Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131930 | XP_013450234.1 | 95.828 | 743 | 29 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131930 | A0A072U3F5 | 95.828 | 743 | 29 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1080880 | Msa1131930 | 0.954420 | 3.082928e-112 | -8.615850e-47 |
| Msa1082410 | Msa1131930 | 0.814488 | 1.501710e-51 | -8.615850e-47 |
| Msa1119020 | Msa1131930 | 0.898346 | 5.806060e-77 | -8.615850e-47 |
| Msa1131930 | Msa1166740 | 0.879821 | 9.112422e-70 | -8.615850e-47 |
| Msa1131930 | Msa1380320 | 0.959431 | 1.957253e-117 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131930 | MtrunA17_Chr7g0267631 | 95.828 | 743 | 29 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1430 |
| Msa1131930 | MtrunA17_Chr1g0176961 | 59.073 | 777 | 259 | 17 | 1 | 742 | 1 | 753 | 0.0 | 845 |
| Msa1131930 | MtrunA17_Chr3g0137731 | 48.684 | 304 | 124 | 6 | 408 | 708 | 323 | 597 | 1.34e-81 | 272 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1131930 | AT3G11760.1 | 52.639 | 758 | 246 | 23 | 1 | 709 | 1 | 694 | 0.0 | 682 |
| Msa1131930 | AT5G04860.1 | 44.403 | 795 | 349 | 27 | 1 | 737 | 1 | 760 | 1.41e-177 | 528 |
| Msa1131930 | AT5G04860.2 | 47.209 | 627 | 267 | 20 | 150 | 737 | 8 | 609 | 4.13e-150 | 452 |
| Msa1131930 | AT2G10560.1 | 50.187 | 267 | 107 | 9 | 484 | 736 | 3 | 257 | 8.21e-68 | 225 |
| Msa1131930 | AT2G25460.2 | 44.300 | 307 | 122 | 4 | 408 | 711 | 282 | 542 | 1.24e-65 | 228 |
| Msa1131930 | AT2G25460.1 | 51.748 | 143 | 63 | 2 | 408 | 549 | 282 | 419 | 4.04e-29 | 121 |
Find 161 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTAGCGCTTCAGATTAAA+TGG | 0.216187 | 7_3:-84700040 | Msa1131930:CDS |
| CAATGTCTTTCGACAACATT+TGG | 0.231091 | 7_3:-84697508 | Msa1131930:CDS |
| TCACAGAATTTGTATCTTCT+AGG | 0.236134 | 7_3:-84698667 | Msa1131930:CDS |
| CAATGGAAGCCCAAGGAAAA+AGG | 0.238202 | 7_3:-84699091 | Msa1131930:CDS |
| CTTTCCTCGTCCATTCCTTC+TGG | 0.245300 | 7_3:+84697551 | None:intergenic |
| GTTGGGAATTCATTCCATTA+TGG | 0.256333 | 7_3:-84698500 | Msa1131930:CDS |
| TCAATTGATCAGACCAGTTT+TGG | 0.293862 | 7_3:-84699021 | Msa1131930:CDS |
| TTTGCACTTTGTGAGAAATA+AGG | 0.301603 | 7_3:+84698323 | None:intergenic |
| GACTGTCGAACTGGGACTTT+AGG | 0.304229 | 7_3:+84697732 | None:intergenic |
| TTTGAAGAAGATTGACGTAT+AGG | 0.315711 | 7_3:+84700062 | None:intergenic |
| ATGGAGGAAGAGGAAGTTTA+GGG | 0.329597 | 7_3:-84698285 | Msa1131930:CDS |
| GTTCCTGGCAAATCCTTCAT+TGG | 0.348050 | 7_3:-84697584 | Msa1131930:CDS |
| TACTACATCATTGACACATT+GGG | 0.351009 | 7_3:-84697377 | Msa1131930:CDS |
| ACTGTCGAACTGGGACTTTA+GGG | 0.351450 | 7_3:+84697733 | None:intergenic |
| CATGGAGGAAGAGGAAGTTT+AGG | 0.356353 | 7_3:-84698286 | Msa1131930:CDS |
| CTCGAATTAGACTGTCGAAC+TGG | 0.358791 | 7_3:+84697723 | None:intergenic |
| CGTCCGCTCTCTGTTGTTCC+TGG | 0.365341 | 7_3:-84697599 | Msa1131930:CDS |
| TTCATTCCATTATGGAACTT+TGG | 0.376536 | 7_3:-84698492 | Msa1131930:CDS |
| GCATGAAATCATGATAGTTC+TGG | 0.391849 | 7_3:+84697756 | None:intergenic |
| GTAGTGGTAGCAAGTATTCT+AGG | 0.392435 | 7_3:-84698610 | Msa1131930:CDS |
| CAGAGGCCAAAGTTCCATAA+TGG | 0.393125 | 7_3:+84698486 | None:intergenic |
| TATGTTTGTTGTTGGGAGTT+GGG | 0.393335 | 7_3:-84697918 | Msa1131930:CDS |
| TGGAATGTTCAAACCAAAAC+TGG | 0.397341 | 7_3:+84699008 | None:intergenic |
| AATTCCCATCAGAGAGTTGC+AGG | 0.397783 | 7_3:-84697084 | Msa1131930:CDS |
| AGAGTACATCAAAAGCTTCT+TGG | 0.399472 | 7_3:-84697111 | Msa1131930:CDS |
| AACTATTGCATGCCTGATGC+TGG | 0.399535 | 7_3:-84698386 | Msa1131930:CDS |
| TGATGCTGGGCGTTCGCATA+TGG | 0.400316 | 7_3:-84698372 | Msa1131930:CDS |
| GTTCACTAGTTTCACAAGAC+TGG | 0.409902 | 7_3:-84697971 | Msa1131930:intron |
| ATATGTTTGTTGTTGGGAGT+TGG | 0.412413 | 7_3:-84697919 | Msa1131930:CDS |
| TCTAGATCAAAATGCCCATC+AGG | 0.415438 | 7_3:+84697644 | None:intergenic |
| CATCATCTTTGTAATCTCAA+TGG | 0.419230 | 7_3:-84699891 | Msa1131930:CDS |
| AAGCCGCCTAAAGAAGTTAT+CGG | 0.423411 | 7_3:-84697200 | Msa1131930:CDS |
| ATGTAATTGTAGGGATTCAA+TGG | 0.426323 | 7_3:-84699108 | Msa1131930:intron |
| TTGTGATGACAAAGACATTT+GGG | 0.430469 | 7_3:-84698417 | Msa1131930:CDS |
| AACATTCCACTCACAAATCC+TGG | 0.431727 | 7_3:-84698994 | Msa1131930:CDS |
| TTGTTGCCGTAATTGCTGAT+TGG | 0.432647 | 7_3:-84697781 | Msa1131930:CDS |
| ATTGTGATGACAAAGACATT+TGG | 0.437795 | 7_3:-84698418 | Msa1131930:CDS |
| GGAGATGATATGTTTGTTGT+TGG | 0.447708 | 7_3:-84697926 | Msa1131930:CDS |
| GATACGCCAATCTCTGAATT+CGG | 0.451330 | 7_3:-84697947 | Msa1131930:CDS |
| AAGGCGGGCCGTGGAGAAGA+AGG | 0.457027 | 7_3:-84698635 | Msa1131930:CDS |
| CTGGAACCAATCAGCAATTA+CGG | 0.458400 | 7_3:+84697775 | None:intergenic |
| CTTAATGTAAAGAAACTCAT+TGG | 0.458855 | 7_3:-84700092 | Msa1131930:CDS |
| ACTTTGGCCTCTGCAAATGC+TGG | 0.460442 | 7_3:-84698476 | Msa1131930:CDS |
| AATGTCTTTCGACAACATTT+GGG | 0.464360 | 7_3:-84697507 | Msa1131930:CDS |
| GAGATGATATGTTTGTTGTT+GGG | 0.466826 | 7_3:-84697925 | Msa1131930:CDS |
| AAGCCGGCCTTAGGAAAGTA+AGG | 0.467172 | 7_3:-84698694 | Msa1131930:CDS |
| TCCTTACCGATAACTTCTTT+AGG | 0.471909 | 7_3:+84697194 | None:intergenic |
| ATATGCGAACGCCCAGCATC+AGG | 0.472606 | 7_3:+84698374 | None:intergenic |
| AGTTCTTACCTTCGAAGAGA+TGG | 0.472634 | 7_3:+84698172 | None:intergenic |
| ATCACAATTCATTCTCGTGT+TGG | 0.485727 | 7_3:+84698433 | None:intergenic |
| GCCATGGTTGCTTCCACCGC+AGG | 0.486435 | 7_3:+84696960 | None:intergenic |
| TTCACTGCGTTGATCAATTG+AGG | 0.487309 | 7_3:+84697835 | None:intergenic |
| GAAATTACAATGACAGAGAA+AGG | 0.488541 | 7_3:-84698734 | Msa1131930:CDS |
| TTCACTAGTTTCACAAGACT+GGG | 0.489487 | 7_3:-84697970 | Msa1131930:intron |
| TAGTGTGTCTGCTGCAGCCA+TGG | 0.489598 | 7_3:+84696944 | None:intergenic |
| GAATACGACCACGTTTCTGC+TGG | 0.496760 | 7_3:-84699942 | Msa1131930:CDS |
| CAACGCAGTGAACGCGCGGC+GGG | 0.497040 | 7_3:-84697824 | Msa1131930:CDS |
| ATCAGCCTGCAACTCTCTGA+TGG | 0.499347 | 7_3:+84697079 | None:intergenic |
| AAATCAGAAAAGGCGGGCCG+TGG | 0.509759 | 7_3:-84698644 | Msa1131930:CDS |
| AATGCAGATATCAATTAGCT+TGG | 0.510003 | 7_3:-84698819 | Msa1131930:intron |
| TCATCTCCGAATTCAGAGAT+TGG | 0.510194 | 7_3:+84697941 | None:intergenic |
| GCATACTTCCATGGAGGAAG+AGG | 0.512733 | 7_3:-84698295 | Msa1131930:CDS |
| AAACCTTACTTTCCTAAGGC+CGG | 0.513408 | 7_3:+84698691 | None:intergenic |
| TTGGTGACGAGTGGCGGCCA+TGG | 0.513831 | 7_3:+84700131 | None:intergenic |
| CAATGTCTTGTTTCATCCGT+GGG | 0.515075 | 7_3:-84699856 | Msa1131930:CDS |
| TGTAGAAATCGGTTCCCTGA+TGG | 0.515160 | 7_3:-84697659 | Msa1131930:CDS |
| TTTCACAAGAGAGGCTGTCA+TGG | 0.515952 | 7_3:-84699964 | Msa1131930:CDS |
| ATCAGGGAACCGATTTCTAC+AGG | 0.520123 | 7_3:+84697661 | None:intergenic |
| GGGAATGAGGATTCAAGTGT+TGG | 0.520748 | 7_3:-84698518 | Msa1131930:CDS |
| ACAATGAGACCTGTAGAAAT+CGG | 0.521853 | 7_3:-84697670 | Msa1131930:CDS |
| GTAGAAATCGGTTCCCTGAT+GGG | 0.523344 | 7_3:-84697658 | Msa1131930:CDS |
| TTTCTTTCATCCAGAAGGAA+TGG | 0.524452 | 7_3:-84697561 | Msa1131930:CDS |
| CTAAACTTCCTCTTCCTCCA+TGG | 0.527587 | 7_3:+84698287 | None:intergenic |
| TTCGAGAAGGCTCCTCAGAA+TGG | 0.527606 | 7_3:-84697706 | Msa1131930:CDS |
| ATTGGTTTCTTTCATCCAGA+AGG | 0.527618 | 7_3:-84697566 | Msa1131930:CDS |
| TTACTACATCATTGACACAT+TGG | 0.528944 | 7_3:-84697378 | Msa1131930:CDS |
| GCAGATATCAATTAGCTTGG+TGG | 0.531349 | 7_3:-84698816 | Msa1131930:intron |
| GAAGAGGAGGTTGTCTGCAG+AGG | 0.532288 | 7_3:-84697149 | Msa1131930:CDS |
| CGATTTAGAAGATTCAGACC+GGG | 0.534030 | 7_3:-84698540 | Msa1131930:CDS |
| TCTTGTGAAATTTCTTGCGA+CGG | 0.536971 | 7_3:+84699977 | None:intergenic |
| TACAGGTCTCATTGTCGCGT+AGG | 0.541505 | 7_3:+84697678 | None:intergenic |
| GGAATGAGGATTCAAGTGTT+GGG | 0.544126 | 7_3:-84698517 | Msa1131930:CDS |
| TGCGACGGAGCCTCGTCGCA+AGG | 0.545916 | 7_3:+84699992 | None:intergenic |
| GTCCCCACCGTCTTCAGCAT+AGG | 0.550462 | 7_3:+84698241 | None:intergenic |
| ATCTTCTAGGAAATCAGAAA+AGG | 0.550812 | 7_3:-84698654 | Msa1131930:CDS |
| CGTTCCTGTGTCATCACCAT+CGG | 0.552222 | 7_3:-84698768 | Msa1131930:CDS |
| CACTACTTCCTTCTTCTCCA+CGG | 0.552441 | 7_3:+84698627 | None:intergenic |
| AGATGATGAGGTGGCGTCCA+TGG | 0.552992 | 7_3:-84700148 | Msa1131930:CDS |
| ATTTCTTCTGATTGAGCCGA+TGG | 0.553305 | 7_3:+84698752 | None:intergenic |
| AAGAGGAGGTTGTCTGCAGA+GGG | 0.554332 | 7_3:-84697148 | Msa1131930:CDS |
| CGCAAGAAATTTCACAAGAG+AGG | 0.555370 | 7_3:-84699973 | Msa1131930:CDS |
| GATCTTTCTGCAATAAAAGC+CGG | 0.555462 | 7_3:-84698710 | Msa1131930:CDS |
| CACTTGAATCCTCATTCCCC+CGG | 0.560381 | 7_3:+84698522 | None:intergenic |
| GATTGCTGTGCAGAATCTCC+AGG | 0.563505 | 7_3:+84698976 | None:intergenic |
| TCAATTTGTAGTCTTTGATG+AGG | 0.565505 | 7_3:+84697029 | None:intergenic |
| GGTAGCAAGTATTCTAGGAG+TGG | 0.569478 | 7_3:-84698605 | Msa1131930:CDS |
| GCCTAAAGAAGTTATCGGTA+AGG | 0.570571 | 7_3:-84697195 | Msa1131930:CDS |
| ACGATTTAGAAGATTCAGAC+CGG | 0.570676 | 7_3:-84698541 | Msa1131930:CDS |
| ACTATTGCATGCCTGATGCT+GGG | 0.573068 | 7_3:-84698385 | Msa1131930:CDS |
| ACAATGTCTTGTTTCATCCG+TGG | 0.573090 | 7_3:-84699857 | Msa1131930:CDS |
| TCGAATTAGACTGTCGAACT+GGG | 0.575257 | 7_3:+84697724 | None:intergenic |
| TGGATGAAAGAAACCAATGA+AGG | 0.576485 | 7_3:+84697571 | None:intergenic |
| AAACCAATGAAGGATTTGCC+AGG | 0.576669 | 7_3:+84697581 | None:intergenic |
| AAGGAAGAAAGTGTTGACTT+AGG | 0.578642 | 7_3:+84700011 | None:intergenic |
| TGATGAATCCATCTCTTCGA+AGG | 0.579333 | 7_3:-84698180 | Msa1131930:intron |
| TTCTATTGAAGAGCAAGAAG+AGG | 0.579561 | 7_3:-84697165 | Msa1131930:CDS |
| TCCTGCGGTGGAAGCAACCA+TGG | 0.581159 | 7_3:-84696961 | Msa1131930:CDS |
| CAAAGCGCAGCATACTTCCA+TGG | 0.581184 | 7_3:-84698304 | Msa1131930:CDS |
| AAAGAAGTTATCGGTAAGGA+AGG | 0.581404 | 7_3:-84697191 | Msa1131930:CDS |
| AAAGAGATCACTAGCCGCGA+TGG | 0.581709 | 7_3:-84697890 | Msa1131930:CDS |
| GAAAACATGAGGTCCACCAT+TGG | 0.581782 | 7_3:+84697451 | None:intergenic |
| GGAGGTTGTCTGCAGAGGGA+AGG | 0.583123 | 7_3:-84697144 | Msa1131930:CDS |
| TTCTAGGAAATCAGAAAAGG+CGG | 0.583702 | 7_3:-84698651 | Msa1131930:CDS |
| AGGCCTATGCTGAAGACGGT+GGG | 0.586237 | 7_3:-84698244 | Msa1131930:CDS |
| GAAAGATTTGAGTTTCTTCG+CGG | 0.588708 | 7_3:-84697533 | Msa1131930:CDS |
| AATGGACTTACACAGAGTAA+AGG | 0.590140 | 7_3:+84698952 | None:intergenic |
| TATTGAAGAGCAAGAAGAGG+AGG | 0.590253 | 7_3:-84697162 | Msa1131930:CDS |
| GCGCTTCAGATTAAATGGAA+AGG | 0.591516 | 7_3:-84700035 | Msa1131930:CDS |
| TTACCGATAACTTCTTTAGG+CGG | 0.596458 | 7_3:+84697197 | None:intergenic |
| TCAGCCTGCAACTCTCTGAT+GGG | 0.597277 | 7_3:+84697080 | None:intergenic |
| TCTAGGAAATCAGAAAAGGC+GGG | 0.597356 | 7_3:-84698650 | Msa1131930:CDS |
| ACTACATCATTGACACATTG+GGG | 0.597911 | 7_3:-84697376 | Msa1131930:CDS |
| CGTGGAGAAGAAGGAAGTAG+TGG | 0.598459 | 7_3:-84698626 | Msa1131930:CDS |
| GCGTAGGTTTCTCCATTCTG+AGG | 0.601252 | 7_3:+84697694 | None:intergenic |
| AGATTGAAAGCGATTTCCCA+CGG | 0.606573 | 7_3:+84699840 | None:intergenic |
| TGATCAACGCAGTGAACGCG+CGG | 0.615289 | 7_3:-84697828 | Msa1131930:CDS |
| CATCAGGCATGCAATAGTTG+TGG | 0.616829 | 7_3:+84698390 | None:intergenic |
| GGAGTTGTTGTTGATAAACA+AGG | 0.618758 | 7_3:+84696981 | None:intergenic |
| CTGTCGAACTGGGACTTTAG+GGG | 0.621458 | 7_3:+84697734 | None:intergenic |
| GAACATGAGTGTCTCACCAA+TGG | 0.622666 | 7_3:-84697467 | Msa1131930:CDS |
| TTGGCCTCTGCAAATGCTGG+AGG | 0.623212 | 7_3:-84698473 | Msa1131930:CDS |
| ACACTTTCTTCCTTGCGACG+AGG | 0.625009 | 7_3:-84700002 | Msa1131930:CDS |
| CAACTCTCTGATGGGAATTG+CGG | 0.626152 | 7_3:+84697088 | None:intergenic |
| ATCAACAACAACTCCTGCGG+TGG | 0.626386 | 7_3:-84696973 | Msa1131930:CDS |
| TAATGGTGGTGAAGATGATG+AGG | 0.627803 | 7_3:-84700160 | Msa1131930:CDS |
| CGACGAAACCAGCAGAAACG+TGG | 0.635377 | 7_3:+84699934 | None:intergenic |
| CATGAGTGTCTCACCAATGG+TGG | 0.635662 | 7_3:-84697464 | Msa1131930:CDS |
| GGCCTATGCTGAAGACGGTG+GGG | 0.638192 | 7_3:-84698243 | Msa1131930:CDS |
| AACATTTGGGACGAGATCAG+TGG | 0.639738 | 7_3:-84697494 | Msa1131930:CDS |
| AAGGCCTATGCTGAAGACGG+TGG | 0.640513 | 7_3:-84698245 | Msa1131930:CDS |
| CAGATTCAGAGCTAAGCTGT+CGG | 0.643095 | 7_3:+84698201 | None:intergenic |
| GATTTAGAAGATTCAGACCG+GGG | 0.648372 | 7_3:-84698539 | Msa1131930:CDS |
| TTCGACAGTCTAATTCGAGA+AGG | 0.648846 | 7_3:-84697719 | Msa1131930:CDS |
| CTAGATCAAAATGCCCATCA+GGG | 0.650970 | 7_3:+84697645 | None:intergenic |
| GAATCTCCAGGATTTGTGAG+TGG | 0.651109 | 7_3:+84698988 | None:intergenic |
| CAACTAACAATGAAAACATG+AGG | 0.651723 | 7_3:+84697440 | None:intergenic |
| TTTATCAACAACAACTCCTG+CGG | 0.662831 | 7_3:-84696976 | Msa1131930:CDS |
| ATAAGGCTCAGAAGAAGACG+TGG | 0.663268 | 7_3:+84698340 | None:intergenic |
| AGGGATTCAATGGAAGCCCA+AGG | 0.664531 | 7_3:-84699098 | Msa1131930:CDS |
| TCATCCAGAAGGAATGGACG+AGG | 0.665308 | 7_3:-84697555 | Msa1131930:CDS |
| TGGTGGTGAAGATGATGAGG+TGG | 0.670788 | 7_3:-84700157 | Msa1131930:CDS |
| TGGAGGAAGAGGAAGTTTAG+GGG | 0.671003 | 7_3:-84698284 | Msa1131930:CDS |
| TTGCCAGGAACAACAGAGAG+CGG | 0.680350 | 7_3:+84697596 | None:intergenic |
| TCAACGCAGTGAACGCGCGG+CGG | 0.681053 | 7_3:-84697825 | Msa1131930:CDS |
| TGATCCTCCAGCATTTGCAG+AGG | 0.682683 | 7_3:+84698469 | None:intergenic |
| TGAGCCGATGGTGATGACAC+AGG | 0.701956 | 7_3:+84698764 | None:intergenic |
| TCACTAGTTTCACAAGACTG+GGG | 0.702314 | 7_3:-84697969 | Msa1131930:intron |
| ATTTAGAAGATTCAGACCGG+GGG | 0.706186 | 7_3:-84698538 | Msa1131930:CDS |
| CTACATCATTGACACATTGG+GGG | 0.708648 | 7_3:-84697375 | Msa1131930:CDS |
| CAAGCTTCATGTGACCATCG+CGG | 0.715114 | 7_3:+84697876 | None:intergenic |
| AGCGCAGCATACTTCCATGG+AGG | 0.725294 | 7_3:-84698301 | Msa1131930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTCATTTTTTTTTTAAT+TGG | - | chr7_3:84697339-84697358 | Msa1131930:CDS | 10.0% |
| !!! | GATTCATTTTTTTTTTAATT+GGG | - | chr7_3:84697340-84697359 | Msa1131930:CDS | 10.0% |
| !!! | GGATTTTTTAAATAAAATAT+TGG | - | chr7_3:84697723-84697742 | Msa1131930:CDS | 10.0% |
| !!! | AATCTTTTTTTGTTGATTTT+AGG | - | chr7_3:84697380-84697399 | Msa1131930:CDS | 15.0% |
| !!! | ATCTTTTTTTGTTGATTTTA+GGG | - | chr7_3:84697381-84697400 | Msa1131930:CDS | 15.0% |
| !!! | TTATATTGTTTTTCTTTTGT+TGG | - | chr7_3:84697443-84697462 | Msa1131930:CDS | 15.0% |
| !!! | TATATTGTTTTTCTTTTGTT+GGG | - | chr7_3:84697444-84697463 | Msa1131930:CDS | 15.0% |
| !!! | TTTTTATGTTTCCTAATATT+TGG | - | chr7_3:84697541-84697560 | Msa1131930:CDS | 15.0% |
| !!! | TTGTTTTTTAATGTAATTGT+AGG | - | chr7_3:84697954-84697973 | Msa1131930:CDS | 15.0% |
| !!! | TGTTTTTTAATGTAATTGTA+GGG | - | chr7_3:84697955-84697974 | Msa1131930:CDS | 15.0% |
| !! | ATAATAAACTATCAACATTA+TGG | - | chr7_3:84698178-84698197 | Msa1131930:intron | 15.0% |
| !! | AAAGAAAAAGAAAGAAAAGA+TGG | + | chr7_3:84697291-84697310 | None:intergenic | 20.0% |
| !! | ACAAAAACAGATCAAATAAA+AGG | + | chr7_3:84697522-84697541 | None:intergenic | 20.0% |
| !! | AAACAATCACAAATTATGTT+TGG | + | chr7_3:84697940-84697959 | None:intergenic | 20.0% |
| !!! | TTTTTATCATTTGATGATTG+AGG | + | chr7_3:84699803-84699822 | None:intergenic | 20.0% |
| ! | CTTAATGTAAAGAAACTCAT+TGG | - | chr7_3:84696980-84696999 | Msa1131930:CDS | 25.0% |
| ! | AAACAGATCAAATAAAAGGA+CGG | + | chr7_3:84697518-84697537 | None:intergenic | 25.0% |
| ! | AATTAATGACCTTAACTTCA+TGG | + | chr7_3:84697611-84697630 | None:intergenic | 25.0% |
| ! | TTTGACAAAAAAAACGAAGT+AGG | - | chr7_3:84697702-84697721 | Msa1131930:CDS | 25.0% |
| !!! | TTATTTAATCGGTTAGTTTG+AGG | - | chr7_3:84697848-84697867 | Msa1131930:CDS | 25.0% |
| ! | ATGACAATAAATTACAAGAG+AGG | + | chr7_3:84698154-84698173 | None:intergenic | 25.0% |
| !! | CAACTTTGAGAATGAAAAAA+TGG | + | chr7_3:84699664-84699683 | None:intergenic | 25.0% |
| ! | TCAAATGATAAAAAAGCAAC+TGG | - | chr7_3:84699809-84699828 | Msa1131930:intron | 25.0% |
| TTTGAAGAAGATTGACGTAT+AGG | + | chr7_3:84697013-84697032 | None:intergenic | 30.0% | |
| AATTAGCGCTTCAGATTAAA+TGG | - | chr7_3:84697032-84697051 | Msa1131930:CDS | 30.0% | |
| CATCATCTTTGTAATCTCAA+TGG | - | chr7_3:84697181-84697200 | Msa1131930:CDS | 30.0% | |
| ! | TTTTCTTTTGTTGGGTTTGT+AGG | - | chr7_3:84697452-84697471 | Msa1131930:CDS | 30.0% |
| TTGTAGGATGGATGAAAATT+TGG | - | chr7_3:84697468-84697487 | Msa1131930:CDS | 30.0% | |
| TGAAAATTTGGATGATTCTG+TGG | - | chr7_3:84697480-84697499 | Msa1131930:CDS | 30.0% | |
| GAAAATTTGGATGATTCTGT+GGG | - | chr7_3:84697481-84697500 | Msa1131930:CDS | 30.0% | |
| AATTTCCAGGACCAAATATT+AGG | + | chr7_3:84697555-84697574 | None:intergenic | 30.0% | |
| GTTAAGGTCATTAATTGAAG+AGG | - | chr7_3:84697615-84697634 | Msa1131930:CDS | 30.0% | |
| ATGTAATTGTAGGGATTCAA+TGG | - | chr7_3:84697964-84697983 | Msa1131930:CDS | 30.0% | |
| AATGCAGATATCAATTAGCT+TGG | - | chr7_3:84698253-84698272 | Msa1131930:CDS | 30.0% | |
| GAAATTACAATGACAGAGAA+AGG | - | chr7_3:84698338-84698357 | Msa1131930:CDS | 30.0% | |
| TGAAAAACCTTACTTTCCTA+AGG | + | chr7_3:84698388-84698407 | None:intergenic | 30.0% | |
| TCACAGAATTTGTATCTTCT+AGG | - | chr7_3:84698405-84698424 | Msa1131930:CDS | 30.0% | |
| ! | ATCTTCTAGGAAATCAGAAA+AGG | - | chr7_3:84698418-84698437 | Msa1131930:CDS | 30.0% |
| TTCATTCCATTATGGAACTT+TGG | - | chr7_3:84698580-84698599 | Msa1131930:CDS | 30.0% | |
| ATTGTGATGACAAAGACATT+TGG | - | chr7_3:84698654-84698673 | Msa1131930:CDS | 30.0% | |
| TTGTGATGACAAAGACATTT+GGG | - | chr7_3:84698655-84698674 | Msa1131930:CDS | 30.0% | |
| TTTGCACTTTGTGAGAAATA+AGG | + | chr7_3:84698752-84698771 | None:intergenic | 30.0% | |
| !! | GAGATGATATGTTTGTTGTT+GGG | - | chr7_3:84699147-84699166 | Msa1131930:intron | 30.0% |
| AATGTCTTTCGACAACATTT+GGG | - | chr7_3:84699565-84699584 | Msa1131930:intron | 30.0% | |
| CAACTAACAATGAAAACATG+AGG | + | chr7_3:84699635-84699654 | None:intergenic | 30.0% | |
| ! | CTCATGTTTTCATTGTTAGT+TGG | - | chr7_3:84699633-84699652 | Msa1131930:intron | 30.0% |
| TTACTACATCATTGACACAT+TGG | - | chr7_3:84699694-84699713 | Msa1131930:intron | 30.0% | |
| TACTACATCATTGACACATT+GGG | - | chr7_3:84699695-84699714 | Msa1131930:intron | 30.0% | |
| AATGATAAAAAAGCAACTGG+TGG | - | chr7_3:84699812-84699831 | Msa1131930:intron | 30.0% | |
| TCAATTTGTAGTCTTTGATG+AGG | + | chr7_3:84700046-84700065 | None:intergenic | 30.0% | |
| !! | AAGGAAGAAAGTGTTGACTT+AGG | + | chr7_3:84697064-84697083 | None:intergenic | 35.0% |
| TCTTGTGAAATTTCTTGCGA+CGG | + | chr7_3:84697098-84697117 | None:intergenic | 35.0% | |
| TGTTTCCTAATATTTGGTCC+TGG | - | chr7_3:84697547-84697566 | Msa1131930:CDS | 35.0% | |
| ! | GGTTGAAGAGAAAGTTGATT+AGG | + | chr7_3:84697590-84697609 | None:intergenic | 35.0% |
| TCTCTTCAACCATGAAGTTA+AGG | - | chr7_3:84697599-84697618 | Msa1131930:CDS | 35.0% | |
| AAGGTCATTAATTGAAGAGG+TGG | - | chr7_3:84697618-84697637 | Msa1131930:CDS | 35.0% | |
| TTAATTGAAGAGGTGGAGAT+TGG | - | chr7_3:84697625-84697644 | Msa1131930:CDS | 35.0% | |
| !! | CTTTCCCTTTCAGTTTTATG+CGG | - | chr7_3:84697748-84697767 | Msa1131930:CDS | 35.0% |
| ACTACCGCATAAAACTGAAA+GGG | + | chr7_3:84697755-84697774 | None:intergenic | 35.0% | |
| TACTACCGCATAAAACTGAA+AGG | + | chr7_3:84697756-84697775 | None:intergenic | 35.0% | |
| ! | TCAATTGATCAGACCAGTTT+TGG | - | chr7_3:84698051-84698070 | Msa1131930:intron | 35.0% |
| TGGAATGTTCAAACCAAAAC+TGG | + | chr7_3:84698067-84698086 | None:intergenic | 35.0% | |
| ! | AATGGACTTACACAGAGTAA+AGG | + | chr7_3:84698123-84698142 | None:intergenic | 35.0% |
| ACAAGAGAGGATTAACTGAA+TGG | + | chr7_3:84698141-84698160 | None:intergenic | 35.0% | |
| GATCTTTCTGCAATAAAAGC+CGG | - | chr7_3:84698362-84698381 | Msa1131930:CDS | 35.0% | |
| ! | TTCTAGGAAATCAGAAAAGG+CGG | - | chr7_3:84698421-84698440 | Msa1131930:CDS | 35.0% |
| ACGATTTAGAAGATTCAGAC+CGG | - | chr7_3:84698531-84698550 | Msa1131930:CDS | 35.0% | |
| GTTGGGAATTCATTCCATTA+TGG | - | chr7_3:84698572-84698591 | Msa1131930:CDS | 35.0% | |
| ATCACAATTCATTCTCGTGT+TGG | + | chr7_3:84698642-84698661 | None:intergenic | 35.0% | |
| !!! | GCATAGGCCTTTTTTAACAA+TGG | + | chr7_3:84698818-84698837 | None:intergenic | 35.0% |
| ! | TTCACTAGTTTCACAAGACT+GGG | - | chr7_3:84699102-84699121 | Msa1131930:intron | 35.0% |
| !! | GGAGATGATATGTTTGTTGT+TGG | - | chr7_3:84699146-84699165 | Msa1131930:intron | 35.0% |
| !! | ATATGTTTGTTGTTGGGAGT+TGG | - | chr7_3:84699153-84699172 | Msa1131930:intron | 35.0% |
| !! | TATGTTTGTTGTTGGGAGTT+GGG | - | chr7_3:84699154-84699173 | Msa1131930:intron | 35.0% |
| GCATGAAATCATGATAGTTC+TGG | + | chr7_3:84699319-84699338 | None:intergenic | 35.0% | |
| ACAATGAGACCTGTAGAAAT+CGG | - | chr7_3:84699402-84699421 | Msa1131930:intron | 35.0% | |
| TGGATGAAAGAAACCAATGA+AGG | + | chr7_3:84699504-84699523 | None:intergenic | 35.0% | |
| ! | ATTGGTTTCTTTCATCCAGA+AGG | - | chr7_3:84699506-84699525 | Msa1131930:intron | 35.0% |
| TTTCTTTCATCCAGAAGGAA+TGG | - | chr7_3:84699511-84699530 | Msa1131930:intron | 35.0% | |
| ! | GAAAGATTTGAGTTTCTTCG+CGG | - | chr7_3:84699539-84699558 | Msa1131930:intron | 35.0% |
| CAATGTCTTTCGACAACATT+TGG | - | chr7_3:84699564-84699583 | Msa1131930:intron | 35.0% | |
| ACTACATCATTGACACATTG+GGG | - | chr7_3:84699696-84699715 | Msa1131930:intron | 35.0% | |
| !! | CTGTGTTGCTGTCAAATTTT+AGG | + | chr7_3:84699757-84699776 | None:intergenic | 35.0% |
| TTACCGATAACTTCTTTAGG+CGG | + | chr7_3:84699878-84699897 | None:intergenic | 35.0% | |
| TCCTTACCGATAACTTCTTT+AGG | + | chr7_3:84699881-84699900 | None:intergenic | 35.0% | |
| AAAGAAGTTATCGGTAAGGA+AGG | - | chr7_3:84699881-84699900 | Msa1131930:CDS | 35.0% | |
| TTCTATTGAAGAGCAAGAAG+AGG | - | chr7_3:84699907-84699926 | Msa1131930:CDS | 35.0% | |
| AGAGTACATCAAAAGCTTCT+TGG | - | chr7_3:84699961-84699980 | Msa1131930:CDS | 35.0% | |
| ! | GGAGTTGTTGTTGATAAACA+AGG | + | chr7_3:84700094-84700113 | None:intergenic | 35.0% |
| TTTATCAACAACAACTCCTG+CGG | - | chr7_3:84700096-84700115 | Msa1131930:CDS | 35.0% | |
| !!! | TGATACTTTTTGGTGACGAG+TGG | + | chr7_3:84696953-84696972 | None:intergenic | 40.0% |
| !! | TCACCAAAAAGTATCACGTC+AGG | - | chr7_3:84696957-84696976 | Msa1131930:CDS | 40.0% |
| ! | AAGCCTGACGTGATACTTTT+TGG | + | chr7_3:84696963-84696982 | None:intergenic | 40.0% |
| GCGCTTCAGATTAAATGGAA+AGG | - | chr7_3:84697037-84697056 | Msa1131930:CDS | 40.0% | |
| CGCAAGAAATTTCACAAGAG+AGG | - | chr7_3:84697099-84697118 | Msa1131930:CDS | 40.0% | |
| !! | ACAATGTCTTGTTTCATCCG+TGG | - | chr7_3:84697215-84697234 | Msa1131930:CDS | 40.0% |
| !! | CAATGTCTTGTTTCATCCGT+GGG | - | chr7_3:84697216-84697235 | Msa1131930:CDS | 40.0% |
| AGATTGAAAGCGATTTCCCA+CGG | + | chr7_3:84697235-84697254 | None:intergenic | 40.0% | |
| ! | CTTTTGTTGGGTTTGTAGGA+TGG | - | chr7_3:84697456-84697475 | Msa1131930:CDS | 40.0% |
| ATTTGGATGATTCTGTGGGT+TGG | - | chr7_3:84697485-84697504 | Msa1131930:CDS | 40.0% | |
| TTTGGATGATTCTGTGGGTT+GGG | - | chr7_3:84697486-84697505 | Msa1131930:CDS | 40.0% | |
| GTGTGACACAACAAATTTCC+AGG | + | chr7_3:84697568-84697587 | None:intergenic | 40.0% | |
| ! | TGCGGTAGTAGTTGACTTAT+TGG | - | chr7_3:84697766-84697785 | Msa1131930:CDS | 40.0% |
| AATGGAAGCCCAAGGAAAAA+GGG | - | chr7_3:84697982-84698001 | Msa1131930:intron | 40.0% | |
| ! | CAACAGTACCCTTTTTCCTT+GGG | + | chr7_3:84697993-84698012 | None:intergenic | 40.0% |
| ! | ACAACAGTACCCTTTTTCCT+TGG | + | chr7_3:84697994-84698013 | None:intergenic | 40.0% |
| !! | AGGAAAAAGGGTACTGTTGT+TGG | - | chr7_3:84697994-84698013 | Msa1131930:intron | 40.0% |
| AACATTCCACTCACAAATCC+TGG | - | chr7_3:84698078-84698097 | Msa1131930:intron | 40.0% | |
| ! | GCAGATATCAATTAGCTTGG+TGG | - | chr7_3:84698256-84698275 | Msa1131930:CDS | 40.0% |
| ATTTCTTCTGATTGAGCCGA+TGG | + | chr7_3:84698323-84698342 | None:intergenic | 40.0% | |
| AAACCTTACTTTCCTAAGGC+CGG | + | chr7_3:84698384-84698403 | None:intergenic | 40.0% | |
| TCTAGGAAATCAGAAAAGGC+GGG | - | chr7_3:84698422-84698441 | Msa1131930:CDS | 40.0% | |
| GTAGTGGTAGCAAGTATTCT+AGG | - | chr7_3:84698462-84698481 | Msa1131930:CDS | 40.0% | |
| CGATTTAGAAGATTCAGACC+GGG | - | chr7_3:84698532-84698551 | Msa1131930:CDS | 40.0% | |
| GATTTAGAAGATTCAGACCG+GGG | - | chr7_3:84698533-84698552 | Msa1131930:CDS | 40.0% | |
| ATTTAGAAGATTCAGACCGG+GGG | - | chr7_3:84698534-84698553 | Msa1131930:CDS | 40.0% | |
| GGAATGAGGATTCAAGTGTT+GGG | - | chr7_3:84698555-84698574 | Msa1131930:CDS | 40.0% | |
| ATGGAGGAAGAGGAAGTTTA+GGG | - | chr7_3:84698787-84698806 | Msa1131930:CDS | 40.0% | |
| GGGAGAGCCATTGTTAAAAA+AGG | - | chr7_3:84698808-84698827 | Msa1131930:CDS | 40.0% | |
| AAAAAGGCCTATGCTGAAGA+CGG | - | chr7_3:84698824-84698843 | Msa1131930:intron | 40.0% | |
| TGATGAATCCATCTCTTCGA+AGG | - | chr7_3:84698892-84698911 | Msa1131930:intron | 40.0% | |
| AGTTCTTACCTTCGAAGAGA+TGG | + | chr7_3:84698903-84698922 | None:intergenic | 40.0% | |
| ! | GTTCACTAGTTTCACAAGAC+TGG | - | chr7_3:84699101-84699120 | Msa1131930:intron | 40.0% |
| ! | TCACTAGTTTCACAAGACTG+GGG | - | chr7_3:84699103-84699122 | Msa1131930:intron | 40.0% |
| GATACGCCAATCTCTGAATT+CGG | - | chr7_3:84699125-84699144 | Msa1131930:intron | 40.0% | |
| TCATCTCCGAATTCAGAGAT+TGG | + | chr7_3:84699134-84699153 | None:intergenic | 40.0% | |
| ! | TTCACTGCGTTGATCAATTG+AGG | + | chr7_3:84699240-84699259 | None:intergenic | 40.0% |
| TTGTTGCCGTAATTGCTGAT+TGG | - | chr7_3:84699291-84699310 | Msa1131930:intron | 40.0% | |
| CTGGAACCAATCAGCAATTA+CGG | + | chr7_3:84699300-84699319 | None:intergenic | 40.0% | |
| TCGAATTAGACTGTCGAACT+GGG | + | chr7_3:84699351-84699370 | None:intergenic | 40.0% | |
| TTCGACAGTCTAATTCGAGA+AGG | - | chr7_3:84699353-84699372 | Msa1131930:intron | 40.0% | |
| CTAGATCAAAATGCCCATCA+GGG | + | chr7_3:84699430-84699449 | None:intergenic | 40.0% | |
| TCTAGATCAAAATGCCCATC+AGG | + | chr7_3:84699431-84699450 | None:intergenic | 40.0% | |
| AAACCAATGAAGGATTTGCC+AGG | + | chr7_3:84699494-84699513 | None:intergenic | 40.0% | |
| CTACATCATTGACACATTGG+GGG | - | chr7_3:84699697-84699716 | Msa1131930:intron | 40.0% | |
| ATAAAAAAGCAACTGGTGGC+TGG | - | chr7_3:84699816-84699835 | Msa1131930:intron | 40.0% | |
| AAGCCGCCTAAAGAAGTTAT+CGG | - | chr7_3:84699872-84699891 | Msa1131930:CDS | 40.0% | |
| GCCTAAAGAAGTTATCGGTA+AGG | - | chr7_3:84699877-84699896 | Msa1131930:CDS | 40.0% | |
| TATTGAAGAGCAAGAAGAGG+AGG | - | chr7_3:84699910-84699929 | Msa1131930:CDS | 40.0% | |
| !!! | TACTTTTTGGTGACGAGTGG+CGG | + | chr7_3:84696950-84696969 | None:intergenic | 45.0% |
| TTTCACAAGAGAGGCTGTCA+TGG | - | chr7_3:84697108-84697127 | Msa1131930:CDS | 45.0% | |
| CAATGGAAGCCCAAGGAAAA+AGG | - | chr7_3:84697981-84698000 | Msa1131930:intron | 45.0% | |
| GAATCTCCAGGATTTGTGAG+TGG | + | chr7_3:84698087-84698106 | None:intergenic | 45.0% | |
| CACTACTTCCTTCTTCTCCA+CGG | + | chr7_3:84698448-84698467 | None:intergenic | 45.0% | |
| ! | GGTAGCAAGTATTCTAGGAG+TGG | - | chr7_3:84698467-84698486 | Msa1131930:CDS | 45.0% |
| GGGAATGAGGATTCAAGTGT+TGG | - | chr7_3:84698554-84698573 | Msa1131930:CDS | 45.0% | |
| CAGAGGCCAAAGTTCCATAA+TGG | + | chr7_3:84698589-84698608 | None:intergenic | 45.0% | |
| CATCAGGCATGCAATAGTTG+TGG | + | chr7_3:84698685-84698704 | None:intergenic | 45.0% | |
| AACTATTGCATGCCTGATGC+TGG | - | chr7_3:84698686-84698705 | Msa1131930:CDS | 45.0% | |
| ACTATTGCATGCCTGATGCT+GGG | - | chr7_3:84698687-84698706 | Msa1131930:CDS | 45.0% | |
| ATAAGGCTCAGAAGAAGACG+TGG | + | chr7_3:84698735-84698754 | None:intergenic | 45.0% | |
| CTAAACTTCCTCTTCCTCCA+TGG | + | chr7_3:84698788-84698807 | None:intergenic | 45.0% | |
| CATGGAGGAAGAGGAAGTTT+AGG | - | chr7_3:84698786-84698805 | Msa1131930:CDS | 45.0% | |
| TGGAGGAAGAGGAAGTTTAG+GGG | - | chr7_3:84698788-84698807 | Msa1131930:CDS | 45.0% | |
| CAGATTCAGAGCTAAGCTGT+CGG | + | chr7_3:84698874-84698893 | None:intergenic | 45.0% | |
| ACTGTCGAACTGGGACTTTA+GGG | + | chr7_3:84699342-84699361 | None:intergenic | 45.0% | |
| CTCGAATTAGACTGTCGAAC+TGG | + | chr7_3:84699352-84699371 | None:intergenic | 45.0% | |
| ! | ATCAGGGAACCGATTTCTAC+AGG | + | chr7_3:84699414-84699433 | None:intergenic | 45.0% |
| ! | TGTAGAAATCGGTTCCCTGA+TGG | - | chr7_3:84699413-84699432 | Msa1131930:intron | 45.0% |
| ! | GTAGAAATCGGTTCCCTGAT+GGG | - | chr7_3:84699414-84699433 | Msa1131930:intron | 45.0% |
| !! | GCGGACGTATTTTTGCTTCA+AGG | + | chr7_3:84699460-84699479 | None:intergenic | 45.0% |
| GTTCCTGGCAAATCCTTCAT+TGG | - | chr7_3:84699488-84699507 | Msa1131930:intron | 45.0% | |
| ! | AACATTTGGGACGAGATCAG+TGG | - | chr7_3:84699578-84699597 | Msa1131930:intron | 45.0% |
| GAACATGAGTGTCTCACCAA+TGG | - | chr7_3:84699605-84699624 | Msa1131930:intron | 45.0% | |
| GAAAACATGAGGTCCACCAT+TGG | + | chr7_3:84699624-84699643 | None:intergenic | 45.0% | |
| CAACTCTCTGATGGGAATTG+CGG | + | chr7_3:84699987-84700006 | None:intergenic | 45.0% | |
| AATTCCCATCAGAGAGTTGC+AGG | - | chr7_3:84699988-84700007 | Msa1131930:CDS | 45.0% | |
| !!! | TTTATTTATTGTTATTTAAT+CGG | - | chr7_3:84697837-84697856 | Msa1131930:CDS | 5.0% |
| ! | TGGTGGTGAAGATGATGAGG+TGG | - | chr7_3:84696915-84696934 | Msa1131930:CDS | 50.0% |
| ACACTTTCTTCCTTGCGACG+AGG | - | chr7_3:84697070-84697089 | Msa1131930:CDS | 50.0% | |
| GAATACGACCACGTTTCTGC+TGG | - | chr7_3:84697130-84697149 | Msa1131930:CDS | 50.0% | |
| AGGGATTCAATGGAAGCCCA+AGG | - | chr7_3:84697974-84697993 | Msa1131930:intron | 50.0% | |
| GATTGCTGTGCAGAATCTCC+AGG | + | chr7_3:84698099-84698118 | None:intergenic | 50.0% | |
| CGTTCCTGTGTCATCACCAT+CGG | - | chr7_3:84698304-84698323 | Msa1131930:CDS | 50.0% | |
| CTGCAATAAAAGCCGGCCTT+AGG | - | chr7_3:84698369-84698388 | Msa1131930:CDS | 50.0% | |
| AAGCCGGCCTTAGGAAAGTA+AGG | - | chr7_3:84698378-84698397 | Msa1131930:CDS | 50.0% | |
| CGTGGAGAAGAAGGAAGTAG+TGG | - | chr7_3:84698446-84698465 | Msa1131930:CDS | 50.0% | |
| CACTTGAATCCTCATTCCCC+CGG | + | chr7_3:84698553-84698572 | None:intergenic | 50.0% | |
| ACTTTGGCCTCTGCAAATGC+TGG | - | chr7_3:84698596-84698615 | Msa1131930:CDS | 50.0% | |
| TGATCCTCCAGCATTTGCAG+AGG | + | chr7_3:84698606-84698625 | None:intergenic | 50.0% | |
| CAAAGCGCAGCATACTTCCA+TGG | - | chr7_3:84698768-84698787 | Msa1131930:CDS | 50.0% | |
| GCATACTTCCATGGAGGAAG+AGG | - | chr7_3:84698777-84698796 | Msa1131930:CDS | 50.0% | |
| AAAGAGATCACTAGCCGCGA+TGG | - | chr7_3:84699182-84699201 | Msa1131930:intron | 50.0% | |
| CAAGCTTCATGTGACCATCG+CGG | + | chr7_3:84699199-84699218 | None:intergenic | 50.0% | |
| CTGTCGAACTGGGACTTTAG+GGG | + | chr7_3:84699341-84699360 | None:intergenic | 50.0% | |
| GACTGTCGAACTGGGACTTT+AGG | + | chr7_3:84699343-84699362 | None:intergenic | 50.0% | |
| TTCGAGAAGGCTCCTCAGAA+TGG | - | chr7_3:84699366-84699385 | Msa1131930:intron | 50.0% | |
| GCGTAGGTTTCTCCATTCTG+AGG | + | chr7_3:84699381-84699400 | None:intergenic | 50.0% | |
| TACAGGTCTCATTGTCGCGT+AGG | + | chr7_3:84699397-84699416 | None:intergenic | 50.0% | |
| TTGCCAGGAACAACAGAGAG+CGG | + | chr7_3:84699479-84699498 | None:intergenic | 50.0% | |
| TCATCCAGAAGGAATGGACG+AGG | - | chr7_3:84699517-84699536 | Msa1131930:intron | 50.0% | |
| CTTTCCTCGTCCATTCCTTC+TGG | + | chr7_3:84699524-84699543 | None:intergenic | 50.0% | |
| CATGAGTGTCTCACCAATGG+TGG | - | chr7_3:84699608-84699627 | Msa1131930:intron | 50.0% | |
| TCATTGACACATTGGGGGAG+AGG | - | chr7_3:84699702-84699721 | Msa1131930:intron | 50.0% | |
| AAGAGGAGGTTGTCTGCAGA+GGG | - | chr7_3:84699924-84699943 | Msa1131930:CDS | 50.0% | |
| TCAGCCTGCAACTCTCTGAT+GGG | + | chr7_3:84699995-84700014 | None:intergenic | 50.0% | |
| ATCAGCCTGCAACTCTCTGA+TGG | + | chr7_3:84699996-84700015 | None:intergenic | 50.0% | |
| ATCAACAACAACTCCTGCGG+TGG | - | chr7_3:84700099-84700118 | Msa1131930:CDS | 50.0% | |
| AGATGATGAGGTGGCGTCCA+TGG | - | chr7_3:84696924-84696943 | Msa1131930:CDS | 55.0% | |
| CGACGAAACCAGCAGAAACG+TGG | + | chr7_3:84697141-84697160 | None:intergenic | 55.0% | |
| ! | TGAGCCGATGGTGATGACAC+AGG | + | chr7_3:84698311-84698330 | None:intergenic | 55.0% |
| AAATCAGAAAAGGCGGGCCG+TGG | - | chr7_3:84698428-84698447 | Msa1131930:CDS | 55.0% | |
| AGATTCAGACCGGGGGAATG+AGG | - | chr7_3:84698541-84698560 | Msa1131930:CDS | 55.0% | |
| TTGGCCTCTGCAAATGCTGG+AGG | - | chr7_3:84698599-84698618 | Msa1131930:CDS | 55.0% | |
| ATATGCGAACGCCCAGCATC+AGG | + | chr7_3:84698701-84698720 | None:intergenic | 55.0% | |
| TGATGCTGGGCGTTCGCATA+TGG | - | chr7_3:84698700-84698719 | Msa1131930:CDS | 55.0% | |
| AGCGCAGCATACTTCCATGG+AGG | - | chr7_3:84698771-84698790 | Msa1131930:CDS | 55.0% | |
| AAGGCCTATGCTGAAGACGG+TGG | - | chr7_3:84698827-84698846 | Msa1131930:intron | 55.0% | |
| AGGCCTATGCTGAAGACGGT+GGG | - | chr7_3:84698828-84698847 | Msa1131930:intron | 55.0% | |
| TGATCAACGCAGTGAACGCG+CGG | - | chr7_3:84699244-84699263 | Msa1131930:intron | 55.0% | |
| TTGGGGGAGAGGCTTCATGA+AGG | - | chr7_3:84699713-84699732 | Msa1131930:intron | 55.0% | |
| GAAGAGGAGGTTGTCTGCAG+AGG | - | chr7_3:84699923-84699942 | Msa1131930:CDS | 55.0% | |
| TAGTGTGTCTGCTGCAGCCA+TGG | + | chr7_3:84700131-84700150 | None:intergenic | 55.0% | |
| GGCCTATGCTGAAGACGGTG+GGG | - | chr7_3:84698829-84698848 | Msa1131930:intron | 60.0% | |
| GTCCCCACCGTCTTCAGCAT+AGG | + | chr7_3:84698834-84698853 | None:intergenic | 60.0% | |
| CGTCCGCTCTCTGTTGTTCC+TGG | - | chr7_3:84699473-84699492 | Msa1131930:intron | 60.0% | |
| GGAGGTTGTCTGCAGAGGGA+AGG | - | chr7_3:84699928-84699947 | Msa1131930:CDS | 60.0% | |
| TCCTGCGGTGGAAGCAACCA+TGG | - | chr7_3:84700111-84700130 | Msa1131930:CDS | 60.0% | |
| !! | TTGGTGACGAGTGGCGGCCA+TGG | + | chr7_3:84696944-84696963 | None:intergenic | 65.0% |
| AAGGCGGGCCGTGGAGAAGA+AGG | - | chr7_3:84698437-84698456 | Msa1131930:CDS | 65.0% | |
| TCAACGCAGTGAACGCGCGG+CGG | - | chr7_3:84699247-84699266 | Msa1131930:intron | 65.0% | |
| GCCATGGTTGCTTCCACCGC+AGG | + | chr7_3:84700115-84700134 | None:intergenic | 65.0% | |
| TGCGACGGAGCCTCGTCGCA+AGG | + | chr7_3:84697083-84697102 | None:intergenic | 70.0% | |
| CAACGCAGTGAACGCGCGGC+GGG | - | chr7_3:84699248-84699267 | Msa1131930:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 84696914 | 84700180 | 84696914 | ID=Msa1131930;Name=Msa1131930 |
| chr7_3 | mRNA | 84696914 | 84700180 | 84696914 | ID=Msa1131930-mRNA-1;Parent=Msa1131930;Name=Msa1131930-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.66|0|1|1|1|4|0|742 |
| chr7_3 | exon | 84699833 | 84700180 | 84699833 | ID=Msa1131930-mRNA-1:exon:25243;Parent=Msa1131930-mRNA-1 |
| chr7_3 | exon | 84698963 | 84699118 | 84698963 | ID=Msa1131930-mRNA-1:exon:25242;Parent=Msa1131930-mRNA-1 |
| chr7_3 | exon | 84698181 | 84698834 | 84698181 | ID=Msa1131930-mRNA-1:exon:25241;Parent=Msa1131930-mRNA-1 |
| chr7_3 | exon | 84696914 | 84697984 | 84696914 | ID=Msa1131930-mRNA-1:exon:25240;Parent=Msa1131930-mRNA-1 |
| chr7_3 | CDS | 84699833 | 84700180 | 84699833 | ID=Msa1131930-mRNA-1:cds;Parent=Msa1131930-mRNA-1 |
| chr7_3 | CDS | 84698963 | 84699118 | 84698963 | ID=Msa1131930-mRNA-1:cds;Parent=Msa1131930-mRNA-1 |
| chr7_3 | CDS | 84698181 | 84698834 | 84698181 | ID=Msa1131930-mRNA-1:cds;Parent=Msa1131930-mRNA-1 |
| chr7_3 | CDS | 84696914 | 84697984 | 84696914 | ID=Msa1131930-mRNA-1:cds;Parent=Msa1131930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
