Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084160 | XP_013450438.1 | 99.331 | 299 | 2 | 0 | 1 | 299 | 113 | 411 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084160 | sp|F4I562|AP3M_ARATH | 76.174 | 298 | 71 | 0 | 1 | 298 | 117 | 414 | 9.38e-179 | 502 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084160 | A0A072U533 | 99.331 | 299 | 2 | 0 | 1 | 299 | 113 | 411 | 0.0 | 613 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0404700 | Msa1084160 | -0.800856 | 1.184371e-48 | -8.615850e-47 |
| Msa0982590 | Msa1084160 | -0.830405 | 2.991274e-55 | -8.615850e-47 |
| Msa1084160 | Msa1398830 | 0.918098 | 2.369511e-86 | -8.615850e-47 |
| Msa0328380 | Msa1084160 | -0.835567 | 1.556971e-56 | -8.615850e-47 |
| Msa0363170 | Msa1084160 | -0.801419 | 9.085384e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084160 | MtrunA17_Chr7g0271601 | 99.331 | 299 | 2 | 0 | 1 | 299 | 113 | 411 | 0.0 | 613 |
| Msa1084160 | MtrunA17_Chr5g0400501 | 27.744 | 328 | 198 | 10 | 1 | 298 | 119 | 437 | 9.72e-32 | 122 |
| Msa1084160 | MtrunA17_Chr5g0413081 | 25.466 | 322 | 201 | 8 | 1 | 298 | 120 | 426 | 1.17e-30 | 119 |
| Msa1084160 | MtrunA17_Chr8g0368141 | 25.231 | 325 | 198 | 9 | 1 | 298 | 120 | 426 | 2.22e-29 | 115 |
| Msa1084160 | MtrunA17_Chr3g0141861 | 23.547 | 327 | 218 | 8 | 1 | 298 | 118 | 441 | 1.11e-19 | 88.6 |
| Msa1084160 | MtrunA17_Chr5g0427331 | 24.926 | 337 | 210 | 11 | 1 | 298 | 118 | 450 | 4.00e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084160 | AT1G56590.1 | 76.174 | 298 | 71 | 0 | 1 | 298 | 117 | 414 | 9.53e-180 | 502 |
| Msa1084160 | AT1G60780.1 | 26.087 | 322 | 199 | 8 | 1 | 298 | 120 | 426 | 4.23e-32 | 123 |
| Msa1084160 | AT5G46630.1 | 27.217 | 327 | 201 | 10 | 1 | 298 | 119 | 437 | 8.42e-30 | 117 |
| Msa1084160 | AT1G10730.1 | 24.845 | 322 | 203 | 8 | 1 | 298 | 120 | 426 | 2.86e-29 | 115 |
| Msa1084160 | AT5G46630.2 | 27.419 | 310 | 189 | 9 | 1 | 282 | 119 | 420 | 2.01e-28 | 114 |
| Msa1084160 | AT4G24550.2 | 26.022 | 269 | 161 | 8 | 64 | 298 | 186 | 450 | 4.45e-20 | 90.1 |
| Msa1084160 | AT4G24550.3 | 26.368 | 201 | 120 | 5 | 64 | 237 | 186 | 385 | 6.08e-19 | 86.7 |
| Msa1084160 | AT4G24550.1 | 27.368 | 190 | 110 | 5 | 64 | 226 | 186 | 374 | 2.41e-18 | 84.7 |
Find 90 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGAATGCCAATATTTAA+TGG | 0.158262 | 7_2:+84443753 | None:intergenic |
| AAGACTTTGCTAACAATATT+TGG | 0.160199 | 7_2:+84446034 | None:intergenic |
| AACTGTGGCTTTACATATAT+TGG | 0.163939 | 7_2:+84444513 | None:intergenic |
| ATCTACATAAACTTCATTAT+TGG | 0.206034 | 7_2:+84445916 | None:intergenic |
| ACAAGTTTCAGATGACTTAA+TGG | 0.227447 | 7_2:+84443931 | None:intergenic |
| AAAATGTTTCCATTAAATAT+TGG | 0.278515 | 7_2:-84443762 | Msa1084160:three_prime_UTR |
| ATCATCTCTTGCAGGATATT+AGG | 0.289281 | 7_2:+84446064 | None:intergenic |
| AATGTGAGCGACACGCTTCC+AGG | 0.294268 | 7_2:-84445986 | Msa1084160:CDS |
| ACTGTGGCTTTACATATATT+GGG | 0.306135 | 7_2:+84444514 | None:intergenic |
| CACAAATGAAAGAATTTGAT+TGG | 0.306178 | 7_2:+84444744 | None:intergenic |
| TCCACCCTTGTGTTAGATTT+CGG | 0.307795 | 7_2:-84444777 | Msa1084160:CDS |
| CTTGTGTTAGATTTCGGCCT+TGG | 0.329672 | 7_2:-84444771 | Msa1084160:CDS |
| ACGGAATCAACTGTCTTTCC+AGG | 0.329908 | 7_2:+84444435 | None:intergenic |
| AATTTAAGCTAATGAATTAC+AGG | 0.356573 | 7_2:-84444708 | Msa1084160:intron |
| GCGGAGCTATCATCTCTTGC+AGG | 0.367041 | 7_2:+84446056 | None:intergenic |
| TTGATTCTGTACATGAGATT+TGG | 0.367165 | 7_2:-84443907 | Msa1084160:three_prime_UTR |
| CTTAGGGTCGGCTGTTCTCC+AGG | 0.381162 | 7_2:+84445943 | None:intergenic |
| GGGCTTTATCCTTTGGGATC+CGG | 0.381952 | 7_2:+84444167 | None:intergenic |
| ACTTCATTATTGGCATACTT+AGG | 0.389102 | 7_2:+84445926 | None:intergenic |
| CTTCATTATTGGCATACTTA+GGG | 0.391320 | 7_2:+84445927 | None:intergenic |
| ATTAGCTTAAATTGTCCATC+AGG | 0.393580 | 7_2:+84444718 | None:intergenic |
| TGGTCTGCAAATAGACAAAC+TGG | 0.402645 | 7_2:-84444044 | Msa1084160:CDS |
| TGTAGATCTTGTAGAACAAA+TGG | 0.407054 | 7_2:-84445900 | Msa1084160:CDS |
| TTGTGTTAGATTTCGGCCTT+GGG | 0.413114 | 7_2:-84444770 | Msa1084160:CDS |
| TTCATTCAGGGATGGTACTC+TGG | 0.434182 | 7_2:-84444905 | Msa1084160:intron |
| AAATGGATGCAACAATAAAC+AGG | 0.439022 | 7_2:-84445883 | Msa1084160:intron |
| ATCCTTTGGGATCCGGCCAA+TGG | 0.456803 | 7_2:+84444174 | None:intergenic |
| ATCATGGGTGTCGCTCTCTC+TGG | 0.456816 | 7_2:-84444064 | Msa1084160:CDS |
| CTTTCATTTGTGCCTCCTGA+TGG | 0.464169 | 7_2:-84444733 | Msa1084160:CDS |
| CTCGAAAACCTTTGTAGAAA+CGG | 0.465292 | 7_2:+84444002 | None:intergenic |
| AAGCTGAAACTGAACGTTAA+CGG | 0.467260 | 7_2:+84444416 | None:intergenic |
| GACTTCAAATTCACCTGCTC+GGG | 0.470982 | 7_2:+84443973 | None:intergenic |
| GGAACATTAGTGCTTGAGAC+TGG | 0.475763 | 7_2:-84444133 | Msa1084160:CDS |
| CCTAAAATCCACTTGAAATG+TGG | 0.478562 | 7_2:+84444087 | None:intergenic |
| GCAAATGAAAGAGTTAAATC+AGG | 0.480613 | 7_2:+84444829 | None:intergenic |
| TTTCGAGCTCTTACCCGAGC+AGG | 0.486627 | 7_2:-84443986 | Msa1084160:CDS |
| CATGCACTTGGTCCATTGGC+CGG | 0.492184 | 7_2:-84444186 | Msa1084160:CDS |
| CAGACATGCACTTGGTCCAT+TGG | 0.496290 | 7_2:-84444190 | Msa1084160:CDS |
| ATATTAGGTTCTGTAGTTAG+TGG | 0.496799 | 7_2:+84446079 | None:intergenic |
| CTAAAATCCACTTGAAATGT+GGG | 0.503832 | 7_2:+84444088 | None:intergenic |
| GTACAGCATCTTGTGTTCCC+TGG | 0.504321 | 7_2:-84445961 | Msa1084160:CDS |
| CACTAATGTTCCAGACATTG+AGG | 0.507964 | 7_2:+84444144 | None:intergenic |
| AAAGTCTTGAGCGTTGTGAC+TGG | 0.511584 | 7_2:-84446019 | Msa1084160:CDS |
| CTGGTGAAGTGTGAGATTAA+TGG | 0.523967 | 7_2:-84444886 | Msa1084160:CDS |
| TGTCTTTCCCACATTTCAAG+TGG | 0.525867 | 7_2:-84444095 | Msa1084160:CDS |
| GAGATTTGGTTGCATGTACA+TGG | 0.526688 | 7_2:-84443893 | Msa1084160:three_prime_UTR |
| ACACAAGATGCTGTACTGCC+TGG | 0.526932 | 7_2:+84445968 | None:intergenic |
| CTCACATCATCAAGGATTGA+AGG | 0.531256 | 7_2:+84444802 | None:intergenic |
| CAAGTAAATTCCCACATCAC+TGG | 0.533800 | 7_2:-84444856 | Msa1084160:CDS |
| ATTATTGGCATACTTAGGGT+CGG | 0.538133 | 7_2:+84445931 | None:intergenic |
| GAGCAGGTGAATTTGAAGTC+AGG | 0.540257 | 7_2:-84443970 | Msa1084160:CDS |
| AAAACCTTTGTAGAAACGGT+AGG | 0.541922 | 7_2:+84444006 | None:intergenic |
| TTTGGTTGCATGTACATGGC+TGG | 0.543947 | 7_2:-84443889 | Msa1084160:three_prime_UTR |
| ACTAATGTTCCAGACATTGA+GGG | 0.555481 | 7_2:+84444145 | None:intergenic |
| TGCCGTCTTAATGTAATGGT+TGG | 0.558596 | 7_2:-84444471 | Msa1084160:CDS |
| TGACTTCAAATTCACCTGCT+CGG | 0.560219 | 7_2:+84443972 | None:intergenic |
| TACTTTAGTAGTGAGTGAAA+CGG | 0.560713 | 7_2:-84443820 | Msa1084160:three_prime_UTR |
| AGAATTTGATTGGATTCCCA+AGG | 0.564413 | 7_2:+84444754 | None:intergenic |
| GTACCCTACCGTTTCTACAA+AGG | 0.567672 | 7_2:-84444010 | Msa1084160:CDS |
| AAGCCACAGTTGACTTCAGA+TGG | 0.571629 | 7_2:-84444501 | Msa1084160:CDS |
| GACATGCCGTCTTAATGTAA+TGG | 0.577164 | 7_2:-84444475 | Msa1084160:CDS |
| ACTTTGCTAACAATATTTGG+CGG | 0.578630 | 7_2:+84446037 | None:intergenic |
| CAAGGCCGAAATCTAACACA+AGG | 0.579655 | 7_2:+84444772 | None:intergenic |
| AATCAGGTAGACCAGTGATG+TGG | 0.580214 | 7_2:+84444845 | None:intergenic |
| GTTGGCATGAGAAATGATCC+TGG | 0.582165 | 7_2:-84444453 | Msa1084160:CDS |
| GCTGATCTGACTTCAACTCA+TGG | 0.582192 | 7_2:-84444375 | Msa1084160:CDS |
| AGCTTAAATTGTCCATCAGG+AGG | 0.585405 | 7_2:+84444721 | None:intergenic |
| ATCAGGTAGACCAGTGATGT+GGG | 0.586208 | 7_2:+84444846 | None:intergenic |
| AGTTAACATTCTTTCTAACA+AGG | 0.590551 | 7_2:-84444349 | Msa1084160:intron |
| GTCCATTGGCCGGATCCCAA+AGG | 0.591648 | 7_2:-84444176 | Msa1084160:CDS |
| CTGTGGCTTTACATATATTG+GGG | 0.592300 | 7_2:+84444515 | None:intergenic |
| CTTCAATCCTTGATGATGTG+AGG | 0.593007 | 7_2:-84444801 | Msa1084160:CDS |
| ATTAGTGCTTGAGACTGGAA+TGG | 0.599757 | 7_2:-84444128 | Msa1084160:CDS |
| CACAGTTGACTTCAGATGGT+GGG | 0.602716 | 7_2:-84444497 | Msa1084160:CDS |
| TGATCTATCAGACATGCACT+TGG | 0.603227 | 7_2:-84444198 | Msa1084160:intron |
| TGCCAACCATTACATTAAGA+CGG | 0.616417 | 7_2:+84444469 | None:intergenic |
| CTAATGTTCCAGACATTGAG+GGG | 0.617817 | 7_2:+84444146 | None:intergenic |
| AAACCTTTGTAGAAACGGTA+GGG | 0.621652 | 7_2:+84444007 | None:intergenic |
| GGTGGAACCTCACATCATCA+AGG | 0.621797 | 7_2:+84444794 | None:intergenic |
| AGATCAGCTGATAAGATGCA+AGG | 0.629147 | 7_2:+84444390 | None:intergenic |
| CCACAGTTGACTTCAGATGG+TGG | 0.636618 | 7_2:-84444498 | Msa1084160:CDS |
| TTAGGGTCGGCTGTTCTCCA+GGG | 0.642045 | 7_2:+84445944 | None:intergenic |
| TACTAAAGTACTTTGAAACC+AGG | 0.647916 | 7_2:+84443833 | None:intergenic |
| GCCGAAATCTAACACAAGGG+TGG | 0.652122 | 7_2:+84444776 | None:intergenic |
| CCACCATCTGAAGTCAACTG+TGG | 0.668735 | 7_2:+84444498 | None:intergenic |
| AAGGCCGAAATCTAACACAA+GGG | 0.679990 | 7_2:+84444773 | None:intergenic |
| TAATGTTCCAGACATTGAGG+GGG | 0.697874 | 7_2:+84444147 | None:intergenic |
| GAAGTGTGAGATTAATGGTG+AGG | 0.707798 | 7_2:-84444881 | Msa1084160:CDS |
| TCAGCTGATAAGATGCAAGG+AGG | 0.745768 | 7_2:+84444393 | None:intergenic |
| TTGGATGAGATGATAGACAA+TGG | 0.749272 | 7_2:-84446106 | Msa1084160:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTCTTAAAATTC+TGG | - | chr7_2:84445265-84445284 | Msa1084160:intron | 10.0% |
| !!! | TTTTATTTTCTTAAAATTCT+GGG | - | chr7_2:84445266-84445285 | Msa1084160:intron | 10.0% |
| !!! | TTTTTATTTTCTTAAAATTC+TGG | - | chr7_2:84445265-84445284 | Msa1084160:intron | 10.0% |
| !!! | TTTTATTTTCTTAAAATTCT+GGG | - | chr7_2:84445266-84445285 | Msa1084160:intron | 10.0% |
| !!! | TCTTAACTTTGATAATTTTA+TGG | - | chr7_2:84444014-84444033 | Msa1084160:CDS | 15.0% |
| !!! | CTTAACTTTGATAATTTTAT+GGG | - | chr7_2:84444015-84444034 | Msa1084160:CDS | 15.0% |
| !!! | GTCTTATTTTTAAAAATATC+TGG | - | chr7_2:84444062-84444081 | Msa1084160:CDS | 15.0% |
| !! | AATTTAATGTGTATAAGTTA+AGG | + | chr7_2:84444491-84444510 | None:intergenic | 15.0% |
| !!! | TTGTTATTATGTTTGATAAA+TGG | - | chr7_2:84444564-84444583 | Msa1084160:intron | 15.0% |
| !! | AAAATGTTTCCATTAAATAT+TGG | - | chr7_2:84446082-84446101 | Msa1084160:CDS | 15.0% |
| !!! | TCTTAACTTTGATAATTTTA+TGG | - | chr7_2:84444014-84444033 | Msa1084160:CDS | 15.0% |
| !!! | CTTAACTTTGATAATTTTAT+GGG | - | chr7_2:84444015-84444034 | Msa1084160:CDS | 15.0% |
| !!! | GTCTTATTTTTAAAAATATC+TGG | - | chr7_2:84444062-84444081 | Msa1084160:CDS | 15.0% |
| !! | AATTTAATGTGTATAAGTTA+AGG | + | chr7_2:84444491-84444510 | None:intergenic | 15.0% |
| !!! | TTGTTATTATGTTTGATAAA+TGG | - | chr7_2:84444564-84444583 | Msa1084160:intron | 15.0% |
| !! | AAAATGTTTCCATTAAATAT+TGG | - | chr7_2:84446082-84446101 | Msa1084160:CDS | 15.0% |
| !! | ATCTACATAAACTTCATTAT+TGG | + | chr7_2:84443931-84443950 | None:intergenic | 20.0% |
| !!! | AATTTATAGTAAAGCATCTT+AGG | - | chr7_2:84444507-84444526 | Msa1084160:CDS | 20.0% |
| !! | AGAAAAGAAACTAAATATCA+CGG | + | chr7_2:84444715-84444734 | None:intergenic | 20.0% |
| !! | AATTTAAGCTAATGAATTAC+AGG | - | chr7_2:84445136-84445155 | Msa1084160:intron | 20.0% |
| !!! | TTTTAGATTCAAAATACAAG+TGG | + | chr7_2:84446066-84446085 | None:intergenic | 20.0% |
| !! | ATCTACATAAACTTCATTAT+TGG | + | chr7_2:84443931-84443950 | None:intergenic | 20.0% |
| !!! | AATTTATAGTAAAGCATCTT+AGG | - | chr7_2:84444507-84444526 | Msa1084160:CDS | 20.0% |
| !! | AGAAAAGAAACTAAATATCA+CGG | + | chr7_2:84444715-84444734 | None:intergenic | 20.0% |
| !! | AATTTAAGCTAATGAATTAC+AGG | - | chr7_2:84445136-84445155 | Msa1084160:intron | 20.0% |
| !!! | TTTTAGATTCAAAATACAAG+TGG | + | chr7_2:84446066-84446085 | None:intergenic | 20.0% |
| ! | AAGACTTTGCTAACAATATT+TGG | + | chr7_2:84443813-84443832 | None:intergenic | 25.0% |
| ! | ATTTGACTAAGTTATACGTT+GGG | + | chr7_2:84444275-84444294 | None:intergenic | 25.0% |
| ! | ATAACTTAGTCAAATCCTTA+CGG | - | chr7_2:84444280-84444299 | Msa1084160:intron | 25.0% |
| !! | TTGAAAACTATTTCTCTGAT+TGG | - | chr7_2:84444376-84444395 | Msa1084160:CDS | 25.0% |
| ! | ATTATGTTTGATAAATGGCA+AGG | - | chr7_2:84444569-84444588 | Msa1084160:intron | 25.0% |
| !!! | CAAAACTTCATTTCTAGTAA+AGG | - | chr7_2:84444674-84444693 | Msa1084160:intron | 25.0% |
| ! | ATAAAATTTCAGCCGATATA+AGG | + | chr7_2:84444824-84444843 | None:intergenic | 25.0% |
| ! | ATGAAAGAAGTTGAAAGAAA+TGG | + | chr7_2:84444899-84444918 | None:intergenic | 25.0% |
| !! | CATACTTGTTGCTAAAAATT+TGG | - | chr7_2:84444916-84444935 | Msa1084160:intron | 25.0% |
| !! | CTAAAAATTTGGTTCATTCA+GGG | - | chr7_2:84444927-84444946 | Msa1084160:intron | 25.0% |
| ! | CACAAATGAAAGAATTTGAT+TGG | + | chr7_2:84445103-84445122 | None:intergenic | 25.0% |
| ! | AGTTAACATTCTTTCTAACA+AGG | - | chr7_2:84445495-84445514 | Msa1084160:intron | 25.0% |
| !! | AAGGTACTTACTTAATAAAC+AGG | - | chr7_2:84445514-84445533 | Msa1084160:intron | 25.0% |
| !!! | AAGTTGATGTATTTTTATCC+TGG | - | chr7_2:84445993-84446012 | Msa1084160:CDS | 25.0% |
| ! | TCATGAATGCCAATATTTAA+TGG | + | chr7_2:84446094-84446113 | None:intergenic | 25.0% |
| ! | AAGACTTTGCTAACAATATT+TGG | + | chr7_2:84443813-84443832 | None:intergenic | 25.0% |
| ! | ATTTGACTAAGTTATACGTT+GGG | + | chr7_2:84444275-84444294 | None:intergenic | 25.0% |
| ! | ATAACTTAGTCAAATCCTTA+CGG | - | chr7_2:84444280-84444299 | Msa1084160:intron | 25.0% |
| !! | TTGAAAACTATTTCTCTGAT+TGG | - | chr7_2:84444376-84444395 | Msa1084160:CDS | 25.0% |
| ! | ATTATGTTTGATAAATGGCA+AGG | - | chr7_2:84444569-84444588 | Msa1084160:intron | 25.0% |
| !!! | CAAAACTTCATTTCTAGTAA+AGG | - | chr7_2:84444674-84444693 | Msa1084160:intron | 25.0% |
| ! | ATAAAATTTCAGCCGATATA+AGG | + | chr7_2:84444824-84444843 | None:intergenic | 25.0% |
| ! | ATGAAAGAAGTTGAAAGAAA+TGG | + | chr7_2:84444899-84444918 | None:intergenic | 25.0% |
| !! | CATACTTGTTGCTAAAAATT+TGG | - | chr7_2:84444916-84444935 | Msa1084160:intron | 25.0% |
| !! | CTAAAAATTTGGTTCATTCA+GGG | - | chr7_2:84444927-84444946 | Msa1084160:intron | 25.0% |
| ! | CACAAATGAAAGAATTTGAT+TGG | + | chr7_2:84445103-84445122 | None:intergenic | 25.0% |
| ! | AGTTAACATTCTTTCTAACA+AGG | - | chr7_2:84445495-84445514 | Msa1084160:intron | 25.0% |
| !! | AAGGTACTTACTTAATAAAC+AGG | - | chr7_2:84445514-84445533 | Msa1084160:intron | 25.0% |
| !!! | AAGTTGATGTATTTTTATCC+TGG | - | chr7_2:84445993-84446012 | Msa1084160:CDS | 25.0% |
| ! | TCATGAATGCCAATATTTAA+TGG | + | chr7_2:84446094-84446113 | None:intergenic | 25.0% |
| ATATTAGGTTCTGTAGTTAG+TGG | + | chr7_2:84443768-84443787 | None:intergenic | 30.0% | |
| ACTTTGCTAACAATATTTGG+CGG | + | chr7_2:84443810-84443829 | None:intergenic | 30.0% | |
| CTTCATTATTGGCATACTTA+GGG | + | chr7_2:84443920-84443939 | None:intergenic | 30.0% | |
| ACTTCATTATTGGCATACTT+AGG | + | chr7_2:84443921-84443940 | None:intergenic | 30.0% | |
| TGTAGATCTTGTAGAACAAA+TGG | - | chr7_2:84443944-84443963 | Msa1084160:three_prime_UTR | 30.0% | |
| AAATGGATGCAACAATAAAC+AGG | - | chr7_2:84443961-84443980 | Msa1084160:exon | 30.0% | |
| ATAGATTATGTGTTCGACTT+CGG | - | chr7_2:84444142-84444161 | Msa1084160:CDS | 30.0% | |
| ATAATAATGCCTCCTTGAAA+AGG | + | chr7_2:84444170-84444189 | None:intergenic | 30.0% | |
| TATAAGGAGATAGTTGTGTT+AGG | - | chr7_2:84444240-84444259 | Msa1084160:intron | 30.0% | |
| ATAAGGAGATAGTTGTGTTA+GGG | - | chr7_2:84444241-84444260 | Msa1084160:intron | 30.0% | |
| GATTTGACTAAGTTATACGT+TGG | + | chr7_2:84444276-84444295 | None:intergenic | 30.0% | |
| !! | TATTTTTGCACCTCTAATCT+GGG | - | chr7_2:84444418-84444437 | Msa1084160:CDS | 30.0% |
| CATATATGAATGATTTCAGC+TGG | + | chr7_2:84444544-84444563 | None:intergenic | 30.0% | |
| GAACTTGTGAAACCTTATAT+CGG | - | chr7_2:84444809-84444828 | Msa1084160:CDS | 30.0% | |
| TGCATAAATACAGACTACTA+AGG | + | chr7_2:84444876-84444895 | None:intergenic | 30.0% | |
| ! | GCTAAAAATTTGGTTCATTC+AGG | - | chr7_2:84444926-84444945 | Msa1084160:intron | 30.0% |
| GCAAATGAAAGAGTTAAATC+AGG | + | chr7_2:84445018-84445037 | None:intergenic | 30.0% | |
| ! | ATTAGCTTAAATTGTCCATC+AGG | + | chr7_2:84445129-84445148 | None:intergenic | 30.0% |
| AACGGTTTCAAATCCTAATT+AGG | + | chr7_2:84445187-84445206 | None:intergenic | 30.0% | |
| ! | TAGGATTTGAAACCGTTATT+TGG | - | chr7_2:84445190-84445209 | Msa1084160:intron | 30.0% |
| ! | AGGATTTGAAACCGTTATTT+GGG | - | chr7_2:84445191-84445210 | Msa1084160:intron | 30.0% |
| CAATATGACTTCCCAAATAA+CGG | + | chr7_2:84445205-84445224 | None:intergenic | 30.0% | |
| GAGTGTTAAAATCTGTTTCA+TGG | - | chr7_2:84445232-84445251 | Msa1084160:intron | 30.0% | |
| ! | ACTGTGGCTTTACATATATT+GGG | + | chr7_2:84445333-84445352 | None:intergenic | 30.0% |
| ! | AACTGTGGCTTTACATATAT+TGG | + | chr7_2:84445334-84445353 | None:intergenic | 30.0% |
| ATCTGACTATTTAGACTTGA+TGG | + | chr7_2:84445575-84445594 | None:intergenic | 30.0% | |
| CTAAAATCCACTTGAAATGT+GGG | + | chr7_2:84445759-84445778 | None:intergenic | 30.0% | |
| ACAAGTTTCAGATGACTTAA+TGG | + | chr7_2:84445916-84445935 | None:intergenic | 30.0% | |
| TTGATTCTGTACATGAGATT+TGG | - | chr7_2:84445937-84445956 | Msa1084160:CDS | 30.0% | |
| !! | TACTAAAGTACTTTGAAACC+AGG | + | chr7_2:84446014-84446033 | None:intergenic | 30.0% |
| TACTTTAGTAGTGAGTGAAA+CGG | - | chr7_2:84446024-84446043 | Msa1084160:CDS | 30.0% | |
| ATATTAGGTTCTGTAGTTAG+TGG | + | chr7_2:84443768-84443787 | None:intergenic | 30.0% | |
| ACTTTGCTAACAATATTTGG+CGG | + | chr7_2:84443810-84443829 | None:intergenic | 30.0% | |
| CTTCATTATTGGCATACTTA+GGG | + | chr7_2:84443920-84443939 | None:intergenic | 30.0% | |
| ACTTCATTATTGGCATACTT+AGG | + | chr7_2:84443921-84443940 | None:intergenic | 30.0% | |
| TGTAGATCTTGTAGAACAAA+TGG | - | chr7_2:84443944-84443963 | Msa1084160:three_prime_UTR | 30.0% | |
| AAATGGATGCAACAATAAAC+AGG | - | chr7_2:84443961-84443980 | Msa1084160:exon | 30.0% | |
| ATAGATTATGTGTTCGACTT+CGG | - | chr7_2:84444142-84444161 | Msa1084160:CDS | 30.0% | |
| ATAATAATGCCTCCTTGAAA+AGG | + | chr7_2:84444170-84444189 | None:intergenic | 30.0% | |
| TATAAGGAGATAGTTGTGTT+AGG | - | chr7_2:84444240-84444259 | Msa1084160:intron | 30.0% | |
| ATAAGGAGATAGTTGTGTTA+GGG | - | chr7_2:84444241-84444260 | Msa1084160:intron | 30.0% | |
| GATTTGACTAAGTTATACGT+TGG | + | chr7_2:84444276-84444295 | None:intergenic | 30.0% | |
| !! | TATTTTTGCACCTCTAATCT+GGG | - | chr7_2:84444418-84444437 | Msa1084160:CDS | 30.0% |
| CATATATGAATGATTTCAGC+TGG | + | chr7_2:84444544-84444563 | None:intergenic | 30.0% | |
| GAACTTGTGAAACCTTATAT+CGG | - | chr7_2:84444809-84444828 | Msa1084160:CDS | 30.0% | |
| TGCATAAATACAGACTACTA+AGG | + | chr7_2:84444876-84444895 | None:intergenic | 30.0% | |
| ! | GCTAAAAATTTGGTTCATTC+AGG | - | chr7_2:84444926-84444945 | Msa1084160:intron | 30.0% |
| GCAAATGAAAGAGTTAAATC+AGG | + | chr7_2:84445018-84445037 | None:intergenic | 30.0% | |
| ! | ATTAGCTTAAATTGTCCATC+AGG | + | chr7_2:84445129-84445148 | None:intergenic | 30.0% |
| AACGGTTTCAAATCCTAATT+AGG | + | chr7_2:84445187-84445206 | None:intergenic | 30.0% | |
| ! | TAGGATTTGAAACCGTTATT+TGG | - | chr7_2:84445190-84445209 | Msa1084160:intron | 30.0% |
| ! | AGGATTTGAAACCGTTATTT+GGG | - | chr7_2:84445191-84445210 | Msa1084160:intron | 30.0% |
| CAATATGACTTCCCAAATAA+CGG | + | chr7_2:84445205-84445224 | None:intergenic | 30.0% | |
| GAGTGTTAAAATCTGTTTCA+TGG | - | chr7_2:84445232-84445251 | Msa1084160:intron | 30.0% | |
| ! | ACTGTGGCTTTACATATATT+GGG | + | chr7_2:84445333-84445352 | None:intergenic | 30.0% |
| ! | AACTGTGGCTTTACATATAT+TGG | + | chr7_2:84445334-84445353 | None:intergenic | 30.0% |
| ATCTGACTATTTAGACTTGA+TGG | + | chr7_2:84445575-84445594 | None:intergenic | 30.0% | |
| CTAAAATCCACTTGAAATGT+GGG | + | chr7_2:84445759-84445778 | None:intergenic | 30.0% | |
| ACAAGTTTCAGATGACTTAA+TGG | + | chr7_2:84445916-84445935 | None:intergenic | 30.0% | |
| TTGATTCTGTACATGAGATT+TGG | - | chr7_2:84445937-84445956 | Msa1084160:CDS | 30.0% | |
| !! | TACTAAAGTACTTTGAAACC+AGG | + | chr7_2:84446014-84446033 | None:intergenic | 30.0% |
| TACTTTAGTAGTGAGTGAAA+CGG | - | chr7_2:84446024-84446043 | Msa1084160:CDS | 30.0% | |
| TTGGATGAGATGATAGACAA+TGG | - | chr7_2:84443738-84443757 | Msa1084160:three_prime_UTR | 35.0% | |
| ATCATCTCTTGCAGGATATT+AGG | + | chr7_2:84443783-84443802 | None:intergenic | 35.0% | |
| ATTATTGGCATACTTAGGGT+CGG | + | chr7_2:84443916-84443935 | None:intergenic | 35.0% | |
| !! | GTATTTTTGCACCTCTAATC+TGG | - | chr7_2:84444417-84444436 | Msa1084160:CDS | 35.0% |
| GTGTATAAGTTAAGGACACA+AGG | + | chr7_2:84444483-84444502 | None:intergenic | 35.0% | |
| ! | AAATTTGGTTCATTCAGGGA+TGG | - | chr7_2:84444931-84444950 | Msa1084160:intron | 35.0% |
| AGAATTTGATTGGATTCCCA+AGG | + | chr7_2:84445093-84445112 | None:intergenic | 35.0% | |
| CTATGTCTGATGTCCTAATT+AGG | - | chr7_2:84445171-84445190 | Msa1084160:intron | 35.0% | |
| ! | CTGTGGCTTTACATATATTG+GGG | + | chr7_2:84445332-84445351 | None:intergenic | 35.0% |
| TGCCAACCATTACATTAAGA+CGG | + | chr7_2:84445378-84445397 | None:intergenic | 35.0% | |
| AAGCTGAAACTGAACGTTAA+CGG | + | chr7_2:84445431-84445450 | None:intergenic | 35.0% | |
| TCTGATAGATCACGATGTAA+AGG | + | chr7_2:84445638-84445657 | None:intergenic | 35.0% | |
| ACTAATGTTCCAGACATTGA+GGG | + | chr7_2:84445702-84445721 | None:intergenic | 35.0% | |
| CCTAAAATCCACTTGAAATG+TGG | + | chr7_2:84445760-84445779 | None:intergenic | 35.0% | |
| !! | CCACATTTCAAGTGGATTTT+AGG | - | chr7_2:84445757-84445776 | Msa1084160:intron | 35.0% |
| !!! | TCAAGTGGATTTTAGGATCA+TGG | - | chr7_2:84445764-84445783 | Msa1084160:intron | 35.0% |
| !!! | CAAGTGGATTTTAGGATCAT+GGG | - | chr7_2:84445765-84445784 | Msa1084160:intron | 35.0% |
| AAACCTTTGTAGAAACGGTA+GGG | + | chr7_2:84445840-84445859 | None:intergenic | 35.0% | |
| AAAACCTTTGTAGAAACGGT+AGG | + | chr7_2:84445841-84445860 | None:intergenic | 35.0% | |
| CTCGAAAACCTTTGTAGAAA+CGG | + | chr7_2:84445845-84445864 | None:intergenic | 35.0% | |
| TTGGATGAGATGATAGACAA+TGG | - | chr7_2:84443738-84443757 | Msa1084160:three_prime_UTR | 35.0% | |
| ATCATCTCTTGCAGGATATT+AGG | + | chr7_2:84443783-84443802 | None:intergenic | 35.0% | |
| ATTATTGGCATACTTAGGGT+CGG | + | chr7_2:84443916-84443935 | None:intergenic | 35.0% | |
| !! | GTATTTTTGCACCTCTAATC+TGG | - | chr7_2:84444417-84444436 | Msa1084160:CDS | 35.0% |
| GTGTATAAGTTAAGGACACA+AGG | + | chr7_2:84444483-84444502 | None:intergenic | 35.0% | |
| ! | AAATTTGGTTCATTCAGGGA+TGG | - | chr7_2:84444931-84444950 | Msa1084160:intron | 35.0% |
| AGAATTTGATTGGATTCCCA+AGG | + | chr7_2:84445093-84445112 | None:intergenic | 35.0% | |
| CTATGTCTGATGTCCTAATT+AGG | - | chr7_2:84445171-84445190 | Msa1084160:intron | 35.0% | |
| ! | CTGTGGCTTTACATATATTG+GGG | + | chr7_2:84445332-84445351 | None:intergenic | 35.0% |
| TGCCAACCATTACATTAAGA+CGG | + | chr7_2:84445378-84445397 | None:intergenic | 35.0% | |
| AAGCTGAAACTGAACGTTAA+CGG | + | chr7_2:84445431-84445450 | None:intergenic | 35.0% | |
| TCTGATAGATCACGATGTAA+AGG | + | chr7_2:84445638-84445657 | None:intergenic | 35.0% | |
| ACTAATGTTCCAGACATTGA+GGG | + | chr7_2:84445702-84445721 | None:intergenic | 35.0% | |
| CCTAAAATCCACTTGAAATG+TGG | + | chr7_2:84445760-84445779 | None:intergenic | 35.0% | |
| !! | CCACATTTCAAGTGGATTTT+AGG | - | chr7_2:84445757-84445776 | Msa1084160:intron | 35.0% |
| !!! | TCAAGTGGATTTTAGGATCA+TGG | - | chr7_2:84445764-84445783 | Msa1084160:intron | 35.0% |
| !!! | CAAGTGGATTTTAGGATCAT+GGG | - | chr7_2:84445765-84445784 | Msa1084160:intron | 35.0% |
| AAACCTTTGTAGAAACGGTA+GGG | + | chr7_2:84445840-84445859 | None:intergenic | 35.0% | |
| AAAACCTTTGTAGAAACGGT+AGG | + | chr7_2:84445841-84445860 | None:intergenic | 35.0% | |
| CTCGAAAACCTTTGTAGAAA+CGG | + | chr7_2:84445845-84445864 | None:intergenic | 35.0% | |
| ATAGCAGGACTAACATAGGT+AGG | + | chr7_2:84444197-84444216 | None:intergenic | 40.0% | |
| ATGCATAGCAGGACTAACAT+AGG | + | chr7_2:84444201-84444220 | None:intergenic | 40.0% | |
| ATCTCCTTATATCCGAGCTT+GGG | + | chr7_2:84444231-84444250 | None:intergenic | 40.0% | |
| TATCTCCTTATATCCGAGCT+TGG | + | chr7_2:84444232-84444251 | None:intergenic | 40.0% | |
| CGTATTTGATTCATGCCGTA+AGG | + | chr7_2:84444298-84444317 | None:intergenic | 40.0% | |
| ! | AAGCTTTATCCCACTGAGTA+GGG | + | chr7_2:84444331-84444350 | None:intergenic | 40.0% |
| ! | AAAGCTTTATCCCACTGAGT+AGG | + | chr7_2:84444332-84444351 | None:intergenic | 40.0% |
| TTGGTTACTGTATAACCTGC+TGG | - | chr7_2:84444395-84444414 | Msa1084160:CDS | 40.0% | |
| TGAATGATTTCAGCTGGCTA+CGG | + | chr7_2:84444538-84444557 | None:intergenic | 40.0% | |
| AGATGTACCAACCAAAGAGT+AGG | - | chr7_2:84444602-84444621 | Msa1084160:intron | 40.0% | |
| GATGTACCAACCAAAGAGTA+GGG | - | chr7_2:84444603-84444622 | Msa1084160:intron | 40.0% | |
| ATGTACCAACCAAAGAGTAG+GGG | - | chr7_2:84444604-84444623 | Msa1084160:intron | 40.0% | |
| TTAGTTATCCCCCTACTCTT+TGG | + | chr7_2:84444616-84444635 | None:intergenic | 40.0% | |
| CTGTTCAGTAAGTCAGCAAA+AGG | + | chr7_2:84444765-84444784 | None:intergenic | 40.0% | |
| !!! | CTTTTGCTGACTTACTGAAC+AGG | - | chr7_2:84444763-84444782 | Msa1084160:CDS | 40.0% |
| CTGGTGAAGTGTGAGATTAA+TGG | - | chr7_2:84444958-84444977 | Msa1084160:intron | 40.0% | |
| GAAGTGTGAGATTAATGGTG+AGG | - | chr7_2:84444963-84444982 | Msa1084160:intron | 40.0% | |
| CAAGTAAATTCCCACATCAC+TGG | - | chr7_2:84444988-84445007 | Msa1084160:intron | 40.0% | |
| CTCACATCATCAAGGATTGA+AGG | + | chr7_2:84445045-84445064 | None:intergenic | 40.0% | |
| !! | CTTCAATCCTTGATGATGTG+AGG | - | chr7_2:84445043-84445062 | Msa1084160:intron | 40.0% |
| TCCACCCTTGTGTTAGATTT+CGG | - | chr7_2:84445067-84445086 | Msa1084160:intron | 40.0% | |
| AAGGCCGAAATCTAACACAA+GGG | + | chr7_2:84445074-84445093 | None:intergenic | 40.0% | |
| TTGTGTTAGATTTCGGCCTT+GGG | - | chr7_2:84445074-84445093 | Msa1084160:intron | 40.0% | |
| AGCTTAAATTGTCCATCAGG+AGG | + | chr7_2:84445126-84445145 | None:intergenic | 40.0% | |
| ATTAGGACATCAGACATAGC+TGG | + | chr7_2:84445170-84445189 | None:intergenic | 40.0% | |
| GACATGCCGTCTTAATGTAA+TGG | - | chr7_2:84445369-84445388 | Msa1084160:intron | 40.0% | |
| TGCCGTCTTAATGTAATGGT+TGG | - | chr7_2:84445373-84445392 | Msa1084160:intron | 40.0% | |
| AGATCAGCTGATAAGATGCA+AGG | + | chr7_2:84445457-84445476 | None:intergenic | 40.0% | |
| TGATCTATCAGACATGCACT+TGG | - | chr7_2:84445646-84445665 | Msa1084160:intron | 40.0% | |
| TAATGTTCCAGACATTGAGG+GGG | + | chr7_2:84445700-84445719 | None:intergenic | 40.0% | |
| CTAATGTTCCAGACATTGAG+GGG | + | chr7_2:84445701-84445720 | None:intergenic | 40.0% | |
| CACTAATGTTCCAGACATTG+AGG | + | chr7_2:84445703-84445722 | None:intergenic | 40.0% | |
| ATTAGTGCTTGAGACTGGAA+TGG | - | chr7_2:84445716-84445735 | Msa1084160:intron | 40.0% | |
| TGTCTTTCCCACATTTCAAG+TGG | - | chr7_2:84445749-84445768 | Msa1084160:intron | 40.0% | |
| TGGTCTGCAAATAGACAAAC+TGG | - | chr7_2:84445800-84445819 | Msa1084160:intron | 40.0% | |
| TGACTTCAAATTCACCTGCT+CGG | + | chr7_2:84445875-84445894 | None:intergenic | 40.0% | |
| ! | GAGATTTGGTTGCATGTACA+TGG | - | chr7_2:84445951-84445970 | Msa1084160:CDS | 40.0% |
| ATAGCAGGACTAACATAGGT+AGG | + | chr7_2:84444197-84444216 | None:intergenic | 40.0% | |
| ATGCATAGCAGGACTAACAT+AGG | + | chr7_2:84444201-84444220 | None:intergenic | 40.0% | |
| ATCTCCTTATATCCGAGCTT+GGG | + | chr7_2:84444231-84444250 | None:intergenic | 40.0% | |
| TATCTCCTTATATCCGAGCT+TGG | + | chr7_2:84444232-84444251 | None:intergenic | 40.0% | |
| CGTATTTGATTCATGCCGTA+AGG | + | chr7_2:84444298-84444317 | None:intergenic | 40.0% | |
| ! | AAGCTTTATCCCACTGAGTA+GGG | + | chr7_2:84444331-84444350 | None:intergenic | 40.0% |
| ! | AAAGCTTTATCCCACTGAGT+AGG | + | chr7_2:84444332-84444351 | None:intergenic | 40.0% |
| TTGGTTACTGTATAACCTGC+TGG | - | chr7_2:84444395-84444414 | Msa1084160:CDS | 40.0% | |
| TGAATGATTTCAGCTGGCTA+CGG | + | chr7_2:84444538-84444557 | None:intergenic | 40.0% | |
| AGATGTACCAACCAAAGAGT+AGG | - | chr7_2:84444602-84444621 | Msa1084160:intron | 40.0% | |
| GATGTACCAACCAAAGAGTA+GGG | - | chr7_2:84444603-84444622 | Msa1084160:intron | 40.0% | |
| ATGTACCAACCAAAGAGTAG+GGG | - | chr7_2:84444604-84444623 | Msa1084160:intron | 40.0% | |
| TTAGTTATCCCCCTACTCTT+TGG | + | chr7_2:84444616-84444635 | None:intergenic | 40.0% | |
| CTGTTCAGTAAGTCAGCAAA+AGG | + | chr7_2:84444765-84444784 | None:intergenic | 40.0% | |
| !!! | CTTTTGCTGACTTACTGAAC+AGG | - | chr7_2:84444763-84444782 | Msa1084160:CDS | 40.0% |
| CTGGTGAAGTGTGAGATTAA+TGG | - | chr7_2:84444958-84444977 | Msa1084160:intron | 40.0% | |
| GAAGTGTGAGATTAATGGTG+AGG | - | chr7_2:84444963-84444982 | Msa1084160:intron | 40.0% | |
| CAAGTAAATTCCCACATCAC+TGG | - | chr7_2:84444988-84445007 | Msa1084160:intron | 40.0% | |
| CTCACATCATCAAGGATTGA+AGG | + | chr7_2:84445045-84445064 | None:intergenic | 40.0% | |
| !! | CTTCAATCCTTGATGATGTG+AGG | - | chr7_2:84445043-84445062 | Msa1084160:intron | 40.0% |
| TCCACCCTTGTGTTAGATTT+CGG | - | chr7_2:84445067-84445086 | Msa1084160:intron | 40.0% | |
| AAGGCCGAAATCTAACACAA+GGG | + | chr7_2:84445074-84445093 | None:intergenic | 40.0% | |
| TTGTGTTAGATTTCGGCCTT+GGG | - | chr7_2:84445074-84445093 | Msa1084160:intron | 40.0% | |
| AGCTTAAATTGTCCATCAGG+AGG | + | chr7_2:84445126-84445145 | None:intergenic | 40.0% | |
| ATTAGGACATCAGACATAGC+TGG | + | chr7_2:84445170-84445189 | None:intergenic | 40.0% | |
| GACATGCCGTCTTAATGTAA+TGG | - | chr7_2:84445369-84445388 | Msa1084160:intron | 40.0% | |
| TGCCGTCTTAATGTAATGGT+TGG | - | chr7_2:84445373-84445392 | Msa1084160:intron | 40.0% | |
| AGATCAGCTGATAAGATGCA+AGG | + | chr7_2:84445457-84445476 | None:intergenic | 40.0% | |
| TGATCTATCAGACATGCACT+TGG | - | chr7_2:84445646-84445665 | Msa1084160:intron | 40.0% | |
| TAATGTTCCAGACATTGAGG+GGG | + | chr7_2:84445700-84445719 | None:intergenic | 40.0% | |
| CTAATGTTCCAGACATTGAG+GGG | + | chr7_2:84445701-84445720 | None:intergenic | 40.0% | |
| CACTAATGTTCCAGACATTG+AGG | + | chr7_2:84445703-84445722 | None:intergenic | 40.0% | |
| ATTAGTGCTTGAGACTGGAA+TGG | - | chr7_2:84445716-84445735 | Msa1084160:intron | 40.0% | |
| TGTCTTTCCCACATTTCAAG+TGG | - | chr7_2:84445749-84445768 | Msa1084160:intron | 40.0% | |
| TGGTCTGCAAATAGACAAAC+TGG | - | chr7_2:84445800-84445819 | Msa1084160:intron | 40.0% | |
| TGACTTCAAATTCACCTGCT+CGG | + | chr7_2:84445875-84445894 | None:intergenic | 40.0% | |
| ! | GAGATTTGGTTGCATGTACA+TGG | - | chr7_2:84445951-84445970 | Msa1084160:CDS | 40.0% |
| ! | AAAGTCTTGAGCGTTGTGAC+TGG | - | chr7_2:84443825-84443844 | Msa1084160:three_prime_UTR | 45.0% |
| ! | TCGACTTCGGTTCCTTTTCA+AGG | - | chr7_2:84444155-84444174 | Msa1084160:CDS | 45.0% |
| !! | ACTTCGGTTCCTTTTCAAGG+AGG | - | chr7_2:84444158-84444177 | Msa1084160:CDS | 45.0% |
| TTAGTCCTGCTATGCATAGC+AGG | - | chr7_2:84444204-84444223 | Msa1084160:intron | 45.0% | |
| TTTATCCCACTGAGTAGGGT+CGG | + | chr7_2:84444327-84444346 | None:intergenic | 45.0% | |
| ! | AGAGGTGCAAAAATACCAGC+AGG | + | chr7_2:84444413-84444432 | None:intergenic | 45.0% |
| TTTGCACCTCTAATCTGGGT+TGG | - | chr7_2:84444422-84444441 | Msa1084160:CDS | 45.0% | |
| TTAGTGCCAACCCAGATTAG+AGG | + | chr7_2:84444431-84444450 | None:intergenic | 45.0% | |
| ATAAATGGCAAGGTACGCAG+CGG | - | chr7_2:84444579-84444598 | Msa1084160:intron | 45.0% | |
| TGTACCAACCAAAGAGTAGG+GGG | - | chr7_2:84444605-84444624 | Msa1084160:intron | 45.0% | |
| TTATCCCCCTACTCTTTGGT+TGG | + | chr7_2:84444612-84444631 | None:intergenic | 45.0% | |
| TTCATTCAGGGATGGTACTC+TGG | - | chr7_2:84444939-84444958 | Msa1084160:intron | 45.0% | |
| ATCAGGTAGACCAGTGATGT+GGG | + | chr7_2:84445001-84445020 | None:intergenic | 45.0% | |
| AATCAGGTAGACCAGTGATG+TGG | + | chr7_2:84445002-84445021 | None:intergenic | 45.0% | |
| CAAGGCCGAAATCTAACACA+AGG | + | chr7_2:84445075-84445094 | None:intergenic | 45.0% | |
| CTTGTGTTAGATTTCGGCCT+TGG | - | chr7_2:84445073-84445092 | Msa1084160:intron | 45.0% | |
| CTTTCATTTGTGCCTCCTGA+TGG | - | chr7_2:84445111-84445130 | Msa1084160:intron | 45.0% | |
| ! | AAGCCACAGTTGACTTCAGA+TGG | - | chr7_2:84445343-84445362 | Msa1084160:intron | 45.0% |
| ! | CACAGTTGACTTCAGATGGT+GGG | - | chr7_2:84445347-84445366 | Msa1084160:intron | 45.0% |
| GTTGGCATGAGAAATGATCC+TGG | - | chr7_2:84445391-84445410 | Msa1084160:intron | 45.0% | |
| ACGGAATCAACTGTCTTTCC+AGG | + | chr7_2:84445412-84445431 | None:intergenic | 45.0% | |
| TCAGCTGATAAGATGCAAGG+AGG | + | chr7_2:84445454-84445473 | None:intergenic | 45.0% | |
| GCTGATCTGACTTCAACTCA+TGG | - | chr7_2:84445469-84445488 | Msa1084160:intron | 45.0% | |
| ! | TTGAGGGGGCTTTATCCTTT+GGG | + | chr7_2:84445686-84445705 | None:intergenic | 45.0% |
| ! | ATTGAGGGGGCTTTATCCTT+TGG | + | chr7_2:84445687-84445706 | None:intergenic | 45.0% |
| GGAACATTAGTGCTTGAGAC+TGG | - | chr7_2:84445711-84445730 | Msa1084160:intron | 45.0% | |
| GTACCCTACCGTTTCTACAA+AGG | - | chr7_2:84445834-84445853 | Msa1084160:intron | 45.0% | |
| GACTTCAAATTCACCTGCTC+GGG | + | chr7_2:84445874-84445893 | None:intergenic | 45.0% | |
| ! | GAGCAGGTGAATTTGAAGTC+AGG | - | chr7_2:84445874-84445893 | Msa1084160:intron | 45.0% |
| TTTGGTTGCATGTACATGGC+TGG | - | chr7_2:84445955-84445974 | Msa1084160:CDS | 45.0% | |
| ! | AAAGTCTTGAGCGTTGTGAC+TGG | - | chr7_2:84443825-84443844 | Msa1084160:three_prime_UTR | 45.0% |
| ! | TCGACTTCGGTTCCTTTTCA+AGG | - | chr7_2:84444155-84444174 | Msa1084160:CDS | 45.0% |
| !! | ACTTCGGTTCCTTTTCAAGG+AGG | - | chr7_2:84444158-84444177 | Msa1084160:CDS | 45.0% |
| TTAGTCCTGCTATGCATAGC+AGG | - | chr7_2:84444204-84444223 | Msa1084160:intron | 45.0% | |
| TTTATCCCACTGAGTAGGGT+CGG | + | chr7_2:84444327-84444346 | None:intergenic | 45.0% | |
| ! | AGAGGTGCAAAAATACCAGC+AGG | + | chr7_2:84444413-84444432 | None:intergenic | 45.0% |
| TTTGCACCTCTAATCTGGGT+TGG | - | chr7_2:84444422-84444441 | Msa1084160:CDS | 45.0% | |
| TTAGTGCCAACCCAGATTAG+AGG | + | chr7_2:84444431-84444450 | None:intergenic | 45.0% | |
| ATAAATGGCAAGGTACGCAG+CGG | - | chr7_2:84444579-84444598 | Msa1084160:intron | 45.0% | |
| TGTACCAACCAAAGAGTAGG+GGG | - | chr7_2:84444605-84444624 | Msa1084160:intron | 45.0% | |
| TTATCCCCCTACTCTTTGGT+TGG | + | chr7_2:84444612-84444631 | None:intergenic | 45.0% | |
| TTCATTCAGGGATGGTACTC+TGG | - | chr7_2:84444939-84444958 | Msa1084160:intron | 45.0% | |
| ATCAGGTAGACCAGTGATGT+GGG | + | chr7_2:84445001-84445020 | None:intergenic | 45.0% | |
| AATCAGGTAGACCAGTGATG+TGG | + | chr7_2:84445002-84445021 | None:intergenic | 45.0% | |
| CAAGGCCGAAATCTAACACA+AGG | + | chr7_2:84445075-84445094 | None:intergenic | 45.0% | |
| CTTGTGTTAGATTTCGGCCT+TGG | - | chr7_2:84445073-84445092 | Msa1084160:intron | 45.0% | |
| CTTTCATTTGTGCCTCCTGA+TGG | - | chr7_2:84445111-84445130 | Msa1084160:intron | 45.0% | |
| ! | AAGCCACAGTTGACTTCAGA+TGG | - | chr7_2:84445343-84445362 | Msa1084160:intron | 45.0% |
| ! | CACAGTTGACTTCAGATGGT+GGG | - | chr7_2:84445347-84445366 | Msa1084160:intron | 45.0% |
| GTTGGCATGAGAAATGATCC+TGG | - | chr7_2:84445391-84445410 | Msa1084160:intron | 45.0% | |
| ACGGAATCAACTGTCTTTCC+AGG | + | chr7_2:84445412-84445431 | None:intergenic | 45.0% | |
| TCAGCTGATAAGATGCAAGG+AGG | + | chr7_2:84445454-84445473 | None:intergenic | 45.0% | |
| GCTGATCTGACTTCAACTCA+TGG | - | chr7_2:84445469-84445488 | Msa1084160:intron | 45.0% | |
| ! | TTGAGGGGGCTTTATCCTTT+GGG | + | chr7_2:84445686-84445705 | None:intergenic | 45.0% |
| ! | ATTGAGGGGGCTTTATCCTT+TGG | + | chr7_2:84445687-84445706 | None:intergenic | 45.0% |
| GGAACATTAGTGCTTGAGAC+TGG | - | chr7_2:84445711-84445730 | Msa1084160:intron | 45.0% | |
| GTACCCTACCGTTTCTACAA+AGG | - | chr7_2:84445834-84445853 | Msa1084160:intron | 45.0% | |
| GACTTCAAATTCACCTGCTC+GGG | + | chr7_2:84445874-84445893 | None:intergenic | 45.0% | |
| ! | GAGCAGGTGAATTTGAAGTC+AGG | - | chr7_2:84445874-84445893 | Msa1084160:intron | 45.0% |
| TTTGGTTGCATGTACATGGC+TGG | - | chr7_2:84445955-84445974 | Msa1084160:CDS | 45.0% | |
| !!! | ATTCATTTATTTTTAAATTA+TGG | - | chr7_2:84444040-84444059 | Msa1084160:CDS | 5.0% |
| !!! | TTTTAAGAAAATAAAAATTT+GGG | + | chr7_2:84445262-84445281 | None:intergenic | 5.0% |
| !!! | ATTTTAAGAAAATAAAAATT+TGG | + | chr7_2:84445263-84445282 | None:intergenic | 5.0% |
| !!! | ATTCATTTATTTTTAAATTA+TGG | - | chr7_2:84444040-84444059 | Msa1084160:CDS | 5.0% |
| !!! | TTTTAAGAAAATAAAAATTT+GGG | + | chr7_2:84445262-84445281 | None:intergenic | 5.0% |
| !!! | ATTTTAAGAAAATAAAAATT+TGG | + | chr7_2:84445263-84445282 | None:intergenic | 5.0% |
| ACACAAGATGCTGTACTGCC+TGG | + | chr7_2:84443879-84443898 | None:intergenic | 50.0% | |
| GTACAGCATCTTGTGTTCCC+TGG | - | chr7_2:84443883-84443902 | Msa1084160:three_prime_UTR | 50.0% | |
| AGGTCCCAAGCTCGGATATA+AGG | - | chr7_2:84444224-84444243 | Msa1084160:intron | 50.0% | |
| TAATAGCCGACCCTACTCAG+TGG | - | chr7_2:84444318-84444337 | Msa1084160:intron | 50.0% | |
| AATAGCCGACCCTACTCAGT+GGG | - | chr7_2:84444319-84444338 | Msa1084160:intron | 50.0% | |
| GGTGGAACCTCACATCATCA+AGG | + | chr7_2:84445053-84445072 | None:intergenic | 50.0% | |
| GCCGAAATCTAACACAAGGG+TGG | + | chr7_2:84445071-84445090 | None:intergenic | 50.0% | |
| ! | CCACCATCTGAAGTCAACTG+TGG | + | chr7_2:84445349-84445368 | None:intergenic | 50.0% |
| ! | CCACAGTTGACTTCAGATGG+TGG | - | chr7_2:84445346-84445365 | Msa1084160:intron | 50.0% |
| CAGACATGCACTTGGTCCAT+TGG | - | chr7_2:84445654-84445673 | Msa1084160:intron | 50.0% | |
| !! | GGGCTTTATCCTTTGGGATC+CGG | + | chr7_2:84445680-84445699 | None:intergenic | 50.0% |
| GATAAAGCCCCCTCAATGTC+TGG | - | chr7_2:84445690-84445709 | Msa1084160:intron | 50.0% | |
| ACACAAGATGCTGTACTGCC+TGG | + | chr7_2:84443879-84443898 | None:intergenic | 50.0% | |
| GTACAGCATCTTGTGTTCCC+TGG | - | chr7_2:84443883-84443902 | Msa1084160:three_prime_UTR | 50.0% | |
| AGGTCCCAAGCTCGGATATA+AGG | - | chr7_2:84444224-84444243 | Msa1084160:intron | 50.0% | |
| TAATAGCCGACCCTACTCAG+TGG | - | chr7_2:84444318-84444337 | Msa1084160:intron | 50.0% | |
| AATAGCCGACCCTACTCAGT+GGG | - | chr7_2:84444319-84444338 | Msa1084160:intron | 50.0% | |
| GGTGGAACCTCACATCATCA+AGG | + | chr7_2:84445053-84445072 | None:intergenic | 50.0% | |
| GCCGAAATCTAACACAAGGG+TGG | + | chr7_2:84445071-84445090 | None:intergenic | 50.0% | |
| ! | CCACCATCTGAAGTCAACTG+TGG | + | chr7_2:84445349-84445368 | None:intergenic | 50.0% |
| ! | CCACAGTTGACTTCAGATGG+TGG | - | chr7_2:84445346-84445365 | Msa1084160:intron | 50.0% |
| CAGACATGCACTTGGTCCAT+TGG | - | chr7_2:84445654-84445673 | Msa1084160:intron | 50.0% | |
| !! | GGGCTTTATCCTTTGGGATC+CGG | + | chr7_2:84445680-84445699 | None:intergenic | 50.0% |
| GATAAAGCCCCCTCAATGTC+TGG | - | chr7_2:84445690-84445709 | Msa1084160:intron | 50.0% | |
| GCGGAGCTATCATCTCTTGC+AGG | + | chr7_2:84443791-84443810 | None:intergenic | 55.0% | |
| AATGTGAGCGACACGCTTCC+AGG | - | chr7_2:84443858-84443877 | Msa1084160:three_prime_UTR | 55.0% | |
| TTAGGGTCGGCTGTTCTCCA+GGG | + | chr7_2:84443903-84443922 | None:intergenic | 55.0% | |
| TGGGACCTGCTATGCATAGC+AGG | + | chr7_2:84444212-84444231 | None:intergenic | 55.0% | |
| TGCATAGCAGGTCCCAAGCT+CGG | - | chr7_2:84444216-84444235 | Msa1084160:intron | 55.0% | |
| CATGCACTTGGTCCATTGGC+CGG | - | chr7_2:84445658-84445677 | Msa1084160:intron | 55.0% | |
| !! | ATCCTTTGGGATCCGGCCAA+TGG | + | chr7_2:84445673-84445692 | None:intergenic | 55.0% |
| !! | ATCATGGGTGTCGCTCTCTC+TGG | - | chr7_2:84445780-84445799 | Msa1084160:intron | 55.0% |
| TTTCGAGCTCTTACCCGAGC+AGG | - | chr7_2:84445858-84445877 | Msa1084160:intron | 55.0% | |
| GCGGAGCTATCATCTCTTGC+AGG | + | chr7_2:84443791-84443810 | None:intergenic | 55.0% | |
| AATGTGAGCGACACGCTTCC+AGG | - | chr7_2:84443858-84443877 | Msa1084160:three_prime_UTR | 55.0% | |
| TTAGGGTCGGCTGTTCTCCA+GGG | + | chr7_2:84443903-84443922 | None:intergenic | 55.0% | |
| TGGGACCTGCTATGCATAGC+AGG | + | chr7_2:84444212-84444231 | None:intergenic | 55.0% | |
| TGCATAGCAGGTCCCAAGCT+CGG | - | chr7_2:84444216-84444235 | Msa1084160:intron | 55.0% | |
| CATGCACTTGGTCCATTGGC+CGG | - | chr7_2:84445658-84445677 | Msa1084160:intron | 55.0% | |
| !! | ATCCTTTGGGATCCGGCCAA+TGG | + | chr7_2:84445673-84445692 | None:intergenic | 55.0% |
| !! | ATCATGGGTGTCGCTCTCTC+TGG | - | chr7_2:84445780-84445799 | Msa1084160:intron | 55.0% |
| TTTCGAGCTCTTACCCGAGC+AGG | - | chr7_2:84445858-84445877 | Msa1084160:intron | 55.0% | |
| CTTAGGGTCGGCTGTTCTCC+AGG | + | chr7_2:84443904-84443923 | None:intergenic | 60.0% | |
| GTCCATTGGCCGGATCCCAA+AGG | - | chr7_2:84445668-84445687 | Msa1084160:intron | 60.0% | |
| CTTAGGGTCGGCTGTTCTCC+AGG | + | chr7_2:84443904-84443923 | None:intergenic | 60.0% | |
| GTCCATTGGCCGGATCCCAA+AGG | - | chr7_2:84445668-84445687 | Msa1084160:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84443736 | 84446130 | 84443736 | ID=Msa1084160;Name=Msa1084160 |
| chr7_2 | mRNA | 84443736 | 84446130 | 84443736 | ID=Msa1084160-mRNA-1;Parent=Msa1084160;Name=Msa1084160-mRNA-1;_AED=0.02;_eAED=0.02;_QI=11|1|1|1|1|1|4|228|299 |
| chr7_2 | exon | 84443736 | 84444209 | 84443736 | ID=Msa1084160-mRNA-1:exon:22567;Parent=Msa1084160-mRNA-1 |
| chr7_2 | exon | 84444350 | 84444557 | 84444350 | ID=Msa1084160-mRNA-1:exon:22566;Parent=Msa1084160-mRNA-1 |
| chr7_2 | exon | 84444709 | 84444918 | 84444709 | ID=Msa1084160-mRNA-1:exon:22565;Parent=Msa1084160-mRNA-1 |
| chr7_2 | exon | 84445884 | 84446130 | 84445884 | ID=Msa1084160-mRNA-1:exon:22564;Parent=Msa1084160-mRNA-1 |
| chr7_2 | five_prime_UTR | 84446120 | 84446130 | 84446120 | ID=Msa1084160-mRNA-1:five_prime_utr;Parent=Msa1084160-mRNA-1 |
| chr7_2 | CDS | 84445884 | 84446119 | 84445884 | ID=Msa1084160-mRNA-1:cds;Parent=Msa1084160-mRNA-1 |
| chr7_2 | CDS | 84444709 | 84444918 | 84444709 | ID=Msa1084160-mRNA-1:cds;Parent=Msa1084160-mRNA-1 |
| chr7_2 | CDS | 84444350 | 84444557 | 84444350 | ID=Msa1084160-mRNA-1:cds;Parent=Msa1084160-mRNA-1 |
| chr7_2 | CDS | 84443964 | 84444209 | 84443964 | ID=Msa1084160-mRNA-1:cds;Parent=Msa1084160-mRNA-1 |
| chr7_2 | three_prime_UTR | 84443736 | 84443963 | 84443736 | ID=Msa1084160-mRNA-1:three_prime_utr;Parent=Msa1084160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
