Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080880 | XP_013450234.1 | 95.828 | 743 | 29 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080880 | A0A072U3F5 | 95.828 | 743 | 29 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1080880 | Msa1082410 | 0.815337 | 9.737784e-52 | -8.615850e-47 |
| Msa1080880 | Msa1119020 | 0.934266 | 5.267339e-96 | -8.615850e-47 |
| Msa1080880 | Msa1131930 | 0.954420 | 3.082928e-112 | -8.615850e-47 |
| Msa1080880 | Msa1166740 | 0.874183 | 8.241601e-68 | -8.615850e-47 |
| Msa1080880 | Msa1380320 | 0.995436 | 3.029163e-216 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080880 | MtrunA17_Chr7g0267631 | 95.828 | 743 | 29 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1430 |
| Msa1080880 | MtrunA17_Chr1g0176961 | 59.073 | 777 | 259 | 17 | 1 | 742 | 1 | 753 | 0.0 | 845 |
| Msa1080880 | MtrunA17_Chr3g0137731 | 48.684 | 304 | 124 | 6 | 408 | 708 | 323 | 597 | 1.34e-81 | 272 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1080880 | AT3G11760.1 | 52.639 | 758 | 246 | 23 | 1 | 709 | 1 | 694 | 0.0 | 682 |
| Msa1080880 | AT5G04860.1 | 44.403 | 795 | 349 | 27 | 1 | 737 | 1 | 760 | 1.41e-177 | 528 |
| Msa1080880 | AT5G04860.2 | 47.209 | 627 | 267 | 20 | 150 | 737 | 8 | 609 | 4.13e-150 | 452 |
| Msa1080880 | AT2G10560.1 | 50.187 | 267 | 107 | 9 | 484 | 736 | 3 | 257 | 8.21e-68 | 225 |
| Msa1080880 | AT2G25460.2 | 44.300 | 307 | 122 | 4 | 408 | 711 | 282 | 542 | 1.24e-65 | 228 |
| Msa1080880 | AT2G25460.1 | 51.748 | 143 | 63 | 2 | 408 | 549 | 282 | 419 | 4.04e-29 | 121 |
Find 159 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTAGCGCTTCAGATTAAA+TGG | 0.216187 | 7_2:-80621837 | Msa1080880:CDS |
| CAATGTCTTTCGACAACATT+TGG | 0.231091 | 7_2:-80619317 | Msa1080880:CDS |
| TCACAGAATTTGTATCTTCT+AGG | 0.236134 | 7_2:-80620476 | Msa1080880:CDS |
| CTTTCCTCGTCCATTCCTTC+TGG | 0.245300 | 7_2:+80619360 | None:intergenic |
| GTTGGGAATTCATTCCATTA+TGG | 0.256333 | 7_2:-80620309 | Msa1080880:CDS |
| TCAATTGATCAGACCAGTTT+TGG | 0.293862 | 7_2:-80620830 | Msa1080880:CDS |
| TTTGCACTTTGTGAGAAATA+AGG | 0.301603 | 7_2:+80620132 | None:intergenic |
| GACTGTCGAACTGGGACTTT+AGG | 0.304229 | 7_2:+80619541 | None:intergenic |
| TTTGAAGAAGATTGACGTAT+AGG | 0.315711 | 7_2:+80621859 | None:intergenic |
| ATGGAGGAAGAGGAAGTTTA+GGG | 0.329597 | 7_2:-80620094 | Msa1080880:CDS |
| GTTCCTGGCAAATCCTTCAT+TGG | 0.348050 | 7_2:-80619393 | Msa1080880:CDS |
| TACTACATCATTGACACATT+GGG | 0.351009 | 7_2:-80619186 | Msa1080880:CDS |
| ACTGTCGAACTGGGACTTTA+GGG | 0.351450 | 7_2:+80619542 | None:intergenic |
| CATGGAGGAAGAGGAAGTTT+AGG | 0.356353 | 7_2:-80620095 | Msa1080880:CDS |
| CTCGAATTAGACTGTCGAAC+TGG | 0.358791 | 7_2:+80619532 | None:intergenic |
| CGTCCGCTCTCTGTTGTTCC+TGG | 0.365341 | 7_2:-80619408 | Msa1080880:CDS |
| TTCATTCCATTATGGAACTT+TGG | 0.376536 | 7_2:-80620301 | Msa1080880:CDS |
| GCATGAAATCATGATAGTTC+TGG | 0.391849 | 7_2:+80619565 | None:intergenic |
| GTAGTGGTAGCAAGTATTCT+AGG | 0.392435 | 7_2:-80620419 | Msa1080880:CDS |
| CAGAGGCCAAAGTTCCATAA+TGG | 0.393125 | 7_2:+80620295 | None:intergenic |
| TATGTTTGTTGTTGGGAGTT+GGG | 0.393335 | 7_2:-80619727 | Msa1080880:CDS |
| TGGAATGTTCAAACCAAAAC+TGG | 0.397341 | 7_2:+80620817 | None:intergenic |
| AATTCCCATCAGAGAGTTGC+AGG | 0.397783 | 7_2:-80618893 | Msa1080880:CDS |
| AGAGTACATCAAAAGCTTCT+TGG | 0.399472 | 7_2:-80618920 | Msa1080880:CDS |
| AACTATTGCATGCCTGATGC+TGG | 0.399535 | 7_2:-80620195 | Msa1080880:CDS |
| TGATGCTGGGCGTTCGCATA+TGG | 0.400316 | 7_2:-80620181 | Msa1080880:CDS |
| ATGTAATTGTAGGGATTCAA+TGG | 0.409783 | 7_2:-80620917 | Msa1080880:intron |
| GTTCACTAGTTTCACAAGAC+TGG | 0.409902 | 7_2:-80619780 | Msa1080880:intron |
| ATATGTTTGTTGTTGGGAGT+TGG | 0.412413 | 7_2:-80619728 | Msa1080880:CDS |
| TCTAGATCAAAATGCCCATC+AGG | 0.415438 | 7_2:+80619453 | None:intergenic |
| CATCATCTTTGTAATCTCAA+TGG | 0.419230 | 7_2:-80621688 | Msa1080880:CDS |
| AAGCCGCCTAAAGAAGTTAT+CGG | 0.423411 | 7_2:-80619009 | Msa1080880:CDS |
| TTGTGATGACAAAGACATTT+GGG | 0.430469 | 7_2:-80620226 | Msa1080880:CDS |
| AACATTCCACTCACAAATCC+TGG | 0.431727 | 7_2:-80620803 | Msa1080880:CDS |
| TTGTTGCCGTAATTGCTGAT+TGG | 0.432647 | 7_2:-80619590 | Msa1080880:CDS |
| ATTGTGATGACAAAGACATT+TGG | 0.437795 | 7_2:-80620227 | Msa1080880:CDS |
| GGAGATGATATGTTTGTTGT+TGG | 0.447708 | 7_2:-80619735 | Msa1080880:CDS |
| GATACGCCAATCTCTGAATT+CGG | 0.451330 | 7_2:-80619756 | Msa1080880:CDS |
| AAGGCGGGCCGTGGAGAAGA+AGG | 0.457027 | 7_2:-80620444 | Msa1080880:CDS |
| CTGGAACCAATCAGCAATTA+CGG | 0.458400 | 7_2:+80619584 | None:intergenic |
| CTTAATGTAAAGAAACTCAT+TGG | 0.458855 | 7_2:-80621889 | Msa1080880:CDS |
| ACTTTGGCCTCTGCAAATGC+TGG | 0.460442 | 7_2:-80620285 | Msa1080880:CDS |
| AATGTCTTTCGACAACATTT+GGG | 0.464360 | 7_2:-80619316 | Msa1080880:CDS |
| GAGATGATATGTTTGTTGTT+GGG | 0.466826 | 7_2:-80619734 | Msa1080880:CDS |
| AAGCCGGCCTTAGGAAAGTA+AGG | 0.467172 | 7_2:-80620503 | Msa1080880:CDS |
| TCCTTACCGATAACTTCTTT+AGG | 0.471909 | 7_2:+80619003 | None:intergenic |
| ATATGCGAACGCCCAGCATC+AGG | 0.472606 | 7_2:+80620183 | None:intergenic |
| AGTTCTTACCTTCGAAGAGA+TGG | 0.472634 | 7_2:+80619981 | None:intergenic |
| ATCACAATTCATTCTCGTGT+TGG | 0.485727 | 7_2:+80620242 | None:intergenic |
| GCCATGGTTGCTTCCACCGC+AGG | 0.486435 | 7_2:+80618769 | None:intergenic |
| TTCACTGCGTTGATCAATTG+AGG | 0.487309 | 7_2:+80619644 | None:intergenic |
| GAAATTACAATGACAGAGAA+AGG | 0.488541 | 7_2:-80620543 | Msa1080880:CDS |
| TTCACTAGTTTCACAAGACT+GGG | 0.489487 | 7_2:-80619779 | Msa1080880:intron |
| TAGTGTGTCTGCTGCAGCCA+TGG | 0.489598 | 7_2:+80618753 | None:intergenic |
| GAATACGACCACGTTTCTGC+TGG | 0.496760 | 7_2:-80621739 | Msa1080880:CDS |
| CAACGCAGTGAACGCGCGGC+GGG | 0.497040 | 7_2:-80619633 | Msa1080880:CDS |
| ATCAGCCTGCAACTCTCTGA+TGG | 0.499347 | 7_2:+80618888 | None:intergenic |
| AAATCAGAAAAGGCGGGCCG+TGG | 0.509759 | 7_2:-80620453 | Msa1080880:CDS |
| AATGCAGATATCAATTAGCT+TGG | 0.510003 | 7_2:-80620628 | Msa1080880:intron |
| TCATCTCCGAATTCAGAGAT+TGG | 0.510194 | 7_2:+80619750 | None:intergenic |
| GCATACTTCCATGGAGGAAG+AGG | 0.512733 | 7_2:-80620104 | Msa1080880:CDS |
| AAACCTTACTTTCCTAAGGC+CGG | 0.513408 | 7_2:+80620500 | None:intergenic |
| TTGGTGACGAGTGGCGGCCA+TGG | 0.513831 | 7_2:+80621928 | None:intergenic |
| CAATGTCTTGTTTCATCCGT+GGG | 0.515075 | 7_2:-80621653 | Msa1080880:CDS |
| TGTAGAAATCGGTTCCCTGA+TGG | 0.515160 | 7_2:-80619468 | Msa1080880:CDS |
| TTTCACAAGAGAGGCTGTCA+TGG | 0.515952 | 7_2:-80621761 | Msa1080880:CDS |
| ATCAGGGAACCGATTTCTAC+AGG | 0.520123 | 7_2:+80619470 | None:intergenic |
| GGGAATGAGGATTCAAGTGT+TGG | 0.520748 | 7_2:-80620327 | Msa1080880:CDS |
| ACAATGAGACCTGTAGAAAT+CGG | 0.521853 | 7_2:-80619479 | Msa1080880:CDS |
| GTAGAAATCGGTTCCCTGAT+GGG | 0.523344 | 7_2:-80619467 | Msa1080880:CDS |
| TTTCTTTCATCCAGAAGGAA+TGG | 0.524452 | 7_2:-80619370 | Msa1080880:CDS |
| CTAAACTTCCTCTTCCTCCA+TGG | 0.527587 | 7_2:+80620096 | None:intergenic |
| TTCGAGAAGGCTCCTCAGAA+TGG | 0.527606 | 7_2:-80619515 | Msa1080880:CDS |
| ATTGGTTTCTTTCATCCAGA+AGG | 0.527618 | 7_2:-80619375 | Msa1080880:CDS |
| TTACTACATCATTGACACAT+TGG | 0.528944 | 7_2:-80619187 | Msa1080880:CDS |
| GCAGATATCAATTAGCTTGG+TGG | 0.531349 | 7_2:-80620625 | Msa1080880:intron |
| GAAGAGGAGGTTGTCTGCAG+AGG | 0.532288 | 7_2:-80618958 | Msa1080880:CDS |
| CGATTTAGAAGATTCAGACC+GGG | 0.534030 | 7_2:-80620349 | Msa1080880:CDS |
| TCTTGTGAAATTTCTTGCGA+CGG | 0.536971 | 7_2:+80621774 | None:intergenic |
| TACAGGTCTCATTGTCGCGT+AGG | 0.541505 | 7_2:+80619487 | None:intergenic |
| GGAATGAGGATTCAAGTGTT+GGG | 0.544126 | 7_2:-80620326 | Msa1080880:CDS |
| TGCGACGGAGCCTCGTCGCA+AGG | 0.545916 | 7_2:+80621789 | None:intergenic |
| GTCCCCACCGTCTTCAGCAT+AGG | 0.550462 | 7_2:+80620050 | None:intergenic |
| ATCTTCTAGGAAATCAGAAA+AGG | 0.550812 | 7_2:-80620463 | Msa1080880:CDS |
| CGTTCCTGTGTCATCACCAT+CGG | 0.552222 | 7_2:-80620577 | Msa1080880:CDS |
| CACTACTTCCTTCTTCTCCA+CGG | 0.552441 | 7_2:+80620436 | None:intergenic |
| AGATGATGAGGTGGCGTCCA+TGG | 0.552992 | 7_2:-80621945 | Msa1080880:CDS |
| ATTTCTTCTGATTGAGCCGA+TGG | 0.553305 | 7_2:+80620561 | None:intergenic |
| AAGAGGAGGTTGTCTGCAGA+GGG | 0.554332 | 7_2:-80618957 | Msa1080880:CDS |
| CGCAAGAAATTTCACAAGAG+AGG | 0.555370 | 7_2:-80621770 | Msa1080880:CDS |
| GATCTTTCTGCAATAAAAGC+CGG | 0.555462 | 7_2:-80620519 | Msa1080880:CDS |
| CACTTGAATCCTCATTCCCC+CGG | 0.560381 | 7_2:+80620331 | None:intergenic |
| GATTGCTGTGCAGAATCTCC+AGG | 0.563505 | 7_2:+80620785 | None:intergenic |
| TCAATTTGTAGTCTTTGATG+AGG | 0.565505 | 7_2:+80618838 | None:intergenic |
| GGTAGCAAGTATTCTAGGAG+TGG | 0.569478 | 7_2:-80620414 | Msa1080880:CDS |
| GCCTAAAGAAGTTATCGGTA+AGG | 0.570571 | 7_2:-80619004 | Msa1080880:CDS |
| ACGATTTAGAAGATTCAGAC+CGG | 0.570676 | 7_2:-80620350 | Msa1080880:CDS |
| ACTATTGCATGCCTGATGCT+GGG | 0.573068 | 7_2:-80620194 | Msa1080880:CDS |
| ACAATGTCTTGTTTCATCCG+TGG | 0.573090 | 7_2:-80621654 | Msa1080880:CDS |
| TCGAATTAGACTGTCGAACT+GGG | 0.575257 | 7_2:+80619533 | None:intergenic |
| TGGATGAAAGAAACCAATGA+AGG | 0.576485 | 7_2:+80619380 | None:intergenic |
| AAACCAATGAAGGATTTGCC+AGG | 0.576669 | 7_2:+80619390 | None:intergenic |
| AAGGAAGAAAGTGTTGACTT+AGG | 0.578642 | 7_2:+80621808 | None:intergenic |
| TGATGAATCCATCTCTTCGA+AGG | 0.579333 | 7_2:-80619989 | Msa1080880:intron |
| TTCTATTGAAGAGCAAGAAG+AGG | 0.579561 | 7_2:-80618974 | Msa1080880:CDS |
| TCCTGCGGTGGAAGCAACCA+TGG | 0.581159 | 7_2:-80618770 | Msa1080880:CDS |
| CAAAGCGCAGCATACTTCCA+TGG | 0.581184 | 7_2:-80620113 | Msa1080880:CDS |
| AAAGAAGTTATCGGTAAGGA+AGG | 0.581404 | 7_2:-80619000 | Msa1080880:CDS |
| AAAGAGATCACTAGCCGCGA+TGG | 0.581709 | 7_2:-80619699 | Msa1080880:CDS |
| GAAAACATGAGGTCCACCAT+TGG | 0.581782 | 7_2:+80619260 | None:intergenic |
| GGAGGTTGTCTGCAGAGGGA+AGG | 0.583123 | 7_2:-80618953 | Msa1080880:CDS |
| TTCTAGGAAATCAGAAAAGG+CGG | 0.583702 | 7_2:-80620460 | Msa1080880:CDS |
| AGGCCTATGCTGAAGACGGT+GGG | 0.586237 | 7_2:-80620053 | Msa1080880:CDS |
| GAAAGATTTGAGTTTCTTCG+CGG | 0.588708 | 7_2:-80619342 | Msa1080880:CDS |
| AATGGACTTACACAGAGTAA+AGG | 0.590140 | 7_2:+80620761 | None:intergenic |
| TATTGAAGAGCAAGAAGAGG+AGG | 0.590253 | 7_2:-80618971 | Msa1080880:CDS |
| GCGCTTCAGATTAAATGGAA+AGG | 0.591516 | 7_2:-80621832 | Msa1080880:CDS |
| TTACCGATAACTTCTTTAGG+CGG | 0.596458 | 7_2:+80619006 | None:intergenic |
| TCAGCCTGCAACTCTCTGAT+GGG | 0.597277 | 7_2:+80618889 | None:intergenic |
| TCTAGGAAATCAGAAAAGGC+GGG | 0.597356 | 7_2:-80620459 | Msa1080880:CDS |
| ACTACATCATTGACACATTG+GGG | 0.597911 | 7_2:-80619185 | Msa1080880:CDS |
| CGTGGAGAAGAAGGAAGTAG+TGG | 0.598459 | 7_2:-80620435 | Msa1080880:CDS |
| GCGTAGGTTTCTCCATTCTG+AGG | 0.601252 | 7_2:+80619503 | None:intergenic |
| AGATTGAAAGCGATTTCCCA+CGG | 0.606573 | 7_2:+80621637 | None:intergenic |
| TGATCAACGCAGTGAACGCG+CGG | 0.615289 | 7_2:-80619637 | Msa1080880:CDS |
| CATCAGGCATGCAATAGTTG+TGG | 0.616829 | 7_2:+80620199 | None:intergenic |
| GGAGTTGTTGTTGATAAACA+AGG | 0.618758 | 7_2:+80618790 | None:intergenic |
| CTGTCGAACTGGGACTTTAG+GGG | 0.621458 | 7_2:+80619543 | None:intergenic |
| GAACATGAGTGTCTCACCAA+TGG | 0.622666 | 7_2:-80619276 | Msa1080880:CDS |
| TTGGCCTCTGCAAATGCTGG+AGG | 0.623212 | 7_2:-80620282 | Msa1080880:CDS |
| ACACTTTCTTCCTTGCGACG+AGG | 0.625009 | 7_2:-80621799 | Msa1080880:CDS |
| CAACTCTCTGATGGGAATTG+CGG | 0.626152 | 7_2:+80618897 | None:intergenic |
| ATCAACAACAACTCCTGCGG+TGG | 0.626386 | 7_2:-80618782 | Msa1080880:CDS |
| TAATGGTGGTGAAGATGATG+AGG | 0.627803 | 7_2:-80621957 | Msa1080880:CDS |
| CGACGAAACCAGCAGAAACG+TGG | 0.635377 | 7_2:+80621731 | None:intergenic |
| CATGAGTGTCTCACCAATGG+TGG | 0.635662 | 7_2:-80619273 | Msa1080880:CDS |
| GGCCTATGCTGAAGACGGTG+GGG | 0.638192 | 7_2:-80620052 | Msa1080880:CDS |
| AACATTTGGGACGAGATCAG+TGG | 0.639738 | 7_2:-80619303 | Msa1080880:CDS |
| AAGGCCTATGCTGAAGACGG+TGG | 0.640513 | 7_2:-80620054 | Msa1080880:CDS |
| CAGATTCAGAGCTAAGCTGT+CGG | 0.643095 | 7_2:+80620010 | None:intergenic |
| GATTTAGAAGATTCAGACCG+GGG | 0.648372 | 7_2:-80620348 | Msa1080880:CDS |
| TTCGACAGTCTAATTCGAGA+AGG | 0.648846 | 7_2:-80619528 | Msa1080880:CDS |
| CTAGATCAAAATGCCCATCA+GGG | 0.650970 | 7_2:+80619454 | None:intergenic |
| GAATCTCCAGGATTTGTGAG+TGG | 0.651109 | 7_2:+80620797 | None:intergenic |
| CAACTAACAATGAAAACATG+AGG | 0.651723 | 7_2:+80619249 | None:intergenic |
| TTTATCAACAACAACTCCTG+CGG | 0.662831 | 7_2:-80618785 | Msa1080880:CDS |
| ATAAGGCTCAGAAGAAGACG+TGG | 0.663268 | 7_2:+80620149 | None:intergenic |
| TCATCCAGAAGGAATGGACG+AGG | 0.665308 | 7_2:-80619364 | Msa1080880:CDS |
| TGGTGGTGAAGATGATGAGG+TGG | 0.670788 | 7_2:-80621954 | Msa1080880:CDS |
| TGGAGGAAGAGGAAGTTTAG+GGG | 0.671003 | 7_2:-80620093 | Msa1080880:CDS |
| TTGCCAGGAACAACAGAGAG+CGG | 0.680350 | 7_2:+80619405 | None:intergenic |
| TCAACGCAGTGAACGCGCGG+CGG | 0.681053 | 7_2:-80619634 | Msa1080880:CDS |
| TGATCCTCCAGCATTTGCAG+AGG | 0.682683 | 7_2:+80620278 | None:intergenic |
| TGAGCCGATGGTGATGACAC+AGG | 0.701956 | 7_2:+80620573 | None:intergenic |
| TCACTAGTTTCACAAGACTG+GGG | 0.702314 | 7_2:-80619778 | Msa1080880:intron |
| ATTTAGAAGATTCAGACCGG+GGG | 0.706186 | 7_2:-80620347 | Msa1080880:CDS |
| CTACATCATTGACACATTGG+GGG | 0.708648 | 7_2:-80619184 | Msa1080880:CDS |
| CAAGCTTCATGTGACCATCG+CGG | 0.715114 | 7_2:+80619685 | None:intergenic |
| AGCGCAGCATACTTCCATGG+AGG | 0.725294 | 7_2:-80620110 | Msa1080880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GGATTTTTTAAATAAAATAT+TGG | - | chr7_2:80619511-80619530 | Msa1080880:CDS | 10.0% |
| !! | TTATATTAGAAAAATCATAA+TGG | + | chr7_2:80619603-80619622 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAATGTAATTGTA+GGG | - | chr7_2:80619752-80619771 | Msa1080880:CDS | 10.0% |
| !!! | TTTTATTGTTTTTCTTTTGT+TGG | - | chr7_2:80619231-80619250 | Msa1080880:CDS | 15.0% |
| !!! | TTTATTGTTTTTCTTTTGTT+GGG | - | chr7_2:80619232-80619251 | Msa1080880:CDS | 15.0% |
| !!! | TTTTTATGTTTCCTAATATT+TGG | - | chr7_2:80619329-80619348 | Msa1080880:CDS | 15.0% |
| !!! | GTTTTTTTAAATGTAATTGT+AGG | - | chr7_2:80619751-80619770 | Msa1080880:CDS | 15.0% |
| !! | ATAATAAACTATCAACATTA+TGG | - | chr7_2:80619975-80619994 | Msa1080880:intron | 15.0% |
| !! | AAAGAAAAAGAAAGAAAAGA+TGG | + | chr7_2:80619100-80619119 | None:intergenic | 20.0% |
| !! | ACAAAAACAGATCAAATAAA+AGG | + | chr7_2:80619310-80619329 | None:intergenic | 20.0% |
| !!! | TTTTTATCATTTGATGATTG+AGG | + | chr7_2:80621600-80621619 | None:intergenic | 20.0% |
| ! | CTTAATGTAAAGAAACTCAT+TGG | - | chr7_2:80618789-80618808 | Msa1080880:CDS | 25.0% |
| ! | AAACAGATCAAATAAAAGGA+CGG | + | chr7_2:80619306-80619325 | None:intergenic | 25.0% |
| ! | TTTGACAAAAAAAACGAAGT+AGG | - | chr7_2:80619490-80619509 | Msa1080880:CDS | 25.0% |
| !!! | TTATTTAATCGGTTAGTTTG+AGG | - | chr7_2:80619637-80619656 | Msa1080880:CDS | 25.0% |
| ! | ATGACAATAAATTACAAGAG+AGG | + | chr7_2:80619951-80619970 | None:intergenic | 25.0% |
| !! | CAACTTTGAGAATGAAAAAA+TGG | + | chr7_2:80621461-80621480 | None:intergenic | 25.0% |
| ! | TCAAATGATAAAAAAGCAAC+TGG | - | chr7_2:80621606-80621625 | Msa1080880:intron | 25.0% |
| TTTGAAGAAGATTGACGTAT+AGG | + | chr7_2:80618822-80618841 | None:intergenic | 30.0% | |
| AATTAGCGCTTCAGATTAAA+TGG | - | chr7_2:80618841-80618860 | Msa1080880:CDS | 30.0% | |
| CATCATCTTTGTAATCTCAA+TGG | - | chr7_2:80618990-80619009 | Msa1080880:CDS | 30.0% | |
| ! | TTTTCTTTTGTTGGGTTTGT+AGG | - | chr7_2:80619240-80619259 | Msa1080880:CDS | 30.0% |
| TTGTAGGATGGATGAAAATT+TGG | - | chr7_2:80619256-80619275 | Msa1080880:CDS | 30.0% | |
| AATTTCCAGGACCAAATATT+AGG | + | chr7_2:80619343-80619362 | None:intergenic | 30.0% | |
| ! | TGTTGAAGAGAAAGTTGATT+AGG | + | chr7_2:80619378-80619397 | None:intergenic | 30.0% |
| TCTCTTCAACAATGAAGTTA+AGG | - | chr7_2:80619387-80619406 | Msa1080880:CDS | 30.0% | |
| GTTAAGGTCATTAATTGAAG+AGG | - | chr7_2:80619403-80619422 | Msa1080880:CDS | 30.0% | |
| ATGTAATTGTAGGGATTCAA+TGG | - | chr7_2:80619761-80619780 | Msa1080880:CDS | 30.0% | |
| AATGCAGATATCAATTAGCT+TGG | - | chr7_2:80620050-80620069 | Msa1080880:CDS | 30.0% | |
| GAAATTACAATGACAGAGAA+AGG | - | chr7_2:80620135-80620154 | Msa1080880:CDS | 30.0% | |
| TGAAAAACCTTACTTTCCTA+AGG | + | chr7_2:80620185-80620204 | None:intergenic | 30.0% | |
| TCACAGAATTTGTATCTTCT+AGG | - | chr7_2:80620202-80620221 | Msa1080880:CDS | 30.0% | |
| ! | ATCTTCTAGGAAATCAGAAA+AGG | - | chr7_2:80620215-80620234 | Msa1080880:CDS | 30.0% |
| TTCATTCCATTATGGAACTT+TGG | - | chr7_2:80620377-80620396 | Msa1080880:CDS | 30.0% | |
| ATTGTGATGACAAAGACATT+TGG | - | chr7_2:80620451-80620470 | Msa1080880:CDS | 30.0% | |
| TTGTGATGACAAAGACATTT+GGG | - | chr7_2:80620452-80620471 | Msa1080880:CDS | 30.0% | |
| TTTGCACTTTGTGAGAAATA+AGG | + | chr7_2:80620549-80620568 | None:intergenic | 30.0% | |
| !! | GAGATGATATGTTTGTTGTT+GGG | - | chr7_2:80620944-80620963 | Msa1080880:intron | 30.0% |
| AATGTCTTTCGACAACATTT+GGG | - | chr7_2:80621362-80621381 | Msa1080880:intron | 30.0% | |
| CAACTAACAATGAAAACATG+AGG | + | chr7_2:80621432-80621451 | None:intergenic | 30.0% | |
| ! | CTCATGTTTTCATTGTTAGT+TGG | - | chr7_2:80621430-80621449 | Msa1080880:intron | 30.0% |
| TTACTACATCATTGACACAT+TGG | - | chr7_2:80621491-80621510 | Msa1080880:intron | 30.0% | |
| TACTACATCATTGACACATT+GGG | - | chr7_2:80621492-80621511 | Msa1080880:intron | 30.0% | |
| AATGATAAAAAAGCAACTGG+TGG | - | chr7_2:80621609-80621628 | Msa1080880:intron | 30.0% | |
| TCAATTTGTAGTCTTTGATG+AGG | + | chr7_2:80621843-80621862 | None:intergenic | 30.0% | |
| !! | AAGGAAGAAAGTGTTGACTT+AGG | + | chr7_2:80618873-80618892 | None:intergenic | 35.0% |
| TCTTGTGAAATTTCTTGCGA+CGG | + | chr7_2:80618907-80618926 | None:intergenic | 35.0% | |
| ATTTGGATGATTCTGTGTGT+TGG | - | chr7_2:80619273-80619292 | Msa1080880:CDS | 35.0% | |
| TTTGGATGATTCTGTGTGTT+GGG | - | chr7_2:80619274-80619293 | Msa1080880:CDS | 35.0% | |
| TGTTTCCTAATATTTGGTCC+TGG | - | chr7_2:80619335-80619354 | Msa1080880:CDS | 35.0% | |
| AAGGTCATTAATTGAAGAGG+TGG | - | chr7_2:80619406-80619425 | Msa1080880:CDS | 35.0% | |
| TTAATTGAAGAGGTGGAGAT+TGG | - | chr7_2:80619413-80619432 | Msa1080880:CDS | 35.0% | |
| !! | CTTTCCCTTTCAGTTTTATG+CGG | - | chr7_2:80619536-80619555 | Msa1080880:CDS | 35.0% |
| ACTACCGCATAAAACTGAAA+GGG | + | chr7_2:80619543-80619562 | None:intergenic | 35.0% | |
| TACTACCGCATAAAACTGAA+AGG | + | chr7_2:80619544-80619563 | None:intergenic | 35.0% | |
| AATGGAAGCCCAAGAAAAAA+GGG | - | chr7_2:80619779-80619798 | Msa1080880:intron | 35.0% | |
| !!! | CAACAGTACCCTTTTTTCTT+GGG | + | chr7_2:80619790-80619809 | None:intergenic | 35.0% |
| !!! | ACAACAGTACCCTTTTTTCT+TGG | + | chr7_2:80619791-80619810 | None:intergenic | 35.0% |
| !! | AGAAAAAAGGGTACTGTTGT+TGG | - | chr7_2:80619791-80619810 | Msa1080880:intron | 35.0% |
| ! | TCAATTGATCAGACCAGTTT+TGG | - | chr7_2:80619848-80619867 | Msa1080880:intron | 35.0% |
| TGGAATGTTCAAACCAAAAC+TGG | + | chr7_2:80619864-80619883 | None:intergenic | 35.0% | |
| ! | AATGGACTTACACAGAGTAA+AGG | + | chr7_2:80619920-80619939 | None:intergenic | 35.0% |
| ACAAGAGAGGATTAACTGAA+TGG | + | chr7_2:80619938-80619957 | None:intergenic | 35.0% | |
| GATCTTTCTGCAATAAAAGC+CGG | - | chr7_2:80620159-80620178 | Msa1080880:CDS | 35.0% | |
| ! | TTCTAGGAAATCAGAAAAGG+CGG | - | chr7_2:80620218-80620237 | Msa1080880:CDS | 35.0% |
| ACGATTTAGAAGATTCAGAC+CGG | - | chr7_2:80620328-80620347 | Msa1080880:CDS | 35.0% | |
| GTTGGGAATTCATTCCATTA+TGG | - | chr7_2:80620369-80620388 | Msa1080880:CDS | 35.0% | |
| ATCACAATTCATTCTCGTGT+TGG | + | chr7_2:80620439-80620458 | None:intergenic | 35.0% | |
| !!! | GCATAGGCCTTTTTTAACAA+TGG | + | chr7_2:80620615-80620634 | None:intergenic | 35.0% |
| ! | TTCACTAGTTTCACAAGACT+GGG | - | chr7_2:80620899-80620918 | Msa1080880:CDS | 35.0% |
| !! | GGAGATGATATGTTTGTTGT+TGG | - | chr7_2:80620943-80620962 | Msa1080880:intron | 35.0% |
| !! | ATATGTTTGTTGTTGGGAGT+TGG | - | chr7_2:80620950-80620969 | Msa1080880:intron | 35.0% |
| !! | TATGTTTGTTGTTGGGAGTT+GGG | - | chr7_2:80620951-80620970 | Msa1080880:intron | 35.0% |
| GCATGAAATCATGATAGTTC+TGG | + | chr7_2:80621116-80621135 | None:intergenic | 35.0% | |
| ACAATGAGACCTGTAGAAAT+CGG | - | chr7_2:80621199-80621218 | Msa1080880:intron | 35.0% | |
| TGGATGAAAGAAACCAATGA+AGG | + | chr7_2:80621301-80621320 | None:intergenic | 35.0% | |
| ! | ATTGGTTTCTTTCATCCAGA+AGG | - | chr7_2:80621303-80621322 | Msa1080880:intron | 35.0% |
| TTTCTTTCATCCAGAAGGAA+TGG | - | chr7_2:80621308-80621327 | Msa1080880:intron | 35.0% | |
| ! | GAAAGATTTGAGTTTCTTCG+CGG | - | chr7_2:80621336-80621355 | Msa1080880:intron | 35.0% |
| CAATGTCTTTCGACAACATT+TGG | - | chr7_2:80621361-80621380 | Msa1080880:intron | 35.0% | |
| ACTACATCATTGACACATTG+GGG | - | chr7_2:80621493-80621512 | Msa1080880:intron | 35.0% | |
| !! | CTGTGTTGCTGTCAAATTTT+AGG | + | chr7_2:80621554-80621573 | None:intergenic | 35.0% |
| TTACCGATAACTTCTTTAGG+CGG | + | chr7_2:80621675-80621694 | None:intergenic | 35.0% | |
| TCCTTACCGATAACTTCTTT+AGG | + | chr7_2:80621678-80621697 | None:intergenic | 35.0% | |
| AAAGAAGTTATCGGTAAGGA+AGG | - | chr7_2:80621678-80621697 | Msa1080880:CDS | 35.0% | |
| TTCTATTGAAGAGCAAGAAG+AGG | - | chr7_2:80621704-80621723 | Msa1080880:CDS | 35.0% | |
| AGAGTACATCAAAAGCTTCT+TGG | - | chr7_2:80621758-80621777 | Msa1080880:CDS | 35.0% | |
| ! | GGAGTTGTTGTTGATAAACA+AGG | + | chr7_2:80621891-80621910 | None:intergenic | 35.0% |
| TTTATCAACAACAACTCCTG+CGG | - | chr7_2:80621893-80621912 | Msa1080880:CDS | 35.0% | |
| !!! | TGATACTTTTTGGTGACGAG+TGG | + | chr7_2:80618762-80618781 | None:intergenic | 40.0% |
| !! | TCACCAAAAAGTATCACGTC+AGG | - | chr7_2:80618766-80618785 | Msa1080880:CDS | 40.0% |
| ! | AAGCCTGACGTGATACTTTT+TGG | + | chr7_2:80618772-80618791 | None:intergenic | 40.0% |
| GCGCTTCAGATTAAATGGAA+AGG | - | chr7_2:80618846-80618865 | Msa1080880:CDS | 40.0% | |
| CGCAAGAAATTTCACAAGAG+AGG | - | chr7_2:80618908-80618927 | Msa1080880:CDS | 40.0% | |
| !! | ACAATGTCTTGTTTCATCCG+TGG | - | chr7_2:80619024-80619043 | Msa1080880:CDS | 40.0% |
| !! | CAATGTCTTGTTTCATCCGT+GGG | - | chr7_2:80619025-80619044 | Msa1080880:CDS | 40.0% |
| AGATTGAAAGCGATTTCCCA+CGG | + | chr7_2:80619044-80619063 | None:intergenic | 40.0% | |
| ! | CTTTTGTTGGGTTTGTAGGA+TGG | - | chr7_2:80619244-80619263 | Msa1080880:CDS | 40.0% |
| GTGTGACACAACAAATTTCC+AGG | + | chr7_2:80619356-80619375 | None:intergenic | 40.0% | |
| ! | GCGGTAGTAGTTGACTTATT+TGG | - | chr7_2:80619555-80619574 | Msa1080880:CDS | 40.0% |
| CAATGGAAGCCCAAGAAAAA+AGG | - | chr7_2:80619778-80619797 | Msa1080880:intron | 40.0% | |
| AACATTCCACTCACAAATCC+TGG | - | chr7_2:80619875-80619894 | Msa1080880:intron | 40.0% | |
| ! | GCAGATATCAATTAGCTTGG+TGG | - | chr7_2:80620053-80620072 | Msa1080880:CDS | 40.0% |
| ATTTCTTCTGATTGAGCCGA+TGG | + | chr7_2:80620120-80620139 | None:intergenic | 40.0% | |
| AAACCTTACTTTCCTAAGGC+CGG | + | chr7_2:80620181-80620200 | None:intergenic | 40.0% | |
| TCTAGGAAATCAGAAAAGGC+GGG | - | chr7_2:80620219-80620238 | Msa1080880:CDS | 40.0% | |
| GTAGTGGTAGCAAGTATTCT+AGG | - | chr7_2:80620259-80620278 | Msa1080880:CDS | 40.0% | |
| CGATTTAGAAGATTCAGACC+GGG | - | chr7_2:80620329-80620348 | Msa1080880:CDS | 40.0% | |
| GATTTAGAAGATTCAGACCG+GGG | - | chr7_2:80620330-80620349 | Msa1080880:CDS | 40.0% | |
| ATTTAGAAGATTCAGACCGG+GGG | - | chr7_2:80620331-80620350 | Msa1080880:CDS | 40.0% | |
| GGAATGAGGATTCAAGTGTT+GGG | - | chr7_2:80620352-80620371 | Msa1080880:CDS | 40.0% | |
| ATGGAGGAAGAGGAAGTTTA+GGG | - | chr7_2:80620584-80620603 | Msa1080880:CDS | 40.0% | |
| GGGAGAGCCATTGTTAAAAA+AGG | - | chr7_2:80620605-80620624 | Msa1080880:CDS | 40.0% | |
| AAAAAGGCCTATGCTGAAGA+CGG | - | chr7_2:80620621-80620640 | Msa1080880:CDS | 40.0% | |
| TGATGAATCCATCTCTTCGA+AGG | - | chr7_2:80620689-80620708 | Msa1080880:intron | 40.0% | |
| AGTTCTTACCTTCGAAGAGA+TGG | + | chr7_2:80620700-80620719 | None:intergenic | 40.0% | |
| ! | GTTCACTAGTTTCACAAGAC+TGG | - | chr7_2:80620898-80620917 | Msa1080880:CDS | 40.0% |
| ! | TCACTAGTTTCACAAGACTG+GGG | - | chr7_2:80620900-80620919 | Msa1080880:CDS | 40.0% |
| GATACGCCAATCTCTGAATT+CGG | - | chr7_2:80620922-80620941 | Msa1080880:intron | 40.0% | |
| TCATCTCCGAATTCAGAGAT+TGG | + | chr7_2:80620931-80620950 | None:intergenic | 40.0% | |
| ! | TTCACTGCGTTGATCAATTG+AGG | + | chr7_2:80621037-80621056 | None:intergenic | 40.0% |
| TTGTTGCCGTAATTGCTGAT+TGG | - | chr7_2:80621088-80621107 | Msa1080880:intron | 40.0% | |
| CTGGAACCAATCAGCAATTA+CGG | + | chr7_2:80621097-80621116 | None:intergenic | 40.0% | |
| TCGAATTAGACTGTCGAACT+GGG | + | chr7_2:80621148-80621167 | None:intergenic | 40.0% | |
| TTCGACAGTCTAATTCGAGA+AGG | - | chr7_2:80621150-80621169 | Msa1080880:intron | 40.0% | |
| CTAGATCAAAATGCCCATCA+GGG | + | chr7_2:80621227-80621246 | None:intergenic | 40.0% | |
| TCTAGATCAAAATGCCCATC+AGG | + | chr7_2:80621228-80621247 | None:intergenic | 40.0% | |
| AAACCAATGAAGGATTTGCC+AGG | + | chr7_2:80621291-80621310 | None:intergenic | 40.0% | |
| CTACATCATTGACACATTGG+GGG | - | chr7_2:80621494-80621513 | Msa1080880:intron | 40.0% | |
| ATAAAAAAGCAACTGGTGGC+TGG | - | chr7_2:80621613-80621632 | Msa1080880:intron | 40.0% | |
| AAGCCGCCTAAAGAAGTTAT+CGG | - | chr7_2:80621669-80621688 | Msa1080880:CDS | 40.0% | |
| GCCTAAAGAAGTTATCGGTA+AGG | - | chr7_2:80621674-80621693 | Msa1080880:CDS | 40.0% | |
| TATTGAAGAGCAAGAAGAGG+AGG | - | chr7_2:80621707-80621726 | Msa1080880:CDS | 40.0% | |
| !!! | TACTTTTTGGTGACGAGTGG+CGG | + | chr7_2:80618759-80618778 | None:intergenic | 45.0% |
| TTTCACAAGAGAGGCTGTCA+TGG | - | chr7_2:80618917-80618936 | Msa1080880:CDS | 45.0% | |
| GAATCTCCAGGATTTGTGAG+TGG | + | chr7_2:80619884-80619903 | None:intergenic | 45.0% | |
| CACTACTTCCTTCTTCTCCA+CGG | + | chr7_2:80620245-80620264 | None:intergenic | 45.0% | |
| ! | GGTAGCAAGTATTCTAGGAG+TGG | - | chr7_2:80620264-80620283 | Msa1080880:CDS | 45.0% |
| GGGAATGAGGATTCAAGTGT+TGG | - | chr7_2:80620351-80620370 | Msa1080880:CDS | 45.0% | |
| CAGAGGCCAAAGTTCCATAA+TGG | + | chr7_2:80620386-80620405 | None:intergenic | 45.0% | |
| CATCAGGCATGCAATAGTTG+TGG | + | chr7_2:80620482-80620501 | None:intergenic | 45.0% | |
| AACTATTGCATGCCTGATGC+TGG | - | chr7_2:80620483-80620502 | Msa1080880:CDS | 45.0% | |
| ACTATTGCATGCCTGATGCT+GGG | - | chr7_2:80620484-80620503 | Msa1080880:CDS | 45.0% | |
| ATAAGGCTCAGAAGAAGACG+TGG | + | chr7_2:80620532-80620551 | None:intergenic | 45.0% | |
| CTAAACTTCCTCTTCCTCCA+TGG | + | chr7_2:80620585-80620604 | None:intergenic | 45.0% | |
| CATGGAGGAAGAGGAAGTTT+AGG | - | chr7_2:80620583-80620602 | Msa1080880:CDS | 45.0% | |
| TGGAGGAAGAGGAAGTTTAG+GGG | - | chr7_2:80620585-80620604 | Msa1080880:CDS | 45.0% | |
| CAGATTCAGAGCTAAGCTGT+CGG | + | chr7_2:80620671-80620690 | None:intergenic | 45.0% | |
| ACTGTCGAACTGGGACTTTA+GGG | + | chr7_2:80621139-80621158 | None:intergenic | 45.0% | |
| CTCGAATTAGACTGTCGAAC+TGG | + | chr7_2:80621149-80621168 | None:intergenic | 45.0% | |
| ! | ATCAGGGAACCGATTTCTAC+AGG | + | chr7_2:80621211-80621230 | None:intergenic | 45.0% |
| ! | TGTAGAAATCGGTTCCCTGA+TGG | - | chr7_2:80621210-80621229 | Msa1080880:intron | 45.0% |
| ! | GTAGAAATCGGTTCCCTGAT+GGG | - | chr7_2:80621211-80621230 | Msa1080880:intron | 45.0% |
| !! | GCGGACGTATTTTTGCTTCA+AGG | + | chr7_2:80621257-80621276 | None:intergenic | 45.0% |
| GTTCCTGGCAAATCCTTCAT+TGG | - | chr7_2:80621285-80621304 | Msa1080880:intron | 45.0% | |
| ! | AACATTTGGGACGAGATCAG+TGG | - | chr7_2:80621375-80621394 | Msa1080880:intron | 45.0% |
| GAACATGAGTGTCTCACCAA+TGG | - | chr7_2:80621402-80621421 | Msa1080880:intron | 45.0% | |
| GAAAACATGAGGTCCACCAT+TGG | + | chr7_2:80621421-80621440 | None:intergenic | 45.0% | |
| CAACTCTCTGATGGGAATTG+CGG | + | chr7_2:80621784-80621803 | None:intergenic | 45.0% | |
| AATTCCCATCAGAGAGTTGC+AGG | - | chr7_2:80621785-80621804 | Msa1080880:CDS | 45.0% | |
| !!! | TAAAGATTAATTTTTTTAAT+TGG | - | chr7_2:80619182-80619201 | Msa1080880:CDS | 5.0% |
| !!! | AAAGATTAATTTTTTTAATT+GGG | - | chr7_2:80619183-80619202 | Msa1080880:CDS | 5.0% |
| !!! | TTTATTTATTGTTATTTAAT+CGG | - | chr7_2:80619626-80619645 | Msa1080880:CDS | 5.0% |
| ! | TGGTGGTGAAGATGATGAGG+TGG | - | chr7_2:80618724-80618743 | Msa1080880:CDS | 50.0% |
| ACACTTTCTTCCTTGCGACG+AGG | - | chr7_2:80618879-80618898 | Msa1080880:CDS | 50.0% | |
| GAATACGACCACGTTTCTGC+TGG | - | chr7_2:80618939-80618958 | Msa1080880:CDS | 50.0% | |
| GATTGCTGTGCAGAATCTCC+AGG | + | chr7_2:80619896-80619915 | None:intergenic | 50.0% | |
| CGTTCCTGTGTCATCACCAT+CGG | - | chr7_2:80620101-80620120 | Msa1080880:CDS | 50.0% | |
| CTGCAATAAAAGCCGGCCTT+AGG | - | chr7_2:80620166-80620185 | Msa1080880:CDS | 50.0% | |
| AAGCCGGCCTTAGGAAAGTA+AGG | - | chr7_2:80620175-80620194 | Msa1080880:CDS | 50.0% | |
| CGTGGAGAAGAAGGAAGTAG+TGG | - | chr7_2:80620243-80620262 | Msa1080880:CDS | 50.0% | |
| CACTTGAATCCTCATTCCCC+CGG | + | chr7_2:80620350-80620369 | None:intergenic | 50.0% | |
| ACTTTGGCCTCTGCAAATGC+TGG | - | chr7_2:80620393-80620412 | Msa1080880:CDS | 50.0% | |
| TGATCCTCCAGCATTTGCAG+AGG | + | chr7_2:80620403-80620422 | None:intergenic | 50.0% | |
| CAAAGCGCAGCATACTTCCA+TGG | - | chr7_2:80620565-80620584 | Msa1080880:CDS | 50.0% | |
| GCATACTTCCATGGAGGAAG+AGG | - | chr7_2:80620574-80620593 | Msa1080880:CDS | 50.0% | |
| AAAGAGATCACTAGCCGCGA+TGG | - | chr7_2:80620979-80620998 | Msa1080880:intron | 50.0% | |
| CAAGCTTCATGTGACCATCG+CGG | + | chr7_2:80620996-80621015 | None:intergenic | 50.0% | |
| CTGTCGAACTGGGACTTTAG+GGG | + | chr7_2:80621138-80621157 | None:intergenic | 50.0% | |
| GACTGTCGAACTGGGACTTT+AGG | + | chr7_2:80621140-80621159 | None:intergenic | 50.0% | |
| TTCGAGAAGGCTCCTCAGAA+TGG | - | chr7_2:80621163-80621182 | Msa1080880:intron | 50.0% | |
| GCGTAGGTTTCTCCATTCTG+AGG | + | chr7_2:80621178-80621197 | None:intergenic | 50.0% | |
| TACAGGTCTCATTGTCGCGT+AGG | + | chr7_2:80621194-80621213 | None:intergenic | 50.0% | |
| TTGCCAGGAACAACAGAGAG+CGG | + | chr7_2:80621276-80621295 | None:intergenic | 50.0% | |
| TCATCCAGAAGGAATGGACG+AGG | - | chr7_2:80621314-80621333 | Msa1080880:intron | 50.0% | |
| CTTTCCTCGTCCATTCCTTC+TGG | + | chr7_2:80621321-80621340 | None:intergenic | 50.0% | |
| CATGAGTGTCTCACCAATGG+TGG | - | chr7_2:80621405-80621424 | Msa1080880:intron | 50.0% | |
| TCATTGACACATTGGGGGAG+AGG | - | chr7_2:80621499-80621518 | Msa1080880:intron | 50.0% | |
| AAGAGGAGGTTGTCTGCAGA+GGG | - | chr7_2:80621721-80621740 | Msa1080880:CDS | 50.0% | |
| TCAGCCTGCAACTCTCTGAT+GGG | + | chr7_2:80621792-80621811 | None:intergenic | 50.0% | |
| ATCAGCCTGCAACTCTCTGA+TGG | + | chr7_2:80621793-80621812 | None:intergenic | 50.0% | |
| ATCAACAACAACTCCTGCGG+TGG | - | chr7_2:80621896-80621915 | Msa1080880:CDS | 50.0% | |
| AGATGATGAGGTGGCGTCCA+TGG | - | chr7_2:80618733-80618752 | Msa1080880:CDS | 55.0% | |
| CGACGAAACCAGCAGAAACG+TGG | + | chr7_2:80618950-80618969 | None:intergenic | 55.0% | |
| ! | TGAGCCGATGGTGATGACAC+AGG | + | chr7_2:80620108-80620127 | None:intergenic | 55.0% |
| AAATCAGAAAAGGCGGGCCG+TGG | - | chr7_2:80620225-80620244 | Msa1080880:CDS | 55.0% | |
| AGATTCAGACCGGGGGAATG+AGG | - | chr7_2:80620338-80620357 | Msa1080880:CDS | 55.0% | |
| TTGGCCTCTGCAAATGCTGG+AGG | - | chr7_2:80620396-80620415 | Msa1080880:CDS | 55.0% | |
| ATATGCGAACGCCCAGCATC+AGG | + | chr7_2:80620498-80620517 | None:intergenic | 55.0% | |
| TGATGCTGGGCGTTCGCATA+TGG | - | chr7_2:80620497-80620516 | Msa1080880:CDS | 55.0% | |
| AGCGCAGCATACTTCCATGG+AGG | - | chr7_2:80620568-80620587 | Msa1080880:CDS | 55.0% | |
| AAGGCCTATGCTGAAGACGG+TGG | - | chr7_2:80620624-80620643 | Msa1080880:CDS | 55.0% | |
| AGGCCTATGCTGAAGACGGT+GGG | - | chr7_2:80620625-80620644 | Msa1080880:intron | 55.0% | |
| TGATCAACGCAGTGAACGCG+CGG | - | chr7_2:80621041-80621060 | Msa1080880:intron | 55.0% | |
| TTGGGGGAGAGGCTTCATGA+AGG | - | chr7_2:80621510-80621529 | Msa1080880:intron | 55.0% | |
| GAAGAGGAGGTTGTCTGCAG+AGG | - | chr7_2:80621720-80621739 | Msa1080880:CDS | 55.0% | |
| TAGTGTGTCTGCTGCAGCCA+TGG | + | chr7_2:80621928-80621947 | None:intergenic | 55.0% | |
| GGCCTATGCTGAAGACGGTG+GGG | - | chr7_2:80620626-80620645 | Msa1080880:intron | 60.0% | |
| GTCCCCACCGTCTTCAGCAT+AGG | + | chr7_2:80620631-80620650 | None:intergenic | 60.0% | |
| CGTCCGCTCTCTGTTGTTCC+TGG | - | chr7_2:80621270-80621289 | Msa1080880:intron | 60.0% | |
| GGAGGTTGTCTGCAGAGGGA+AGG | - | chr7_2:80621725-80621744 | Msa1080880:CDS | 60.0% | |
| TCCTGCGGTGGAAGCAACCA+TGG | - | chr7_2:80621908-80621927 | Msa1080880:CDS | 60.0% | |
| !! | TTGGTGACGAGTGGCGGCCA+TGG | + | chr7_2:80618753-80618772 | None:intergenic | 65.0% |
| AAGGCGGGCCGTGGAGAAGA+AGG | - | chr7_2:80620234-80620253 | Msa1080880:CDS | 65.0% | |
| TCAACGCAGTGAACGCGCGG+CGG | - | chr7_2:80621044-80621063 | Msa1080880:intron | 65.0% | |
| GCCATGGTTGCTTCCACCGC+AGG | + | chr7_2:80621912-80621931 | None:intergenic | 65.0% | |
| TGCGACGGAGCCTCGTCGCA+AGG | + | chr7_2:80618892-80618911 | None:intergenic | 70.0% | |
| CAACGCAGTGAACGCGCGGC+GGG | - | chr7_2:80621045-80621064 | Msa1080880:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 80618723 | 80621977 | 80618723 | ID=Msa1080880;Name=Msa1080880 |
| chr7_2 | mRNA | 80618723 | 80621977 | 80618723 | ID=Msa1080880-mRNA-1;Parent=Msa1080880;Name=Msa1080880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.66|0|1|1|1|4|0|742 |
| chr7_2 | exon | 80621630 | 80621977 | 80621630 | ID=Msa1080880-mRNA-1:exon:20473;Parent=Msa1080880-mRNA-1 |
| chr7_2 | exon | 80620772 | 80620927 | 80620772 | ID=Msa1080880-mRNA-1:exon:20472;Parent=Msa1080880-mRNA-1 |
| chr7_2 | exon | 80619990 | 80620643 | 80619990 | ID=Msa1080880-mRNA-1:exon:20471;Parent=Msa1080880-mRNA-1 |
| chr7_2 | exon | 80618723 | 80619793 | 80618723 | ID=Msa1080880-mRNA-1:exon:20470;Parent=Msa1080880-mRNA-1 |
| chr7_2 | CDS | 80621630 | 80621977 | 80621630 | ID=Msa1080880-mRNA-1:cds;Parent=Msa1080880-mRNA-1 |
| chr7_2 | CDS | 80620772 | 80620927 | 80620772 | ID=Msa1080880-mRNA-1:cds;Parent=Msa1080880-mRNA-1 |
| chr7_2 | CDS | 80619990 | 80620643 | 80619990 | ID=Msa1080880-mRNA-1:cds;Parent=Msa1080880-mRNA-1 |
| chr7_2 | CDS | 80618723 | 80619793 | 80618723 | ID=Msa1080880-mRNA-1:cds;Parent=Msa1080880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
