGCGAAATCATCTTC+TGG | 0.418481 | 3_4:+53404263 | Msa0506750:CDS |
GAGCTCATTCTGTTTACTAC+AGG | 0.418845 | 3_4:+53404946 | Msa0506750:CDS |
GATTGGACCTTCACGGGATA+AGG | 0.432111 | 3_4:-53404500 | None:intergenic |
GAGGAAGGGAAATTGAAAAT+CGG | 0.432426 | 3_4:+53409136 | Msa0506750:CDS |
ATGAGAAGAAGTTAGGAGGA+AGG | 0.433364 | 3_4:+53409121 | Msa0506750:CDS |
AAGCCAGAAATCAACATTAA+CGG | 0.434432 | 3_4:-53408510 | None:intergenic |
GGATGAGATCGGAGAGGACC+TGG | 0.435073 | 3_4:-53403376 | None:intergenic |
CCGCACCACTACCACTCTTA+AGG | 0.447901 | 3_4:+53403590 | Msa0506750:CDS |
GTAATTTAACATTGAGCGAT+TGG | 0.448219 | 3_4:-53404517 | None:intergenic |
ACCTCATGTCTTTCTTTCAC+AGG | 0.448961 | 3_4:-53405650 | None:intergenic |
GACTTCTTGTTTGGAGTCGA+TGG | 0.451851 | 3_4:+53405189 | Msa0506750:CDS |
TAACTTTACCTAAAGGCCTT+GGG | 0.455605 | 3_4:+53404351 | Msa0506750:CDS |
TTATAATAGACCTGCAATAC+AGG | 0.458777 | 3_4:-53408459 | None:intergenic |
GGTTCAAGCAACTATTCATC+AGG | 0.459505 | 3_4:+53408712 | Msa0506750:intron |
GTTTACTACAGGGATGAAAT+CGG | 0.459929 | 3_4:+53404957 | Msa0506750:CDS |
TATTCTGTAACTTTACCTAA+AGG | 0.460646 | 3_4:+53404344 | Msa0506750:CDS |
TTCTTCTCTAGCACGACAAC+AGG | 0.460738 | 3_4:-53405801 | None:intergenic |
AAATGATAAATTTATTGAAA+GGG | 0.462208 | 3_4:+53403143 | None:intergenic |
TCAACCGTCTTTCTATGCTC+AGG | 0.463333 | 3_4:+53408484 | Msa0506750:CDS |
GGAGATTGAGATATCCCATT+GGG | 0.465275 | 3_4:+53404703 | Msa0506750:CDS |
AGCAACGACTAATGATACTA+TGG | 0.470319 | 3_4:-53408736 | None:intergenic |
TAAAGATATTCCCTCTTCCT+TGG | 0.470995 | 3_4:+53404316 | Msa0506750:CDS |
TCTAGGACAGGTGATATTCA+AGG | 0.471596 | 3_4:+53408800 | Msa0506750:CDS |
TGGAAATGGTTGCAATATAT+GGG | 0.474469 | 3_4:-53404414 | None:intergenic |
TGAGAAGAAGTTAGGAGGAA+GGG | 0.475108 | 3_4:+53409122 | Msa0506750:CDS |
CTGGAAAATACAAAACTTCA+GGG | 0.476503 | 3_4:+53404569 | Msa0506750:CDS |
AAAATGATAAATTTATTGAA+AGG | 0.476699 | 3_4:+53403142 | None:intergenic |
AAGTAAAACAAGGTCAAAAT+GGG | 0.479563 | 3_4:-53409271 | None:intergenic |
AATGGAGGAAGATTCTCATA+TGG | 0.481992 | 3_4:-53404611 | None:intergenic |
GCGAAATCATCTTCTGGTGT+TGG | 0.483362 | 3_4:+53404269 | Msa0506750:CDS |
GCAGATGCACCTCTTACATA+TGG | 0.485700 | 3_4:-53404891 | None:intergenic |
GCTGCAATTACCGGGATCTC+TGG | 0.488390 | 3_4:+53403231 | Msa0506750:five_prime_UTR |
GGTAATATTTGAGCGGCTTG+TGG | 0.494892 | 3_4:-53408911 | None:intergenic |
ACTTACACGACGGTCAACTT+TGG | 0.499801 | 3_4:-53403402 | None:intergenic |
CTTATTTGGCAAAGATCCAA+TGG | 0.502030 | 3_4:+53408601 | Msa0506750:CDS |
CTTGGCAGTAAGACGCCTAA+AGG | 0.502523 | 3_4:-53404913 | None:intergenic |
TTGCGTGATCTTTCTAGGAC+AGG | 0.503122 | 3_4:+53408788 | Msa0506750:CDS |
CAAATAAGATGCAGAAGTCT+TGG | 0.505500 | 3_4:-53408586 | None:intergenic |
GAGCACCTTAAGAGTGGTAG+TGG | 0.506326 | 3_4:-53403595 | None:intergenic |
ATTGAGCGATTGGACCTTCA+CGG | 0.508824 | 3_4:-53404507 | None:intergenic |
AGTTGATTACCTCTTCCCAT+TGG | 0.512116 | 3_4:-53408617 | None:intergenic |
AATAGAGTCCTACACAAAGC+TGG | 0.512238 | 3_4:+53404550 | Msa0506750:CDS |
AGAATAAGTTGCCAAGGAAG+AGG | 0.516063 | 3_4:-53404327 | None:intergenic |
TGCACCTCTTACATATGGCC+TGG | 0.517740 | 3_4:-53404886 | None:intergenic |
TTGAGCGATTGGACCTTCAC+GGG | 0.522891 | 3_4:-53404506 | None:intergenic |
TAGGACTCTATTCTTGCCTC+AGG | 0.522970 | 3_4:-53404539 | None:intergenic |
GAGGACCTGGGAGGATAGAA+TGG | 0.523253 | 3_4:-53403363 | None:intergenic |
CAAAATGGATAACAATTGGC+AGG | 0.524969 | 3_4:-53404640 | None:intergenic |
ATGAGCTCTTGGTGGCAGCT+TGG | 0.525565 | 3_4:-53404931 | None:intergenic |
GAATAAGTTGCCAAGGAAGA+GGG | 0.531898 | 3_4:-53404326 | None:intergenic |
TTCACAGGAAATGGAACAGA+TGG | 0.535738 | 3_4:-53405635 | None:intergenic |
TAGTAAACAGAATGAGCTCT+TGG | 0.535990 | 3_4:-53404942 | None:intergenic |
CTTTCAGGTTGTCTTGCCAG+AGG | 0.536714 | 3_4:+53405595 | Msa0506750:intron |
ACAATTGGCAGGTATGAGAA+TGG | 0.537574 | 3_4:-53404629 | None:intergenic |
TTTCAGGTTGTCTTGCCAGA+GGG | 0.540711 | 3_4:+53405596 | Msa0506750:intron |
AACTCTTTAGCAACGGCGAA+GGG | 0.542494 | 3_4:-53404674 | None:intergenic |
TGATCTGTACATTGCCCCAA+TGG | 0.542650 | 3_4:-53404718 | None:intergenic |
TGAAAATGCTCATTATGCTC+AGG | 0.547728 | 3_4:-53405834 | None:intergenic |
TGTTATGAGAAGAAGTTAGG+AGG | 0.549117 | 3_4:+53409117 | Msa0506750:CDS |
CAGGCCAGGCCATATGTAAG+AGG | 0.549205 | 3_4:+53404882 | Msa0506750:CDS |
CACGACGGTCAACTTTGGTA+AGG | 0.549384 | 3_4:-53403397 | None:intergenic |
CTAGGACAGGTGATATTCAA+GGG | 0.554420 | 3_4:+53408801 | Msa0506750:CDS |
CTTCGCCGTTGCTAAAGAGT+TGG | 0.554612 | 3_4:+53404676 | Msa0506750:CDS |
TATTGAAAGGGTGCAAAGCA+TGG | 0.554839 | 3_4:+53403155 | Msa0506750:five_prime_UTR |
CAACCGTCTTTCTATGCTCA+GGG | 0.556453 | 3_4:+53408485 | Msa0506750:CDS |
TTACCTAAAGGCCTTGGGAA+GGG | 0.556651 | 3_4:+53404356 | Msa0506750:CDS |
GCAAATCTGCTGCAATTACC+GGG | 0.557395 | 3_4:+53403223 | Msa0506750:five_prime_UTR |
TCAAACTTTCGCCCTTCCCA+AGG | 0.557699 | 3_4:-53404367 | None:intergenic |
GTCACCCCACAAACTAGAAG+TGG | 0.557838 | 3_4:-53404988 | None:intergenic |
TTATTTGGCAAAGATCCAAT+GGG | 0.565258 | 3_4:+53408602 | Msa0506750:CDS |
CTTTACATGGTTATCAGGAA+AGG | 0.566975 | 3_4:-53404201 | None:intergenic |
AGCAACACTTAACGAAGGAA+AGG | 0.568080 | 3_4:+53404241 | Msa0506750:CDS |
TGTATGCTAAGTGCTTTACA+TGG | 0.568391 | 3_4:-53404214 | None:intergenic |
ATTTCCACTTCTAGTTTGTG+GGG | 0.568670 | 3_4:+53404984 | Msa0506750:CDS |
GGCAAAGATCCAATGGGAAG+AGG | 0.571287 | 3_4:+53408608 | Msa0506750:CDS |
TTAGGGCGGACAACTTCATA+GGG | 0.576553 | 3_4:-53404296 | None:intergenic |
GCAGACTTGACTATCAGGCC+AGG | 0.579305 | 3_4:+53404868 | Msa0506750:intron |
GCAACACTTAACGAAGGAAA+GGG | 0.580045 | 3_4:+53404242 | Msa0506750:CDS |
GAAGGGCGAAAGTTTGACGT+TGG | 0.580960 | 3_4:+53404373 | Msa0506750:CDS |
GTGTCGCAGGTAGAGAATGC+AGG | 0.581081 | 3_4:+53404149 | Msa0506750:intron |
TCTTTCTCCTTATCCCGTGA+AGG | 0.581200 | 3_4:+53404493 | Msa0506750:CDS |
TTTACCTAAAGGCCTTGGGA+AGG | 0.581516 | 3_4:+53404355 | Msa0506750:CDS |
CAATCACCAAATCATTAATG+GGG | 0.584647 | 3_4:-53405242 | None:intergenic |
GACCTTGGGTAATATTTGAG+CGG | 0.585756 | 3_4:-53408918 | None:intergenic |
AGTTACAGAATAAGTTGCCA+AGG | 0.586321 | 3_4:-53404333 | None:intergenic |
TAAACAGAATGAGCTCTTGG+TGG | 0.587661 | 3_4:-53404939 | None:intergenic |
CCAAACAAGAAGTCCTGAAG+TGG | 0.588215 | 3_4:-53405180 | None:intergenic |
ATTTACCATTCTATCCTCCC+AGG | 0.591306 | 3_4:+53403358 | Msa0506750:CDS |
TCTCACTGAACCAGAGATCC+CGG | 0.591331 | 3_4:-53403241 | None:intergenic |
AACTTTGAGCACCTTAAGAG+TGG | 0.594308 | 3_4:-53403601 | None:intergenic |
CCGTTGCTAAAGAGTTGGTG+AGG | 0.595956 | 3_4:+53404681 | Msa0506750:CDS |
CAACTCTTTAGCAACGGCGA+AGG | 0.602379 | 3_4:-53404675 | None:intergenic |
AACTTTGGTAAGGATGAGAT+CGG | 0.602673 | 3_4:-53403387 | None:intergenic |
CATGGCGGTGCTCAGAGCAA+AGG | 0.603405 | 3_4:+53404761 | Msa0506750:CDS |
GATGAGATCGGAGAGGACCT+GGG | 0.604322 | 3_4:-53403375 | None:intergenic |
AGCTCATTCTGTTTACTACA+GGG | 0.610364 | 3_4:+53404947 | Msa0506750:CDS |
GTCTGCATGCATGTAGACAA+TGG | 0.610818 | 3_4:-53408553 | None:intergenic |
AACATTCGAACAAGAAACAA+AGG | 0.611122 | 3_4:+53403179 | Msa0506750:five_prime_UTR |
GATTGACACTCTTGTTGTGA+AGG | 0.615337 | 3_4:+53405260 | Msa0506750:CDS |
GGTGGAGGAAGTAATTGCTA+AGG | 0.617368 | 3_4:+53409044 | Msa0506750:intron |
GATCTGTACATTGCCCCAAT+GGG | 0.625357 | 3_4:-53404717 | None:intergenic |
ATTTCATGATGACGATGATG+AGG | 0.626481 | 3_4:+53403306 | Msa0506750:exon |
AAGTGGCAACCCATATCCAA+TGG | 0.630677 | 3_4:-53405163 | None:intergenic |
GGGAGATTGAGATATCCCAT+TGG | 0.633387 | 3_4:+53404702 | Msa0506750:CDS |
AGCCGCTCAAATATTACCCA+AGG | 0.639940 | 3_4:+53408916 | Msa0506750:CDS |
CGTTGCTAAAGAGTTGGTGA+GGG | 0.643300 | 3_4:+53404682 | Msa0506750:CDS |
ACTTAACGAAGGAAAGGGAA+AGG | 0.652066 | 3_4:+53404247 | Msa0506750:CDS |
TCCTGTGAAAGAAAGACATG+AGG | 0.667785 | 3_4:+53405649 | Msa0506750:CDS |
GCTCCCTGAGCATAGAAAGA+CGG | 0.670119 | 3_4:-53408488 | None:intergenic |
GCTCAATGTTAAATTACCTG+AGG | 0.670175 | 3_4:+53404523 | Msa0506750:CDS |
AATCACCAAATCATTAATGG+GGG | 0.672170 | 3_4:-53405241 | None:intergenic |
CCTCACCAACTCTTTAGCAA+CGG | 0.676013 | 3_4:-53404681 | None:intergenic |
CCTTAAGAGTGGTAGTGGTG+CGG | 0.677361 | 3_4:-53403590 | None:intergenic |
GAACTAAATCAAGTAAAACA+AGG | 0.678884 | 3_4:-53409281 | None:intergenic |
ATTGGCAGGTATGAGAATGG+AGG | 0.680768 | 3_4:-53404626 | None:intergenic |
AAGAGGGAATATCTTTAGGG+CGG | 0.682262 | 3_4:-53404310 | None:intergenic |
ATGTCAGCAACACTTAACGA+AGG | 0.697211 | 3_4:+53404236 | Msa0506750:CDS |
CTCGTTGAAAGAGCTCACAA+AGG | 0.716021 | 3_4:+53408853 | Msa0506750:CDS |
CATTATAATCTTGTTCATGG+CGG | 0.724346 | 3_4:+53404746 | Msa0506750:CDS |
CAGAACTTGAGATCGAACCT+CGG | 0.724721 | 3_4:+53405106 | Msa0506750:CDS |
GAGATTGAGATATCCCATTG+GGG | 0.726808 | 3_4:+53404704 | Msa0506750:CDS |
TGGTAAGGATGAGATCGGAG+AGG | 0.732813 | 3_4:-53403382 | None:intergenic |
GAGATCGGAGAGGACCTGGG+AGG | 0.742940 | 3_4:-53403372 | None:intergenic |
TGCATGCATGTAGACAATGG+AGG | 0.747749 | 3_4:-53408550 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTTGTG+TGG | + | chr3_4:53403640-53403659 | Msa0506750:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTTGTGT+GGG | + | chr3_4:53403641-53403660 | Msa0506750:intron | 10.0% |
!!! | AAAAATTCATTTTATATTGT+TGG | - | chr3_4:53405919-53405938 | None:intergenic | 10.0% |
!!! | AAATTATTTTCCATTTTTTA+TGG | - | chr3_4:53407097-53407116 | None:intergenic | 10.0% |
!!! | TTATTTTATTTTTGTTTTTC+AGG | + | chr3_4:53409023-53409042 | Msa0506750:intron | 10.0% |
!!! | AAAGTTAAATTACAAAGTTT+TGG | - | chr3_4:53403691-53403710 | None:intergenic | 15.0% |
!! | AAGAATAATAAATGTTGTAT+TGG | + | chr3_4:53406158-53406177 | Msa0506750:intron | 15.0% |
!!! | AAATAATTTGAAATTTTTGC+TGG | + | chr3_4:53407108-53407127 | Msa0506750:intron | 15.0% |
!!! | ATATGATATTTGAAGTATTT+TGG | - | chr3_4:53406712-53406731 | None:intergenic | 15.0% |
!!! | TTCAAGATACTTTTTTTTTT+TGG | + | chr3_4:53407422-53407441 | Msa0506750:intron | 15.0% |
!!! | ACAATTAGGTTATTTTATAT+CGG | - | chr3_4:53408249-53408268 | None:intergenic | 15.0% |
!!! | TTTTTTTTGTACAAACAATT+AGG | - | chr3_4:53408263-53408282 | None:intergenic | 15.0% |
!! | AGAATTGAAAAATCTTAGAT+CGG | - | chr3_4:53403470-53403489 | None:intergenic | 20.0% |
!!! | TGAACTTTAGTTTAAAAACT+TGG | + | chr3_4:53403945-53403964 | Msa0506750:intron | 20.0% |
!! | AAGAAAGTAAAATTATGTGT+TGG | - | chr3_4:53405308-53405327 | None:intergenic | 20.0% |
!!! | AATTCATTTTATATTGTTGG+TGG | - | chr3_4:53405916-53405935 | None:intergenic | 20.0% |
!! | TCTTAAAAATAAGATGTTTG+TGG | - | chr3_4:53405955-53405974 | None:intergenic | 20.0% |
!! | CCACTAACTATAATTAATAA+GGG | - | chr3_4:53406091-53406110 | None:intergenic | 20.0% |
!! | TCCACTAACTATAATTAATA+AGG | - | chr3_4:53406092-53406111 | None:intergenic | 20.0% |
!! | TGATTGAAATGCAATAAATA+AGG | + | chr3_4:53406121-53406140 | Msa0506750:intron | 20.0% |
!! | GATTGAAATGCAATAAATAA+GGG | + | chr3_4:53406122-53406141 | Msa0506750:intron | 20.0% |
!!! | AATAAATAAGGGTATGTTAA+TGG | + | chr3_4:53406133-53406152 | Msa0506750:intron | 20.0% |
!!! | TACTGGTTTTATTATTGAAT+TGG | + | chr3_4:53406307-53406326 | Msa0506750:intron | 20.0% |
!!! | ACTGGTTTTATTATTGAATT+GGG | + | chr3_4:53406308-53406327 | Msa0506750:intron | 20.0% |
!! | AGCTTGAAAATAGTTTATAA+TGG | + | chr3_4:53406409-53406428 | Msa0506750:intron | 20.0% |
!!! | GTTTGATTTTGATTGAATTA+AGG | - | chr3_4:53406794-53406813 | None:intergenic | 20.0% |
!! | CAAAACTATTGAATACAAAA+TGG | + | chr3_4:53406964-53406983 | Msa0506750:intron | 20.0% |
!!! | GTTTGATTTTGATTGAATTA+AGG | - | chr3_4:53406794-53406813 | None:intergenic | 20.0% |
!! | TTGTAACATTCCAATTAAAT+TGG | - | chr3_4:53407815-53407834 | None:intergenic | 20.0% |
!!! | AAAAACCCTTTTTTTTACAT+GGG | - | chr3_4:53407917-53407936 | None:intergenic | 20.0% |
!!! | AAAAAACCCTTTTTTTTACA+TGG | - | chr3_4:53407918-53407937 | None:intergenic | 20.0% |
!!! | CAATTAGGTTATTTTATATC+GGG | - | chr3_4:53408248-53408267 | None:intergenic | 20.0% |
!!! | CTTTTAAAATGTGAACAATT+AGG | - | chr3_4:53408289-53408308 | None:intergenic | 20.0% |
!!! | ATTTGATTACTTTTTGTACA+GGG | + | chr3_4:53408399-53408418 | Msa0506750:intron | 20.0% |
!!! | TTTTATTTTTGTTTTTCAGG+TGG | + | chr3_4:53409026-53409045 | Msa0506750:intron | 20.0% |
!!! | TTTAGTTCAGAAATTTTTAG+CGG | + | chr3_4:53409296-53409315 | Msa0506750:three_prime_UTR | 20.0% |
!! | CATATATATACACTAGAATA+AGG | + | chr3_4:53409410-53409429 | Msa0506750:three_prime_UTR | 20.0% |
!! | AAGTCTTCATTTCATCTTTT+AGG | + | chr3_4:53403421-53403440 | Msa0506750:intron | 25.0% |
!! | AGTCTTCATTTCATCTTTTA+GGG | + | chr3_4:53403422-53403441 | Msa0506750:intron | 25.0% |
! | TAATTAGTATTTATCGATGC+TGG | + | chr3_4:53403489-53403508 | Msa0506750:intron | 25.0% |
!!! | TTTTTTTTTTTTTGTGTGGG+TGG | + | chr3_4:53403644-53403663 | Msa0506750:intron | 25.0% |
!!! | TTTTTTTTTTTTGTGTGGGT+GGG | + | chr3_4:53403645-53403664 | Msa0506750:intron | 25.0% |
!! | TGTCATTGTATTTTATCATG+TGG | - | chr3_4:53403881-53403900 | None:intergenic | 25.0% |
! | ACATGATAAAATACAATGAC+AGG | + | chr3_4:53403880-53403899 | Msa0506750:intron | 25.0% |
! | CATGATAAAATACAATGACA+GGG | + | chr3_4:53403881-53403900 | Msa0506750:intron | 25.0% |
! | TATTCTGTAACTTTACCTAA+AGG | + | chr3_4:53404344-53404363 | Msa0506750:CDS | 25.0% |
! | TTCTCAAAATGGATAACAAT+TGG | - | chr3_4:53404647-53404666 | None:intergenic | 25.0% |
! | TCAATCACCAAATCATTAAT+GGG | - | chr3_4:53405246-53405265 | None:intergenic | 25.0% |
!!! | TCATTATTTTGTTGCAAACT+TGG | + | chr3_4:53405336-53405355 | Msa0506750:intron | 25.0% |
!!! | TTTACCTGTATATTTTTCAG+AGG | + | chr3_4:53405407-53405426 | Msa0506750:intron | 25.0% |
! | ACATAGATATCTATCATCTA+TGG | - | chr3_4:53405702-53405721 | None:intergenic | 25.0% |
!!! | TATTACTGTTGCATCTTTTT+TGG | + | chr3_4:53405859-53405878 | Msa0506750:intron | 25.0% |
! | CCCTTATTAATTATAGTTAG+TGG | + | chr3_4:53406088-53406107 | Msa0506750:intron | 25.0% |
!! | TGTTGTATTGGTATTGTAAA+AGG | + | chr3_4:53406170-53406189 | Msa0506750:intron | 25.0% |
!! | GTTGTATTGGTATTGTAAAA+GGG | + | chr3_4:53406171-53406190 | Msa0506750:intron | 25.0% |
!! | TTTGCAGTTTTCTTTTCTAT+TGG | + | chr3_4:53406353-53406372 | Msa0506750:intron | 25.0% |
!! | CTCTTTTCATTATGAAACTT+AGG | - | chr3_4:53406385-53406404 | None:intergenic | 25.0% |
!!! | CCAGATTAGATTTTTTACAT+TGG | - | chr3_4:53406478-53406497 | None:intergenic | 25.0% |
! | CCAATGTAAAAAATCTAATC+TGG | + | chr3_4:53406475-53406494 | Msa0506750:intron | 25.0% |
! | TTGTAACCTACCATTTAATT+TGG | - | chr3_4:53406942-53406961 | None:intergenic | 25.0% |
! | TTGTAGGATACTAGATTTAT+TGG | + | chr3_4:53407181-53407200 | Msa0506750:intron | 25.0% |
! | TGTAGGATACTAGATTTATT+GGG | + | chr3_4:53407182-53407201 | Msa0506750:intron | 25.0% |
! | ACATTGCATTATTATATGCA+GGG | - | chr3_4:53407519-53407538 | None:intergenic | 25.0% |
! | AAACATAACTCCAAATTCTA+AGG | + | chr3_4:53407645-53407664 | Msa0506750:intron | 25.0% |
! | AACATAACTCCAAATTCTAA+GGG | + | chr3_4:53407646-53407665 | Msa0506750:intron | 25.0% |
! | GTAAGATACTAGATTGAATT+GGG | + | chr3_4:53407997-53408016 | Msa0506750:intron | 25.0% |
!! | GCTCTTTATAAACTATTTTC+AGG | - | chr3_4:53408180-53408199 | None:intergenic | 25.0% |
!!! | GATTTGATTACTTTTTGTAC+AGG | + | chr3_4:53408398-53408417 | Msa0506750:intron | 25.0% |
! | TCTTTACTTGCAAATGATTA+TGG | + | chr3_4:53408656-53408675 | Msa0506750:intron | 25.0% |
! | TATGGAACTATAAATCAAGA+GGG | - | chr3_4:53409002-53409021 | None:intergenic | 25.0% |
! | TTATGGAACTATAAATCAAG+AGG | - | chr3_4:53409003-53409022 | None:intergenic | 25.0% |
! | ACAAGAGATTTATGATCTTA+TGG | + | chr3_4:53409194-53409213 | Msa0506750:CDS | 25.0% |
! | AAGTAAAACAAGGTCAAAAT+GGG | - | chr3_4:53409274-53409293 | None:intergenic | 25.0% |
! | GAACTAAATCAAGTAAAACA+AGG | - | chr3_4:53409284-53409303 | None:intergenic | 25.0% |
!!! | CAAAGTTTTTAAGAAATGAG+GGG | - | chr3_4:53409486-53409505 | None:intergenic | 25.0% |
!!! | GCAAAGTTTTTAAGAAATGA+GGG | - | chr3_4:53409487-53409506 | None:intergenic | 25.0% |
!!! | AGCAAAGTTTTTAAGAAATG+AGG | - | chr3_4:53409488-53409507 | None:intergenic | 25.0% |
AACATTCGAACAAGAAACAA+AGG | + | chr3_4:53403179-53403198 | Msa0506750:five_prime_UTR | 30.0% | |
AGATCAATCTGCAAACAATA+GGG | - | chr3_4:53403555-53403574 | None:intergenic | 30.0% | |
GCATCAAAGGAAATAAGATA+AGG | - | chr3_4:53404093-53404112 | None:intergenic | 30.0% | |
TGGAAATGGTTGCAATATAT+GGG | - | chr3_4:53404417-53404436 | None:intergenic | 30.0% | |
GTAATTTAACATTGAGCGAT+TGG | - | chr3_4:53404520-53404539 | None:intergenic | 30.0% | |
CTGGAAAATACAAAACTTCA+GGG | + | chr3_4:53404569-53404588 | Msa0506750:CDS | 30.0% | |
GAGCATTATAATCTTGTTCA+TGG | + | chr3_4:53404743-53404762 | Msa0506750:CDS | 30.0% | |
CATTATAATCTTGTTCATGG+CGG | + | chr3_4:53404746-53404765 | Msa0506750:CDS | 30.0% | |
AATTCAGAATCACAGAAACA+AGG | - | chr3_4:53404803-53404822 | None:intergenic | 30.0% | |
!! | ATATTTCCACTTCTAGTTTG+TGG | + | chr3_4:53404982-53405001 | Msa0506750:CDS | 30.0% |
!! | TATTTCCACTTCTAGTTTGT+GGG | + | chr3_4:53404983-53405002 | Msa0506750:CDS | 30.0% |
AATCACCAAATCATTAATGG+GGG | - | chr3_4:53405244-53405263 | None:intergenic | 30.0% | |
CAATCACCAAATCATTAATG+GGG | - | chr3_4:53405245-53405264 | None:intergenic | 30.0% | |
GTCAATCACCAAATCATTAA+TGG | - | chr3_4:53405247-53405266 | None:intergenic | 30.0% | |
! | AGTTCCTCTGAAAAATATAC+AGG | - | chr3_4:53405414-53405433 | None:intergenic | 30.0% |
!!! | TTTTTCCTGCTTTTTGTCAT+TGG | + | chr3_4:53405510-53405529 | Msa0506750:intron | 30.0% |
GTCATTGTAGTATATTGTGT+AGG | + | chr3_4:53405538-53405557 | Msa0506750:intron | 30.0% | |
AGATATCTATCATCTATGGT+TGG | - | chr3_4:53405698-53405717 | None:intergenic | 30.0% | |
ATCTATGTCATTCCATTGTT+TGG | + | chr3_4:53405714-53405733 | Msa0506750:intron | 30.0% | |
TCTATGTCATTCCATTGTTT+GGG | + | chr3_4:53405715-53405734 | Msa0506750:intron | 30.0% | |
CTTTGTCTGCAACAATTATA+TGG | - | chr3_4:53405754-53405773 | None:intergenic | 30.0% | |
ATATCCTGAATTTCATGTAC+TGG | + | chr3_4:53406290-53406309 | Msa0506750:intron | 30.0% | |
AAAACCAGTACATGAAATTC+AGG | - | chr3_4:53406297-53406316 | None:intergenic | 30.0% | |
TGAAAGTTGAAAATAAGCCT+AGG | - | chr3_4:53406572-53406591 | None:intergenic | 30.0% | |
TTGTAACCAACCAGTTAATT+TGG | - | chr3_4:53406907-53406926 | None:intergenic | 30.0% | |
CAAAACAGCTCCAAATTAAA+TGG | + | chr3_4:53406929-53406948 | Msa0506750:intron | 30.0% | |
TTCAAATGTCACAGTATTGT+AGG | + | chr3_4:53407165-53407184 | Msa0506750:intron | 30.0% | |
TGATACACGATTCAAAAAAG+TGG | - | chr3_4:53407322-53407341 | None:intergenic | 30.0% | |
ACCTTATAAGGTGAATAAGT+GGG | + | chr3_4:53407470-53407489 | Msa0506750:intron | 30.0% | |
CATTGCATTATTATATGCAG+GGG | - | chr3_4:53407518-53407537 | None:intergenic | 30.0% | |
GACATTGCATTATTATATGC+AGG | - | chr3_4:53407520-53407539 | None:intergenic | 30.0% | |
GGGAATAGTTCCAATTTAAT+TGG | + | chr3_4:53407802-53407821 | Msa0506750:intron | 30.0% | |
GTTGACCCTATAATATTTGA+CGG | + | chr3_4:53407859-53407878 | Msa0506750:intron | 30.0% | |
TTGACCCTATAATATTTGAC+GGG | + | chr3_4:53407860-53407879 | Msa0506750:intron | 30.0% | |
!!! | AAAAAAAGGGTTTTTTCTGC+CGG | + | chr3_4:53407922-53407941 | Msa0506750:intron | 30.0% |
CGTAAGATACTAGATTGAAT+TGG | + | chr3_4:53407996-53408015 | Msa0506750:intron | 30.0% | |
TAGATTGAATTGGGATACAT+GGG | + | chr3_4:53408006-53408025 | Msa0506750:intron | 30.0% | |
TCTAACCTTCATACTTAGAT+GGG | - | chr3_4:53408340-53408359 | None:intergenic | 30.0% | |
ATCTAACCTTCATACTTAGA+TGG | - | chr3_4:53408341-53408360 | None:intergenic | 30.0% | |
TTATAATAGACCTGCAATAC+AGG | - | chr3_4:53408462-53408481 | None:intergenic | 30.0% | |
AAGCCAGAAATCAACATTAA+CGG | - | chr3_4:53408513-53408532 | None:intergenic | 30.0% | |
TTATTTGGCAAAGATCCAAT+GGG | + | chr3_4:53408602-53408621 | Msa0506750:CDS | 30.0% | |
!! | ACACTTTTGTTTCATCATTC+AGG | + | chr3_4:53408691-53408710 | Msa0506750:intron | 30.0% |
! | AATATTACCCAAGGTCATTT+TGG | + | chr3_4:53408925-53408944 | Msa0506750:intron | 30.0% |
! | ATCAAGAGGGAAATTTTATG+TGG | - | chr3_4:53408989-53409008 | None:intergenic | 30.0% |
!!! | TATTTTTGTTTTTCAGGTGG+AGG | + | chr3_4:53409029-53409048 | Msa0506750:intron | 30.0% |
GATTGTTATGAGAAGAAGTT+AGG | + | chr3_4:53409114-53409133 | Msa0506750:CDS | 30.0% | |
CAAGTAAAACAAGGTCAAAA+TGG | - | chr3_4:53409275-53409294 | None:intergenic | 30.0% | |
! | ATTTCATGATGACGATGATG+AGG | + | chr3_4:53403306-53403325 | Msa0506750:exon | 35.0% |
AACTTTGGTAAGGATGAGAT+CGG | - | chr3_4:53403390-53403409 | None:intergenic | 35.0% | |
TGAAATGAAGACTTACACGA+CGG | - | chr3_4:53403415-53403434 | None:intergenic | 35.0% | |
TGCAAACAATAGGGAAACAA+TGG | - | chr3_4:53403546-53403565 | None:intergenic | 35.0% | |
CAGATCAATCTGCAAACAAT+AGG | - | chr3_4:53403556-53403575 | None:intergenic | 35.0% | |
AAGTTCTGTAGACAACAACA+TGG | - | chr3_4:53403837-53403856 | None:intergenic | 35.0% | |
TTCATACTTGTGCAAATGAG+AGG | + | chr3_4:53404001-53404020 | Msa0506750:intron | 35.0% | |
GAGCAATTACATTTAGCAAG+TGG | - | chr3_4:53404062-53404081 | None:intergenic | 35.0% | |
AAAGTAAATCGCAGCATCAA+AGG | - | chr3_4:53404106-53404125 | None:intergenic | 35.0% | |
CTTTACATGGTTATCAGGAA+AGG | - | chr3_4:53404204-53404223 | None:intergenic | 35.0% | |
AAGTGCTTTACATGGTTATC+AGG | - | chr3_4:53404209-53404228 | None:intergenic | 35.0% | |
TGTATGCTAAGTGCTTTACA+TGG | - | chr3_4:53404217-53404236 | None:intergenic | 35.0% | |
AGGAAGAGGGAATATCTTTA+GGG | - | chr3_4:53404316-53404335 | None:intergenic | 35.0% | |
AAGGAAGAGGGAATATCTTT+AGG | - | chr3_4:53404317-53404336 | None:intergenic | 35.0% | |
TAAAGATATTCCCTCTTCCT+TGG | + | chr3_4:53404316-53404335 | Msa0506750:CDS | 35.0% | |
AGTTACAGAATAAGTTGCCA+AGG | - | chr3_4:53404336-53404355 | None:intergenic | 35.0% | |
TAACTTTACCTAAAGGCCTT+GGG | + | chr3_4:53404351-53404370 | Msa0506750:CDS | 35.0% | |
CTGGAAATGGTTGCAATATA+TGG | - | chr3_4:53404418-53404437 | None:intergenic | 35.0% | |
!! | TGCGTAATTTTCTCTGGAAA+TGG | - | chr3_4:53404431-53404450 | None:intergenic | 35.0% |
GCTCAATGTTAAATTACCTG+AGG | + | chr3_4:53404523-53404542 | Msa0506750:CDS | 35.0% | |
!! | TGTATTTTCCAGCTTTGTGT+AGG | - | chr3_4:53404561-53404580 | None:intergenic | 35.0% |
GCTGGAAAATACAAAACTTC+AGG | + | chr3_4:53404568-53404587 | Msa0506750:CDS | 35.0% | |
CAGGGATCTGAATTGAAATA+TGG | + | chr3_4:53404587-53404606 | Msa0506750:CDS | 35.0% | |
AATGGAGGAAGATTCTCATA+TGG | - | chr3_4:53404614-53404633 | None:intergenic | 35.0% | |
CAAAATGGATAACAATTGGC+AGG | - | chr3_4:53404643-53404662 | None:intergenic | 35.0% | |
AGGGCTGATTATTCTCAAAA+TGG | - | chr3_4:53404658-53404677 | None:intergenic | 35.0% | |
TAGTAAACAGAATGAGCTCT+TGG | - | chr3_4:53404945-53404964 | None:intergenic | 35.0% | |
AGCTCATTCTGTTTACTACA+GGG | + | chr3_4:53404947-53404966 | Msa0506750:CDS | 35.0% | |
GTTTACTACAGGGATGAAAT+CGG | + | chr3_4:53404957-53404976 | Msa0506750:CDS | 35.0% | |
!! | ATTTCCACTTCTAGTTTGTG+GGG | + | chr3_4:53404984-53405003 | Msa0506750:CDS | 35.0% |
!! | TGGAAAACTGCTTTTACCAT+TGG | + | chr3_4:53405147-53405166 | Msa0506750:CDS | 35.0% |
!! | ACTGCTTTTACCATTGGATA+TGG | + | chr3_4:53405153-53405172 | Msa0506750:CDS | 35.0% |
!! | CTGCTTTTACCATTGGATAT+GGG | + | chr3_4:53405154-53405173 | Msa0506750:CDS | 35.0% |
! | CGCTTCCTTAATATCTCTTT+TGG | + | chr3_4:53405216-53405235 | Msa0506750:CDS | 35.0% |
GGGAACCAAAAGAGATATTA+AGG | - | chr3_4:53405224-53405243 | None:intergenic | 35.0% | |
CAAACTTGGAATGCAATCTT+TGG | + | chr3_4:53405350-53405369 | Msa0506750:intron | 35.0% | |
! | AGGAACTAGAAGTATAGTAC+AGG | + | chr3_4:53405427-53405446 | Msa0506750:intron | 35.0% |
AACAACCAATGACAAAAAGC+AGG | - | chr3_4:53405518-53405537 | None:intergenic | 35.0% | |
TGACTTACTAATACATCTGC+CGG | + | chr3_4:53405563-53405582 | Msa0506750:intron | 35.0% | |
! | GAAATATCTTTTGAACCCTC+TGG | - | chr3_4:53405614-53405633 | None:intergenic | 35.0% |
TGTCTTTCTTTCACAGGAAA+TGG | - | chr3_4:53405647-53405666 | None:intergenic | 35.0% | |
GGACTATAAAACCCAAACAA+TGG | - | chr3_4:53405729-53405748 | None:intergenic | 35.0% | |
GTCTGCAACAATTATATGGA+TGG | - | chr3_4:53405750-53405769 | None:intergenic | 35.0% | |
! | TTTTCACACTTGGATATTGC+TGG | + | chr3_4:53405774-53405793 | Msa0506750:CDS | 35.0% |
TGAAAATGCTCATTATGCTC+AGG | - | chr3_4:53405837-53405856 | None:intergenic | 35.0% | |
! | TGAGCATAATGAGCATTTTC+AGG | + | chr3_4:53405836-53405855 | Msa0506750:CDS | 35.0% |
!!! | TACTGTTGCATCTTTTTTGG+AGG | + | chr3_4:53405862-53405881 | Msa0506750:intron | 35.0% |
!!! | CATTTTATATTGTTGGTGGC+TGG | - | chr3_4:53405912-53405931 | None:intergenic | 35.0% |
!!! | TGTCCCTTTTGAGTTTTACA+CGG | + | chr3_4:53406002-53406021 | Msa0506750:intron | 35.0% |
TACCCGTGTAAAACTCAAAA+GGG | - | chr3_4:53406008-53406027 | None:intergenic | 35.0% | |
ATACCCGTGTAAAACTCAAA+AGG | - | chr3_4:53406009-53406028 | None:intergenic | 35.0% | |
GTTAGTGTCCTGAATTTGTA+AGG | + | chr3_4:53406256-53406275 | Msa0506750:intron | 35.0% | |
ATTTCCCTCCTTACAAATTC+AGG | - | chr3_4:53406267-53406286 | None:intergenic | 35.0% | |
TGTGATCATGGTAGTCAAAT+TGG | + | chr3_4:53406620-53406639 | Msa0506750:intron | 35.0% | |
GTGATCATGGTAGTCAAATT+GGG | + | chr3_4:53406621-53406640 | Msa0506750:intron | 35.0% | |
ACTCACCTTCTATTCCTTTA+CGG | - | chr3_4:53406867-53406886 | None:intergenic | 35.0% | |
ATAGCTCCAAATTAACTGGT+TGG | + | chr3_4:53406898-53406917 | Msa0506750:intron | 35.0% | |
ACAGCTCCAAATTAAATGGT+AGG | + | chr3_4:53406933-53406952 | Msa0506750:intron | 35.0% | |
!!! | CATTTTTTATGGAACAGTCC+TGG | - | chr3_4:53407086-53407105 | None:intergenic | 35.0% |
CAGGACTGTTCCATAAAAAA+TGG | + | chr3_4:53407084-53407103 | Msa0506750:intron | 35.0% | |
ATTTATTGGGATATGCATCG+TGG | + | chr3_4:53407195-53407214 | Msa0506750:intron | 35.0% | |
TTTATTGGGATATGCATCGT+GGG | + | chr3_4:53407196-53407215 | Msa0506750:intron | 35.0% | |
AAAAAGTGGTTGAACGATAC+AGG | - | chr3_4:53407308-53407327 | None:intergenic | 35.0% | |
TGGCTAGAATTCACCTTATA+AGG | + | chr3_4:53407458-53407477 | Msa0506750:intron | 35.0% | |
CACCTTATAAGGTGAATAAG+TGG | + | chr3_4:53407469-53407488 | Msa0506750:intron | 35.0% | |
CCTTATAAGGTGAATAAGTG+GGG | + | chr3_4:53407471-53407490 | Msa0506750:intron | 35.0% | |
! | ACTTCCTCTTTTTCTCTCTA+CGG | - | chr3_4:53407744-53407763 | None:intergenic | 35.0% |
GTGACCCGTCAAATATTATA+GGG | - | chr3_4:53407867-53407886 | None:intergenic | 35.0% | |
TGTGACCCGTCAAATATTAT+AGG | - | chr3_4:53407868-53407887 | None:intergenic | 35.0% | |
TACCGACCCATGTAAAAAAA+AGG | + | chr3_4:53407908-53407927 | Msa0506750:intron | 35.0% | |
ACCGACCCATGTAAAAAAAA+GGG | + | chr3_4:53407909-53407928 | Msa0506750:intron | 35.0% | |
!!! | ACCCTTTTTTTTACATGGGT+CGG | - | chr3_4:53407913-53407932 | None:intergenic | 35.0% |
CTAGATTGAATTGGGATACA+TGG | + | chr3_4:53408005-53408024 | Msa0506750:intron | 35.0% | |
TACGATATGAAAACAGCCAT+GGG | - | chr3_4:53408083-53408102 | None:intergenic | 35.0% | |
ATACGATATGAAAACAGCCA+TGG | - | chr3_4:53408084-53408103 | None:intergenic | 35.0% | |
!! | TGGCTGTTTTCATATCGTAT+CGG | + | chr3_4:53408084-53408103 | Msa0506750:intron | 35.0% |
!!! | TGATTACTTTTTGTACAGGG+TGG | + | chr3_4:53408402-53408421 | Msa0506750:intron | 35.0% |
CAAATAAGATGCAGAAGTCT+TGG | - | chr3_4:53408589-53408608 | None:intergenic | 35.0% | |
CAAGACTTCTGCATCTTATT+TGG | + | chr3_4:53408587-53408606 | Msa0506750:CDS | 35.0% | |
CTTATTTGGCAAAGATCCAA+TGG | + | chr3_4:53408601-53408620 | Msa0506750:CDS | 35.0% | |
AGCAACGACTAATGATACTA+TGG | - | chr3_4:53408739-53408758 | None:intergenic | 35.0% | |
TGTTATGAGAAGAAGTTAGG+AGG | + | chr3_4:53409117-53409136 | Msa0506750:CDS | 35.0% | |
GAGGAAGGGAAATTGAAAAT+CGG | + | chr3_4:53409136-53409155 | Msa0506750:CDS | 35.0% | |
! | ACTGTCTAGAAGTATGTTTC+TGG | - | chr3_4:53409516-53409535 | None:intergenic | 35.0% |
! | TATTGAAAGGGTGCAAAGCA+TGG | + | chr3_4:53403155-53403174 | Msa0506750:five_prime_UTR | 40.0% |
TGCAAATCTGCTGCAATTAC+CGG | + | chr3_4:53403222-53403241 | Msa0506750:five_prime_UTR | 40.0% | |
ATTTACCATTCTATCCTCCC+AGG | + | chr3_4:53403358-53403377 | Msa0506750:CDS | 40.0% | |
GGGAAACAATGGTCAGAAAA+AGG | - | chr3_4:53403535-53403554 | None:intergenic | 40.0% | |
AACTTTGAGCACCTTAAGAG+TGG | - | chr3_4:53403604-53403623 | None:intergenic | 40.0% | |
ATTTGAACAAAGGCTTACGG+AGG | - | chr3_4:53403724-53403743 | None:intergenic | 40.0% | |
TCCGTAAGCCTTTGTTCAAA+TGG | + | chr3_4:53403723-53403742 | Msa0506750:intron | 40.0% | |
GCCATTTGAACAAAGGCTTA+CGG | - | chr3_4:53403727-53403746 | None:intergenic | 40.0% | |
! | CACAGTTGTCTGTGAGTTTT+AGG | + | chr3_4:53403802-53403821 | Msa0506750:intron | 40.0% |
GGTTAAGTAGTTGCGAACAT+AGG | + | chr3_4:53403902-53403921 | Msa0506750:intron | 40.0% | |
TATTATCTTCCTTGTGTCGC+AGG | + | chr3_4:53404136-53404155 | Msa0506750:intron | 40.0% | |
ATGTCAGCAACACTTAACGA+AGG | + | chr3_4:53404236-53404255 | Msa0506750:CDS | 40.0% | |
AGCAACACTTAACGAAGGAA+AGG | + | chr3_4:53404241-53404260 | Msa0506750:CDS | 40.0% | |
GCAACACTTAACGAAGGAAA+GGG | + | chr3_4:53404242-53404261 | Msa0506750:CDS | 40.0% | |
ACTTAACGAAGGAAAGGGAA+AGG | + | chr3_4:53404247-53404266 | Msa0506750:CDS | 40.0% | |
! | AAGAGGGAATATCTTTAGGG+CGG | - | chr3_4:53404313-53404332 | None:intergenic | 40.0% |
GAATAAGTTGCCAAGGAAGA+GGG | - | chr3_4:53404329-53404348 | None:intergenic | 40.0% | |
AGAATAAGTTGCCAAGGAAG+AGG | - | chr3_4:53404330-53404349 | None:intergenic | 40.0% | |
GTAACTTTACCTAAAGGCCT+TGG | + | chr3_4:53404350-53404369 | Msa0506750:CDS | 40.0% | |
! | TCAGCTTGCGTAATTTTCTC+TGG | - | chr3_4:53404437-53404456 | None:intergenic | 40.0% |
AATAGAGTCCTACACAAAGC+TGG | + | chr3_4:53404550-53404569 | Msa0506750:CDS | 40.0% | |
ACAATTGGCAGGTATGAGAA+TGG | - | chr3_4:53404632-53404651 | None:intergenic | 40.0% | |
GGAGATTGAGATATCCCATT+GGG | + | chr3_4:53404703-53404722 | Msa0506750:CDS | 40.0% | |
GAGATTGAGATATCCCATTG+GGG | + | chr3_4:53404704-53404723 | Msa0506750:CDS | 40.0% | |
! | AGAGCAAAGGAGAATTTTCC+AGG | + | chr3_4:53404774-53404793 | Msa0506750:CDS | 40.0% |
ATCACAGAAACAAGGTAACC+TGG | - | chr3_4:53404795-53404814 | None:intergenic | 40.0% | |
TAAACAGAATGAGCTCTTGG+TGG | - | chr3_4:53404942-53404961 | None:intergenic | 40.0% | |
GAGCTCATTCTGTTTACTAC+AGG | + | chr3_4:53404946-53404965 | Msa0506750:CDS | 40.0% | |
TTTGTGGGGTGACTCAAAAA+AGG | + | chr3_4:53404998-53405017 | Msa0506750:CDS | 40.0% | |
! | TTTTCCAGCCACCAAAAAGT+GGG | - | chr3_4:53405134-53405153 | None:intergenic | 40.0% |
TGGTTCCCCCATTAATGATT+TGG | + | chr3_4:53405236-53405255 | Msa0506750:CDS | 40.0% | |
! | GATTGACACTCTTGTTGTGA+AGG | + | chr3_4:53405260-53405279 | Msa0506750:CDS | 40.0% |
TTCACAGGAAATGGAACAGA+TGG | - | chr3_4:53405638-53405657 | None:intergenic | 40.0% | |
TCCTGTGAAAGAAAGACATG+AGG | + | chr3_4:53405649-53405668 | Msa0506750:CDS | 40.0% | |
ACCTCATGTCTTTCTTTCAC+AGG | - | chr3_4:53405653-53405672 | None:intergenic | 40.0% | |
! | GCAGACAAAGTTTTCACACT+TGG | + | chr3_4:53405764-53405783 | Msa0506750:intron | 40.0% |
TACTCCCTCCATCTCATATT+AGG | + | chr3_4:53405979-53405998 | Msa0506750:intron | 40.0% | |
GACACCTAATATGAGATGGA+GGG | - | chr3_4:53405986-53406005 | None:intergenic | 40.0% | |
AAGGGACACCTAATATGAGA+TGG | - | chr3_4:53405990-53406009 | None:intergenic | 40.0% | |
!!! | GTCCCTTTTGAGTTTTACAC+GGG | + | chr3_4:53406003-53406022 | Msa0506750:intron | 40.0% |
!!! | GACGACACCTATTTTTGAGA+CGG | + | chr3_4:53406226-53406245 | Msa0506750:intron | 40.0% |
!!! | ACACCTATTTTTGAGACGGA+GGG | + | chr3_4:53406230-53406249 | Msa0506750:intron | 40.0% |
AGTGTCCTGAATTTGTAAGG+AGG | + | chr3_4:53406259-53406278 | Msa0506750:intron | 40.0% | |
GTGTCCTGAATTTGTAAGGA+GGG | + | chr3_4:53406260-53406279 | Msa0506750:intron | 40.0% | |
ACTAGCTGGATTTGTAAGGA+TGG | + | chr3_4:53406445-53406464 | Msa0506750:intron | 40.0% | |
TGGATTTGTAAGGATGGTGT+AGG | + | chr3_4:53406451-53406470 | Msa0506750:intron | 40.0% | |
AGACCTACTAGTTGTGATCA+TGG | + | chr3_4:53406608-53406627 | Msa0506750:intron | 40.0% | |
CTACCATGATCACAACTAGT+AGG | - | chr3_4:53406614-53406633 | None:intergenic | 40.0% | |
GAAACAGATCGTGTATGTGT+TGG | + | chr3_4:53406838-53406857 | Msa0506750:intron | 40.0% | |
GTAAAGGAATAGAAGGTGAG+TGG | + | chr3_4:53406866-53406885 | Msa0506750:intron | 40.0% | |
! | AATAGAAGGTGAGTGGCTTT+TGG | + | chr3_4:53406873-53406892 | Msa0506750:intron | 40.0% |
! | ATAGAAGGTGAGTGGCTTTT+GGG | + | chr3_4:53406874-53406893 | Msa0506750:intron | 40.0% |
GGGAATAGCTCCAAATTAAC+TGG | + | chr3_4:53406894-53406913 | Msa0506750:intron | 40.0% | |
GAATTTCAGTTGCAGAAACC+AGG | - | chr3_4:53407148-53407167 | None:intergenic | 40.0% | |
TATACTGGGTGTGATACTGA+TGG | + | chr3_4:53407236-53407255 | Msa0506750:intron | 40.0% | |
ATACTGGGTGTGATACTGAT+GGG | + | chr3_4:53407237-53407256 | Msa0506750:intron | 40.0% | |
GCATTGAGAAAACTCAAGCA+TGG | + | chr3_4:53407261-53407280 | Msa0506750:intron | 40.0% | |
CTCAAGCATGGTAGTCAAAT+CGG | + | chr3_4:53407273-53407292 | Msa0506750:intron | 40.0% | |
TCAAGCATGGTAGTCAAATC+GGG | + | chr3_4:53407274-53407293 | Msa0506750:intron | 40.0% | |
!! | TTTTTGGTCAAGTAGCCTAG+TGG | + | chr3_4:53407438-53407457 | Msa0506750:intron | 40.0% |
TAAGGTGAATTCTAGCCACT+AGG | - | chr3_4:53407456-53407475 | None:intergenic | 40.0% | |
CCCCACTTATTCACCTTATA+AGG | - | chr3_4:53407474-53407493 | None:intergenic | 40.0% | |
TCTCTGCTCATTCACTAATG+GGG | - | chr3_4:53407677-53407696 | None:intergenic | 40.0% | |
CTCTCTGCTCATTCACTAAT+GGG | - | chr3_4:53407678-53407697 | None:intergenic | 40.0% | |
TCTCTCTGCTCATTCACTAA+TGG | - | chr3_4:53407679-53407698 | None:intergenic | 40.0% | |
TAGACCGTAGAGAGAAAAAG+AGG | + | chr3_4:53407737-53407756 | Msa0506750:intron | 40.0% | |
AGAGAGAAAAAGAGGAAGTG+TGG | + | chr3_4:53407745-53407764 | Msa0506750:intron | 40.0% | |
! | GAGAGAAAAAGAGGAAGTGT+GGG | + | chr3_4:53407746-53407765 | Msa0506750:intron | 40.0% |
CAAAACCCTAGAACAGAAAG+CGG | + | chr3_4:53407837-53407856 | Msa0506750:intron | 40.0% | |
GTGTTTCACTTGCAGAAACT+GGG | - | chr3_4:53407962-53407981 | None:intergenic | 40.0% | |
CCTGCTATACATGGTCATTT+GGG | + | chr3_4:53408034-53408053 | Msa0506750:intron | 40.0% | |
!! | GGCTGTTTTCATATCGTATC+GGG | + | chr3_4:53408085-53408104 | Msa0506750:intron | 40.0% |
ATACGTATCGTGGGATACAT+GGG | + | chr3_4:53408108-53408127 | Msa0506750:intron | 40.0% | |
AAAATCGACGTGTAAGGTGA+GGG | - | chr3_4:53408209-53408228 | None:intergenic | 40.0% | |
CCTTACAAAATCGACGTGTA+AGG | - | chr3_4:53408215-53408234 | None:intergenic | 40.0% | |
!!! | CCTTACACGTCGATTTTGTA+AGG | + | chr3_4:53408212-53408231 | Msa0506750:intron | 40.0% |
!! | TCATACTTAGATGGGCTGAT+GGG | - | chr3_4:53408332-53408351 | None:intergenic | 40.0% |
!! | TTCATACTTAGATGGGCTGA+TGG | - | chr3_4:53408333-53408352 | None:intergenic | 40.0% |
ATCAGCCCATCTAAGTATGA+AGG | + | chr3_4:53408332-53408351 | Msa0506750:intron | 40.0% | |
AGACACGACAACTAGAGAAA+AGG | + | chr3_4:53408367-53408386 | Msa0506750:intron | 40.0% | |
GACACGACAACTAGAGAAAA+GGG | + | chr3_4:53408368-53408387 | Msa0506750:intron | 40.0% | |
!! | GAGCCGTTAATGTTGATTTC+TGG | + | chr3_4:53408507-53408526 | Msa0506750:CDS | 40.0% |
AGTTGATTACCTCTTCCCAT+TGG | - | chr3_4:53408620-53408639 | None:intergenic | 40.0% | |
GGTTCAAGCAACTATTCATC+AGG | + | chr3_4:53408712-53408731 | Msa0506750:intron | 40.0% | |
! | TCTAGGACAGGTGATATTCA+AGG | + | chr3_4:53408800-53408819 | Msa0506750:CDS | 40.0% |
CTAGGACAGGTGATATTCAA+GGG | + | chr3_4:53408801-53408820 | Msa0506750:CDS | 40.0% | |
!! | CGAGCTATCAACTGATTTTC+TGG | - | chr3_4:53408837-53408856 | None:intergenic | 40.0% |
GAAGACTGCAAAAATGTCAC+AGG | - | chr3_4:53408890-53408909 | None:intergenic | 40.0% | |
GACCTTGGGTAATATTTGAG+CGG | - | chr3_4:53408921-53408940 | None:intergenic | 40.0% | |
!! | TACCCAAGGTCATTTTGGAA+TGG | + | chr3_4:53408930-53408949 | Msa0506750:intron | 40.0% |
AGCCATTCCAAAATGACCTT+GGG | - | chr3_4:53408935-53408954 | None:intergenic | 40.0% | |
AAGCCATTCCAAAATGACCT+TGG | - | chr3_4:53408936-53408955 | None:intergenic | 40.0% | |
AGATTTGCAGGAGAAGCTTA+TGG | + | chr3_4:53409071-53409090 | Msa0506750:CDS | 40.0% | |
ATGAGAAGAAGTTAGGAGGA+AGG | + | chr3_4:53409121-53409140 | Msa0506750:CDS | 40.0% | |
TGAGAAGAAGTTAGGAGGAA+GGG | + | chr3_4:53409122-53409141 | Msa0506750:CDS | 40.0% | |
!!! | TTAGCGATACTTGTTTTGCG+TGG | + | chr3_4:53409338-53409357 | Msa0506750:three_prime_UTR | 40.0% |
!!! | TAGCGATACTTGTTTTGCGT+GGG | + | chr3_4:53409339-53409358 | Msa0506750:three_prime_UTR | 40.0% |
GCAAATCTGCTGCAATTACC+GGG | + | chr3_4:53403223-53403242 | Msa0506750:five_prime_UTR | 45.0% | |
!!! | TCAGTGAGAGCGTTTTGGTT+TGG | + | chr3_4:53403255-53403274 | Msa0506750:five_prime_UTR | 45.0% |
ACTTACACGACGGTCAACTT+TGG | - | chr3_4:53403405-53403424 | None:intergenic | 45.0% | |
! | GGGCATTGCCATTTGAACAA+AGG | - | chr3_4:53403734-53403753 | None:intergenic | 45.0% |
TGTGTCCAGCCTAGCAATAT+GGG | - | chr3_4:53403756-53403775 | None:intergenic | 45.0% | |
ATGTGTCCAGCCTAGCAATA+TGG | - | chr3_4:53403757-53403776 | None:intergenic | 45.0% | |
TGAAGTTCCAGGTTTGAACC+CGG | - | chr3_4:53403784-53403803 | None:intergenic | 45.0% | |
ACAGACAACTGTGAAGTTCC+AGG | - | chr3_4:53403795-53403814 | None:intergenic | 45.0% | |
AGTTGCGAACATAGGCTTAG+AGG | + | chr3_4:53403910-53403929 | Msa0506750:intron | 45.0% | |
GGAAAGGCGAAATCATCTTC+TGG | + | chr3_4:53404263-53404282 | Msa0506750:CDS | 45.0% | |
GCGAAATCATCTTCTGGTGT+TGG | + | chr3_4:53404269-53404288 | Msa0506750:CDS | 45.0% | |
TTAGGGCGGACAACTTCATA+GGG | - | chr3_4:53404299-53404318 | None:intergenic | 45.0% | |
! | TTTAGGGCGGACAACTTCAT+AGG | - | chr3_4:53404300-53404319 | None:intergenic | 45.0% |
TTTACCTAAAGGCCTTGGGA+AGG | + | chr3_4:53404355-53404374 | Msa0506750:CDS | 45.0% | |
TTACCTAAAGGCCTTGGGAA+GGG | + | chr3_4:53404356-53404375 | Msa0506750:CDS | 45.0% | |
TCTTTCTCCTTATCCCGTGA+AGG | + | chr3_4:53404493-53404512 | Msa0506750:CDS | 45.0% | |
ATTGAGCGATTGGACCTTCA+CGG | - | chr3_4:53404510-53404529 | None:intergenic | 45.0% | |
TAGGACTCTATTCTTGCCTC+AGG | - | chr3_4:53404542-53404561 | None:intergenic | 45.0% | |
ATTGGCAGGTATGAGAATGG+AGG | - | chr3_4:53404629-53404648 | None:intergenic | 45.0% | |
AACTCTTTAGCAACGGCGAA+GGG | - | chr3_4:53404677-53404696 | None:intergenic | 45.0% | |
CCTCACCAACTCTTTAGCAA+CGG | - | chr3_4:53404684-53404703 | None:intergenic | 45.0% | |
!! | CGTTGCTAAAGAGTTGGTGA+GGG | + | chr3_4:53404682-53404701 | Msa0506750:CDS | 45.0% |
GGGAGATTGAGATATCCCAT+TGG | + | chr3_4:53404702-53404721 | Msa0506750:CDS | 45.0% | |
GATCTGTACATTGCCCCAAT+GGG | - | chr3_4:53404720-53404739 | None:intergenic | 45.0% | |
TGATCTGTACATTGCCCCAA+TGG | - | chr3_4:53404721-53404740 | None:intergenic | 45.0% | |
GCAGATGCACCTCTTACATA+TGG | - | chr3_4:53404894-53404913 | None:intergenic | 45.0% | |
! | TAAGAGGTGCATCTGCCTTT+AGG | + | chr3_4:53404898-53404917 | Msa0506750:CDS | 45.0% |
CAGAACTTGAGATCGAACCT+CGG | + | chr3_4:53405106-53405125 | Msa0506750:CDS | 45.0% | |
! | GTTTTCCAGCCACCAAAAAG+TGG | - | chr3_4:53405135-53405154 | None:intergenic | 45.0% |
AAGTGGCAACCCATATCCAA+TGG | - | chr3_4:53405166-53405185 | None:intergenic | 45.0% | |
CCAAACAAGAAGTCCTGAAG+TGG | - | chr3_4:53405183-53405202 | None:intergenic | 45.0% | |
CCACTTCAGGACTTCTTGTT+TGG | + | chr3_4:53405180-53405199 | Msa0506750:CDS | 45.0% | |
! | GACTTCTTGTTTGGAGTCGA+TGG | + | chr3_4:53405189-53405208 | Msa0506750:CDS | 45.0% |
AACCTGAAAGTTGCAAGCAC+CGG | - | chr3_4:53405585-53405604 | None:intergenic | 45.0% | |
!! | TTTCAGGTTGTCTTGCCAGA+GGG | + | chr3_4:53405596-53405615 | Msa0506750:intron | 45.0% |
TTCTTCTCTAGCACGACAAC+AGG | - | chr3_4:53405804-53405823 | None:intergenic | 45.0% | |
GGACACCTAATATGAGATGG+AGG | - | chr3_4:53405987-53406006 | None:intergenic | 45.0% | |
!!! | GACACCTATTTTTGAGACGG+AGG | + | chr3_4:53406229-53406248 | Msa0506750:intron | 45.0% |
ACTCCCTCCGTCTCAAAAAT+AGG | - | chr3_4:53406236-53406255 | None:intergenic | 45.0% | |
AAATCCAGCTAGTGCGTTGA+GGG | - | chr3_4:53406438-53406457 | None:intergenic | 45.0% | |
ACGCACTAGCTGGATTTGTA+AGG | + | chr3_4:53406441-53406460 | Msa0506750:intron | 45.0% | |
TAGGCTAGTACTACTGGGTT+GGG | - | chr3_4:53406553-53406572 | None:intergenic | 45.0% | |
AAGCCTAGGCTAGTACTACT+GGG | - | chr3_4:53406558-53406577 | None:intergenic | 45.0% | |
TAAGCCTAGGCTAGTACTAC+TGG | - | chr3_4:53406559-53406578 | None:intergenic | 45.0% | |
GTATGTGTTGGAAGCCGTAA+AGG | + | chr3_4:53406850-53406869 | Msa0506750:intron | 45.0% | |
GGAAGCCGTAAAGGAATAGA+AGG | + | chr3_4:53406859-53406878 | Msa0506750:intron | 45.0% | |
TGTAACCCATCAGCTATTGC+AGG | - | chr3_4:53406994-53407013 | None:intergenic | 45.0% | |
! | CAAACACCCACGGTTTTCTT+GGG | - | chr3_4:53407026-53407045 | None:intergenic | 45.0% |
CAAGAAAACCGTGGGTGTTT+GGG | + | chr3_4:53407025-53407044 | Msa0506750:intron | 45.0% | |
AAGAAAACCGTGGGTGTTTG+GGG | + | chr3_4:53407026-53407045 | Msa0506750:intron | 45.0% | |
TTATGGAACAGTCCTGGAAC+CGG | - | chr3_4:53407080-53407099 | None:intergenic | 45.0% | |
AGGGGGGATACTAACTATAC+TGG | + | chr3_4:53407221-53407240 | Msa0506750:intron | 45.0% | |
GGGGGGATACTAACTATACT+GGG | + | chr3_4:53407222-53407241 | Msa0506750:intron | 45.0% | |
ATTATTATATGCAGGGGCCG+GGG | - | chr3_4:53407512-53407531 | None:intergenic | 45.0% | |
CATTATTATATGCAGGGGCC+GGG | - | chr3_4:53407513-53407532 | None:intergenic | 45.0% | |
GCATTATTATATGCAGGGGC+CGG | - | chr3_4:53407514-53407533 | None:intergenic | 45.0% | |
! | ACAAGAACGTGTGCAGCTTT+TGG | + | chr3_4:53407781-53407800 | Msa0506750:intron | 45.0% |
! | CAAGAACGTGTGCAGCTTTT+GGG | + | chr3_4:53407782-53407801 | Msa0506750:intron | 45.0% |
GTCAACCGCTTTCTGTTCTA+GGG | - | chr3_4:53407845-53407864 | None:intergenic | 45.0% | |
ACATGGGTCGGTACTAGAAA+CGG | - | chr3_4:53407901-53407920 | None:intergenic | 45.0% | |
CGTGTTTCACTTGCAGAAAC+TGG | - | chr3_4:53407963-53407982 | None:intergenic | 45.0% | |
GCCTGCTATACATGGTCATT+TGG | + | chr3_4:53408033-53408052 | Msa0506750:intron | 45.0% | |
CCCAAATGACCATGTATAGC+AGG | - | chr3_4:53408037-53408056 | None:intergenic | 45.0% | |
CCATGGGCAAATACGTATCA+GGG | - | chr3_4:53408067-53408086 | None:intergenic | 45.0% | |
GATACGTATCGTGGGATACA+TGG | + | chr3_4:53408107-53408126 | Msa0506750:intron | 45.0% | |
TACGTATCGTGGGATACATG+GGG | + | chr3_4:53408109-53408128 | Msa0506750:intron | 45.0% | |
AAATCGACGTGTAAGGTGAG+GGG | - | chr3_4:53408208-53408227 | None:intergenic | 45.0% | |
CAAAATCGACGTGTAAGGTG+AGG | - | chr3_4:53408210-53408229 | None:intergenic | 45.0% | |
!! | CATACTTAGATGGGCTGATG+GGG | - | chr3_4:53408331-53408350 | None:intergenic | 45.0% |
! | CAGGGTGGTTTGACTTTAGT+AGG | + | chr3_4:53408417-53408436 | Msa0506750:intron | 45.0% |
TCAACCGTCTTTCTATGCTC+AGG | + | chr3_4:53408484-53408503 | Msa0506750:CDS | 45.0% | |
CAACCGTCTTTCTATGCTCA+GGG | + | chr3_4:53408485-53408504 | Msa0506750:CDS | 45.0% | |
TGCATGCATGTAGACAATGG+AGG | - | chr3_4:53408553-53408572 | None:intergenic | 45.0% | |
GTCTGCATGCATGTAGACAA+TGG | - | chr3_4:53408556-53408575 | None:intergenic | 45.0% | |
CATCGTTGCGTGATCTTTCT+AGG | + | chr3_4:53408783-53408802 | Msa0506750:CDS | 45.0% | |
!! | TTGCGTGATCTTTCTAGGAC+AGG | + | chr3_4:53408788-53408807 | Msa0506750:CDS | 45.0% |
CTCGTTGAAAGAGCTCACAA+AGG | + | chr3_4:53408853-53408872 | Msa0506750:CDS | 45.0% | |
GGTAATATTTGAGCGGCTTG+TGG | - | chr3_4:53408914-53408933 | None:intergenic | 45.0% | |
AGCCGCTCAAATATTACCCA+AGG | + | chr3_4:53408916-53408935 | Msa0506750:CDS | 45.0% | |
GGTGGAGGAAGTAATTGCTA+AGG | + | chr3_4:53409044-53409063 | Msa0506750:intron | 45.0% | |
TGCTAAGGAGAGAGATTTGC+AGG | + | chr3_4:53409059-53409078 | Msa0506750:CDS | 45.0% | |
!! | AAACAAAAATAAAATAATTA+TGG | - | chr3_4:53409020-53409039 | None:intergenic | 5.0% |
TCTCACTGAACCAGAGATCC+CGG | - | chr3_4:53403244-53403263 | None:intergenic | 50.0% | |
!!! | CTGGTTCAGTGAGAGCGTTT+TGG | + | chr3_4:53403250-53403269 | Msa0506750:five_prime_UTR | 50.0% |
TGGTAAGGATGAGATCGGAG+AGG | - | chr3_4:53403385-53403404 | None:intergenic | 50.0% | |
CACGACGGTCAACTTTGGTA+AGG | - | chr3_4:53403400-53403419 | None:intergenic | 50.0% | |
!! | CCTTAAGAGTGGTAGTGGTG+CGG | - | chr3_4:53403593-53403612 | None:intergenic | 50.0% |
GAGCACCTTAAGAGTGGTAG+TGG | - | chr3_4:53403598-53403617 | None:intergenic | 50.0% | |
TGTCCAGCCTAGCAATATGG+GGG | - | chr3_4:53403754-53403773 | None:intergenic | 50.0% | |
GTGTCCAGCCTAGCAATATG+GGG | - | chr3_4:53403755-53403774 | None:intergenic | 50.0% | |
CTAGGCTGGACACATTCATC+CGG | + | chr3_4:53403762-53403781 | Msa0506750:intron | 50.0% | |
TAGGCTGGACACATTCATCC+GGG | + | chr3_4:53403763-53403782 | Msa0506750:intron | 50.0% | |
CATTCATCCGGGTTCAAACC+TGG | + | chr3_4:53403774-53403793 | Msa0506750:intron | 50.0% | |
CATTCTCTACCTGCGACACA+AGG | - | chr3_4:53404148-53404167 | None:intergenic | 50.0% | |
TCAAACTTTCGCCCTTCCCA+AGG | - | chr3_4:53404370-53404389 | None:intergenic | 50.0% | |
GAAGGGCGAAAGTTTGACGT+TGG | + | chr3_4:53404373-53404392 | Msa0506750:CDS | 50.0% | |
GATTGGACCTTCACGGGATA+AGG | - | chr3_4:53404503-53404522 | None:intergenic | 50.0% | |
TTGAGCGATTGGACCTTCAC+GGG | - | chr3_4:53404509-53404528 | None:intergenic | 50.0% | |
CAACTCTTTAGCAACGGCGA+AGG | - | chr3_4:53404678-53404697 | None:intergenic | 50.0% | |
CTTCGCCGTTGCTAAAGAGT+TGG | + | chr3_4:53404676-53404695 | Msa0506750:CDS | 50.0% | |
!! | CCGTTGCTAAAGAGTTGGTG+AGG | + | chr3_4:53404681-53404700 | Msa0506750:CDS | 50.0% |
CTGCTGCAGACTTGACTATC+AGG | + | chr3_4:53404863-53404882 | Msa0506750:intron | 50.0% | |
TGCACCTCTTACATATGGCC+TGG | - | chr3_4:53404889-53404908 | None:intergenic | 50.0% | |
CTTGGCAGTAAGACGCCTAA+AGG | - | chr3_4:53404916-53404935 | None:intergenic | 50.0% | |
GTCACCCCACAAACTAGAAG+TGG | - | chr3_4:53404991-53405010 | None:intergenic | 50.0% | |
GTGGGGTGACTCAAAAAAGG+TGG | + | chr3_4:53405001-53405020 | Msa0506750:intron | 50.0% | |
!! | GAACCTCGGTACCCACTTTT+TGG | + | chr3_4:53405120-53405139 | Msa0506750:CDS | 50.0% |
! | TGGATATGGGTTGCCACTTC+AGG | + | chr3_4:53405167-53405186 | Msa0506750:CDS | 50.0% |
!! | CTTTCAGGTTGTCTTGCCAG+AGG | + | chr3_4:53405595-53405614 | Msa0506750:intron | 50.0% |
CAAATCCAGCTAGTGCGTTG+AGG | - | chr3_4:53406439-53406458 | None:intergenic | 50.0% | |
!! | CTTTTGGTGGGTGACTCGAA+TGG | - | chr3_4:53406521-53406540 | None:intergenic | 50.0% |
CATTCGAGTCACCCACCAAA+AGG | + | chr3_4:53406519-53406538 | Msa0506750:intron | 50.0% | |
CTAGGCTAGTACTACTGGGT+TGG | - | chr3_4:53406554-53406573 | None:intergenic | 50.0% | |
! | CAACCCAGTAGTACTAGCCT+AGG | + | chr3_4:53406552-53406571 | Msa0506750:intron | 50.0% |
GTTCGCCTGCAATAGCTGAT+GGG | + | chr3_4:53406986-53407005 | Msa0506750:intron | 50.0% | |
AACCTGACCCAAGAAAACCG+TGG | + | chr3_4:53407016-53407035 | Msa0506750:intron | 50.0% | |
ACCTGACCCAAGAAAACCGT+GGG | + | chr3_4:53407017-53407036 | Msa0506750:intron | 50.0% | |
! | CCAAACACCCACGGTTTTCT+TGG | - | chr3_4:53407027-53407046 | None:intergenic | 50.0% |
CCAAGAAAACCGTGGGTGTT+TGG | + | chr3_4:53407024-53407043 | Msa0506750:intron | 50.0% | |
CAGAAAACCCCAAACACCCA+CGG | - | chr3_4:53407036-53407055 | None:intergenic | 50.0% | |
!! | GGTGTTTGGGGTTTTCTGGA+GGG | + | chr3_4:53407038-53407057 | Msa0506750:intron | 50.0% |
TATGGAACAGTCCTGGAACC+GGG | - | chr3_4:53407079-53407098 | None:intergenic | 50.0% | |
TGGGATATGCATCGTGGGAT+AGG | + | chr3_4:53407201-53407220 | Msa0506750:intron | 50.0% | |
GGGATATGCATCGTGGGATA+GGG | + | chr3_4:53407202-53407221 | Msa0506750:intron | 50.0% | |
GGATATGCATCGTGGGATAG+GGG | + | chr3_4:53407203-53407222 | Msa0506750:intron | 50.0% | |
GATATGCATCGTGGGATAGG+GGG | + | chr3_4:53407204-53407223 | Msa0506750:intron | 50.0% | |
ATATGCATCGTGGGATAGGG+GGG | + | chr3_4:53407205-53407224 | Msa0506750:intron | 50.0% | |
! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr3_4:53407478-53407497 | Msa0506750:intron | 50.0% |
TGAGCATAGCTCAGTTGGCA+GGG | - | chr3_4:53407542-53407561 | None:intergenic | 50.0% | |
GGGGCAGAACCCTTAGAATT+TGG | - | chr3_4:53407658-53407677 | None:intergenic | 50.0% | |
GAGCAGAGAGAAACAGAGCA+TGG | + | chr3_4:53407688-53407707 | Msa0506750:intron | 50.0% | |
GGTCAACCGCTTTCTGTTCT+AGG | - | chr3_4:53407846-53407865 | None:intergenic | 50.0% | |
! | TTTGACGGGTCACACAATCC+CGG | + | chr3_4:53407874-53407893 | Msa0506750:intron | 50.0% |
CATGGGTCGGTACTAGAAAC+GGG | - | chr3_4:53407900-53407919 | None:intergenic | 50.0% | |
TCACTTGCAGAAACTGGGTC+AGG | - | chr3_4:53407957-53407976 | None:intergenic | 50.0% | |
TGGGATACGCCTGCTATACA+TGG | + | chr3_4:53408025-53408044 | Msa0506750:intron | 50.0% | |
CCCTGATACGTATTTGCCCA+TGG | + | chr3_4:53408064-53408083 | Msa0506750:intron | 50.0% | |
GCCATGGGCAAATACGTATC+AGG | - | chr3_4:53408068-53408087 | None:intergenic | 50.0% | |
TCGTATCGGGATACGTATCG+TGG | + | chr3_4:53408098-53408117 | Msa0506750:intron | 50.0% | |
CGTATCGGGATACGTATCGT+GGG | + | chr3_4:53408099-53408118 | Msa0506750:intron | 50.0% | |
TACTCTTGCGCCTGTATTGC+AGG | + | chr3_4:53408449-53408468 | Msa0506750:CDS | 50.0% | |
GCTCCCTGAGCATAGAAAGA+CGG | - | chr3_4:53408491-53408510 | None:intergenic | 50.0% | |
GGCAAAGATCCAATGGGAAG+AGG | + | chr3_4:53408608-53408627 | Msa0506750:CDS | 50.0% | |
GCTGCAATTACCGGGATCTC+TGG | + | chr3_4:53403231-53403250 | Msa0506750:five_prime_UTR | 55.0% | |
GAGGACCTGGGAGGATAGAA+TGG | - | chr3_4:53403366-53403385 | None:intergenic | 55.0% | |
GATGAGATCGGAGAGGACCT+GGG | - | chr3_4:53403378-53403397 | None:intergenic | 55.0% | |
CCGCACCACTACCACTCTTA+AGG | + | chr3_4:53403590-53403609 | Msa0506750:CDS | 55.0% | |
GGCAATGCCCCCATATTGCT+AGG | + | chr3_4:53403744-53403763 | Msa0506750:intron | 55.0% | |
ATGCCCCCATATTGCTAGGC+TGG | + | chr3_4:53403748-53403767 | Msa0506750:intron | 55.0% | |
GTGTCGCAGGTAGAGAATGC+AGG | + | chr3_4:53404149-53404168 | Msa0506750:intron | 55.0% | |
GCAGACTTGACTATCAGGCC+AGG | + | chr3_4:53404868-53404887 | Msa0506750:intron | 55.0% | |
CAGGCCAGGCCATATGTAAG+AGG | + | chr3_4:53404882-53404901 | Msa0506750:CDS | 55.0% | |
! | ATGAGCTCTTGGTGGCAGCT+TGG | - | chr3_4:53404934-53404953 | None:intergenic | 55.0% |
! | CCACCAAAAAGTGGGTACCG+AGG | - | chr3_4:53405126-53405145 | None:intergenic | 55.0% |
!!! | CCTCGGTACCCACTTTTTGG+TGG | + | chr3_4:53405123-53405142 | Msa0506750:CDS | 55.0% |
!!! | GGTACCCACTTTTTGGTGGC+TGG | + | chr3_4:53405127-53405146 | Msa0506750:CDS | 55.0% |
TGCCGGTGCTTGCAACTTTC+AGG | + | chr3_4:53405580-53405599 | Msa0506750:intron | 55.0% | |
! | GGGTGCATGGACCTTTTGGT+GGG | - | chr3_4:53406533-53406552 | None:intergenic | 55.0% |
! | TGGGTGCATGGACCTTTTGG+TGG | - | chr3_4:53406534-53406553 | None:intergenic | 55.0% |
! | GGTTGGGTGCATGGACCTTT+TGG | - | chr3_4:53406537-53406556 | None:intergenic | 55.0% |
! | GTACTACTGGGTTGGGTGCA+TGG | - | chr3_4:53406546-53406565 | None:intergenic | 55.0% |
GGTTCGCCTGCAATAGCTGA+TGG | + | chr3_4:53406985-53407004 | Msa0506750:intron | 55.0% | |
! | ACCCACGGTTTTCTTGGGTC+AGG | - | chr3_4:53407021-53407040 | None:intergenic | 55.0% |
!! | CGTGGGTGTTTGGGGTTTTC+TGG | + | chr3_4:53407034-53407053 | Msa0506750:intron | 55.0% |
!! | GGGTGTTTGGGGTTTTCTGG+AGG | + | chr3_4:53407037-53407056 | Msa0506750:intron | 55.0% |
! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr3_4:53407479-53407498 | Msa0506750:intron | 55.0% |
! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr3_4:53407480-53407499 | Msa0506750:intron | 55.0% |
GTGAGCATAGCTCAGTTGGC+AGG | - | chr3_4:53407543-53407562 | None:intergenic | 55.0% | |
CCTCGTGAGCATAGCTCAGT+TGG | - | chr3_4:53407547-53407566 | None:intergenic | 55.0% | |
CCAACTGAGCTATGCTCACG+AGG | + | chr3_4:53407544-53407563 | Msa0506750:intron | 55.0% | |
! | AGAAACTGGGTCAGGTTGCG+CGG | - | chr3_4:53407949-53407968 | None:intergenic | 55.0% |
!! | CTTAGATGGGCTGATGGGGT+TGG | - | chr3_4:53408327-53408346 | None:intergenic | 55.0% |
GGATGAGATCGGAGAGGACC+TGG | - | chr3_4:53403379-53403398 | None:intergenic | 60.0% | |
TCGCCCTTCCCAAGGCCTTT+AGG | - | chr3_4:53404362-53404381 | None:intergenic | 60.0% | |
CATGGCGGTGCTCAGAGCAA+AGG | + | chr3_4:53404761-53404780 | Msa0506750:CDS | 60.0% | |
GCATCCCTCAACGCACTAGC+TGG | + | chr3_4:53406431-53406450 | Msa0506750:intron | 60.0% | |
GGTGGGTGACTCGAATGGAC+AGG | - | chr3_4:53406516-53406535 | None:intergenic | 60.0% | |
GGGTCATGCAAAACCCGACC+CGG | + | chr3_4:53407058-53407077 | Msa0506750:intron | 60.0% | |
AACAGTCCTGGAACCGGGTC+GGG | - | chr3_4:53407074-53407093 | None:intergenic | 60.0% | |
GAACAGTCCTGGAACCGGGT+CGG | - | chr3_4:53407075-53407094 | None:intergenic | 60.0% | |
GTCGGTACTAGAAACGGGCC+GGG | - | chr3_4:53407895-53407914 | None:intergenic | 60.0% | |
GGTCGGTACTAGAAACGGGC+CGG | - | chr3_4:53407896-53407915 | None:intergenic | 60.0% | |
GAGATCGGAGAGGACCTGGG+AGG | - | chr3_4:53403375-53403394 | None:intergenic | 65.0% | |
GCAAAACCCGACCCGGTTCC+AGG | + | chr3_4:53407065-53407084 | Msa0506750:intron | 65.0% | |
GGTGTCCGGGGTTCGAACCC+CGG | + | chr3_4:53407492-53407511 | Msa0506750:intron | 70.0% | |
! | CTGGGTCAGGTTGCGCGGTC+CGG | - | chr3_4:53407944-53407963 | None:intergenic | 70.0% |
AGGGGCCGGGGTTCGAACCC+CGG | - | chr3_4:53407500-53407519 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 53403145 | 53409561 | 53403145 | ID=Msa0506750;Name=Msa0506750 |
chr3_4 | mRNA | 53403145 | 53409561 | 53403145 | ID=Msa0506750-mRNA-1;Parent=Msa0506750;Name=Msa0506750-mRNA-1;_AED=0.05;_eAED=0.05;_QI=166|0.77|0.7|1|1|1|10|325|633 |
chr3_4 | exon | 53403145 | 53403418 | 53403145 | ID=Msa0506750-mRNA-1:exon:11827;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53403567 | 53403611 | 53403567 | ID=Msa0506750-mRNA-1:exon:11828;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53404158 | 53404795 | 53404158 | ID=Msa0506750-mRNA-1:exon:11829;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53404872 | 53405019 | 53404872 | ID=Msa0506750-mRNA-1:exon:11830;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53405105 | 53405281 | 53405105 | ID=Msa0506750-mRNA-1:exon:11831;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53405602 | 53405670 | 53405602 | ID=Msa0506750-mRNA-1:exon:11832;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53405768 | 53405857 | 53405768 | ID=Msa0506750-mRNA-1:exon:11833;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53408420 | 53408629 | 53408420 | ID=Msa0506750-mRNA-1:exon:11834;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53408713 | 53408937 | 53408713 | ID=Msa0506750-mRNA-1:exon:11835;Parent=Msa0506750-mRNA-1 |
chr3_4 | exon | 53409045 | 53409561 | 53409045 | ID=Msa0506750-mRNA-1:exon:11836;Parent=Msa0506750-mRNA-1 |
chr3_4 | five_prime_UTR | 53403145 | 53403310 | 53403145 | ID=Msa0506750-mRNA-1:five_prime_utr;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53403311 | 53403418 | 53403311 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53403567 | 53403611 | 53403567 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53404158 | 53404795 | 53404158 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53404872 | 53405019 | 53404872 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53405105 | 53405281 | 53405105 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53405602 | 53405670 | 53405602 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53405768 | 53405857 | 53405768 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53408420 | 53408629 | 53408420 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53408713 | 53408937 | 53408713 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | CDS | 53409045 | 53409236 | 53409045 | ID=Msa0506750-mRNA-1:cds;Parent=Msa0506750-mRNA-1 |
chr3_4 | three_prime_UTR | 53409237 | 53409561 | 53409237 | ID=Msa0506750-mRNA-1:three_prime_utr;Parent=Msa0506750-mRNA-1 |
Gene Sequence |
Protein sequence |