Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404700 | XP_013459310.1 | 98.762 | 323 | 4 | 0 | 1 | 323 | 1 | 323 | 0.0 | 659 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404700 | sp|O48946|CESA1_ARATH | 59.259 | 189 | 70 | 5 | 3 | 190 | 6 | 188 | 2.40e-55 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404700 | A0A072UVE3 | 98.762 | 323 | 4 | 0 | 1 | 323 | 1 | 323 | 0.0 | 659 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0404700 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0404700 | -0.861058 | 1.339753e-63 | -8.615850e-47 |
| Msa0000590 | Msa0404700 | 0.819667 | 1.029956e-52 | -8.615850e-47 |
| Msa0036370 | Msa0404700 | 0.819819 | 9.506173e-53 | -8.615850e-47 |
| Msa0038020 | Msa0404700 | 0.823317 | 1.478159e-53 | -8.615850e-47 |
| Msa0043730 | Msa0404700 | 0.803207 | 3.891298e-49 | -8.615850e-47 |
| Msa0072170 | Msa0404700 | 0.821873 | 3.203744e-53 | -8.615850e-47 |
| Msa0085720 | Msa0404700 | 0.839869 | 1.224310e-57 | -8.615850e-47 |
| Msa0090030 | Msa0404700 | 0.835081 | 2.064834e-56 | -8.615850e-47 |
| Msa0092440 | Msa0404700 | 0.806503 | 7.971293e-50 | -8.615850e-47 |
| Msa0099510 | Msa0404700 | 0.810883 | 9.234045e-51 | -8.615850e-47 |
| Msa0120370 | Msa0404700 | -0.815184 | 1.053055e-51 | -8.615850e-47 |
| Msa0120540 | Msa0404700 | 0.822590 | 2.183948e-53 | -8.615850e-47 |
| Msa0140170 | Msa0404700 | 0.829497 | 4.979500e-55 | -8.615850e-47 |
| Msa0140400 | Msa0404700 | 0.808524 | 2.969523e-50 | -8.615850e-47 |
| Msa0163560 | Msa0404700 | 0.824220 | 9.080493e-54 | -8.615850e-47 |
| Msa0165970 | Msa0404700 | 0.801292 | 9.644160e-49 | -8.615850e-47 |
| Msa0173330 | Msa0404700 | 0.848827 | 4.782831e-60 | -8.615850e-47 |
| Msa0175050 | Msa0404700 | 0.817162 | 3.804948e-52 | -8.615850e-47 |
| Msa0179000 | Msa0404700 | 0.802871 | 4.566932e-49 | -8.615850e-47 |
| Msa0194720 | Msa0404700 | 0.831257 | 1.849028e-55 | -8.615850e-47 |
| Msa0198940 | Msa0404700 | 0.848495 | 5.910319e-60 | -8.615850e-47 |
| Msa0208810 | Msa0404700 | 0.838708 | 2.449573e-57 | -8.615850e-47 |
| Msa0210250 | Msa0404700 | 0.800982 | 1.116248e-48 | -8.615850e-47 |
| Msa0212750 | Msa0404700 | -0.815058 | 1.123099e-51 | -8.615850e-47 |
| Msa0223100 | Msa0404700 | 0.844734 | 6.294227e-59 | -8.615850e-47 |
| Msa0223290 | Msa0404700 | 0.851465 | 8.717465e-61 | -8.615850e-47 |
| Msa0223380 | Msa0404700 | 0.834466 | 2.949254e-56 | -8.615850e-47 |
| Msa0228220 | Msa0404700 | 0.808679 | 2.750928e-50 | -8.615850e-47 |
| Msa0370310 | Msa0404700 | 0.846426 | 2.188380e-59 | -8.615850e-47 |
| Msa0370870 | Msa0404700 | 0.883366 | 4.769634e-71 | -8.615850e-47 |
| Msa0377530 | Msa0404700 | 0.853205 | 2.786269e-61 | -8.615850e-47 |
| Msa0381220 | Msa0404700 | 0.802189 | 6.312858e-49 | -8.615850e-47 |
| Msa0387910 | Msa0404700 | 0.824468 | 7.942817e-54 | -8.615850e-47 |
| Msa0388030 | Msa0404700 | -0.849149 | 3.892556e-60 | -8.615850e-47 |
| Msa0389810 | Msa0404700 | 0.801034 | 1.089027e-48 | -8.615850e-47 |
| Msa0404220 | Msa0404700 | 0.809295 | 2.030714e-50 | -8.615850e-47 |
| Msa0404700 | Msa0416320 | 0.866655 | 2.432253e-65 | -8.615850e-47 |
| Msa0404700 | Msa0417650 | 0.804704 | 1.901223e-49 | -8.615850e-47 |
| Msa0404700 | Msa0419050 | 0.817823 | 2.700113e-52 | -8.615850e-47 |
| Msa0404700 | Msa0419640 | -0.804965 | 1.676825e-49 | -8.615850e-47 |
| Msa0404700 | Msa0421260 | 0.807331 | 5.326163e-50 | -8.615850e-47 |
| Msa0404700 | Msa0426810 | 0.868588 | 5.840974e-66 | -8.615850e-47 |
| Msa0404700 | Msa0436190 | 0.813627 | 2.326109e-51 | -8.615850e-47 |
| Msa0404700 | Msa0442250 | 0.809977 | 1.448838e-50 | -8.615850e-47 |
| Msa0404700 | Msa0462540 | 0.954054 | 7.003653e-112 | -8.615850e-47 |
| Msa0404700 | Msa0464420 | 0.808028 | 3.786908e-50 | -8.615850e-47 |
| Msa0404700 | Msa0464900 | 0.867414 | 1.392916e-65 | -8.615850e-47 |
| Msa0404700 | Msa0465920 | 0.818909 | 1.532670e-52 | -8.615850e-47 |
| Msa0404700 | Msa0468130 | 0.819326 | 1.231627e-52 | -8.615850e-47 |
| Msa0404700 | Msa0471790 | 0.808266 | 3.370680e-50 | -8.615850e-47 |
| Msa0404700 | Msa0489610 | 0.818912 | 1.530447e-52 | -8.615850e-47 |
| Msa0404700 | Msa0491520 | 0.805121 | 1.555554e-49 | -8.615850e-47 |
| Msa0404700 | Msa0493920 | 0.816552 | 5.213347e-52 | -8.615850e-47 |
| Msa0404700 | Msa0505060 | 0.844132 | 9.135723e-59 | -8.615850e-47 |
| Msa0404700 | Msa0510040 | 0.804751 | 1.858424e-49 | -8.615850e-47 |
| Msa0404700 | Msa0510560 | 0.827615 | 1.418638e-54 | -8.615850e-47 |
| Msa0404700 | Msa0517490 | 0.848036 | 7.915815e-60 | -8.615850e-47 |
| Msa0404700 | Msa0519390 | 0.821143 | 4.721548e-53 | -8.615850e-47 |
| Msa0404700 | Msa0524600 | 0.813173 | 2.925968e-51 | -8.615850e-47 |
| Msa0404700 | Msa0530380 | 0.803336 | 3.659714e-49 | -8.615850e-47 |
| Msa0404700 | Msa0534410 | 0.800043 | 1.734246e-48 | -8.615850e-47 |
| Msa0404700 | Msa0537770 | 0.814115 | 1.815453e-51 | -8.615850e-47 |
| Msa0404700 | Msa0547400 | 0.823153 | 1.614344e-53 | -8.615850e-47 |
| Msa0404700 | Msa0557950 | -0.817073 | 3.983118e-52 | -8.615850e-47 |
| Msa0404700 | Msa0565620 | -0.820796 | 5.674874e-53 | -8.615850e-47 |
| Msa0404700 | Msa0578090 | 0.821192 | 4.600897e-53 | -8.615850e-47 |
| Msa0404700 | Msa0579370 | 0.811722 | 6.074682e-51 | -8.615850e-47 |
| Msa0404700 | Msa0581920 | 0.801492 | 8.777312e-49 | -8.615850e-47 |
| Msa0404700 | Msa0586850 | 0.804619 | 1.980780e-49 | -8.615850e-47 |
| Msa0404700 | Msa0587190 | 0.803723 | 3.041943e-49 | -8.615850e-47 |
| Msa0404700 | Msa0590650 | 0.801753 | 7.761186e-49 | -8.615850e-47 |
| Msa0404700 | Msa0598560 | 0.810854 | 9.368740e-51 | -8.615850e-47 |
| Msa0404700 | Msa0602120 | 0.820997 | 5.103522e-53 | -8.615850e-47 |
| Msa0404700 | Msa0609970 | 0.856359 | 3.393310e-62 | -8.615850e-47 |
| Msa0404700 | Msa0614990 | 0.840964 | 6.330232e-58 | -8.615850e-47 |
| Msa0404700 | Msa0618200 | -0.805026 | 1.628224e-49 | -8.615850e-47 |
| Msa0404700 | Msa0621240 | 0.801919 | 7.174135e-49 | -8.615850e-47 |
| Msa0404700 | Msa0622340 | 0.828147 | 1.056923e-54 | -8.615850e-47 |
| Msa0404700 | Msa0626680 | 0.809102 | 2.233141e-50 | -8.615850e-47 |
| Msa0404700 | Msa0643250 | 0.837876 | 4.013484e-57 | -8.615850e-47 |
| Msa0404700 | Msa0650620 | 0.838137 | 3.438832e-57 | -8.615850e-47 |
| Msa0404700 | Msa0650730 | 0.802663 | 5.041769e-49 | -8.615850e-47 |
| Msa0404700 | Msa0651150 | 0.803465 | 3.441511e-49 | -8.615850e-47 |
| Msa0404700 | Msa0653320 | -0.832660 | 8.328362e-56 | -8.615850e-47 |
| Msa0404700 | Msa0664760 | 0.816529 | 5.275791e-52 | -8.615850e-47 |
| Msa0404700 | Msa0669190 | 0.803950 | 2.728915e-49 | -8.615850e-47 |
| Msa0404700 | Msa0679550 | 0.824350 | 8.464708e-54 | -8.615850e-47 |
| Msa0404700 | Msa0682950 | 0.802267 | 6.082906e-49 | -8.615850e-47 |
| Msa0404700 | Msa0693790 | 0.830049 | 3.654875e-55 | -8.615850e-47 |
| Msa0404700 | Msa0696420 | 0.831025 | 2.108769e-55 | -8.615850e-47 |
| Msa0404700 | Msa0700230 | 0.811626 | 6.371694e-51 | -8.615850e-47 |
| Msa0404700 | Msa0715110 | 0.817695 | 2.885149e-52 | -8.615850e-47 |
| Msa0404700 | Msa0715150 | 0.808366 | 3.208711e-50 | -8.615850e-47 |
| Msa0404700 | Msa0724950 | 0.825878 | 3.685964e-54 | -8.615850e-47 |
| Msa0404700 | Msa0737800 | 0.838324 | 3.076601e-57 | -8.615850e-47 |
| Msa0404700 | Msa0744090 | 0.803861 | 2.848098e-49 | -8.615850e-47 |
| Msa0404700 | Msa0755080 | 0.816278 | 6.003783e-52 | -8.615850e-47 |
| Msa0404700 | Msa0761890 | 0.806221 | 9.139969e-50 | -8.615850e-47 |
| Msa0404700 | Msa0763080 | 0.803475 | 3.425001e-49 | -8.615850e-47 |
| Msa0404700 | Msa0784620 | 0.803970 | 2.703511e-49 | -8.615850e-47 |
| Msa0404700 | Msa0785430 | 0.807113 | 5.923418e-50 | -8.615850e-47 |
| Msa0404700 | Msa0799060 | 0.838115 | 3.482488e-57 | -8.615850e-47 |
| Msa0404700 | Msa0817260 | 0.839987 | 1.140101e-57 | -8.615850e-47 |
| Msa0404700 | Msa0817270 | 0.843263 | 1.560645e-58 | -8.615850e-47 |
| Msa0404700 | Msa0820530 | -0.830181 | 3.394345e-55 | -8.615850e-47 |
| Msa0404700 | Msa0824730 | 0.827656 | 1.386892e-54 | -8.615850e-47 |
| Msa0404700 | Msa0825280 | 0.806052 | 9.920207e-50 | -8.615850e-47 |
| Msa0404700 | Msa0834450 | 0.816068 | 6.691411e-52 | -8.615850e-47 |
| Msa0404700 | Msa0836620 | 0.806000 | 1.017176e-49 | -8.615850e-47 |
| Msa0404700 | Msa0845070 | 0.815432 | 9.271579e-52 | -8.615850e-47 |
| Msa0404700 | Msa0851470 | 0.802752 | 4.832827e-49 | -8.615850e-47 |
| Msa0404700 | Msa0876860 | -0.841142 | 5.685987e-58 | -8.615850e-47 |
| Msa0404700 | Msa0891600 | -0.802567 | 5.277138e-49 | -8.615850e-47 |
| Msa0404700 | Msa0895310 | 0.803305 | 3.714389e-49 | -8.615850e-47 |
| Msa0404700 | Msa0908170 | 0.839563 | 1.470023e-57 | -8.615850e-47 |
| Msa0404700 | Msa0944730 | 0.857469 | 1.597750e-62 | -8.615850e-47 |
| Msa0404700 | Msa0956520 | -0.813517 | 2.458864e-51 | -8.615850e-47 |
| Msa0404700 | Msa0959010 | 0.833331 | 5.670437e-56 | -8.615850e-47 |
| Msa0404700 | Msa0965020 | 0.800643 | 1.309280e-48 | -8.615850e-47 |
| Msa0404700 | Msa0982590 | 0.852699 | 3.888903e-61 | -8.615850e-47 |
| Msa0404700 | Msa0993530 | 0.806522 | 7.898474e-50 | -8.615850e-47 |
| Msa0404700 | Msa1021510 | 0.801718 | 7.888883e-49 | -8.615850e-47 |
| Msa0404700 | Msa1032640 | 0.812141 | 4.921283e-51 | -8.615850e-47 |
| Msa0404700 | Msa1037020 | 0.819201 | 1.314998e-52 | -8.615850e-47 |
| Msa0404700 | Msa1047720 | 0.800549 | 1.368066e-48 | -8.615850e-47 |
| Msa0404700 | Msa1048700 | 0.834101 | 3.641336e-56 | -8.615850e-47 |
| Msa0404700 | Msa1072530 | -0.819360 | 1.209977e-52 | -8.615850e-47 |
| Msa0404700 | Msa1077670 | 0.823343 | 1.457770e-53 | -8.615850e-47 |
| Msa0404700 | Msa1084160 | -0.800856 | 1.184371e-48 | -8.615850e-47 |
| Msa0404700 | Msa1087510 | -0.806140 | 9.505315e-50 | -8.615850e-47 |
| Msa0404700 | Msa1129400 | 0.820428 | 6.895533e-53 | -8.615850e-47 |
| Msa0404700 | Msa1130210 | -0.827499 | 1.512977e-54 | -8.615850e-47 |
| Msa0404700 | Msa1135880 | 0.805160 | 1.526376e-49 | -8.615850e-47 |
| Msa0404700 | Msa1162980 | 0.809501 | 1.834488e-50 | -8.615850e-47 |
| Msa0404700 | Msa1164530 | 0.829431 | 5.167168e-55 | -8.615850e-47 |
| Msa0404700 | Msa1174310 | 0.849326 | 3.473847e-60 | -8.615850e-47 |
| Msa0404700 | Msa1182630 | 0.843848 | 1.088703e-58 | -8.615850e-47 |
| Msa0404700 | Msa1182640 | 0.900345 | 8.038446e-78 | -8.615850e-47 |
| Msa0404700 | Msa1207460 | -0.812034 | 5.194659e-51 | -8.615850e-47 |
| Msa0404700 | Msa1211050 | -0.812211 | 4.752992e-51 | -8.615850e-47 |
| Msa0404700 | Msa1218650 | 0.831098 | 2.023451e-55 | -8.615850e-47 |
| Msa0404700 | Msa1229850 | 0.854631 | 1.082236e-61 | -8.615850e-47 |
| Msa0404700 | Msa1233950 | 0.812922 | 3.322598e-51 | -8.615850e-47 |
| Msa0404700 | Msa1235020 | 0.812480 | 4.150600e-51 | -8.615850e-47 |
| Msa0404700 | Msa1235400 | 0.825109 | 5.608112e-54 | -8.615850e-47 |
| Msa0404700 | Msa1236070 | -0.800576 | 1.350628e-48 | -8.615850e-47 |
| Msa0404700 | Msa1249920 | 0.812544 | 4.019367e-51 | -8.615850e-47 |
| Msa0404700 | Msa1272520 | 0.872522 | 2.981319e-67 | -8.615850e-47 |
| Msa0404700 | Msa1280620 | 0.817047 | 4.037163e-52 | -8.615850e-47 |
| Msa0404700 | Msa1291350 | 0.801658 | 8.117193e-49 | -8.615850e-47 |
| Msa0404700 | Msa1296300 | 0.820556 | 6.445571e-53 | -8.615850e-47 |
| Msa0404700 | Msa1300860 | 0.816964 | 4.215387e-52 | -8.615850e-47 |
| Msa0404700 | Msa1307740 | 0.813345 | 2.683340e-51 | -8.615850e-47 |
| Msa0404700 | Msa1310660 | 0.883267 | 5.182585e-71 | -8.615850e-47 |
| Msa0404700 | Msa1314770 | 0.846751 | 1.783593e-59 | -8.615850e-47 |
| Msa0404700 | Msa1338250 | 0.801095 | 1.058306e-48 | -8.615850e-47 |
| Msa0404700 | Msa1340830 | 0.823034 | 1.721316e-53 | -8.615850e-47 |
| Msa0404700 | Msa1350690 | 0.873722 | 1.179817e-67 | -8.615850e-47 |
| Msa0404700 | Msa1360280 | 0.866223 | 3.335762e-65 | -8.615850e-47 |
| Msa0404700 | Msa1363700 | 0.838159 | 3.394194e-57 | -8.615850e-47 |
| Msa0404700 | Msa1371090 | 0.806306 | 8.771731e-50 | -8.615850e-47 |
| Msa0404700 | Msa1383480 | 0.867677 | 1.147628e-65 | -8.615850e-47 |
| Msa0404700 | Msa1393800 | 0.811867 | 5.648229e-51 | -8.615850e-47 |
| Msa0404700 | Msa1398860 | 0.809206 | 2.122362e-50 | -8.615850e-47 |
| Msa0404700 | Msa1404720 | 0.812120 | 4.974482e-51 | -8.615850e-47 |
| Msa0404700 | Msa1415920 | 0.846216 | 2.496585e-59 | -8.615850e-47 |
| Msa0404700 | Msa1419110 | 0.820245 | 7.595992e-53 | -8.615850e-47 |
| Msa0404700 | Msa1422840 | 0.838467 | 2.826569e-57 | -8.615850e-47 |
| Msa0404700 | Msa1425340 | 0.803588 | 3.245545e-49 | -8.615850e-47 |
| Msa0404700 | Msa1439230 | 0.822602 | 2.169269e-53 | -8.615850e-47 |
| Msa0404700 | Msa1442220 | -0.825068 | 5.734382e-54 | -8.615850e-47 |
| Msa0404700 | Msa1452470 | 0.807152 | 5.811733e-50 | -8.615850e-47 |
| Msa0404700 | Msa1459760 | -0.802971 | 4.355780e-49 | -8.615850e-47 |
| Msa0239940 | Msa0404700 | 0.853417 | 2.422961e-61 | -8.615850e-47 |
| Msa0241740 | Msa0404700 | 0.858336 | 8.832445e-63 | -8.615850e-47 |
| Msa0250670 | Msa0404700 | 0.822337 | 2.499865e-53 | -8.615850e-47 |
| Msa0252240 | Msa0404700 | 0.818286 | 2.122161e-52 | -8.615850e-47 |
| Msa0266210 | Msa0404700 | 0.867171 | 1.665618e-65 | -8.615850e-47 |
| Msa0269520 | Msa0404700 | 0.810037 | 1.406323e-50 | -8.615850e-47 |
| Msa0275400 | Msa0404700 | -0.826958 | 2.038149e-54 | -8.615850e-47 |
| Msa0287670 | Msa0404700 | 0.873622 | 1.274570e-67 | -8.615850e-47 |
| Msa0288320 | Msa0404700 | 0.817985 | 2.482484e-52 | -8.615850e-47 |
| Msa0288730 | Msa0404700 | 0.836467 | 9.198944e-57 | -8.615850e-47 |
| Msa0289400 | Msa0404700 | 0.854126 | 1.514638e-61 | -8.615850e-47 |
| Msa0302650 | Msa0404700 | 0.859059 | 5.375189e-63 | -8.615850e-47 |
| Msa0308200 | Msa0404700 | 0.844884 | 5.732565e-59 | -8.615850e-47 |
| Msa0308220 | Msa0404700 | 0.843217 | 1.605324e-58 | -8.615850e-47 |
| Msa0312310 | Msa0404700 | 0.825127 | 5.552666e-54 | -8.615850e-47 |
| Msa0314120 | Msa0404700 | 0.809088 | 2.248639e-50 | -8.615850e-47 |
| Msa0320610 | Msa0404700 | 0.824434 | 8.090504e-54 | -8.615850e-47 |
| Msa0327410 | Msa0404700 | 0.810491 | 1.122783e-50 | -8.615850e-47 |
| Msa0328380 | Msa0404700 | 0.814786 | 1.290073e-51 | -8.615850e-47 |
| Msa0362060 | Msa0404700 | 0.877536 | 5.807416e-69 | -8.615850e-47 |
| Msa0363100 | Msa0404700 | 0.938779 | 3.821112e-99 | -8.615850e-47 |
| Msa0363170 | Msa0404700 | 0.986400 | 1.164232e-166 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404700 | MtrunA17_Chr3g0094861 | 98.762 | 323 | 4 | 0 | 1 | 323 | 1 | 323 | 0.0 | 659 |
| Msa0404700 | MtrunA17_Chr3g0137951 | 60.526 | 190 | 70 | 3 | 3 | 190 | 6 | 192 | 1.24e-58 | 203 |
| Msa0404700 | MtrunA17_Chr4g0073711 | 61.290 | 93 | 33 | 2 | 3 | 95 | 6 | 95 | 2.62e-31 | 124 |
| Msa0404700 | MtrunA17_Chr3g0088821 | 31.897 | 232 | 127 | 5 | 23 | 241 | 7 | 220 | 6.09e-31 | 123 |
| Msa0404700 | MtrunA17_Chr1g0201731 | 49.541 | 109 | 52 | 2 | 7 | 114 | 14 | 120 | 1.95e-29 | 119 |
| Msa0404700 | MtrunA17_Chr8g0352231 | 33.333 | 258 | 132 | 12 | 23 | 245 | 7 | 259 | 9.22e-29 | 116 |
| Msa0404700 | MtrunA17_Chr8g0383701 | 36.000 | 200 | 105 | 7 | 7 | 190 | 10 | 202 | 6.64e-27 | 111 |
| Msa0404700 | MtrunA17_Chr8g0364641 | 52.688 | 93 | 41 | 1 | 3 | 95 | 6 | 95 | 2.92e-25 | 106 |
| Msa0404700 | MtrunA17_Chr2g0296991 | 44.144 | 111 | 56 | 2 | 1 | 110 | 6 | 111 | 4.10e-25 | 106 |
| Msa0404700 | MtrunA17_Chr7g0236891 | 50.000 | 132 | 60 | 1 | 193 | 318 | 40 | 171 | 1.12e-23 | 95.5 |
| Msa0404700 | MtrunA17_Chr3g0078671 | 46.237 | 93 | 49 | 1 | 3 | 95 | 6 | 97 | 5.63e-23 | 99.8 |
| Msa0404700 | MtrunA17_Chr7g0267741 | 48.387 | 62 | 32 | 0 | 29 | 90 | 1 | 62 | 1.11e-13 | 65.1 |
| Msa0404700 | MtrunA17_Chr8g0379241 | 38.710 | 62 | 38 | 0 | 34 | 95 | 6 | 67 | 1.02e-11 | 65.9 |
| Msa0404700 | MtrunA17_Chr2g0284211 | 43.548 | 62 | 32 | 1 | 37 | 95 | 9 | 70 | 7.52e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0404700 | AT4G32410.1 | 59.259 | 189 | 70 | 5 | 3 | 190 | 6 | 188 | 2.44e-56 | 197 |
| Msa0404700 | AT5G11260.1 | 72.519 | 131 | 35 | 1 | 191 | 320 | 33 | 163 | 1.95e-55 | 178 |
| Msa0404700 | AT5G11260.2 | 72.174 | 115 | 31 | 1 | 191 | 304 | 33 | 147 | 8.14e-50 | 164 |
| Msa0404700 | AT2G25540.1 | 56.774 | 155 | 62 | 3 | 4 | 157 | 1 | 151 | 7.24e-49 | 175 |
| Msa0404700 | AT3G17609.2 | 55.372 | 121 | 47 | 3 | 193 | 308 | 23 | 141 | 4.04e-33 | 120 |
| Msa0404700 | AT3G17609.3 | 53.153 | 111 | 49 | 1 | 201 | 308 | 2 | 112 | 2.38e-30 | 112 |
| Msa0404700 | AT5G17420.1 | 58.065 | 93 | 36 | 2 | 3 | 95 | 6 | 95 | 3.27e-30 | 121 |
| Msa0404700 | AT5G05170.1 | 39.560 | 182 | 90 | 6 | 23 | 187 | 6 | 184 | 6.01e-29 | 117 |
| Msa0404700 | AT3G17609.1 | 63.750 | 80 | 29 | 0 | 229 | 308 | 48 | 127 | 1.89e-28 | 107 |
| Msa0404700 | AT3G17609.4 | 63.750 | 80 | 29 | 0 | 229 | 308 | 47 | 126 | 1.98e-28 | 107 |
| Msa0404700 | AT5G09870.1 | 40.110 | 182 | 99 | 6 | 7 | 187 | 10 | 182 | 4.42e-26 | 109 |
| Msa0404700 | AT4G39350.1 | 52.809 | 89 | 41 | 1 | 7 | 95 | 10 | 97 | 5.72e-25 | 106 |
| Msa0404700 | AT5G64740.1 | 52.809 | 89 | 41 | 1 | 7 | 95 | 10 | 97 | 3.92e-24 | 103 |
| Msa0404700 | AT2G21770.1 | 48.889 | 90 | 43 | 2 | 7 | 95 | 10 | 97 | 1.78e-21 | 95.9 |
| Msa0404700 | AT5G44030.2 | 42.529 | 87 | 48 | 1 | 31 | 115 | 17 | 103 | 8.87e-20 | 90.9 |
| Msa0404700 | AT5G44030.1 | 42.529 | 87 | 48 | 1 | 31 | 115 | 17 | 103 | 1.00e-19 | 90.5 |
| Msa0404700 | AT4G18780.1 | 33.333 | 111 | 64 | 2 | 36 | 145 | 8 | 109 | 3.30e-13 | 70.9 |
Find 115 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACCATTCAAATTCTTTA+AGG | 0.156035 | 3_2:-37171749 | None:intergenic |
| CCATTCAAATTTAGGTAGTA+TGG | 0.223722 | 3_2:+37174938 | Msa0404700:three_prime_UTR |
| AAGATGATGTCGACGATTTA+AGG | 0.228388 | 3_2:+37172053 | Msa0404700:CDS |
| AACTTTCTCCATTCAAATTT+AGG | 0.256523 | 3_2:+37174930 | Msa0404700:three_prime_UTR |
| ACCATTTGTTGAGGATATAA+AGG | 0.258610 | 3_2:+37175006 | Msa0404700:three_prime_UTR |
| ACAACATCTTTGAGAAGATT+TGG | 0.282405 | 3_2:+37170908 | Msa0404700:five_prime_UTR |
| TGCTGGTCCAGAACGTGTTC+AGG | 0.289263 | 3_2:+37173635 | Msa0404700:CDS |
| TAGCCGTTTGCTTTCTTTGT+CGG | 0.302350 | 3_2:-37173697 | None:intergenic |
| AACTCTGTACCTGGTTGCTT+TGG | 0.303795 | 3_2:-37172839 | None:intergenic |
| CTAATTTCATTCAGCATTGT+TGG | 0.308963 | 3_2:-37174595 | None:intergenic |
| AGACATGGTGTTTCTGAAAC+TGG | 0.316147 | 3_2:+37170997 | Msa0404700:CDS |
| GCTGACCTCTCTTCATCTTC+TGG | 0.318002 | 3_2:+37172136 | Msa0404700:CDS |
| GCAAGCAAGGGAGAGGAAAA+AGG | 0.332419 | 3_2:+37173870 | Msa0404700:CDS |
| GCAGATTCACCTCCCATATC+TGG | 0.342040 | 3_2:-37173576 | None:intergenic |
| ATTCTTTCTAGGTGTGCATT+TGG | 0.342651 | 3_2:+37174692 | Msa0404700:three_prime_UTR |
| CCAGCACCCTGAACACGTTC+TGG | 0.345136 | 3_2:-37173642 | None:intergenic |
| GCAAACTACATCAGGTCCTT+TGG | 0.365962 | 3_2:+37172778 | Msa0404700:CDS |
| TTTACGAGAGGCTGATGTTC+CGG | 0.366238 | 3_2:-37173598 | None:intergenic |
| TGACCATTCAAATTCTTTAA+GGG | 0.374526 | 3_2:-37171748 | None:intergenic |
| GATCAGAAGAGTGCCAGATA+TGG | 0.377906 | 3_2:+37173563 | Msa0404700:CDS |
| CGTTTGCTTTCTTTGTCGGC+TGG | 0.382290 | 3_2:-37173693 | None:intergenic |
| AAGATGGAAGGAATGGAAAC+AGG | 0.385284 | 3_2:+37170943 | Msa0404700:exon |
| TCTTGCATTGTGGACATGAT+TGG | 0.409151 | 3_2:-37171894 | None:intergenic |
| ATTTATTGTCTTAAACCTCT+TGG | 0.412809 | 3_2:+37175075 | Msa0404700:three_prime_UTR |
| CCAGAACGTGTTCAGGGTGC+TGG | 0.423989 | 3_2:+37173642 | Msa0404700:CDS |
| TTAAGGAATGAGGTCAAGTA+TGG | 0.424236 | 3_2:+37172070 | Msa0404700:CDS |
| CCATTTGTTGAGGATATAAA+GGG | 0.426493 | 3_2:+37175007 | Msa0404700:three_prime_UTR |
| GGTATACTATATATAGATAG+TGG | 0.427771 | 3_2:+37175096 | Msa0404700:three_prime_UTR |
| CAAACTACATCAGGTCCTTT+GGG | 0.435196 | 3_2:+37172779 | Msa0404700:CDS |
| CCATCTCACAAATGGACAAC+TGG | 0.446482 | 3_2:+37172183 | Msa0404700:CDS |
| CAAAATCCCCATCTCACAAA+TGG | 0.448984 | 3_2:+37172175 | Msa0404700:CDS |
| CCCTTTATATCCTCAACAAA+TGG | 0.452208 | 3_2:-37175007 | None:intergenic |
| CAGTTGTCCATTTGTGAGAT+GGG | 0.452668 | 3_2:-37172182 | None:intergenic |
| GCTCTGAATTCTTCTTCTCT+AGG | 0.454026 | 3_2:-37173927 | None:intergenic |
| GAAGAAGAAGATGGAAGGAA+TGG | 0.456318 | 3_2:+37170936 | Msa0404700:exon |
| GACATGGTGTTTCTGAAACT+GGG | 0.457929 | 3_2:+37170998 | Msa0404700:CDS |
| AAACCCTTAAAGAATTTGAA+TGG | 0.465051 | 3_2:+37171745 | Msa0404700:CDS |
| CCAGTTGTCCATTTGTGAGA+TGG | 0.468711 | 3_2:-37172183 | None:intergenic |
| GTTTGCTTTCTTTGTCGGCT+GGG | 0.469429 | 3_2:-37173692 | None:intergenic |
| TAGTGATAATCAAAACTTAG+AGG | 0.472931 | 3_2:+37174615 | Msa0404700:three_prime_UTR |
| GTGAAGCACTGACATGAAAA+CGG | 0.473292 | 3_2:+37174773 | Msa0404700:three_prime_UTR |
| CAATCTGTGCAAACTACATC+AGG | 0.479607 | 3_2:+37172770 | Msa0404700:CDS |
| ACGGGACATGTAATTGACTT+TGG | 0.479948 | 3_2:+37174792 | Msa0404700:three_prime_UTR |
| ATCAGAAGAGTGCCAGATAT+GGG | 0.480465 | 3_2:+37173564 | Msa0404700:CDS |
| GTATGATATAACTTCACAAA+TGG | 0.481787 | 3_2:-37175041 | None:intergenic |
| CCATACTACCTAAATTTGAA+TGG | 0.483920 | 3_2:-37174938 | None:intergenic |
| ATTGGATTCATTAGAATCAA+AGG | 0.493126 | 3_2:-37170806 | None:intergenic |
| GAGTTTCAGCTCAGCAAGCA+AGG | 0.496174 | 3_2:+37173857 | Msa0404700:CDS |
| AAAGGCACTGGTTCAACTGC+TGG | 0.500784 | 3_2:+37173618 | Msa0404700:CDS |
| TGCTAAGGCAGGATGGCAAT+GGG | 0.509509 | 3_2:+37172105 | Msa0404700:CDS |
| TGAAAATCAAATGCTGAGAC+AGG | 0.509539 | 3_2:+37173978 | Msa0404700:CDS |
| TGAAGCACTGACATGAAAAC+GGG | 0.511180 | 3_2:+37174774 | Msa0404700:three_prime_UTR |
| TTGGATTCATTAGAATCAAA+GGG | 0.511666 | 3_2:-37170805 | None:intergenic |
| ATTCTTGTTATGAATACGAA+TGG | 0.515816 | 3_2:+37171860 | Msa0404700:CDS |
| CAGCCGACAAAGAAAGCAAA+CGG | 0.518077 | 3_2:+37173694 | Msa0404700:CDS |
| AAGAAAGCAAACGGCTAAAG+AGG | 0.525143 | 3_2:+37173703 | Msa0404700:CDS |
| ATGCTAAGGCAGGATGGCAA+TGG | 0.525935 | 3_2:+37172104 | Msa0404700:CDS |
| CAAATATGTGGTGATACTGT+TGG | 0.528030 | 3_2:+37171778 | Msa0404700:CDS |
| CAGCTCAGCAAGCAAGGGAG+AGG | 0.533112 | 3_2:+37173863 | Msa0404700:CDS |
| GCTGGTCCAGAACGTGTTCA+GGG | 0.533529 | 3_2:+37173636 | Msa0404700:CDS |
| CGTGTTCAGGGTGCTGGAGA+GGG | 0.536653 | 3_2:+37173648 | Msa0404700:CDS |
| TAGAATCTCAACATGGTAGC+GGG | 0.541471 | 3_2:+37170844 | Msa0404700:five_prime_UTR |
| TCAGATGATCCTCGAGTGAA+AGG | 0.541668 | 3_2:+37172019 | Msa0404700:intron |
| ATGGATGTTACCATTTGTTG+AGG | 0.552414 | 3_2:+37174997 | Msa0404700:three_prime_UTR |
| CAAGGAAATAATGCTAAGGC+AGG | 0.555264 | 3_2:+37172094 | Msa0404700:CDS |
| TGGTTGCTTTGGATCAACAT+AGG | 0.561478 | 3_2:-37172828 | None:intergenic |
| AAAGGCATACTTGAGTGACT+TGG | 0.562983 | 3_2:+37173888 | Msa0404700:CDS |
| TGGAAACAGGGTCACATGAA+AGG | 0.564839 | 3_2:+37170956 | Msa0404700:CDS |
| AACACTACAGCTAGCAGGAG+AGG | 0.568592 | 3_2:+37174558 | Msa0404700:CDS |
| TTTGATTCTAATGAATCCAA+TGG | 0.569268 | 3_2:+37170808 | Msa0404700:five_prime_UTR |
| ACGTGTTCAGGGTGCTGGAG+AGG | 0.570680 | 3_2:+37173647 | Msa0404700:CDS |
| TCAGCCTCTCGTAAAGGCAC+TGG | 0.570711 | 3_2:+37173606 | Msa0404700:CDS |
| GGAACATCAGCCTCTCGTAA+AGG | 0.572244 | 3_2:+37173600 | Msa0404700:CDS |
| TGAAGAACACTACAGCTAGC+AGG | 0.574364 | 3_2:+37174553 | Msa0404700:CDS |
| GAAATAATGCTAAGGCAGGA+TGG | 0.579382 | 3_2:+37172098 | Msa0404700:CDS |
| GTATGGAGGTGAGTTACTAT+CGG | 0.580071 | 3_2:+37174955 | Msa0404700:three_prime_UTR |
| AGTGATAATCAAAACTTAGA+GGG | 0.583680 | 3_2:+37174616 | Msa0404700:three_prime_UTR |
| TCATCACCTCCTTTCACTCG+AGG | 0.584150 | 3_2:-37172028 | None:intergenic |
| GTGCATTTGGAATTTCATGA+AGG | 0.584245 | 3_2:+37174705 | Msa0404700:three_prime_UTR |
| AGTTGTCCATTTGTGAGATG+GGG | 0.584444 | 3_2:-37172181 | None:intergenic |
| AATGAGGTCAAGTATGGTCA+AGG | 0.586685 | 3_2:+37172076 | Msa0404700:CDS |
| ACTGTTGGATTAACAGCCAC+CGG | 0.592728 | 3_2:+37171793 | Msa0404700:CDS |
| AGTTTCAGCTCAGCAAGCAA+GGG | 0.598096 | 3_2:+37173858 | Msa0404700:CDS |
| TGGTCAAGGAAATAATGCTA+AGG | 0.601648 | 3_2:+37172090 | Msa0404700:CDS |
| GTATACTATATATAGATAGT+GGG | 0.604487 | 3_2:+37175097 | Msa0404700:three_prime_UTR |
| GGTCAAATCTGTCAAATATG+TGG | 0.604762 | 3_2:+37171766 | Msa0404700:CDS |
| TTGAATCTAGTCTTGCATTG+TGG | 0.607208 | 3_2:-37171904 | None:intergenic |
| CATAACAAGAATAACAAAGT+GGG | 0.607961 | 3_2:-37171849 | None:intergenic |
| TGTCGACGATTTAAGGAATG+AGG | 0.608917 | 3_2:+37172060 | Msa0404700:CDS |
| TTCAAATTTAGGTAGTATGG+AGG | 0.610153 | 3_2:+37174941 | Msa0404700:three_prime_UTR |
| AGCAGGAGAGGAAGCAACGG+TGG | 0.611550 | 3_2:+37174570 | Msa0404700:CDS |
| GCAAGCAACAAAGACTTCGC+CGG | 0.615968 | 3_2:-37171812 | None:intergenic |
| GCTAGCAGGAGAGGAAGCAA+CGG | 0.617888 | 3_2:+37174567 | Msa0404700:CDS |
| ATAGAATCTCAACATGGTAG+CGG | 0.621234 | 3_2:+37170843 | Msa0404700:five_prime_UTR |
| ACATGGTGTTTCTGAAACTG+GGG | 0.621880 | 3_2:+37170999 | Msa0404700:CDS |
| TATGTTGATCCAAAGCAACC+AGG | 0.626073 | 3_2:+37172830 | Msa0404700:CDS |
| AGCAACAAAGACTTCGCCGG+TGG | 0.627106 | 3_2:-37171809 | None:intergenic |
| TGAACCAGTGCCTTTACGAG+AGG | 0.628738 | 3_2:-37173610 | None:intergenic |
| TCATAACAAGAATAACAAAG+TGG | 0.629424 | 3_2:-37171850 | None:intergenic |
| ACTAGATTCAAAAGTCACAA+AGG | 0.638228 | 3_2:+37171916 | Msa0404700:CDS |
| AGATGGAAGGAATGGAAACA+GGG | 0.639774 | 3_2:+37170944 | Msa0404700:exon |
| GAACTTGTTCGAGCTAGACA+TGG | 0.640606 | 3_2:+37170982 | Msa0404700:CDS |
| GATATGGGAGGTGAATCTGC+CGG | 0.641842 | 3_2:+37173579 | Msa0404700:CDS |
| GGAGAGGGTCAAAAGAAGAG+AGG | 0.648990 | 3_2:+37173663 | Msa0404700:CDS |
| CATGTCCAGAAGATGAAGAG+AGG | 0.650710 | 3_2:-37172141 | None:intergenic |
| AAAATGGTAATAGGCTACTG+AGG | 0.652705 | 3_2:+37173830 | Msa0404700:intron |
| GATGATCCTCGAGTGAAAGG+AGG | 0.657821 | 3_2:+37172022 | Msa0404700:intron |
| ACAAGAATAACAAAGTGGGA+AGG | 0.660604 | 3_2:-37171845 | None:intergenic |
| TGAGTATCAGAAGTAGCACA+TGG | 0.676546 | 3_2:-37172749 | None:intergenic |
| TCTATATATAGTATACCAAG+AGG | 0.679813 | 3_2:-37175090 | None:intergenic |
| GTGTAAAACACTGATACATG+AGG | 0.689531 | 3_2:-37174860 | None:intergenic |
| AGAAGAGTGCCAGATATGGG+AGG | 0.694389 | 3_2:+37173567 | Msa0404700:CDS |
| AAAGTGGGAAGGAACACTCG+TGG | 0.715900 | 3_2:-37171834 | None:intergenic |
| TCCAGGTCTTGAGAGTGACG+AGG | 0.727846 | 3_2:+37173539 | Msa0404700:intron |
| ATATGCATAGAATCTCAACA+TGG | 0.764099 | 3_2:+37170837 | Msa0404700:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAAAAAATAATAATATGT+AGG | + | chr3_2:37171373-37171392 | Msa0404700:intron | 10.0% |
| !! | ATTATATGTGAAATAATATT+TGG | + | chr3_2:37172665-37172684 | Msa0404700:intron | 10.0% |
| !!! | TTTTTGTAATAATTTCATTA+TGG | + | chr3_2:37174978-37174997 | Msa0404700:three_prime_UTR | 10.0% |
| !!! | AAATTCAAACTTTAAAAAGA+AGG | - | chr3_2:37171095-37171114 | None:intergenic | 15.0% |
| !! | TTAACTTATATATTCACAAT+TGG | + | chr3_2:37172274-37172293 | Msa0404700:intron | 15.0% |
| !!! | TCATTTGAACTTTTTAAAAT+CGG | + | chr3_2:37172447-37172466 | Msa0404700:intron | 15.0% |
| !! | GTTTAAGAAAGTAAAATTTA+TGG | + | chr3_2:37172514-37172533 | Msa0404700:intron | 15.0% |
| !!! | ATACTAACTGTATATTTTTA+TGG | + | chr3_2:37172707-37172726 | Msa0404700:intron | 15.0% |
| !!! | TCTAAAATATTGTTTTAGAA+AGG | + | chr3_2:37174193-37174212 | Msa0404700:intron | 15.0% |
| !!! | ATTTTCTTGTTTTTCTTTTC+TGG | + | chr3_2:37171051-37171070 | Msa0404700:intron | 20.0% |
| !!! | TTTTCTTGTTTTTCTTTTCT+GGG | + | chr3_2:37171052-37171071 | Msa0404700:intron | 20.0% |
| !!! | TTTTATGCTTGAAATGAAAA+TGG | + | chr3_2:37171113-37171132 | Msa0404700:intron | 20.0% |
| !! | TTTATGCTTGAAATGAAAAT+GGG | + | chr3_2:37171114-37171133 | Msa0404700:intron | 20.0% |
| !! | TCTTAATATAGAGTTTAGAA+AGG | + | chr3_2:37171277-37171296 | Msa0404700:intron | 20.0% |
| !! | CTTAATATAGAGTTTAGAAA+GGG | + | chr3_2:37171278-37171297 | Msa0404700:intron | 20.0% |
| !!! | TGTATTTTGCAATTAATATG+TGG | + | chr3_2:37171329-37171348 | Msa0404700:intron | 20.0% |
| !!! | ATACATTTCATTGCTAATTT+TGG | + | chr3_2:37171600-37171619 | Msa0404700:intron | 20.0% |
| !! | AAAGTTTATGCATATTGAAA+AGG | - | chr3_2:37172959-37172978 | None:intergenic | 20.0% |
| !! | ATAGAAGTAAAAGTCTTTAT+AGG | + | chr3_2:37173013-37173032 | Msa0404700:intron | 20.0% |
| !! | CTCAATTTAGAAAATGAAAA+AGG | - | chr3_2:37173078-37173097 | None:intergenic | 20.0% |
| !! | ATACATTAAAGGAATTCTAT+CGG | - | chr3_2:37173271-37173290 | None:intergenic | 20.0% |
| !! | CATCACATGAATAAATAAAA+TGG | + | chr3_2:37173457-37173476 | Msa0404700:intron | 20.0% |
| !! | AATAAAATGGTAATCTTGAT+TGG | + | chr3_2:37173470-37173489 | Msa0404700:intron | 20.0% |
| !! | AATACTAACAATATTGACAT+AGG | - | chr3_2:37174376-37174395 | None:intergenic | 20.0% |
| !! | TTCATTTAATGGTATATGAT+TGG | + | chr3_2:37174516-37174535 | Msa0404700:intron | 20.0% |
| !! | GTATACTATATATAGATAGT+GGG | + | chr3_2:37175097-37175116 | Msa0404700:three_prime_UTR | 20.0% |
| ! | ATTGGATTCATTAGAATCAA+AGG | - | chr3_2:37170809-37170828 | None:intergenic | 25.0% |
| ! | TTTGATTCTAATGAATCCAA+TGG | + | chr3_2:37170808-37170827 | Msa0404700:five_prime_UTR | 25.0% |
| ! | AACTAAATCATAGCTAAATG+AGG | - | chr3_2:37171191-37171210 | None:intergenic | 25.0% |
| ! | AATTAGCAATGAAATGTATC+TGG | - | chr3_2:37171599-37171618 | None:intergenic | 25.0% |
| ! | AAACCCTTAAAGAATTTGAA+TGG | + | chr3_2:37171745-37171764 | Msa0404700:CDS | 25.0% |
| ! | TGACCATTCAAATTCTTTAA+GGG | - | chr3_2:37171751-37171770 | None:intergenic | 25.0% |
| ! | TTGACCATTCAAATTCTTTA+AGG | - | chr3_2:37171752-37171771 | None:intergenic | 25.0% |
| ! | CATAACAAGAATAACAAAGT+GGG | - | chr3_2:37171852-37171871 | None:intergenic | 25.0% |
| ! | TCATAACAAGAATAACAAAG+TGG | - | chr3_2:37171853-37171872 | None:intergenic | 25.0% |
| !! | ATTCTTGTTATGAATACGAA+TGG | + | chr3_2:37171860-37171879 | Msa0404700:CDS | 25.0% |
| !! | AATTTTCAGACTCTTGAATT+CGG | + | chr3_2:37172221-37172240 | Msa0404700:intron | 25.0% |
| !! | ATAAGTTAACACATTTTTGC+AGG | - | chr3_2:37172263-37172282 | None:intergenic | 25.0% |
| ! | AACATTAAAAGTGAAGAAGT+AGG | - | chr3_2:37172325-37172344 | None:intergenic | 25.0% |
| !!! | TTCTATTGTGAGTATTTTGA+AGG | - | chr3_2:37172999-37173018 | None:intergenic | 25.0% |
| !! | TTCCATTTTCTCATTATTAC+CGG | + | chr3_2:37173387-37173406 | Msa0404700:intron | 25.0% |
| !!! | ATAAAATACTAGCATTGACA+TGG | - | chr3_2:37173428-37173447 | None:intergenic | 25.0% |
| ! | ATGAATCAATCATAGGAAAA+AGG | - | chr3_2:37173771-37173790 | None:intergenic | 25.0% |
| ! | AAATGCTATGAATCAATCAT+AGG | - | chr3_2:37173778-37173797 | None:intergenic | 25.0% |
| !!! | GTAATTTGTTTGTTACATTG+TGG | + | chr3_2:37173801-37173820 | Msa0404700:intron | 25.0% |
| ! | GGTATTATTGTTCTTTAGAT+AGG | + | chr3_2:37174089-37174108 | Msa0404700:intron | 25.0% |
| !!! | AAATGACACTCATTTTGAAA+TGG | - | chr3_2:37174231-37174250 | None:intergenic | 25.0% |
| !!! | TTCAAAATGAGTGTCATTTA+AGG | + | chr3_2:37174232-37174251 | Msa0404700:intron | 25.0% |
| ! | ATACACACCAATAATTGATA+GGG | - | chr3_2:37174320-37174339 | None:intergenic | 25.0% |
| ! | TGTTAGTATTATGTTTAGAG+TGG | + | chr3_2:37174386-37174405 | Msa0404700:intron | 25.0% |
| !! | GTTAGTATTATGTTTAGAGT+GGG | + | chr3_2:37174387-37174406 | Msa0404700:intron | 25.0% |
| !! | TTAGTATTATGTTTAGAGTG+GGG | + | chr3_2:37174388-37174407 | Msa0404700:intron | 25.0% |
| !!! | AATTTTTGGGGATAAAATGA+TGG | - | chr3_2:37174462-37174481 | None:intergenic | 25.0% |
| ! | TGAACTAGAATATGCAAATT+TGG | - | chr3_2:37174500-37174519 | None:intergenic | 25.0% |
| !!! | GCATATTCTAGTTCATTTAA+TGG | + | chr3_2:37174505-37174524 | Msa0404700:intron | 25.0% |
| ! | TAGTGATAATCAAAACTTAG+AGG | + | chr3_2:37174615-37174634 | Msa0404700:three_prime_UTR | 25.0% |
| ! | AGTGATAATCAAAACTTAGA+GGG | + | chr3_2:37174616-37174635 | Msa0404700:three_prime_UTR | 25.0% |
| !!! | TAGTTTTGATGATTCTTTCT+AGG | + | chr3_2:37174681-37174700 | Msa0404700:three_prime_UTR | 25.0% |
| !! | ATATCAAAACACGATGTTTT+AGG | - | chr3_2:37174753-37174772 | None:intergenic | 25.0% |
| ! | AACTTTCTCCATTCAAATTT+AGG | + | chr3_2:37174930-37174949 | Msa0404700:three_prime_UTR | 25.0% |
| ! | GTATGATATAACTTCACAAA+TGG | - | chr3_2:37175044-37175063 | None:intergenic | 25.0% |
| ! | ATTTATTGTCTTAAACCTCT+TGG | + | chr3_2:37175075-37175094 | Msa0404700:three_prime_UTR | 25.0% |
| ! | TCTATATATAGTATACCAAG+AGG | - | chr3_2:37175093-37175112 | None:intergenic | 25.0% |
| ! | GGTATACTATATATAGATAG+TGG | + | chr3_2:37175096-37175115 | Msa0404700:three_prime_UTR | 25.0% |
| !!! | CTATGCATATTTTTAGCCAT+TGG | - | chr3_2:37170827-37170846 | None:intergenic | 30.0% |
| ATATGCATAGAATCTCAACA+TGG | + | chr3_2:37170837-37170856 | Msa0404700:five_prime_UTR | 30.0% | |
| ! | ACAACATCTTTGAGAAGATT+TGG | + | chr3_2:37170908-37170927 | Msa0404700:five_prime_UTR | 30.0% |
| ! | CTGAAGATTATAAAAGCATG+AGG | + | chr3_2:37171482-37171501 | Msa0404700:intron | 30.0% |
| ! | GATTATAAAAGCATGAGGTT+TGG | + | chr3_2:37171487-37171506 | Msa0404700:intron | 30.0% |
| ! | TAACTTGTGAGAAATTGATC+TGG | + | chr3_2:37171653-37171672 | Msa0404700:intron | 30.0% |
| ACTAGATTCAAAAGTCACAA+AGG | + | chr3_2:37171916-37171935 | Msa0404700:CDS | 30.0% | |
| !! | TATTTTTATGGTCAGATGTC+TGG | + | chr3_2:37172719-37172738 | Msa0404700:intron | 30.0% |
| GACACAGAAAAACAAAATTG+TGG | - | chr3_2:37173041-37173060 | None:intergenic | 30.0% | |
| ! | TCTAAATTGAGAGTCAGTTT+TGG | + | chr3_2:37173087-37173106 | Msa0404700:intron | 30.0% |
| ! | ACTTTTGAACAAACACTTGT+AGG | + | chr3_2:37173113-37173132 | Msa0404700:intron | 30.0% |
| ! | ATTGGCCTAGATAATTTACT+TGG | + | chr3_2:37173488-37173507 | Msa0404700:intron | 30.0% |
| TTGGCCTAGATAATTTACTT+GGG | + | chr3_2:37173489-37173508 | Msa0404700:intron | 30.0% | |
| CAAACCCAAGTAAATTATCT+AGG | - | chr3_2:37173496-37173515 | None:intergenic | 30.0% | |
| AGAACAATAATACCATGACA+GGG | - | chr3_2:37174083-37174102 | None:intergenic | 30.0% | |
| AAGAACAATAATACCATGAC+AGG | - | chr3_2:37174084-37174103 | None:intergenic | 30.0% | |
| AAACCAACCCTATCAATTAT+TGG | + | chr3_2:37174310-37174329 | Msa0404700:intron | 30.0% | |
| GATACACACCAATAATTGAT+AGG | - | chr3_2:37174321-37174340 | None:intergenic | 30.0% | |
| ! | ATTCACAGGGAGAAATTTTT+GGG | - | chr3_2:37174475-37174494 | None:intergenic | 30.0% |
| ! | AATTCACAGGGAGAAATTTT+TGG | - | chr3_2:37174476-37174495 | None:intergenic | 30.0% |
| CTAATTTCATTCAGCATTGT+TGG | - | chr3_2:37174598-37174617 | None:intergenic | 30.0% | |
| CCATACTACCTAAATTTGAA+TGG | - | chr3_2:37174941-37174960 | None:intergenic | 30.0% | |
| CCATTCAAATTTAGGTAGTA+TGG | + | chr3_2:37174938-37174957 | Msa0404700:three_prime_UTR | 30.0% | |
| TTCAAATTTAGGTAGTATGG+AGG | + | chr3_2:37174941-37174960 | Msa0404700:three_prime_UTR | 30.0% | |
| ! | ACCATTTGTTGAGGATATAA+AGG | + | chr3_2:37175006-37175025 | Msa0404700:three_prime_UTR | 30.0% |
| ! | CCATTTGTTGAGGATATAAA+GGG | + | chr3_2:37175007-37175026 | Msa0404700:three_prime_UTR | 30.0% |
| ATAGAATCTCAACATGGTAG+CGG | + | chr3_2:37170843-37170862 | Msa0404700:five_prime_UTR | 35.0% | |
| TTGGAAGAAGAAGAAGAAGA+TGG | + | chr3_2:37170927-37170946 | Msa0404700:exon | 35.0% | |
| AAGAAGAAGAAGAAGATGGA+AGG | + | chr3_2:37170931-37170950 | Msa0404700:exon | 35.0% | |
| TTTAGAAGTTTGTCACCTGT+AGG | + | chr3_2:37171409-37171428 | Msa0404700:intron | 35.0% | |
| AGAACCATGATTGTAGTTTG+TGG | + | chr3_2:37171542-37171561 | Msa0404700:intron | 35.0% | |
| CAAACCACAAACTACAATCA+TGG | - | chr3_2:37171549-37171568 | None:intergenic | 35.0% | |
| TGTGAGAAATTGATCTGGAT+AGG | + | chr3_2:37171658-37171677 | Msa0404700:intron | 35.0% | |
| GGTCAAATCTGTCAAATATG+TGG | + | chr3_2:37171766-37171785 | Msa0404700:CDS | 35.0% | |
| CAAATATGTGGTGATACTGT+TGG | + | chr3_2:37171778-37171797 | Msa0404700:CDS | 35.0% | |
| ACAAGAATAACAAAGTGGGA+AGG | - | chr3_2:37171848-37171867 | None:intergenic | 35.0% | |
| !! | TTGAATCTAGTCTTGCATTG+TGG | - | chr3_2:37171907-37171926 | None:intergenic | 35.0% |
| ATCCACATTCATCTTGTTCA+TGG | - | chr3_2:37171998-37172017 | None:intergenic | 35.0% | |
| AAGATGATGTCGACGATTTA+AGG | + | chr3_2:37172053-37172072 | Msa0404700:CDS | 35.0% | |
| TTAAGGAATGAGGTCAAGTA+TGG | + | chr3_2:37172070-37172089 | Msa0404700:CDS | 35.0% | |
| TGGTCAAGGAAATAATGCTA+AGG | + | chr3_2:37172090-37172109 | Msa0404700:CDS | 35.0% | |
| ! | ATTTTGAGCCAAGATGTAGA+AGG | + | chr3_2:37172580-37172599 | Msa0404700:intron | 35.0% |
| ! | TTTTGAGCCAAGATGTAGAA+GGG | + | chr3_2:37172581-37172600 | Msa0404700:intron | 35.0% |
| TGCTACACTACAATCATTTC+AGG | - | chr3_2:37172867-37172886 | None:intergenic | 35.0% | |
| GTGTAGCATATCACATTTCA+TGG | + | chr3_2:37172879-37172898 | Msa0404700:intron | 35.0% | |
| !! | GTATTTTGAAGGAACTGGAA+AGG | - | chr3_2:37172988-37173007 | None:intergenic | 35.0% |
| !! | TGTGAGTATTTTGAAGGAAC+TGG | - | chr3_2:37172993-37173012 | None:intergenic | 35.0% |
| CAACAGGAGTGATACATTAA+AGG | - | chr3_2:37173282-37173301 | None:intergenic | 35.0% | |
| ! | CTGAAGTGTTAGTATCACAT+GGG | - | chr3_2:37173316-37173335 | None:intergenic | 35.0% |
| ! | TCTGAAGTGTTAGTATCACA+TGG | - | chr3_2:37173317-37173336 | None:intergenic | 35.0% |
| CACCGGTAATAATGAGAAAA+TGG | - | chr3_2:37173392-37173411 | None:intergenic | 35.0% | |
| GTTTGAACTCTTAGTGACTT+TGG | + | chr3_2:37173511-37173530 | Msa0404700:intron | 35.0% | |
| !! | TAGTGACTTTGGAATAATCC+AGG | + | chr3_2:37173522-37173541 | Msa0404700:intron | 35.0% |
| CAATCATAGGAAAAAGGAGT+TGG | - | chr3_2:37173765-37173784 | None:intergenic | 35.0% | |
| TACATTGTGGCGTGTAAAAA+TGG | + | chr3_2:37173814-37173833 | Msa0404700:intron | 35.0% | |
| TGGCGTGTAAAAATGGTAAT+AGG | + | chr3_2:37173821-37173840 | Msa0404700:intron | 35.0% | |
| AAAATGGTAATAGGCTACTG+AGG | + | chr3_2:37173830-37173849 | Msa0404700:intron | 35.0% | |
| TGAAAATCAAATGCTGAGAC+AGG | + | chr3_2:37173978-37173997 | Msa0404700:CDS | 35.0% | |
| ! | CAAAGGCATGTTGATGTAAT+TGG | - | chr3_2:37174022-37174041 | None:intergenic | 35.0% |
| TTTAGATAGGTTACATGAGC+TGG | + | chr3_2:37174102-37174121 | Msa0404700:intron | 35.0% | |
| !!! | GACACTCATTTTGAAATGGA+GGG | - | chr3_2:37174227-37174246 | None:intergenic | 35.0% |
| !!! | TGACACTCATTTTGAAATGG+AGG | - | chr3_2:37174228-37174247 | None:intergenic | 35.0% |
| ACACCAATAATTGATAGGGT+TGG | - | chr3_2:37174316-37174335 | None:intergenic | 35.0% | |
| !! | AAAATGATGGTTTGGTGGAA+GGG | - | chr3_2:37174449-37174468 | None:intergenic | 35.0% |
| !! | TAAAATGATGGTTTGGTGGA+AGG | - | chr3_2:37174450-37174469 | None:intergenic | 35.0% |
| TTGGGGATAAAATGATGGTT+TGG | - | chr3_2:37174457-37174476 | None:intergenic | 35.0% | |
| ! | TTCACAGGGAGAAATTTTTG+GGG | - | chr3_2:37174474-37174493 | None:intergenic | 35.0% |
| TGCAAATTTGGCAATTCACA+GGG | - | chr3_2:37174488-37174507 | None:intergenic | 35.0% | |
| ATGCAAATTTGGCAATTCAC+AGG | - | chr3_2:37174489-37174508 | None:intergenic | 35.0% | |
| ATTCTTTCTAGGTGTGCATT+TGG | + | chr3_2:37174692-37174711 | Msa0404700:three_prime_UTR | 35.0% | |
| ! | GTGCATTTGGAATTTCATGA+AGG | + | chr3_2:37174705-37174724 | Msa0404700:three_prime_UTR | 35.0% |
| GTGTAAAACACTGATACATG+AGG | - | chr3_2:37174863-37174882 | None:intergenic | 35.0% | |
| ! | ATGGATGTTACCATTTGTTG+AGG | + | chr3_2:37174997-37175016 | Msa0404700:three_prime_UTR | 35.0% |
| CCCTTTATATCCTCAACAAA+TGG | - | chr3_2:37175010-37175029 | None:intergenic | 35.0% | |
| TAGAATCTCAACATGGTAGC+GGG | + | chr3_2:37170844-37170863 | Msa0404700:five_prime_UTR | 40.0% | |
| GAAGAAGAAGATGGAAGGAA+TGG | + | chr3_2:37170936-37170955 | Msa0404700:exon | 40.0% | |
| AAGATGGAAGGAATGGAAAC+AGG | + | chr3_2:37170943-37170962 | Msa0404700:exon | 40.0% | |
| AGATGGAAGGAATGGAAACA+GGG | + | chr3_2:37170944-37170963 | Msa0404700:exon | 40.0% | |
| !! | AGACATGGTGTTTCTGAAAC+TGG | + | chr3_2:37170997-37171016 | Msa0404700:CDS | 40.0% |
| !! | GACATGGTGTTTCTGAAACT+GGG | + | chr3_2:37170998-37171017 | Msa0404700:CDS | 40.0% |
| !! | ACATGGTGTTTCTGAAACTG+GGG | + | chr3_2:37170999-37171018 | Msa0404700:CDS | 40.0% |
| ! | GTTTGTGGTTCTGTTTGGAT+CGG | + | chr3_2:37171435-37171454 | Msa0404700:intron | 40.0% |
| !! | TTCTGTTTGGATCGGTTTTG+AGG | + | chr3_2:37171443-37171462 | Msa0404700:intron | 40.0% |
| AGGCTTAAATCGTGCTTGTA+TGG | + | chr3_2:37171678-37171697 | Msa0404700:intron | 40.0% | |
| TCTTGCATTGTGGACATGAT+TGG | - | chr3_2:37171897-37171916 | None:intergenic | 40.0% | |
| !! | AAGGTTAGCTTGTGATCACA+TGG | + | chr3_2:37171935-37171954 | Msa0404700:intron | 40.0% |
| TCATGGCAAAATCTGATGAG+AGG | - | chr3_2:37171981-37172000 | None:intergenic | 40.0% | |
| TGCCATGAACAAGATGAATG+TGG | + | chr3_2:37171993-37172012 | Msa0404700:intron | 40.0% | |
| TGTCGACGATTTAAGGAATG+AGG | + | chr3_2:37172060-37172079 | Msa0404700:CDS | 40.0% | |
| AATGAGGTCAAGTATGGTCA+AGG | + | chr3_2:37172076-37172095 | Msa0404700:CDS | 40.0% | |
| CAAGGAAATAATGCTAAGGC+AGG | + | chr3_2:37172094-37172113 | Msa0404700:CDS | 40.0% | |
| GAAATAATGCTAAGGCAGGA+TGG | + | chr3_2:37172098-37172117 | Msa0404700:CDS | 40.0% | |
| CAAAATCCCCATCTCACAAA+TGG | + | chr3_2:37172175-37172194 | Msa0404700:CDS | 40.0% | |
| AGTTGTCCATTTGTGAGATG+GGG | - | chr3_2:37172184-37172203 | None:intergenic | 40.0% | |
| CAGTTGTCCATTTGTGAGAT+GGG | - | chr3_2:37172185-37172204 | None:intergenic | 40.0% | |
| TGAGTATCAGAAGTAGCACA+TGG | - | chr3_2:37172752-37172771 | None:intergenic | 40.0% | |
| CAATCTGTGCAAACTACATC+AGG | + | chr3_2:37172770-37172789 | Msa0404700:CDS | 40.0% | |
| CAAACTACATCAGGTCCTTT+GGG | + | chr3_2:37172779-37172798 | Msa0404700:CDS | 40.0% | |
| ! | ACATTTTCGGATTGACCCAA+AGG | - | chr3_2:37172797-37172816 | None:intergenic | 40.0% |
| ! | TGGTTGCTTTGGATCAACAT+AGG | - | chr3_2:37172831-37172850 | None:intergenic | 40.0% |
| TATGTTGATCCAAAGCAACC+AGG | + | chr3_2:37172830-37172849 | Msa0404700:CDS | 40.0% | |
| AAGAGGATTACTGGTGCTTA+TGG | - | chr3_2:37173246-37173265 | None:intergenic | 40.0% | |
| AAGGAATTCTATCGGTCAAG+AGG | - | chr3_2:37173263-37173282 | None:intergenic | 40.0% | |
| ! | CTTCAGATTGAAAGCATGTC+CGG | + | chr3_2:37173330-37173349 | Msa0404700:intron | 40.0% |
| ATTATTACCGGTGTCCTGTT+AGG | + | chr3_2:37173399-37173418 | Msa0404700:intron | 40.0% | |
| !! | ATCAGAAGAGTGCCAGATAT+GGG | + | chr3_2:37173564-37173583 | Msa0404700:CDS | 40.0% |
| TAGCCGTTTGCTTTCTTTGT+CGG | - | chr3_2:37173700-37173719 | None:intergenic | 40.0% | |
| AAGAAAGCAAACGGCTAAAG+AGG | + | chr3_2:37173703-37173722 | Msa0404700:CDS | 40.0% | |
| GAAAAAGGAGTTGGAGTTCA+TGG | - | chr3_2:37173756-37173775 | None:intergenic | 40.0% | |
| ! | AAAGGCATACTTGAGTGACT+TGG | + | chr3_2:37173888-37173907 | Msa0404700:CDS | 40.0% |
| ! | GCTCTGAATTCTTCTTCTCT+AGG | - | chr3_2:37173930-37173949 | None:intergenic | 40.0% |
| ! | ACACAATGATGACGAGACAA+AGG | - | chr3_2:37174039-37174058 | None:intergenic | 40.0% |
| !! | AAATGATGGTTTGGTGGAAG+GGG | - | chr3_2:37174448-37174467 | None:intergenic | 40.0% |
| ! | GGGATAAAATGATGGTTTGG+TGG | - | chr3_2:37174454-37174473 | None:intergenic | 40.0% |
| !! | GTGAAGCACTGACATGAAAA+CGG | + | chr3_2:37174773-37174792 | Msa0404700:three_prime_UTR | 40.0% |
| !! | TGAAGCACTGACATGAAAAC+GGG | + | chr3_2:37174774-37174793 | Msa0404700:three_prime_UTR | 40.0% |
| ! | ACGGGACATGTAATTGACTT+TGG | + | chr3_2:37174792-37174811 | Msa0404700:three_prime_UTR | 40.0% |
| GTATGGAGGTGAGTTACTAT+CGG | + | chr3_2:37174955-37174974 | Msa0404700:three_prime_UTR | 40.0% | |
| TGGAAACAGGGTCACATGAA+AGG | + | chr3_2:37170956-37170975 | Msa0404700:CDS | 45.0% | |
| ! | GAACTTGTTCGAGCTAGACA+TGG | + | chr3_2:37170982-37171001 | Msa0404700:CDS | 45.0% |
| AGAACCACAAACACTCCTAC+AGG | - | chr3_2:37171427-37171446 | None:intergenic | 45.0% | |
| ! | GGAGTGTTTGTGGTTCTGTT+TGG | + | chr3_2:37171430-37171449 | Msa0404700:intron | 45.0% |
| TAGTCTCAATTGCCTGACAC+GGG | - | chr3_2:37171519-37171538 | None:intergenic | 45.0% | |
| CTAGTCTCAATTGCCTGACA+CGG | - | chr3_2:37171520-37171539 | None:intergenic | 45.0% | |
| ACTGTTGGATTAACAGCCAC+CGG | + | chr3_2:37171793-37171812 | Msa0404700:CDS | 45.0% | |
| TCAGATGATCCTCGAGTGAA+AGG | + | chr3_2:37172019-37172038 | Msa0404700:intron | 45.0% | |
| CATGTCCAGAAGATGAAGAG+AGG | - | chr3_2:37172144-37172163 | None:intergenic | 45.0% | |
| CCAGTTGTCCATTTGTGAGA+TGG | - | chr3_2:37172186-37172205 | None:intergenic | 45.0% | |
| CCATCTCACAAATGGACAAC+TGG | + | chr3_2:37172183-37172202 | Msa0404700:CDS | 45.0% | |
| TGCTGTTCCCTTCTACATCT+TGG | - | chr3_2:37172591-37172610 | None:intergenic | 45.0% | |
| GCAAACTACATCAGGTCCTT+TGG | + | chr3_2:37172778-37172797 | Msa0404700:CDS | 45.0% | |
| ! | GGCACGTGAGTGAACATTTT+CGG | - | chr3_2:37172810-37172829 | None:intergenic | 45.0% |
| AACTCTGTACCTGGTTGCTT+TGG | - | chr3_2:37172842-37172861 | None:intergenic | 45.0% | |
| TTTCAGGCTAACTCTGTACC+TGG | - | chr3_2:37172851-37172870 | None:intergenic | 45.0% | |
| !! | GCGAGTTTCTGAAATAGTCG+AGG | - | chr3_2:37173210-37173229 | None:intergenic | 45.0% |
| CTATCGGTCAAGAGGATTAC+TGG | - | chr3_2:37173255-37173274 | None:intergenic | 45.0% | |
| ATGGGTGAGTACTACACAAC+AGG | - | chr3_2:37173298-37173317 | None:intergenic | 45.0% | |
| CATTGACATGGACACCTAAC+AGG | - | chr3_2:37173416-37173435 | None:intergenic | 45.0% | |
| !! | GATCAGAAGAGTGCCAGATA+TGG | + | chr3_2:37173563-37173582 | Msa0404700:CDS | 45.0% |
| TTTACGAGAGGCTGATGTTC+CGG | - | chr3_2:37173601-37173620 | None:intergenic | 45.0% | |
| ! | GTTTGCTTTCTTTGTCGGCT+GGG | - | chr3_2:37173695-37173714 | None:intergenic | 45.0% |
| CAGCCGACAAAGAAAGCAAA+CGG | + | chr3_2:37173694-37173713 | Msa0404700:CDS | 45.0% | |
| AGTTTCAGCTCAGCAAGCAA+GGG | + | chr3_2:37173858-37173877 | Msa0404700:CDS | 45.0% | |
| ! | TCTGTAAAGCATCCCTGTCA+TGG | + | chr3_2:37174068-37174087 | Msa0404700:intron | 45.0% |
| GGTGGAAGAGTAAAGTAAGG+AGG | - | chr3_2:37174427-37174446 | None:intergenic | 45.0% | |
| AGGGGTGGAAGAGTAAAGTA+AGG | - | chr3_2:37174430-37174449 | None:intergenic | 45.0% | |
| TGAAGAACACTACAGCTAGC+AGG | + | chr3_2:37174553-37174572 | Msa0404700:CDS | 45.0% | |
| !! | GGTGTTTCTGAAACTGGGGT+TGG | + | chr3_2:37171003-37171022 | Msa0404700:intron | 50.0% |
| !! | GTCACCTGTAGGAGTGTTTG+TGG | + | chr3_2:37171420-37171439 | Msa0404700:intron | 50.0% |
| CGTGTCAGGCAATTGAGACT+AGG | + | chr3_2:37171518-37171537 | Msa0404700:intron | 50.0% | |
| GCAAGCAACAAAGACTTCGC+CGG | - | chr3_2:37171815-37171834 | None:intergenic | 50.0% | |
| AAAGTGGGAAGGAACACTCG+TGG | - | chr3_2:37171837-37171856 | None:intergenic | 50.0% | |
| GATGATCCTCGAGTGAAAGG+AGG | + | chr3_2:37172022-37172041 | Msa0404700:intron | 50.0% | |
| TCATCACCTCCTTTCACTCG+AGG | - | chr3_2:37172031-37172050 | None:intergenic | 50.0% | |
| ATGCTAAGGCAGGATGGCAA+TGG | + | chr3_2:37172104-37172123 | Msa0404700:CDS | 50.0% | |
| TGCTAAGGCAGGATGGCAAT+GGG | + | chr3_2:37172105-37172124 | Msa0404700:CDS | 50.0% | |
| GCTGACCTCTCTTCATCTTC+TGG | + | chr3_2:37172136-37172155 | Msa0404700:CDS | 50.0% | |
| ! | CACGTGTCATTGTCAGACAC+CGG | - | chr3_2:37173352-37173371 | None:intergenic | 50.0% |
| ATGGACACCTAACAGGACAC+CGG | - | chr3_2:37173409-37173428 | None:intergenic | 50.0% | |
| !! | AGAAGAGTGCCAGATATGGG+AGG | + | chr3_2:37173567-37173586 | Msa0404700:CDS | 50.0% |
| GCAGATTCACCTCCCATATC+TGG | - | chr3_2:37173579-37173598 | None:intergenic | 50.0% | |
| GATATGGGAGGTGAATCTGC+CGG | + | chr3_2:37173579-37173598 | Msa0404700:CDS | 50.0% | |
| GGAACATCAGCCTCTCGTAA+AGG | + | chr3_2:37173600-37173619 | Msa0404700:CDS | 50.0% | |
| TGAACCAGTGCCTTTACGAG+AGG | - | chr3_2:37173613-37173632 | None:intergenic | 50.0% | |
| !! | AAAGGCACTGGTTCAACTGC+TGG | + | chr3_2:37173618-37173637 | Msa0404700:CDS | 50.0% |
| GGAGAGGGTCAAAAGAAGAG+AGG | + | chr3_2:37173663-37173682 | Msa0404700:CDS | 50.0% | |
| CGTTTGCTTTCTTTGTCGGC+TGG | - | chr3_2:37173696-37173715 | None:intergenic | 50.0% | |
| GAGTTTCAGCTCAGCAAGCA+AGG | + | chr3_2:37173857-37173876 | Msa0404700:CDS | 50.0% | |
| GCAAGCAAGGGAGAGGAAAA+AGG | + | chr3_2:37173870-37173889 | Msa0404700:CDS | 50.0% | |
| AACACTACAGCTAGCAGGAG+AGG | + | chr3_2:37174558-37174577 | Msa0404700:CDS | 50.0% | |
| GTTTGGTAGAAGCCCGTGTC+AGG | + | chr3_2:37171504-37171523 | Msa0404700:intron | 55.0% | |
| AGCAACAAAGACTTCGCCGG+TGG | - | chr3_2:37171812-37171831 | None:intergenic | 55.0% | |
| TCCAGGTCTTGAGAGTGACG+AGG | + | chr3_2:37173539-37173558 | Msa0404700:intron | 55.0% | |
| TCCTCGTCACTCTCAAGACC+TGG | - | chr3_2:37173543-37173562 | None:intergenic | 55.0% | |
| ! | TCAGCCTCTCGTAAAGGCAC+TGG | + | chr3_2:37173606-37173625 | Msa0404700:CDS | 55.0% |
| TGCTGGTCCAGAACGTGTTC+AGG | + | chr3_2:37173635-37173654 | Msa0404700:CDS | 55.0% | |
| GCTGGTCCAGAACGTGTTCA+GGG | + | chr3_2:37173636-37173655 | Msa0404700:CDS | 55.0% | |
| !! | TGATGGTTTGGTGGAAGGGG+TGG | - | chr3_2:37174445-37174464 | None:intergenic | 55.0% |
| GCTAGCAGGAGAGGAAGCAA+CGG | + | chr3_2:37174567-37174586 | Msa0404700:CDS | 55.0% | |
| CCAGCACCCTGAACACGTTC+TGG | - | chr3_2:37173645-37173664 | None:intergenic | 60.0% | |
| CCAGAACGTGTTCAGGGTGC+TGG | + | chr3_2:37173642-37173661 | Msa0404700:CDS | 60.0% | |
| !! | ACGTGTTCAGGGTGCTGGAG+AGG | + | chr3_2:37173647-37173666 | Msa0404700:CDS | 60.0% |
| !! | CGTGTTCAGGGTGCTGGAGA+GGG | + | chr3_2:37173648-37173667 | Msa0404700:CDS | 60.0% |
| CAGCTCAGCAAGCAAGGGAG+AGG | + | chr3_2:37173863-37173882 | Msa0404700:CDS | 60.0% | |
| AGCAGGAGAGGAAGCAACGG+TGG | + | chr3_2:37174570-37174589 | Msa0404700:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 37170806 | 37175124 | 37170806 | ID=Msa0404700;Name=Msa0404700 |
| chr3_2 | mRNA | 37170806 | 37175124 | 37170806 | ID=Msa0404700-mRNA-1;Parent=Msa0404700;Name=Msa0404700-mRNA-1;_AED=0.03;_eAED=0.03;_QI=140|1|1|1|1|1|7|513|323 |
| chr3_2 | exon | 37170806 | 37171020 | 37170806 | ID=Msa0404700-mRNA-1:exon:7393;Parent=Msa0404700-mRNA-1 |
| chr3_2 | exon | 37171742 | 37171937 | 37171742 | ID=Msa0404700-mRNA-1:exon:7394;Parent=Msa0404700-mRNA-1 |
| chr3_2 | exon | 37172023 | 37172204 | 37172023 | ID=Msa0404700-mRNA-1:exon:7395;Parent=Msa0404700-mRNA-1 |
| chr3_2 | exon | 37172734 | 37172851 | 37172734 | ID=Msa0404700-mRNA-1:exon:7396;Parent=Msa0404700-mRNA-1 |
| chr3_2 | exon | 37173544 | 37173724 | 37173544 | ID=Msa0404700-mRNA-1:exon:7397;Parent=Msa0404700-mRNA-1 |
| chr3_2 | exon | 37173843 | 37173999 | 37173843 | ID=Msa0404700-mRNA-1:exon:7398;Parent=Msa0404700-mRNA-1 |
| chr3_2 | exon | 37174549 | 37175124 | 37174549 | ID=Msa0404700-mRNA-1:exon:7399;Parent=Msa0404700-mRNA-1 |
| chr3_2 | five_prime_UTR | 37170806 | 37170945 | 37170806 | ID=Msa0404700-mRNA-1:five_prime_utr;Parent=Msa0404700-mRNA-1 |
| chr3_2 | CDS | 37170946 | 37171020 | 37170946 | ID=Msa0404700-mRNA-1:cds;Parent=Msa0404700-mRNA-1 |
| chr3_2 | CDS | 37171742 | 37171937 | 37171742 | ID=Msa0404700-mRNA-1:cds;Parent=Msa0404700-mRNA-1 |
| chr3_2 | CDS | 37172023 | 37172204 | 37172023 | ID=Msa0404700-mRNA-1:cds;Parent=Msa0404700-mRNA-1 |
| chr3_2 | CDS | 37172734 | 37172851 | 37172734 | ID=Msa0404700-mRNA-1:cds;Parent=Msa0404700-mRNA-1 |
| chr3_2 | CDS | 37173544 | 37173724 | 37173544 | ID=Msa0404700-mRNA-1:cds;Parent=Msa0404700-mRNA-1 |
| chr3_2 | CDS | 37173843 | 37173999 | 37173843 | ID=Msa0404700-mRNA-1:cds;Parent=Msa0404700-mRNA-1 |
| chr3_2 | CDS | 37174549 | 37174611 | 37174549 | ID=Msa0404700-mRNA-1:cds;Parent=Msa0404700-mRNA-1 |
| chr3_2 | three_prime_UTR | 37174612 | 37175124 | 37174612 | ID=Msa0404700-mRNA-1:three_prime_utr;Parent=Msa0404700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
