Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166740 | XP_013450234.1 | 95.962 | 743 | 28 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166740 | A0A072U3F5 | 95.962 | 743 | 28 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1080880 | Msa1166740 | 0.874183 | 8.241601e-68 | -8.615850e-47 |
| Msa1082410 | Msa1166740 | 0.803838 | 2.879030e-49 | -8.615850e-47 |
| Msa1119020 | Msa1166740 | 0.917541 | 4.681446e-86 | -8.615850e-47 |
| Msa1131930 | Msa1166740 | 0.879821 | 9.112422e-70 | -8.615850e-47 |
| Msa1166740 | Msa1380320 | 0.874880 | 4.778056e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166740 | MtrunA17_Chr7g0267631 | 95.962 | 743 | 28 | 2 | 1 | 742 | 1 | 742 | 0.0 | 1432 |
| Msa1166740 | MtrunA17_Chr1g0176961 | 59.073 | 777 | 259 | 17 | 1 | 742 | 1 | 753 | 0.0 | 846 |
| Msa1166740 | MtrunA17_Chr3g0137731 | 48.684 | 304 | 124 | 6 | 408 | 708 | 323 | 597 | 1.31e-81 | 272 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1166740 | AT3G11760.1 | 52.639 | 758 | 246 | 23 | 1 | 709 | 1 | 694 | 0.0 | 683 |
| Msa1166740 | AT5G04860.1 | 44.403 | 795 | 349 | 27 | 1 | 737 | 1 | 760 | 1.21e-177 | 528 |
| Msa1166740 | AT5G04860.2 | 47.209 | 627 | 267 | 20 | 150 | 737 | 8 | 609 | 3.59e-150 | 452 |
| Msa1166740 | AT2G10560.1 | 50.187 | 267 | 107 | 9 | 484 | 736 | 3 | 257 | 6.95e-68 | 225 |
| Msa1166740 | AT2G25460.2 | 44.300 | 307 | 122 | 4 | 408 | 711 | 282 | 542 | 1.20e-65 | 228 |
| Msa1166740 | AT2G25460.1 | 51.748 | 143 | 63 | 2 | 408 | 549 | 282 | 419 | 4.11e-29 | 121 |
Find 159 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTAGCGCTTCAGATTAAA+TGG | 0.216187 | 7_4:+58841196 | Msa1166740:CDS |
| CAATGTCTTTCGACAACATT+TGG | 0.231091 | 7_4:+58843741 | Msa1166740:CDS |
| TCACAGAATTTGTATCTTCT+AGG | 0.236134 | 7_4:+58842582 | Msa1166740:CDS |
| CTTTCCTCGTCCATTCCTTC+TGG | 0.245300 | 7_4:-58843698 | None:intergenic |
| GTTGGGAATTCATTCCATTA+TGG | 0.256333 | 7_4:+58842749 | Msa1166740:CDS |
| TTTGCACTTTGTGATAAATA+AGG | 0.260128 | 7_4:-58842926 | None:intergenic |
| TCAATTGATCAGACCAGTTT+TGG | 0.293862 | 7_4:+58842228 | Msa1166740:CDS |
| GACTGTCGAACTGGGACTTT+AGG | 0.304229 | 7_4:-58843517 | None:intergenic |
| TTTGAAGAAGATTGACGTAT+AGG | 0.315711 | 7_4:-58841174 | None:intergenic |
| ATGGAGGAAGAGGAAGTTTA+GGG | 0.329597 | 7_4:+58842964 | Msa1166740:CDS |
| GTTCCTGGCAAATCCTTCAT+TGG | 0.348050 | 7_4:+58843665 | Msa1166740:CDS |
| ACTGTCGAACTGGGACTTTA+GGG | 0.351450 | 7_4:-58843516 | None:intergenic |
| CATGGAGGAAGAGGAAGTTT+AGG | 0.356353 | 7_4:+58842963 | Msa1166740:CDS |
| CTCGAATTAGACTGTCGAAC+TGG | 0.358791 | 7_4:-58843526 | None:intergenic |
| CGTCCGCTCTCTGTTGTTCC+TGG | 0.365341 | 7_4:+58843650 | Msa1166740:CDS |
| TTCATTCCATTATGGAACTT+TGG | 0.376536 | 7_4:+58842757 | Msa1166740:CDS |
| GCATGAAATCATGATAGTTC+TGG | 0.391849 | 7_4:-58843493 | None:intergenic |
| GTAGTGGTAGCAAGTATTCT+AGG | 0.392435 | 7_4:+58842639 | Msa1166740:CDS |
| CAGAGGCCAAAGTTCCATAA+TGG | 0.393125 | 7_4:-58842763 | None:intergenic |
| TATGTTTGTTGTTGGGAGTT+GGG | 0.393335 | 7_4:+58843331 | Msa1166740:CDS |
| TGGAATGTTCAAACCAAAAC+TGG | 0.397341 | 7_4:-58842241 | None:intergenic |
| AATTCCCATCAGAGAGTTGC+AGG | 0.397783 | 7_4:+58844165 | Msa1166740:CDS |
| AGAGTACATCAAAAGCTTCT+TGG | 0.399472 | 7_4:+58844138 | Msa1166740:CDS |
| AACTATTGCATGCCTGATGC+TGG | 0.399535 | 7_4:+58842863 | Msa1166740:CDS |
| TGATGCTGGGCGTTCGCATA+TGG | 0.400316 | 7_4:+58842877 | Msa1166740:CDS |
| ATGTAATTGTAGGGATTCAA+TGG | 0.409783 | 7_4:+58842141 | Msa1166740:intron |
| GTTCACTAGTTTCACAAGAC+TGG | 0.409902 | 7_4:+58843278 | Msa1166740:intron |
| ATATGTTTGTTGTTGGGAGT+TGG | 0.412413 | 7_4:+58843330 | Msa1166740:CDS |
| TCTAGATCAAAATGCCCATC+AGG | 0.415438 | 7_4:-58843605 | None:intergenic |
| CATCATCTTTGTAATCTCAA+TGG | 0.419230 | 7_4:+58841345 | Msa1166740:CDS |
| AAGCCGCCTAAAGAAGTTAT+CGG | 0.423411 | 7_4:+58844049 | Msa1166740:CDS |
| TTGTGATGACAAAGACATTT+GGG | 0.430469 | 7_4:+58842832 | Msa1166740:CDS |
| AACATTCCACTCACAAATCC+TGG | 0.431727 | 7_4:+58842255 | Msa1166740:CDS |
| TTGTTGCCGTAATTGCTGAT+TGG | 0.432647 | 7_4:+58843468 | Msa1166740:CDS |
| ATTGTGATGACAAAGACATT+TGG | 0.437795 | 7_4:+58842831 | Msa1166740:CDS |
| TACTACATCATTGACACATT+GGG | 0.441832 | 7_4:+58843872 | Msa1166740:CDS |
| GGAGATGATATGTTTGTTGT+TGG | 0.447708 | 7_4:+58843323 | Msa1166740:CDS |
| GATACGCCAATCTCTGAATT+CGG | 0.451330 | 7_4:+58843302 | Msa1166740:CDS |
| AGTTCTTACCTTTGAAGAGA+TGG | 0.451338 | 7_4:-58843077 | None:intergenic |
| AAGGCGGGCCGTGGAGAAGA+AGG | 0.457027 | 7_4:+58842614 | Msa1166740:CDS |
| CTGGAACCAATCAGCAATTA+CGG | 0.458400 | 7_4:-58843474 | None:intergenic |
| CTTAATGTAAAGAAACTCAT+TGG | 0.458855 | 7_4:+58841144 | Msa1166740:CDS |
| ACTTTGGCCTCTGCAAATGC+TGG | 0.460442 | 7_4:+58842773 | Msa1166740:CDS |
| AATGTCTTTCGACAACATTT+GGG | 0.464360 | 7_4:+58843742 | Msa1166740:CDS |
| GAGATGATATGTTTGTTGTT+GGG | 0.466826 | 7_4:+58843324 | Msa1166740:CDS |
| AAGCCGGCCTTAGGAAAGTA+AGG | 0.467172 | 7_4:+58842555 | Msa1166740:CDS |
| TCCTTACCGATAACTTCTTT+AGG | 0.471909 | 7_4:-58844055 | None:intergenic |
| ATATGCGAACGCCCAGCATC+AGG | 0.472606 | 7_4:-58842875 | None:intergenic |
| ATCACAATTCATTCTCGTGT+TGG | 0.485727 | 7_4:-58842816 | None:intergenic |
| GCCATGGTTGCTTCCACCGC+AGG | 0.486435 | 7_4:-58844289 | None:intergenic |
| TTCACTGCGTTGATCAATTG+AGG | 0.487309 | 7_4:-58843414 | None:intergenic |
| GAAATTACAATGACAGAGAA+AGG | 0.488541 | 7_4:+58842515 | Msa1166740:CDS |
| TTCACTAGTTTCACAAGACT+GGG | 0.489487 | 7_4:+58843279 | Msa1166740:intron |
| TAGTGTGTCTGCTGCAGCCA+TGG | 0.489598 | 7_4:-58844305 | None:intergenic |
| GAATACGACCACGTTTCTGC+TGG | 0.496760 | 7_4:+58841294 | Msa1166740:CDS |
| CAACGCAGTGAACGCGCGGC+GGG | 0.497040 | 7_4:+58843425 | Msa1166740:CDS |
| ATCAGCCTGCAACTCTCTGA+TGG | 0.499347 | 7_4:-58844170 | None:intergenic |
| AAATCAGAAAAGGCGGGCCG+TGG | 0.509759 | 7_4:+58842605 | Msa1166740:CDS |
| AATGCAGATATCAATTAGCT+TGG | 0.510003 | 7_4:+58842430 | Msa1166740:intron |
| TCATCTCCGAATTCAGAGAT+TGG | 0.510194 | 7_4:-58843308 | None:intergenic |
| GCATACTTCCATGGAGGAAG+AGG | 0.512733 | 7_4:+58842954 | Msa1166740:CDS |
| AAACCTTACTTTCCTAAGGC+CGG | 0.513408 | 7_4:-58842558 | None:intergenic |
| TTGGTGACGAGTGGCGGCCA+TGG | 0.513831 | 7_4:-58841105 | None:intergenic |
| CAATGTCTTGTTTCATCCGT+GGG | 0.515075 | 7_4:+58841380 | Msa1166740:CDS |
| TGTAGAAATCGGTTCCCTGA+TGG | 0.515160 | 7_4:+58843590 | Msa1166740:CDS |
| TTTCACAAGAGAGGCTGTCA+TGG | 0.515952 | 7_4:+58841272 | Msa1166740:CDS |
| ATCAGGGAACCGATTTCTAC+AGG | 0.520123 | 7_4:-58843588 | None:intergenic |
| GGGAATGAGGATTCAAGTGT+TGG | 0.520748 | 7_4:+58842731 | Msa1166740:CDS |
| ACAATGAGACCTGTAGAAAT+CGG | 0.521853 | 7_4:+58843579 | Msa1166740:CDS |
| GTAGAAATCGGTTCCCTGAT+GGG | 0.523344 | 7_4:+58843591 | Msa1166740:CDS |
| TTTCTTTCATCCAGAAGGAA+TGG | 0.524452 | 7_4:+58843688 | Msa1166740:CDS |
| CTAAACTTCCTCTTCCTCCA+TGG | 0.527587 | 7_4:-58842962 | None:intergenic |
| TTCGAGAAGGCTCCTCAGAA+TGG | 0.527606 | 7_4:+58843543 | Msa1166740:CDS |
| ATTGGTTTCTTTCATCCAGA+AGG | 0.527618 | 7_4:+58843683 | Msa1166740:CDS |
| GCAGATATCAATTAGCTTGG+TGG | 0.531349 | 7_4:+58842433 | Msa1166740:intron |
| GAAGAGGAGGTTGTCTGCAG+AGG | 0.532288 | 7_4:+58844100 | Msa1166740:CDS |
| CGATTTAGAAGATTCAGACC+GGG | 0.534030 | 7_4:+58842709 | Msa1166740:CDS |
| TCTTGTGAAATTTCTTGCGA+CGG | 0.536971 | 7_4:-58841259 | None:intergenic |
| TACAGGTCTCATTGTCGCGT+AGG | 0.541505 | 7_4:-58843571 | None:intergenic |
| GGAATGAGGATTCAAGTGTT+GGG | 0.544126 | 7_4:+58842732 | Msa1166740:CDS |
| TGCGACGGAGCCTCGTCGCA+AGG | 0.545916 | 7_4:-58841244 | None:intergenic |
| TGATGAATCCATCTCTTCAA+AGG | 0.548171 | 7_4:+58843069 | Msa1166740:CDS |
| GTCCCCACCGTCTTCAGCAT+AGG | 0.550462 | 7_4:-58843008 | None:intergenic |
| ATCTTCTAGGAAATCAGAAA+AGG | 0.550812 | 7_4:+58842595 | Msa1166740:CDS |
| CACTACTTCCTTCTTCTCCA+CGG | 0.552441 | 7_4:-58842622 | None:intergenic |
| AGATGATGAGGTGGCGTCCA+TGG | 0.552992 | 7_4:+58841088 | Msa1166740:CDS |
| ATTTCTTCTGATTGAGCCGA+TGG | 0.553305 | 7_4:-58842497 | None:intergenic |
| AAGAGGAGGTTGTCTGCAGA+GGG | 0.554332 | 7_4:+58844101 | Msa1166740:CDS |
| TTACTACATCATTGACACAT+TGG | 0.554779 | 7_4:+58843871 | Msa1166740:CDS |
| CGCAAGAAATTTCACAAGAG+AGG | 0.555370 | 7_4:+58841263 | Msa1166740:CDS |
| GATCTTTCTGCAATAAAAGC+CGG | 0.555462 | 7_4:+58842539 | Msa1166740:CDS |
| CACTTGAATCCTCATTCCCC+CGG | 0.560381 | 7_4:-58842727 | None:intergenic |
| GATTGCTGTGCAGAATCTCC+AGG | 0.563505 | 7_4:-58842273 | None:intergenic |
| TCAATTTGTAGTCTTTGATG+AGG | 0.565505 | 7_4:-58844220 | None:intergenic |
| GGTAGCAAGTATTCTAGGAG+TGG | 0.569478 | 7_4:+58842644 | Msa1166740:CDS |
| GCCTAAAGAAGTTATCGGTA+AGG | 0.570571 | 7_4:+58844054 | Msa1166740:CDS |
| ACGATTTAGAAGATTCAGAC+CGG | 0.570676 | 7_4:+58842708 | Msa1166740:CDS |
| ACTATTGCATGCCTGATGCT+GGG | 0.573068 | 7_4:+58842864 | Msa1166740:CDS |
| ACAATGTCTTGTTTCATCCG+TGG | 0.573090 | 7_4:+58841379 | Msa1166740:CDS |
| TCATTGACACATTGGGAGAG+AGG | 0.574349 | 7_4:+58843879 | Msa1166740:CDS |
| TCGAATTAGACTGTCGAACT+GGG | 0.575257 | 7_4:-58843525 | None:intergenic |
| TGGATGAAAGAAACCAATGA+AGG | 0.576485 | 7_4:-58843678 | None:intergenic |
| AAACCAATGAAGGATTTGCC+AGG | 0.576669 | 7_4:-58843668 | None:intergenic |
| AAGGAAGAAAGTGTTGACTT+AGG | 0.578642 | 7_4:-58841225 | None:intergenic |
| TTCTATTGAAGAGCAAGAAG+AGG | 0.579561 | 7_4:+58844084 | Msa1166740:CDS |
| TCCTGCGGTGGAAGCAACCA+TGG | 0.581159 | 7_4:+58844288 | Msa1166740:CDS |
| CAAAGCGCAGCATACTTCCA+TGG | 0.581184 | 7_4:+58842945 | Msa1166740:CDS |
| AAAGAAGTTATCGGTAAGGA+AGG | 0.581404 | 7_4:+58844058 | Msa1166740:CDS |
| AAAGAGATCACTAGCCGCGA+TGG | 0.581709 | 7_4:+58843359 | Msa1166740:CDS |
| GAAAACATGAGGTCCACCAT+TGG | 0.581782 | 7_4:-58843798 | None:intergenic |
| GGAGGTTGTCTGCAGAGGGA+AGG | 0.583123 | 7_4:+58844105 | Msa1166740:CDS |
| TTCTAGGAAATCAGAAAAGG+CGG | 0.583702 | 7_4:+58842598 | Msa1166740:CDS |
| AGGCCTATGCTGAAGACGGT+GGG | 0.586237 | 7_4:+58843005 | Msa1166740:CDS |
| GAAAGATTTGAGTTTCTTCG+CGG | 0.588708 | 7_4:+58843716 | Msa1166740:CDS |
| AATGGACTTACACAGAGTAA+AGG | 0.590140 | 7_4:-58842297 | None:intergenic |
| TATTGAAGAGCAAGAAGAGG+AGG | 0.590253 | 7_4:+58844087 | Msa1166740:CDS |
| GCGCTTCAGATTAAATGGAA+AGG | 0.591516 | 7_4:+58841201 | Msa1166740:CDS |
| AGTTCCTGTGTCATCACCAT+CGG | 0.592720 | 7_4:+58842481 | Msa1166740:CDS |
| TTACCGATAACTTCTTTAGG+CGG | 0.596458 | 7_4:-58844052 | None:intergenic |
| TCAGCCTGCAACTCTCTGAT+GGG | 0.597277 | 7_4:-58844169 | None:intergenic |
| TCTAGGAAATCAGAAAAGGC+GGG | 0.597356 | 7_4:+58842599 | Msa1166740:CDS |
| CGTGGAGAAGAAGGAAGTAG+TGG | 0.598459 | 7_4:+58842623 | Msa1166740:CDS |
| GCGTAGGTTTCTCCATTCTG+AGG | 0.601252 | 7_4:-58843555 | None:intergenic |
| AGATTGAAAGCGATTTCCCA+CGG | 0.606573 | 7_4:-58841396 | None:intergenic |
| TGATCAACGCAGTGAACGCG+CGG | 0.615289 | 7_4:+58843421 | Msa1166740:CDS |
| CATCAGGCATGCAATAGTTG+TGG | 0.616829 | 7_4:-58842859 | None:intergenic |
| GGAGTTGTTGTTGATAAACA+AGG | 0.618758 | 7_4:-58844268 | None:intergenic |
| CTGTCGAACTGGGACTTTAG+GGG | 0.621458 | 7_4:-58843515 | None:intergenic |
| GAACATGAGTGTCTCACCAA+TGG | 0.622666 | 7_4:+58843782 | Msa1166740:CDS |
| TTGGCCTCTGCAAATGCTGG+AGG | 0.623212 | 7_4:+58842776 | Msa1166740:CDS |
| ACACTTTCTTCCTTGCGACG+AGG | 0.625009 | 7_4:+58841234 | Msa1166740:CDS |
| CAACTCTCTGATGGGAATTG+CGG | 0.626152 | 7_4:-58844161 | None:intergenic |
| ATCAACAACAACTCCTGCGG+TGG | 0.626386 | 7_4:+58844276 | Msa1166740:CDS |
| TAATGGTGGTGAAGATGATG+AGG | 0.627803 | 7_4:+58841076 | None:intergenic |
| TTGGGAGAGAGGCTTCATGA+AGG | 0.634477 | 7_4:+58843890 | Msa1166740:CDS |
| CGACGAAACCAGCAGAAACG+TGG | 0.635377 | 7_4:-58841302 | None:intergenic |
| CATGAGTGTCTCACCAATGG+TGG | 0.635662 | 7_4:+58843785 | Msa1166740:CDS |
| GGCCTATGCTGAAGACGGTG+GGG | 0.638192 | 7_4:+58843006 | Msa1166740:CDS |
| AACATTTGGGACGAGATCAG+TGG | 0.639738 | 7_4:+58843755 | Msa1166740:CDS |
| AAGGCCTATGCTGAAGACGG+TGG | 0.640513 | 7_4:+58843004 | Msa1166740:CDS |
| CAGATTCAGAGCTAAGCTGT+CGG | 0.643095 | 7_4:-58843048 | None:intergenic |
| GATTTAGAAGATTCAGACCG+GGG | 0.648372 | 7_4:+58842710 | Msa1166740:CDS |
| TTCGACAGTCTAATTCGAGA+AGG | 0.648846 | 7_4:+58843530 | Msa1166740:CDS |
| CTAGATCAAAATGCCCATCA+GGG | 0.650970 | 7_4:-58843604 | None:intergenic |
| GAATCTCCAGGATTTGTGAG+TGG | 0.651109 | 7_4:-58842261 | None:intergenic |
| CAACTAACAATGAAAACATG+AGG | 0.651723 | 7_4:-58843809 | None:intergenic |
| TTTATCAACAACAACTCCTG+CGG | 0.662831 | 7_4:+58844273 | Msa1166740:CDS |
| TCATCCAGAAGGAATGGACG+AGG | 0.665308 | 7_4:+58843694 | Msa1166740:CDS |
| TGGTGGTGAAGATGATGAGG+TGG | 0.670788 | 7_4:+58841079 | Msa1166740:CDS |
| TGGAGGAAGAGGAAGTTTAG+GGG | 0.671003 | 7_4:+58842965 | Msa1166740:CDS |
| TTGCCAGGAACAACAGAGAG+CGG | 0.680350 | 7_4:-58843653 | None:intergenic |
| TCAACGCAGTGAACGCGCGG+CGG | 0.681053 | 7_4:+58843424 | Msa1166740:CDS |
| TGATCCTCCAGCATTTGCAG+AGG | 0.682683 | 7_4:-58842780 | None:intergenic |
| TGAGCCGATGGTGATGACAC+AGG | 0.701956 | 7_4:-58842485 | None:intergenic |
| TCACTAGTTTCACAAGACTG+GGG | 0.702314 | 7_4:+58843280 | Msa1166740:intron |
| ATTTAGAAGATTCAGACCGG+GGG | 0.706186 | 7_4:+58842711 | Msa1166740:CDS |
| ATAAGGCTCAGAAGAAGACG+TGG | 0.711448 | 7_4:-58842909 | None:intergenic |
| CAAGCTTCATGTGACCATCG+CGG | 0.715114 | 7_4:-58843373 | None:intergenic |
| AGCGCAGCATACTTCCATGG+AGG | 0.725294 | 7_4:+58842948 | Msa1166740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTCATTTTTTTTTTAAT+TGG | + | chr7_4:58841503-58841522 | Msa1166740:intron | 10.0% |
| !!! | GATTCATTTTTTTTTTAATT+GGG | + | chr7_4:58841504-58841523 | Msa1166740:intron | 10.0% |
| !!! | GGATTTTTTAAATAAAATAT+TGG | + | chr7_4:58841893-58841912 | Msa1166740:intron | 10.0% |
| !! | TTATATTAGAAAAATCATAA+TGG | - | chr7_4:58841985-58842004 | None:intergenic | 10.0% |
| !!! | TTTTTTTAAATGTAATTGTA+GGG | + | chr7_4:58842132-58842151 | Msa1166740:intron | 10.0% |
| !!! | AATCTTTTTTTGTTGATTTT+AGG | + | chr7_4:58841544-58841563 | Msa1166740:intron | 15.0% |
| !!! | ATCTTTTTTTGTTGATTTTA+GGG | + | chr7_4:58841545-58841564 | Msa1166740:intron | 15.0% |
| !!! | TTTTATTGTTTTTCTTTTGT+TGG | + | chr7_4:58841613-58841632 | Msa1166740:intron | 15.0% |
| !!! | TTTATTGTTTTTCTTTTGTT+GGG | + | chr7_4:58841614-58841633 | Msa1166740:intron | 15.0% |
| !!! | TTTTTATGTTTCCTAATATT+TGG | + | chr7_4:58841711-58841730 | Msa1166740:intron | 15.0% |
| !!! | GTTTTTTTAAATGTAATTGT+AGG | + | chr7_4:58842131-58842150 | Msa1166740:intron | 15.0% |
| !! | ATAATAAACTATCAACATTA+TGG | + | chr7_4:58842355-58842374 | Msa1166740:intron | 15.0% |
| !! | AAAGAAAAAGAAAGAAAAGA+TGG | - | chr7_4:58841455-58841474 | None:intergenic | 20.0% |
| !! | ACAAAAACAGATCAAATAAA+AGG | - | chr7_4:58841692-58841711 | None:intergenic | 20.0% |
| !!! | TTTTTATCATTTGATGATTG+AGG | - | chr7_4:58843980-58843999 | None:intergenic | 20.0% |
| ! | CTTAATGTAAAGAAACTCAT+TGG | + | chr7_4:58841144-58841163 | Msa1166740:CDS | 25.0% |
| ! | AAACAGATCAAATAAAAGGA+CGG | - | chr7_4:58841688-58841707 | None:intergenic | 25.0% |
| ! | TTTGACAAAAAAAACGAAGT+AGG | + | chr7_4:58841872-58841891 | Msa1166740:intron | 25.0% |
| !!! | TTATTTAATCGGTTAGTTTG+AGG | + | chr7_4:58842019-58842038 | Msa1166740:intron | 25.0% |
| ! | ATGACAATAAATTACAAGAG+AGG | - | chr7_4:58842331-58842350 | None:intergenic | 25.0% |
| ! | TTTGCACTTTGTGATAAATA+AGG | - | chr7_4:58842929-58842948 | None:intergenic | 25.0% |
| !! | CAACTTTGAGAATGAAAAAA+TGG | - | chr7_4:58843841-58843860 | None:intergenic | 25.0% |
| ! | TCAAATGATAAAAAAGCAAC+TGG | + | chr7_4:58843986-58844005 | Msa1166740:CDS | 25.0% |
| TTTGAAGAAGATTGACGTAT+AGG | - | chr7_4:58841177-58841196 | None:intergenic | 30.0% | |
| AATTAGCGCTTCAGATTAAA+TGG | + | chr7_4:58841196-58841215 | Msa1166740:CDS | 30.0% | |
| CATCATCTTTGTAATCTCAA+TGG | + | chr7_4:58841345-58841364 | Msa1166740:CDS | 30.0% | |
| ! | TTTTCTTTTGTTGGGTTTGT+AGG | + | chr7_4:58841622-58841641 | Msa1166740:intron | 30.0% |
| TTGTAGGATGGATGAAAATT+TGG | + | chr7_4:58841638-58841657 | Msa1166740:intron | 30.0% | |
| AATTTCCAGGACCAAATATT+AGG | - | chr7_4:58841725-58841744 | None:intergenic | 30.0% | |
| ! | TGTTGAAGAGAAAGTTGATT+AGG | - | chr7_4:58841760-58841779 | None:intergenic | 30.0% |
| TCTCTTCAACAATGAAGTTA+AGG | + | chr7_4:58841769-58841788 | Msa1166740:intron | 30.0% | |
| GTTAAGGTCATTAATTGAAG+AGG | + | chr7_4:58841785-58841804 | Msa1166740:intron | 30.0% | |
| ATGTAATTGTAGGGATTCAA+TGG | + | chr7_4:58842141-58842160 | Msa1166740:intron | 30.0% | |
| AATGCAGATATCAATTAGCT+TGG | + | chr7_4:58842430-58842449 | Msa1166740:intron | 30.0% | |
| GAAATTACAATGACAGAGAA+AGG | + | chr7_4:58842515-58842534 | Msa1166740:CDS | 30.0% | |
| TGAAAAACCTTACTTTCCTA+AGG | - | chr7_4:58842565-58842584 | None:intergenic | 30.0% | |
| TCACAGAATTTGTATCTTCT+AGG | + | chr7_4:58842582-58842601 | Msa1166740:CDS | 30.0% | |
| ! | ATCTTCTAGGAAATCAGAAA+AGG | + | chr7_4:58842595-58842614 | Msa1166740:CDS | 30.0% |
| TTCATTCCATTATGGAACTT+TGG | + | chr7_4:58842757-58842776 | Msa1166740:CDS | 30.0% | |
| ATTGTGATGACAAAGACATT+TGG | + | chr7_4:58842831-58842850 | Msa1166740:CDS | 30.0% | |
| TTGTGATGACAAAGACATTT+GGG | + | chr7_4:58842832-58842851 | Msa1166740:CDS | 30.0% | |
| !! | GAGATGATATGTTTGTTGTT+GGG | + | chr7_4:58843324-58843343 | Msa1166740:CDS | 30.0% |
| AATGTCTTTCGACAACATTT+GGG | + | chr7_4:58843742-58843761 | Msa1166740:CDS | 30.0% | |
| CAACTAACAATGAAAACATG+AGG | - | chr7_4:58843812-58843831 | None:intergenic | 30.0% | |
| ! | CTCATGTTTTCATTGTTAGT+TGG | + | chr7_4:58843810-58843829 | Msa1166740:CDS | 30.0% |
| TTACTACATCATTGACACAT+TGG | + | chr7_4:58843871-58843890 | Msa1166740:CDS | 30.0% | |
| TACTACATCATTGACACATT+GGG | + | chr7_4:58843872-58843891 | Msa1166740:CDS | 30.0% | |
| AATGATAAAAAAGCAACTGG+TGG | + | chr7_4:58843989-58844008 | Msa1166740:CDS | 30.0% | |
| TCAATTTGTAGTCTTTGATG+AGG | - | chr7_4:58844223-58844242 | None:intergenic | 30.0% | |
| !! | AAGGAAGAAAGTGTTGACTT+AGG | - | chr7_4:58841228-58841247 | None:intergenic | 35.0% |
| TCTTGTGAAATTTCTTGCGA+CGG | - | chr7_4:58841262-58841281 | None:intergenic | 35.0% | |
| ATTTGGATGATTCTGTGTGT+TGG | + | chr7_4:58841655-58841674 | Msa1166740:intron | 35.0% | |
| TTTGGATGATTCTGTGTGTT+GGG | + | chr7_4:58841656-58841675 | Msa1166740:intron | 35.0% | |
| TGTTTCCTAATATTTGGTCC+TGG | + | chr7_4:58841717-58841736 | Msa1166740:intron | 35.0% | |
| AAGGTCATTAATTGAAGAGG+TGG | + | chr7_4:58841788-58841807 | Msa1166740:intron | 35.0% | |
| TTAATTGAAGAGGTGGAGAT+TGG | + | chr7_4:58841795-58841814 | Msa1166740:intron | 35.0% | |
| !! | CTTTCCCTTTCAGTTTTATG+CGG | + | chr7_4:58841918-58841937 | Msa1166740:intron | 35.0% |
| ACTACCGCATAAAACTGAAA+GGG | - | chr7_4:58841925-58841944 | None:intergenic | 35.0% | |
| TACTACCGCATAAAACTGAA+AGG | - | chr7_4:58841926-58841945 | None:intergenic | 35.0% | |
| AATGGAAGCCCAAGAAAAAA+GGG | + | chr7_4:58842159-58842178 | Msa1166740:CDS | 35.0% | |
| !!! | CAACAGTACCCTTTTTTCTT+GGG | - | chr7_4:58842170-58842189 | None:intergenic | 35.0% |
| !!! | ACAACAGTACCCTTTTTTCT+TGG | - | chr7_4:58842171-58842190 | None:intergenic | 35.0% |
| !! | AGAAAAAAGGGTACTGTTGT+TGG | + | chr7_4:58842171-58842190 | Msa1166740:CDS | 35.0% |
| ! | TCAATTGATCAGACCAGTTT+TGG | + | chr7_4:58842228-58842247 | Msa1166740:CDS | 35.0% |
| TGGAATGTTCAAACCAAAAC+TGG | - | chr7_4:58842244-58842263 | None:intergenic | 35.0% | |
| ! | AATGGACTTACACAGAGTAA+AGG | - | chr7_4:58842300-58842319 | None:intergenic | 35.0% |
| ACAAGAGAGGATTAACTGAA+TGG | - | chr7_4:58842318-58842337 | None:intergenic | 35.0% | |
| GATCTTTCTGCAATAAAAGC+CGG | + | chr7_4:58842539-58842558 | Msa1166740:CDS | 35.0% | |
| ! | TTCTAGGAAATCAGAAAAGG+CGG | + | chr7_4:58842598-58842617 | Msa1166740:CDS | 35.0% |
| ACGATTTAGAAGATTCAGAC+CGG | + | chr7_4:58842708-58842727 | Msa1166740:CDS | 35.0% | |
| GTTGGGAATTCATTCCATTA+TGG | + | chr7_4:58842749-58842768 | Msa1166740:CDS | 35.0% | |
| ATCACAATTCATTCTCGTGT+TGG | - | chr7_4:58842819-58842838 | None:intergenic | 35.0% | |
| !!! | GCATAGGCCTTTTTTAACAA+TGG | - | chr7_4:58842995-58843014 | None:intergenic | 35.0% |
| TGATGAATCCATCTCTTCAA+AGG | + | chr7_4:58843069-58843088 | Msa1166740:CDS | 35.0% | |
| ! | AGTTCTTACCTTTGAAGAGA+TGG | - | chr7_4:58843080-58843099 | None:intergenic | 35.0% |
| ! | TTCACTAGTTTCACAAGACT+GGG | + | chr7_4:58843279-58843298 | Msa1166740:intron | 35.0% |
| !! | GGAGATGATATGTTTGTTGT+TGG | + | chr7_4:58843323-58843342 | Msa1166740:CDS | 35.0% |
| !! | ATATGTTTGTTGTTGGGAGT+TGG | + | chr7_4:58843330-58843349 | Msa1166740:CDS | 35.0% |
| !! | TATGTTTGTTGTTGGGAGTT+GGG | + | chr7_4:58843331-58843350 | Msa1166740:CDS | 35.0% |
| GCATGAAATCATGATAGTTC+TGG | - | chr7_4:58843496-58843515 | None:intergenic | 35.0% | |
| ACAATGAGACCTGTAGAAAT+CGG | + | chr7_4:58843579-58843598 | Msa1166740:CDS | 35.0% | |
| TGGATGAAAGAAACCAATGA+AGG | - | chr7_4:58843681-58843700 | None:intergenic | 35.0% | |
| ! | ATTGGTTTCTTTCATCCAGA+AGG | + | chr7_4:58843683-58843702 | Msa1166740:CDS | 35.0% |
| TTTCTTTCATCCAGAAGGAA+TGG | + | chr7_4:58843688-58843707 | Msa1166740:CDS | 35.0% | |
| ! | GAAAGATTTGAGTTTCTTCG+CGG | + | chr7_4:58843716-58843735 | Msa1166740:CDS | 35.0% |
| CAATGTCTTTCGACAACATT+TGG | + | chr7_4:58843741-58843760 | Msa1166740:CDS | 35.0% | |
| !! | CTGTGTTGCTGTCAAATTTT+AGG | - | chr7_4:58843934-58843953 | None:intergenic | 35.0% |
| TTACCGATAACTTCTTTAGG+CGG | - | chr7_4:58844055-58844074 | None:intergenic | 35.0% | |
| TCCTTACCGATAACTTCTTT+AGG | - | chr7_4:58844058-58844077 | None:intergenic | 35.0% | |
| AAAGAAGTTATCGGTAAGGA+AGG | + | chr7_4:58844058-58844077 | Msa1166740:CDS | 35.0% | |
| TTCTATTGAAGAGCAAGAAG+AGG | + | chr7_4:58844084-58844103 | Msa1166740:CDS | 35.0% | |
| AGAGTACATCAAAAGCTTCT+TGG | + | chr7_4:58844138-58844157 | Msa1166740:CDS | 35.0% | |
| ! | GGAGTTGTTGTTGATAAACA+AGG | - | chr7_4:58844271-58844290 | None:intergenic | 35.0% |
| TTTATCAACAACAACTCCTG+CGG | + | chr7_4:58844273-58844292 | Msa1166740:CDS | 35.0% | |
| !!! | TGATACTTTTTGGTGACGAG+TGG | - | chr7_4:58841117-58841136 | None:intergenic | 40.0% |
| !! | TCACCAAAAAGTATCACGTC+AGG | + | chr7_4:58841121-58841140 | Msa1166740:CDS | 40.0% |
| ! | AAGCCTGACGTGATACTTTT+TGG | - | chr7_4:58841127-58841146 | None:intergenic | 40.0% |
| GCGCTTCAGATTAAATGGAA+AGG | + | chr7_4:58841201-58841220 | Msa1166740:CDS | 40.0% | |
| CGCAAGAAATTTCACAAGAG+AGG | + | chr7_4:58841263-58841282 | Msa1166740:CDS | 40.0% | |
| !! | ACAATGTCTTGTTTCATCCG+TGG | + | chr7_4:58841379-58841398 | Msa1166740:CDS | 40.0% |
| !! | CAATGTCTTGTTTCATCCGT+GGG | + | chr7_4:58841380-58841399 | Msa1166740:CDS | 40.0% |
| AGATTGAAAGCGATTTCCCA+CGG | - | chr7_4:58841399-58841418 | None:intergenic | 40.0% | |
| ! | CTTTTGTTGGGTTTGTAGGA+TGG | + | chr7_4:58841626-58841645 | Msa1166740:intron | 40.0% |
| GTGTGACACAACAAATTTCC+AGG | - | chr7_4:58841738-58841757 | None:intergenic | 40.0% | |
| ! | GCGGTAGTAGTTGACTTATT+TGG | + | chr7_4:58841937-58841956 | Msa1166740:intron | 40.0% |
| CAATGGAAGCCCAAGAAAAA+AGG | + | chr7_4:58842158-58842177 | Msa1166740:CDS | 40.0% | |
| AACATTCCACTCACAAATCC+TGG | + | chr7_4:58842255-58842274 | Msa1166740:CDS | 40.0% | |
| ! | GCAGATATCAATTAGCTTGG+TGG | + | chr7_4:58842433-58842452 | Msa1166740:intron | 40.0% |
| ATTTCTTCTGATTGAGCCGA+TGG | - | chr7_4:58842500-58842519 | None:intergenic | 40.0% | |
| AAACCTTACTTTCCTAAGGC+CGG | - | chr7_4:58842561-58842580 | None:intergenic | 40.0% | |
| TCTAGGAAATCAGAAAAGGC+GGG | + | chr7_4:58842599-58842618 | Msa1166740:CDS | 40.0% | |
| GTAGTGGTAGCAAGTATTCT+AGG | + | chr7_4:58842639-58842658 | Msa1166740:CDS | 40.0% | |
| CGATTTAGAAGATTCAGACC+GGG | + | chr7_4:58842709-58842728 | Msa1166740:CDS | 40.0% | |
| GATTTAGAAGATTCAGACCG+GGG | + | chr7_4:58842710-58842729 | Msa1166740:CDS | 40.0% | |
| ATTTAGAAGATTCAGACCGG+GGG | + | chr7_4:58842711-58842730 | Msa1166740:CDS | 40.0% | |
| GGAATGAGGATTCAAGTGTT+GGG | + | chr7_4:58842732-58842751 | Msa1166740:CDS | 40.0% | |
| ATGGAGGAAGAGGAAGTTTA+GGG | + | chr7_4:58842964-58842983 | Msa1166740:CDS | 40.0% | |
| GGGAGAGCCATTGTTAAAAA+AGG | + | chr7_4:58842985-58843004 | Msa1166740:CDS | 40.0% | |
| AAAAAGGCCTATGCTGAAGA+CGG | + | chr7_4:58843001-58843020 | Msa1166740:CDS | 40.0% | |
| ! | GTTCACTAGTTTCACAAGAC+TGG | + | chr7_4:58843278-58843297 | Msa1166740:intron | 40.0% |
| ! | TCACTAGTTTCACAAGACTG+GGG | + | chr7_4:58843280-58843299 | Msa1166740:intron | 40.0% |
| GATACGCCAATCTCTGAATT+CGG | + | chr7_4:58843302-58843321 | Msa1166740:CDS | 40.0% | |
| TCATCTCCGAATTCAGAGAT+TGG | - | chr7_4:58843311-58843330 | None:intergenic | 40.0% | |
| ! | TTCACTGCGTTGATCAATTG+AGG | - | chr7_4:58843417-58843436 | None:intergenic | 40.0% |
| TTGTTGCCGTAATTGCTGAT+TGG | + | chr7_4:58843468-58843487 | Msa1166740:CDS | 40.0% | |
| CTGGAACCAATCAGCAATTA+CGG | - | chr7_4:58843477-58843496 | None:intergenic | 40.0% | |
| TCGAATTAGACTGTCGAACT+GGG | - | chr7_4:58843528-58843547 | None:intergenic | 40.0% | |
| TTCGACAGTCTAATTCGAGA+AGG | + | chr7_4:58843530-58843549 | Msa1166740:CDS | 40.0% | |
| CTAGATCAAAATGCCCATCA+GGG | - | chr7_4:58843607-58843626 | None:intergenic | 40.0% | |
| TCTAGATCAAAATGCCCATC+AGG | - | chr7_4:58843608-58843627 | None:intergenic | 40.0% | |
| AAACCAATGAAGGATTTGCC+AGG | - | chr7_4:58843671-58843690 | None:intergenic | 40.0% | |
| ATAAAAAAGCAACTGGTGGC+TGG | + | chr7_4:58843993-58844012 | Msa1166740:CDS | 40.0% | |
| AAGCCGCCTAAAGAAGTTAT+CGG | + | chr7_4:58844049-58844068 | Msa1166740:CDS | 40.0% | |
| GCCTAAAGAAGTTATCGGTA+AGG | + | chr7_4:58844054-58844073 | Msa1166740:CDS | 40.0% | |
| TATTGAAGAGCAAGAAGAGG+AGG | + | chr7_4:58844087-58844106 | Msa1166740:CDS | 40.0% | |
| !!! | TACTTTTTGGTGACGAGTGG+CGG | - | chr7_4:58841114-58841133 | None:intergenic | 45.0% |
| TTTCACAAGAGAGGCTGTCA+TGG | + | chr7_4:58841272-58841291 | Msa1166740:CDS | 45.0% | |
| GAATCTCCAGGATTTGTGAG+TGG | - | chr7_4:58842264-58842283 | None:intergenic | 45.0% | |
| AGTTCCTGTGTCATCACCAT+CGG | + | chr7_4:58842481-58842500 | Msa1166740:CDS | 45.0% | |
| CACTACTTCCTTCTTCTCCA+CGG | - | chr7_4:58842625-58842644 | None:intergenic | 45.0% | |
| ! | GGTAGCAAGTATTCTAGGAG+TGG | + | chr7_4:58842644-58842663 | Msa1166740:CDS | 45.0% |
| GGGAATGAGGATTCAAGTGT+TGG | + | chr7_4:58842731-58842750 | Msa1166740:CDS | 45.0% | |
| CAGAGGCCAAAGTTCCATAA+TGG | - | chr7_4:58842766-58842785 | None:intergenic | 45.0% | |
| CATCAGGCATGCAATAGTTG+TGG | - | chr7_4:58842862-58842881 | None:intergenic | 45.0% | |
| AACTATTGCATGCCTGATGC+TGG | + | chr7_4:58842863-58842882 | Msa1166740:CDS | 45.0% | |
| ACTATTGCATGCCTGATGCT+GGG | + | chr7_4:58842864-58842883 | Msa1166740:CDS | 45.0% | |
| ATAAGGCTCAGAAGAAGACG+TGG | - | chr7_4:58842912-58842931 | None:intergenic | 45.0% | |
| CTAAACTTCCTCTTCCTCCA+TGG | - | chr7_4:58842965-58842984 | None:intergenic | 45.0% | |
| CATGGAGGAAGAGGAAGTTT+AGG | + | chr7_4:58842963-58842982 | Msa1166740:CDS | 45.0% | |
| TGGAGGAAGAGGAAGTTTAG+GGG | + | chr7_4:58842965-58842984 | Msa1166740:CDS | 45.0% | |
| CAGATTCAGAGCTAAGCTGT+CGG | - | chr7_4:58843051-58843070 | None:intergenic | 45.0% | |
| ACTGTCGAACTGGGACTTTA+GGG | - | chr7_4:58843519-58843538 | None:intergenic | 45.0% | |
| CTCGAATTAGACTGTCGAAC+TGG | - | chr7_4:58843529-58843548 | None:intergenic | 45.0% | |
| ! | ATCAGGGAACCGATTTCTAC+AGG | - | chr7_4:58843591-58843610 | None:intergenic | 45.0% |
| ! | TGTAGAAATCGGTTCCCTGA+TGG | + | chr7_4:58843590-58843609 | Msa1166740:CDS | 45.0% |
| ! | GTAGAAATCGGTTCCCTGAT+GGG | + | chr7_4:58843591-58843610 | Msa1166740:CDS | 45.0% |
| !! | GCGGACGTATTTTTGCTTCA+AGG | - | chr7_4:58843637-58843656 | None:intergenic | 45.0% |
| GTTCCTGGCAAATCCTTCAT+TGG | + | chr7_4:58843665-58843684 | Msa1166740:CDS | 45.0% | |
| ! | AACATTTGGGACGAGATCAG+TGG | + | chr7_4:58843755-58843774 | Msa1166740:CDS | 45.0% |
| GAACATGAGTGTCTCACCAA+TGG | + | chr7_4:58843782-58843801 | Msa1166740:CDS | 45.0% | |
| GAAAACATGAGGTCCACCAT+TGG | - | chr7_4:58843801-58843820 | None:intergenic | 45.0% | |
| TCATTGACACATTGGGAGAG+AGG | + | chr7_4:58843879-58843898 | Msa1166740:CDS | 45.0% | |
| CAACTCTCTGATGGGAATTG+CGG | - | chr7_4:58844164-58844183 | None:intergenic | 45.0% | |
| AATTCCCATCAGAGAGTTGC+AGG | + | chr7_4:58844165-58844184 | Msa1166740:CDS | 45.0% | |
| !!! | TTTATTTATTGTTATTTAAT+CGG | + | chr7_4:58842008-58842027 | Msa1166740:intron | 5.0% |
| ! | TGGTGGTGAAGATGATGAGG+TGG | + | chr7_4:58841079-58841098 | Msa1166740:CDS | 50.0% |
| ACACTTTCTTCCTTGCGACG+AGG | + | chr7_4:58841234-58841253 | Msa1166740:CDS | 50.0% | |
| GAATACGACCACGTTTCTGC+TGG | + | chr7_4:58841294-58841313 | Msa1166740:CDS | 50.0% | |
| GATTGCTGTGCAGAATCTCC+AGG | - | chr7_4:58842276-58842295 | None:intergenic | 50.0% | |
| CTGCAATAAAAGCCGGCCTT+AGG | + | chr7_4:58842546-58842565 | Msa1166740:CDS | 50.0% | |
| AAGCCGGCCTTAGGAAAGTA+AGG | + | chr7_4:58842555-58842574 | Msa1166740:CDS | 50.0% | |
| CGTGGAGAAGAAGGAAGTAG+TGG | + | chr7_4:58842623-58842642 | Msa1166740:CDS | 50.0% | |
| CACTTGAATCCTCATTCCCC+CGG | - | chr7_4:58842730-58842749 | None:intergenic | 50.0% | |
| ACTTTGGCCTCTGCAAATGC+TGG | + | chr7_4:58842773-58842792 | Msa1166740:CDS | 50.0% | |
| TGATCCTCCAGCATTTGCAG+AGG | - | chr7_4:58842783-58842802 | None:intergenic | 50.0% | |
| CAAAGCGCAGCATACTTCCA+TGG | + | chr7_4:58842945-58842964 | Msa1166740:CDS | 50.0% | |
| GCATACTTCCATGGAGGAAG+AGG | + | chr7_4:58842954-58842973 | Msa1166740:CDS | 50.0% | |
| AAAGAGATCACTAGCCGCGA+TGG | + | chr7_4:58843359-58843378 | Msa1166740:CDS | 50.0% | |
| CAAGCTTCATGTGACCATCG+CGG | - | chr7_4:58843376-58843395 | None:intergenic | 50.0% | |
| CTGTCGAACTGGGACTTTAG+GGG | - | chr7_4:58843518-58843537 | None:intergenic | 50.0% | |
| GACTGTCGAACTGGGACTTT+AGG | - | chr7_4:58843520-58843539 | None:intergenic | 50.0% | |
| TTCGAGAAGGCTCCTCAGAA+TGG | + | chr7_4:58843543-58843562 | Msa1166740:CDS | 50.0% | |
| GCGTAGGTTTCTCCATTCTG+AGG | - | chr7_4:58843558-58843577 | None:intergenic | 50.0% | |
| TACAGGTCTCATTGTCGCGT+AGG | - | chr7_4:58843574-58843593 | None:intergenic | 50.0% | |
| TTGCCAGGAACAACAGAGAG+CGG | - | chr7_4:58843656-58843675 | None:intergenic | 50.0% | |
| TCATCCAGAAGGAATGGACG+AGG | + | chr7_4:58843694-58843713 | Msa1166740:CDS | 50.0% | |
| CTTTCCTCGTCCATTCCTTC+TGG | - | chr7_4:58843701-58843720 | None:intergenic | 50.0% | |
| CATGAGTGTCTCACCAATGG+TGG | + | chr7_4:58843785-58843804 | Msa1166740:CDS | 50.0% | |
| TTGGGAGAGAGGCTTCATGA+AGG | + | chr7_4:58843890-58843909 | Msa1166740:CDS | 50.0% | |
| AAGAGGAGGTTGTCTGCAGA+GGG | + | chr7_4:58844101-58844120 | Msa1166740:CDS | 50.0% | |
| TCAGCCTGCAACTCTCTGAT+GGG | - | chr7_4:58844172-58844191 | None:intergenic | 50.0% | |
| ATCAGCCTGCAACTCTCTGA+TGG | - | chr7_4:58844173-58844192 | None:intergenic | 50.0% | |
| ATCAACAACAACTCCTGCGG+TGG | + | chr7_4:58844276-58844295 | Msa1166740:CDS | 50.0% | |
| AGATGATGAGGTGGCGTCCA+TGG | + | chr7_4:58841088-58841107 | Msa1166740:CDS | 55.0% | |
| CGACGAAACCAGCAGAAACG+TGG | - | chr7_4:58841305-58841324 | None:intergenic | 55.0% | |
| ! | TGAGCCGATGGTGATGACAC+AGG | - | chr7_4:58842488-58842507 | None:intergenic | 55.0% |
| AAATCAGAAAAGGCGGGCCG+TGG | + | chr7_4:58842605-58842624 | Msa1166740:CDS | 55.0% | |
| AGATTCAGACCGGGGGAATG+AGG | + | chr7_4:58842718-58842737 | Msa1166740:CDS | 55.0% | |
| TTGGCCTCTGCAAATGCTGG+AGG | + | chr7_4:58842776-58842795 | Msa1166740:CDS | 55.0% | |
| ATATGCGAACGCCCAGCATC+AGG | - | chr7_4:58842878-58842897 | None:intergenic | 55.0% | |
| TGATGCTGGGCGTTCGCATA+TGG | + | chr7_4:58842877-58842896 | Msa1166740:CDS | 55.0% | |
| AGCGCAGCATACTTCCATGG+AGG | + | chr7_4:58842948-58842967 | Msa1166740:CDS | 55.0% | |
| AAGGCCTATGCTGAAGACGG+TGG | + | chr7_4:58843004-58843023 | Msa1166740:CDS | 55.0% | |
| AGGCCTATGCTGAAGACGGT+GGG | + | chr7_4:58843005-58843024 | Msa1166740:CDS | 55.0% | |
| TGATCAACGCAGTGAACGCG+CGG | + | chr7_4:58843421-58843440 | Msa1166740:CDS | 55.0% | |
| GAAGAGGAGGTTGTCTGCAG+AGG | + | chr7_4:58844100-58844119 | Msa1166740:CDS | 55.0% | |
| TAGTGTGTCTGCTGCAGCCA+TGG | - | chr7_4:58844308-58844327 | None:intergenic | 55.0% | |
| GGCCTATGCTGAAGACGGTG+GGG | + | chr7_4:58843006-58843025 | Msa1166740:CDS | 60.0% | |
| GTCCCCACCGTCTTCAGCAT+AGG | - | chr7_4:58843011-58843030 | None:intergenic | 60.0% | |
| CGTCCGCTCTCTGTTGTTCC+TGG | + | chr7_4:58843650-58843669 | Msa1166740:CDS | 60.0% | |
| GGAGGTTGTCTGCAGAGGGA+AGG | + | chr7_4:58844105-58844124 | Msa1166740:CDS | 60.0% | |
| TCCTGCGGTGGAAGCAACCA+TGG | + | chr7_4:58844288-58844307 | Msa1166740:CDS | 60.0% | |
| !! | TTGGTGACGAGTGGCGGCCA+TGG | - | chr7_4:58841108-58841127 | None:intergenic | 65.0% |
| AAGGCGGGCCGTGGAGAAGA+AGG | + | chr7_4:58842614-58842633 | Msa1166740:CDS | 65.0% | |
| TCAACGCAGTGAACGCGCGG+CGG | + | chr7_4:58843424-58843443 | Msa1166740:CDS | 65.0% | |
| GCCATGGTTGCTTCCACCGC+AGG | - | chr7_4:58844292-58844311 | None:intergenic | 65.0% | |
| TGCGACGGAGCCTCGTCGCA+AGG | - | chr7_4:58841247-58841266 | None:intergenic | 70.0% | |
| CAACGCAGTGAACGCGCGGC+GGG | + | chr7_4:58843425-58843444 | Msa1166740:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 58841078 | 58844357 | 58841078 | ID=Msa1166740;Name=Msa1166740 |
| chr7_4 | mRNA | 58841078 | 58844357 | 58841078 | ID=Msa1166740-mRNA-1;Parent=Msa1166740;Name=Msa1166740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.66|0|1|1|1|4|0|742 |
| chr7_4 | exon | 58841078 | 58841425 | 58841078 | ID=Msa1166740-mRNA-1:exon:18130;Parent=Msa1166740-mRNA-1 |
| chr7_4 | exon | 58842153 | 58842308 | 58842153 | ID=Msa1166740-mRNA-1:exon:18131;Parent=Msa1166740-mRNA-1 |
| chr7_4 | exon | 58842437 | 58843090 | 58842437 | ID=Msa1166740-mRNA-1:exon:18132;Parent=Msa1166740-mRNA-1 |
| chr7_4 | exon | 58843287 | 58844357 | 58843287 | ID=Msa1166740-mRNA-1:exon:18133;Parent=Msa1166740-mRNA-1 |
| chr7_4 | CDS | 58841078 | 58841425 | 58841078 | ID=Msa1166740-mRNA-1:cds;Parent=Msa1166740-mRNA-1 |
| chr7_4 | CDS | 58842153 | 58842308 | 58842153 | ID=Msa1166740-mRNA-1:cds;Parent=Msa1166740-mRNA-1 |
| chr7_4 | CDS | 58842437 | 58843090 | 58842437 | ID=Msa1166740-mRNA-1:cds;Parent=Msa1166740-mRNA-1 |
| chr7_4 | CDS | 58843287 | 58844357 | 58843287 | ID=Msa1166740-mRNA-1:cds;Parent=Msa1166740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
