Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101530 | XP_013461190.1 | 98.807 | 587 | 7 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101530 | sp|Q9SJ85|Y2474_ARATH | 72.744 | 554 | 138 | 3 | 16 | 564 | 26 | 571 | 0.0 | 834 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101530 | A0A072UZJ2 | 98.807 | 587 | 7 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1198 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1101530 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047810 | Msa1101530 | 0.869532 | 2.886533e-66 | -8.615850e-47 |
| Msa0229850 | Msa1101530 | 0.888622 | 5.012442e-73 | -8.615850e-47 |
| Msa0513450 | Msa1101530 | 0.826580 | 2.508888e-54 | -8.615850e-47 |
| Msa0526620 | Msa1101530 | 0.873323 | 1.607854e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101530 | MtrunA17_Chr3g0120891 | 97.956 | 587 | 6 | 1 | 1 | 587 | 1 | 581 | 0.0 | 1183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1101530 | AT2G04740.1 | 72.744 | 554 | 138 | 3 | 16 | 564 | 26 | 571 | 0.0 | 834 |
| Msa1101530 | AT2G04740.4 | 71.144 | 402 | 103 | 3 | 16 | 412 | 26 | 419 | 0.0 | 587 |
| Msa1101530 | AT2G04740.3 | 71.392 | 388 | 98 | 3 | 16 | 398 | 26 | 405 | 0.0 | 568 |
| Msa1101530 | AT2G04740.2 | 71.392 | 388 | 98 | 3 | 16 | 398 | 26 | 405 | 0.0 | 568 |
Find 136 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTCCTTGATCATTATTT+AGG | 0.129432 | 7_3:+32307826 | None:intergenic |
| ATAATTCATCTTTCCCTTCA+TGG | 0.209480 | 7_3:+32309592 | None:intergenic |
| TTGATGATTTACGTGATAAA+TGG | 0.228719 | 7_3:-32307800 | Msa1101530:CDS |
| TCGATGCTAGAATAACTTTA+TGG | 0.240325 | 7_3:+32309658 | None:intergenic |
| CCAATCACCGCTGTAATTTC+AGG | 0.266996 | 7_3:-32307621 | Msa1101530:CDS |
| GACTTAGACCCTTCCGATTT+CGG | 0.267048 | 7_3:-32312569 | Msa1101530:CDS |
| GGCAAATAATTCAAAATTAC+AGG | 0.300060 | 7_3:+32307944 | None:intergenic |
| TCCGGTGGATTTCAGTTTCC+TGG | 0.303043 | 7_3:-32312185 | Msa1101530:intron |
| CTTCAGGTGATGCCATTTCT+AGG | 0.304251 | 7_3:+32308753 | None:intergenic |
| TATGAGAATGGTCAAGATAA+TGG | 0.315888 | 7_3:-32309783 | Msa1101530:CDS |
| TTGCCGATACAAAAGAATTC+CGG | 0.318461 | 7_3:-32307926 | Msa1101530:CDS |
| ACAACTGTCCCGAGCATGCC+TGG | 0.328006 | 7_3:-32307855 | Msa1101530:CDS |
| AACCAATGGCAAAGCTCTTC+AGG | 0.332097 | 7_3:+32308737 | None:intergenic |
| GGCGAACAAACTGTAATTTC+AGG | 0.337080 | 7_3:-32307600 | Msa1101530:CDS |
| TGCTCCGAACACACGTTTGA+CGG | 0.338738 | 7_3:-32312344 | Msa1101530:CDS |
| TAGAGAGCAGATGCTAAGTT+AGG | 0.345187 | 7_3:-32307500 | Msa1101530:three_prime_UTR |
| CTTGGAAAACGTCGCCGTTT+GGG | 0.353575 | 7_3:+32312522 | None:intergenic |
| TTACTCTGCTCTTAATTTGA+AGG | 0.354172 | 7_3:-32312309 | Msa1101530:CDS |
| CTGAATAAAAGAAATGTATA+AGG | 0.355396 | 7_3:+32310054 | None:intergenic |
| TATGACCCTGTGAGCTTCAA+TGG | 0.355838 | 7_3:+32310184 | None:intergenic |
| ACATCAGCAAGATCATTTAG+AGG | 0.359931 | 7_3:+32309714 | None:intergenic |
| ATTTCCTTGATCATTATTTA+GGG | 0.362505 | 7_3:+32307827 | None:intergenic |
| GCAGGAAGCCTGTCTTCTTC+AGG | 0.365112 | 7_3:+32309849 | None:intergenic |
| TGTCCCGCCAATTCGCATTC+CGG | 0.366372 | 7_3:-32312203 | Msa1101530:CDS |
| CTGCTCTTAATTTGAAGGTT+AGG | 0.367208 | 7_3:-32312304 | Msa1101530:CDS |
| TGCCGATACAAAAGAATTCC+GGG | 0.375788 | 7_3:-32307925 | Msa1101530:CDS |
| CCTGAAATTACAGCGGTGAT+TGG | 0.383019 | 7_3:+32307621 | None:intergenic |
| GCTTGGAAAACGTCGCCGTT+TGG | 0.392528 | 7_3:+32312521 | None:intergenic |
| AGATAATGGAATTGATGAAT+TGG | 0.393017 | 7_3:-32309769 | Msa1101530:CDS |
| CAGGTACACCGATCGTTTGC+AGG | 0.393496 | 7_3:-32308953 | Msa1101530:CDS |
| AGAGATTGCTGTGGATGATA+TGG | 0.401698 | 7_3:-32310024 | Msa1101530:CDS |
| TCAAATTCCACTTATGAGAA+TGG | 0.404180 | 7_3:-32309795 | Msa1101530:CDS |
| ACGGTCGAGGTCGCCGGCGC+GGG | 0.409392 | 7_3:+32312496 | None:intergenic |
| ATCTTGACCATTCTCATAAG+TGG | 0.413032 | 7_3:+32309788 | None:intergenic |
| GGTCGCCGGCGCGGGAGGCT+TGG | 0.425592 | 7_3:+32312504 | None:intergenic |
| CAAGCGCCTAGAGATGCTTA+TGG | 0.430680 | 7_3:-32307721 | Msa1101530:CDS |
| TTGACTTTACCGCCACCATC+TGG | 0.432801 | 7_3:-32307894 | Msa1101530:CDS |
| TCAGCCACCGCACGCTTAAG+AGG | 0.432979 | 7_3:+32308791 | None:intergenic |
| GCAGGAAATAAATCCAGATC+AGG | 0.444091 | 7_3:-32308935 | Msa1101530:intron |
| TTGCTTGGAGTGCTTAAGTT+GGG | 0.445475 | 7_3:-32307477 | Msa1101530:three_prime_UTR |
| GGGGACTGATGTGCCGAAAT+CGG | 0.446957 | 7_3:+32312556 | None:intergenic |
| CTCTACTACGCTTGTCTCGC+CGG | 0.450922 | 7_3:-32312410 | Msa1101530:CDS |
| AAATCCACCGGAATGCGAAT+TGG | 0.454070 | 7_3:+32312196 | None:intergenic |
| CGTCAACGCACGTGACCAAT+GGG | 0.454729 | 7_3:-32312444 | Msa1101530:CDS |
| ACGTCAACGCACGTGACCAA+TGG | 0.460070 | 7_3:-32312445 | Msa1101530:CDS |
| CTCATAAGTGGAATTTGAAA+GGG | 0.462115 | 7_3:+32309800 | None:intergenic |
| AGGGAAGACCCAGGCATGCT+CGG | 0.478303 | 7_3:+32307846 | None:intergenic |
| GTTGCTTGGAGTGCTTAAGT+TGG | 0.479363 | 7_3:-32307478 | Msa1101530:three_prime_UTR |
| CTTGGTGCCACACCTAGAAA+TGG | 0.481090 | 7_3:-32308765 | Msa1101530:CDS |
| GTCACCGTCAAACGTGTGTT+CGG | 0.482387 | 7_3:+32312340 | None:intergenic |
| AGATGCTAAGTTAGGTTGCT+TGG | 0.482412 | 7_3:-32307492 | Msa1101530:three_prime_UTR |
| ACGGAGACGGTCGAGGTCGC+CGG | 0.484646 | 7_3:+32312490 | None:intergenic |
| CGTTAACGCCGCATTCAAGA+AGG | 0.487687 | 7_3:+32312465 | None:intergenic |
| AGCAAGACTCTCACGTATGA+AGG | 0.487920 | 7_3:-32309619 | Msa1101530:CDS |
| TCTCATAAGTGGAATTTGAA+AGG | 0.493040 | 7_3:+32309799 | None:intergenic |
| GAATTGATGAATTGGTATCT+AGG | 0.495038 | 7_3:-32309761 | Msa1101530:CDS |
| AACACACGTTTGACGGTGAC+CGG | 0.496734 | 7_3:-32312337 | Msa1101530:CDS |
| GCAGAGCATGAAAAGTCATC+AGG | 0.503518 | 7_3:-32307693 | Msa1101530:CDS |
| GCGTGCGGTGGCTGATGTCT+TGG | 0.504420 | 7_3:-32308783 | Msa1101530:CDS |
| AGGATTCTACGCAAGGCTGC+AGG | 0.504870 | 7_3:+32309831 | None:intergenic |
| TCTTCCCTAAATAATGATCA+AGG | 0.508410 | 7_3:-32307831 | Msa1101530:CDS |
| GCTCGTATGCTTCTCGAAAA+CGG | 0.515902 | 7_3:-32312374 | Msa1101530:CDS |
| CCCGCCAATTCGCATTCCGG+TGG | 0.516474 | 7_3:-32312200 | Msa1101530:CDS |
| GGGAAGACCCAGGCATGCTC+GGG | 0.516596 | 7_3:+32307847 | None:intergenic |
| CAACTGTCCCGAGCATGCCT+GGG | 0.516727 | 7_3:-32307854 | Msa1101530:CDS |
| CGTATGAAGGATTTCCATGA+AGG | 0.522102 | 7_3:-32309606 | Msa1101530:CDS |
| ATGACCCTGTGAGCTTCAAT+GGG | 0.523451 | 7_3:+32310185 | None:intergenic |
| TAATTCAAAATTACAGGCAA+TGG | 0.524676 | 7_3:+32307950 | None:intergenic |
| TGATGAATTGGTATCTAGGA+TGG | 0.526622 | 7_3:-32309757 | Msa1101530:CDS |
| GTCGAGGTCGCCGGCGCGGG+AGG | 0.526895 | 7_3:+32312499 | None:intergenic |
| CTAGAATAACTTTATGGCAG+CGG | 0.541146 | 7_3:+32309664 | None:intergenic |
| CAACAACCATAAGCATCTCT+AGG | 0.542190 | 7_3:+32307715 | None:intergenic |
| GGTGATGCCATTTCTAGGTG+TGG | 0.543342 | 7_3:+32308758 | None:intergenic |
| GAACTCTGCAACGGATTCAA+AGG | 0.544374 | 7_3:+32312248 | None:intergenic |
| ATTTATTTCCTGCAAACGAT+CGG | 0.548048 | 7_3:+32308945 | None:intergenic |
| TCCACCGGAATGCGAATTGG+CGG | 0.548080 | 7_3:+32312199 | None:intergenic |
| CACCTGAAGAGCTTTGCCAT+TGG | 0.550101 | 7_3:-32308739 | Msa1101530:CDS |
| CCACCGGAATGCGAATTGGC+GGG | 0.551808 | 7_3:+32312200 | None:intergenic |
| GAAGGTAACGGAGACGGTCG+AGG | 0.554738 | 7_3:+32312483 | None:intergenic |
| TGTATAAGGCTACAAAGTGC+AGG | 0.556046 | 7_3:+32310068 | None:intergenic |
| GAAGACCCATTGAAGCTCAC+AGG | 0.556477 | 7_3:-32310190 | Msa1101530:CDS |
| ATAGGTATTTCATCCACTCA+AGG | 0.558796 | 7_3:-32310260 | Msa1101530:intron |
| TGCGCATAATCTTAACAAGA+AGG | 0.558852 | 7_3:-32312619 | Msa1101530:five_prime_UTR |
| AGAGAGCGGTGGAGTCCCAT+TGG | 0.560808 | 7_3:+32312429 | None:intergenic |
| TATCCCTTCCTGAAGAAGAC+AGG | 0.561398 | 7_3:-32309857 | Msa1101530:CDS |
| ACTGATGTGCCGAAATCGGA+AGG | 0.562037 | 7_3:+32312560 | None:intergenic |
| ACGAGCGGCATCGAGGTGAC+CGG | 0.567999 | 7_3:+32312391 | None:intergenic |
| CATCTGCTCTCTATAAACTA+CGG | 0.577759 | 7_3:+32307510 | None:intergenic |
| CGGTGAAGTAAGATTTGCAC+GGG | 0.578959 | 7_3:-32310105 | Msa1101530:CDS |
| GACGGTCGAGGTCGCCGGCG+CGG | 0.580861 | 7_3:+32312495 | None:intergenic |
| GTAAAGTCAACAGCATTGCC+CGG | 0.581664 | 7_3:+32307907 | None:intergenic |
| CTATCTATATTATTATTACA+CGG | 0.582185 | 7_3:-32307409 | Msa1101530:three_prime_UTR |
| TAGGATGGATGCCATGCAGA+TGG | 0.591367 | 7_3:-32309742 | Msa1101530:CDS |
| TAGGTATTTCATCCACTCAA+GGG | 0.593239 | 7_3:-32310259 | Msa1101530:CDS |
| AATTTGAAAGGGCAGTCAGA+AGG | 0.595225 | 7_3:+32309811 | None:intergenic |
| ACCAGGAAACTGAAATCCAC+CGG | 0.595513 | 7_3:+32312184 | None:intergenic |
| AAGCCTGTCTTCTTCAGGAA+GGG | 0.600256 | 7_3:+32309854 | None:intergenic |
| AGTCAGAAGGATTCTACGCA+AGG | 0.604259 | 7_3:+32309824 | None:intergenic |
| ACAGGGTCATATTAAGTGCA+AGG | 0.612478 | 7_3:-32310172 | Msa1101530:CDS |
| AAGACCCATTGAAGCTCACA+GGG | 0.615492 | 7_3:-32310189 | Msa1101530:CDS |
| GAAGCCTGTCTTCTTCAGGA+AGG | 0.615749 | 7_3:+32309853 | None:intergenic |
| ATATAGACAATTCTCAAAAG+CGG | 0.616785 | 7_3:-32309896 | Msa1101530:CDS |
| CTCCGTTACCTTCTTGAATG+CGG | 0.621540 | 7_3:-32312473 | Msa1101530:CDS |
| CGAAGAGATGAGTCTCCAGA+TGG | 0.622590 | 7_3:+32307879 | None:intergenic |
| TAGAGGTTTAGCCATCTGCA+TGG | 0.622841 | 7_3:+32309731 | None:intergenic |
| ATCTCTCTCGTCAAGCTCAG+CGG | 0.623099 | 7_3:+32307764 | None:intergenic |
| CGTGTTCTTCAAGACAAGGA+AGG | 0.623560 | 7_3:+32309559 | None:intergenic |
| ATTCAAGAAGGTAACGGAGA+CGG | 0.624043 | 7_3:+32312477 | None:intergenic |
| GATGTTTCCTCTTAAGCGTG+CGG | 0.625855 | 7_3:-32308798 | Msa1101530:CDS |
| GTTTCCTCTTAAGCGTGCGG+TGG | 0.625968 | 7_3:-32308795 | Msa1101530:CDS |
| TGCAACGGATTCAAAGGAGG+AGG | 0.631815 | 7_3:+32312254 | None:intergenic |
| CTCTGCAACGGATTCAAAGG+AGG | 0.633098 | 7_3:+32312251 | None:intergenic |
| AGAGATGAGTCTCCAGATGG+TGG | 0.634349 | 7_3:+32307882 | None:intergenic |
| ACAAGCGTAGTAGAGAGCGG+TGG | 0.635729 | 7_3:+32312418 | None:intergenic |
| GTATGAAGGATTTCCATGAA+GGG | 0.635765 | 7_3:-32309605 | Msa1101530:CDS |
| TGAAGAACACGACATGAGTG+TGG | 0.636750 | 7_3:-32309547 | Msa1101530:CDS |
| GATGAGTCTCCAGATGGTGG+CGG | 0.638331 | 7_3:+32307885 | None:intergenic |
| GTGATTGGAGAGAAAGTCAA+GGG | 0.639852 | 7_3:+32307636 | None:intergenic |
| TCATTATTTAGGGAAGACCC+AGG | 0.639945 | 7_3:+32307837 | None:intergenic |
| CGCCGCATTCAAGAAGGTAA+CGG | 0.641866 | 7_3:+32312471 | None:intergenic |
| GTTGGAACTGAACCCTTGAG+TGG | 0.645789 | 7_3:+32310247 | None:intergenic |
| GAGACTGATTGGAAAGAGCG+CGG | 0.646559 | 7_3:-32310125 | Msa1101530:CDS |
| AGACAGATTAGAGATTGCTG+TGG | 0.649010 | 7_3:-32310033 | Msa1101530:CDS |
| GGTGATTGGAGAGAAAGTCA+AGG | 0.656518 | 7_3:+32307635 | None:intergenic |
| ATGTCGTGTTCTTCAAGACA+AGG | 0.664235 | 7_3:+32309555 | None:intergenic |
| CTGATGTGCCGAAATCGGAA+GGG | 0.674283 | 7_3:+32312561 | None:intergenic |
| TCACGAAGAGAACTCTGCAA+CGG | 0.676952 | 7_3:+32312239 | None:intergenic |
| TGTCTGCTAGCATTAACCAA+TGG | 0.682080 | 7_3:+32308723 | None:intergenic |
| ATGAGTTTCATCGACGACGG+CGG | 0.684567 | 7_3:-32312596 | Msa1101530:CDS |
| AGGATGAGTTTCATCGACGA+CGG | 0.689914 | 7_3:-32312599 | Msa1101530:CDS |
| GCGGTGAAGTAAGATTTGCA+CGG | 0.696641 | 7_3:-32310106 | Msa1101530:CDS |
| GAGACAAGCGTAGTAGAGAG+CGG | 0.707889 | 7_3:+32312415 | None:intergenic |
| TTGTTCGCCTGAAATTACAG+CGG | 0.710853 | 7_3:+32307614 | None:intergenic |
| TAAGAGCAGAGTAATGACAC+CGG | 0.716123 | 7_3:+32312318 | None:intergenic |
| GAAGCATACGAGCGGCATCG+AGG | 0.723315 | 7_3:+32312384 | None:intergenic |
| ATAAAGTTATTCTAGCATCG+AGG | 0.746606 | 7_3:-32309656 | Msa1101530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTGTTGATTT+AGG | - | chr7_3:32307973-32307992 | Msa1101530:CDS | 10.0% |
| !! | ATTATTAAAAGATATTTGAT+AGG | - | chr7_3:32308782-32308801 | Msa1101530:CDS | 10.0% |
| !!! | TTTATTTTATTATAGTATTC+AGG | + | chr7_3:32308975-32308994 | None:intergenic | 10.0% |
| !! | ATAAATACAACATTATTATT+TGG | + | chr7_3:32309742-32309761 | None:intergenic | 10.0% |
| !!! | AATTTTGAAATTGAAAATAT+CGG | - | chr7_3:32310584-32310603 | Msa1101530:intron | 10.0% |
| !! | GTATTATTATTCTATAAATT+TGG | - | chr7_3:32310674-32310693 | Msa1101530:intron | 10.0% |
| !!! | TTTCAAAATATTTTTTAAAC+AGG | - | chr7_3:32311201-32311220 | Msa1101530:intron | 10.0% |
| !! | AAAAAAAAAAAAAAAAAAGG+AGG | - | chr7_3:32311669-32311688 | Msa1101530:intron | 10.0% |
| !! | ATATTATTCATAGATGATTA+TGG | - | chr7_3:32308132-32308151 | Msa1101530:intron | 15.0% |
| !! | TTCTCAATGATAAATTAAAT+AGG | - | chr7_3:32308236-32308255 | Msa1101530:intron | 15.0% |
| !! | TCTCAATGATAAATTAAATA+GGG | - | chr7_3:32308237-32308256 | Msa1101530:intron | 15.0% |
| !! | AAAGTTCAATACTATAATAA+GGG | + | chr7_3:32309483-32309502 | None:intergenic | 15.0% |
| !! | AAAAGTTCAATACTATAATA+AGG | + | chr7_3:32309484-32309503 | None:intergenic | 15.0% |
| !! | AATAATGTTGTATTTATACA+TGG | - | chr7_3:32309745-32309764 | Msa1101530:CDS | 15.0% |
| !! | AAATCATTTAACTATAAATC+AGG | + | chr7_3:32310705-32310724 | None:intergenic | 15.0% |
| !!! | ACTTTTAAAAGAAATCTTAA+TGG | + | chr7_3:32311158-32311177 | None:intergenic | 15.0% |
| !!! | ATTAAGATTTCTTTTAAAAG+TGG | - | chr7_3:32311157-32311176 | Msa1101530:intron | 15.0% |
| !!! | AAATATTTCAATTTTGGTTT+AGG | + | chr7_3:32311608-32311627 | None:intergenic | 15.0% |
| !!! | ATTGGTAAATATTTCAATTT+TGG | + | chr7_3:32311614-32311633 | None:intergenic | 15.0% |
| !! | GACAAATAATTGTTTGTAAA+GGG | - | chr7_3:32308325-32308344 | Msa1101530:intron | 20.0% |
| !! | TTAAACTATGAAAAACTAGT+AGG | + | chr7_3:32308814-32308833 | None:intergenic | 20.0% |
| !!! | TATTATAGTATTCAGGTTTT+TGG | + | chr7_3:32308968-32308987 | None:intergenic | 20.0% |
| !!! | TTTGTTTTATTTCTCCTAAA+AGG | - | chr7_3:32309076-32309095 | Msa1101530:intron | 20.0% |
| !!! | TTGTTTTATTTCTCCTAAAA+GGG | - | chr7_3:32309077-32309096 | Msa1101530:intron | 20.0% |
| !! | AGAGAATTTAGATATATTGT+CGG | + | chr7_3:32309363-32309382 | None:intergenic | 20.0% |
| !!! | TCAAACTTTTTCTTGAAAAA+TGG | + | chr7_3:32309913-32309932 | None:intergenic | 20.0% |
| !! | CTGAATAAAAGAAATGTATA+AGG | + | chr7_3:32310005-32310024 | None:intergenic | 20.0% |
| !! | ATAGAATAATAATACAGTCA+CGG | + | chr7_3:32310669-32310688 | None:intergenic | 20.0% |
| !! | ACTTAAAATCTTTAGCAAAT+TGG | + | chr7_3:32310832-32310851 | None:intergenic | 20.0% |
| !! | TTATTCAATCTTTAGCAAAT+TGG | + | chr7_3:32310870-32310889 | None:intergenic | 20.0% |
| !! | TTTGAAAATCAGACAATAAA+AGG | + | chr7_3:32311188-32311207 | None:intergenic | 20.0% |
| !! | TAAAATAAGTGGAAATGAAA+AGG | + | chr7_3:32311468-32311487 | None:intergenic | 20.0% |
| !!! | TACTTATTAAAGGTTTTATC+TGG | - | chr7_3:32311544-32311563 | Msa1101530:intron | 20.0% |
| !! | ATTTCCTTGATCATTATTTA+GGG | + | chr7_3:32312232-32312251 | None:intergenic | 20.0% |
| !! | AAGAATTTGATTCTACCTTT+TGG | - | chr7_3:32307895-32307914 | Msa1101530:CDS | 25.0% |
| !! | ATTCTACCTTTTGGATTAAT+TGG | - | chr7_3:32307904-32307923 | Msa1101530:CDS | 25.0% |
| ! | CATAAACCAATTAATCCAAA+AGG | + | chr7_3:32307913-32307932 | None:intergenic | 25.0% |
| !! | ATTGGTTTATGAGAATGTTA+AGG | - | chr7_3:32307922-32307941 | Msa1101530:CDS | 25.0% |
| !! | AATGCACATTTTCATAACTT+AGG | + | chr7_3:32308103-32308122 | None:intergenic | 25.0% |
| ! | TTATTCATAGATGATTATGG+AGG | - | chr7_3:32308135-32308154 | Msa1101530:intron | 25.0% |
| !! | TTAGAAGCTCACTTTAATTT+AGG | - | chr7_3:32308193-32308212 | Msa1101530:intron | 25.0% |
| ! | CAATGATAAATTAAATAGGG+AGG | - | chr7_3:32308240-32308259 | Msa1101530:intron | 25.0% |
| !! | TAAATAGGGAGGATTTTATA+AGG | - | chr7_3:32308251-32308270 | Msa1101530:intron | 25.0% |
| ! | AAAGGAAATCATTAATGCAT+GGG | - | chr7_3:32308274-32308293 | Msa1101530:intron | 25.0% |
| !! | TGTAAAGGGTCTTATATTTA+CGG | - | chr7_3:32308303-32308322 | Msa1101530:intron | 25.0% |
| ! | GGACAAATAATTGTTTGTAA+AGG | - | chr7_3:32308324-32308343 | Msa1101530:intron | 25.0% |
| ! | GAGAATTTAGATATATTGTC+GGG | + | chr7_3:32309362-32309381 | None:intergenic | 25.0% |
| ! | TCTAATATTCTTACACAACA+AGG | - | chr7_3:32309559-32309578 | Msa1101530:CDS | 25.0% |
| ! | AACCATCAAATGATAAAACA+AGG | - | chr7_3:32309602-32309621 | Msa1101530:CDS | 25.0% |
| ! | ATATAGACAATTCTCAAAAG+CGG | - | chr7_3:32310160-32310179 | Msa1101530:CDS | 25.0% |
| !!! | AGATAATGGAATTGATGAAT+TGG | - | chr7_3:32310287-32310306 | Msa1101530:intron | 25.0% |
| !! | TTTGAAATTGAAAATATCGG+AGG | - | chr7_3:32310587-32310606 | Msa1101530:intron | 25.0% |
| ! | TTGAAATTGAAAATATCGGA+GGG | - | chr7_3:32310588-32310607 | Msa1101530:intron | 25.0% |
| ! | TAGAATAATAATACAGTCAC+GGG | + | chr7_3:32310668-32310687 | None:intergenic | 25.0% |
| !! | TTACATAAGATGATTTGCAA+TGG | - | chr7_3:32310744-32310763 | Msa1101530:intron | 25.0% |
| ! | CAGATTGAAAAACAAAAACT+AGG | + | chr7_3:32310782-32310801 | None:intergenic | 25.0% |
| !!! | CTAGTTTTTGTTTTTCAATC+TGG | - | chr7_3:32310780-32310799 | Msa1101530:intron | 25.0% |
| ! | AACAAACATGCATAAAACTA+AGG | + | chr7_3:32310914-32310933 | None:intergenic | 25.0% |
| ! | TTTATCCTGTATTTCTTTGT+TGG | - | chr7_3:32311078-32311097 | Msa1101530:intron | 25.0% |
| !!! | AATATTTTTTAAACAGGCTG+AGG | - | chr7_3:32311207-32311226 | Msa1101530:intron | 25.0% |
| ! | ACCTTTAATAAGTAACTACT+GGG | + | chr7_3:32311538-32311557 | None:intergenic | 25.0% |
| ! | AACCTTTAATAAGTAACTAC+TGG | + | chr7_3:32311539-32311558 | None:intergenic | 25.0% |
| !!! | TATTAAAGGTTTTATCTGGA+TGG | - | chr7_3:32311548-32311567 | Msa1101530:intron | 25.0% |
| ! | CCTTAATATACTTCTAACAA+TGG | + | chr7_3:32311976-32311995 | None:intergenic | 25.0% |
| !! | CCATTGTTAGAAGTATATTA+AGG | - | chr7_3:32311973-32311992 | Msa1101530:intron | 25.0% |
| ! | AGATTAAACAAGATATGATC+TGG | + | chr7_3:32312017-32312036 | None:intergenic | 25.0% |
| ! | TAATTCAAAATTACAGGCAA+TGG | + | chr7_3:32312109-32312128 | None:intergenic | 25.0% |
| ! | GGCAAATAATTCAAAATTAC+AGG | + | chr7_3:32312115-32312134 | None:intergenic | 25.0% |
| ! | GATTTCCTTGATCATTATTT+AGG | + | chr7_3:32312233-32312252 | None:intergenic | 25.0% |
| !! | TTGATGATTTACGTGATAAA+TGG | - | chr7_3:32312256-32312275 | Msa1101530:CDS | 25.0% |
| !!! | AAAAAGTGTTCAGAAATCTA+CGG | + | chr7_3:32312495-32312514 | None:intergenic | 25.0% |
| !!! | TAGATTTCTGAACACTTTTT+TGG | - | chr7_3:32312495-32312514 | Msa1101530:CDS | 25.0% |
| ! | TTACTCTGCTCTTAATTTGA+AGG | - | chr7_3:32307747-32307766 | Msa1101530:CDS | 30.0% |
| TTTATGAGAATGTTAAGGTG+TGG | - | chr7_3:32307927-32307946 | Msa1101530:CDS | 30.0% | |
| !! | GTGGAAGCTTTTTCTAATTA+AGG | - | chr7_3:32307946-32307965 | Msa1101530:CDS | 30.0% |
| GAAAGGAAATCATTAATGCA+TGG | - | chr7_3:32308273-32308292 | Msa1101530:intron | 30.0% | |
| ! | TTGTAAAGGGTCTTATGATT+AGG | - | chr7_3:32308338-32308357 | Msa1101530:intron | 30.0% |
| ! | TGTAAAGGGTCTTATGATTA+GGG | - | chr7_3:32308339-32308358 | Msa1101530:intron | 30.0% |
| TGAGAATTGAAATGACTGAT+TGG | - | chr7_3:32308434-32308453 | Msa1101530:intron | 30.0% | |
| ! | CATAAGTTTAGCTTCATAGT+TGG | - | chr7_3:32308620-32308639 | Msa1101530:intron | 30.0% |
| AAAAACCCACCAAAACAATA+TGG | - | chr7_3:32308893-32308912 | Msa1101530:intron | 30.0% | |
| AGCATTAGATATCTGATATC+AGG | + | chr7_3:32309323-32309342 | None:intergenic | 30.0% | |
| CATAAAACAATGAATCGAGT+AGG | - | chr7_3:32309529-32309548 | Msa1101530:CDS | 30.0% | |
| TTCTTACACAACAAGGAATT+AGG | - | chr7_3:32309566-32309585 | Msa1101530:CDS | 30.0% | |
| !!! | AGCCTTGTTTTATCATTTGA+TGG | + | chr7_3:32309607-32309626 | None:intergenic | 30.0% |
| TGTTGTATTTATACATGGTC+TGG | - | chr7_3:32309750-32309769 | Msa1101530:CDS | 30.0% | |
| GTTGTATTTATACATGGTCT+GGG | - | chr7_3:32309751-32309770 | Msa1101530:CDS | 30.0% | |
| ! | AGAAAAAGTTTGAGACTGAT+TGG | - | chr7_3:32309920-32309939 | Msa1101530:CDS | 30.0% |
| !!! | TCAAAAGCGGTTTATTTTAC+AGG | - | chr7_3:32310173-32310192 | Msa1101530:CDS | 30.0% |
| !!! | CAAAAGCGGTTTATTTTACA+GGG | - | chr7_3:32310174-32310193 | Msa1101530:CDS | 30.0% |
| CTCATAAGTGGAATTTGAAA+GGG | + | chr7_3:32310259-32310278 | None:intergenic | 30.0% | |
| TCTCATAAGTGGAATTTGAA+AGG | + | chr7_3:32310260-32310279 | None:intergenic | 30.0% | |
| TCAAATTCCACTTATGAGAA+TGG | - | chr7_3:32310261-32310280 | Msa1101530:intron | 30.0% | |
| TATGAGAATGGTCAAGATAA+TGG | - | chr7_3:32310273-32310292 | Msa1101530:intron | 30.0% | |
| GAATTGATGAATTGGTATCT+AGG | - | chr7_3:32310295-32310314 | Msa1101530:intron | 30.0% | |
| TCGATGCTAGAATAACTTTA+TGG | + | chr7_3:32310401-32310420 | None:intergenic | 30.0% | |
| ATAAAGTTATTCTAGCATCG+AGG | - | chr7_3:32310400-32310419 | Msa1101530:intron | 30.0% | |
| ATAATTCATCTTTCCCTTCA+TGG | + | chr7_3:32310467-32310486 | None:intergenic | 30.0% | |
| ATTTCAAAATTCCACAGTGA+AGG | + | chr7_3:32310575-32310594 | None:intergenic | 30.0% | |
| TAGTATGCCAATAATTACCA+CGG | - | chr7_3:32310614-32310633 | Msa1101530:intron | 30.0% | |
| TAAGTTACCGTGGTAATTAT+TGG | + | chr7_3:32310624-32310643 | None:intergenic | 30.0% | |
| ATGCATAAAACTAAGGCAAT+TGG | + | chr7_3:32310907-32310926 | None:intergenic | 30.0% | |
| ATAACAACACAAATATGACC+TGG | + | chr7_3:32310943-32310962 | None:intergenic | 30.0% | |
| ATTTATTTCCTGCAAACGAT+CGG | + | chr7_3:32311114-32311133 | None:intergenic | 30.0% | |
| TAAGATGAAGAAAGAGAGAT+TGG | + | chr7_3:32311376-32311395 | None:intergenic | 30.0% | |
| CTTTCTTCATCTTACATTGA+TGG | - | chr7_3:32311382-32311401 | Msa1101530:intron | 30.0% | |
| ! | ATAGGGATGTCTAAAATAAG+TGG | + | chr7_3:32311479-32311498 | None:intergenic | 30.0% |
| CTCTAGTAAGTAGTAACATA+GGG | + | chr7_3:32311496-32311515 | None:intergenic | 30.0% | |
| CCTTTAATAAGTAACTACTG+GGG | + | chr7_3:32311537-32311556 | None:intergenic | 30.0% | |
| GCATCTTAATTGTAGATCAT+TGG | + | chr7_3:32311632-32311651 | None:intergenic | 30.0% | |
| ! | TTTATGACTGCACATGTTTT+AGG | - | chr7_3:32311737-32311756 | Msa1101530:intron | 30.0% |
| TTGACTATTTGTTCATTTCC+AGG | - | chr7_3:32312046-32312065 | Msa1101530:intron | 30.0% | |
| TATTTGTTCATTTCCAGGTA+TGG | - | chr7_3:32312051-32312070 | Msa1101530:intron | 30.0% | |
| TCTTCCCTAAATAATGATCA+AGG | - | chr7_3:32312225-32312244 | Msa1101530:CDS | 30.0% | |
| TGCGCATAATCTTAACAAGA+AGG | - | chr7_3:32307437-32307456 | Msa1101530:three_prime_UTR | 35.0% | |
| !!! | CGTTTGGGACTTTTTTTAAG+GGG | + | chr7_3:32307522-32307541 | None:intergenic | 35.0% |
| !!! | CCGTTTGGGACTTTTTTTAA+GGG | + | chr7_3:32307523-32307542 | None:intergenic | 35.0% |
| CCCTTAAAAAAAGTCCCAAA+CGG | - | chr7_3:32307520-32307539 | Msa1101530:three_prime_UTR | 35.0% | |
| ! | CTGCTCTTAATTTGAAGGTT+AGG | - | chr7_3:32307752-32307771 | Msa1101530:CDS | 35.0% |
| GGTAGAATCAAATTCTTACC+AGG | + | chr7_3:32307892-32307911 | None:intergenic | 35.0% | |
| ACAAAAACTGAAACTCTCGT+AGG | + | chr7_3:32308062-32308081 | None:intergenic | 35.0% | |
| ! | AGGGAGGATTTTATAAGGAA+AGG | - | chr7_3:32308256-32308275 | Msa1101530:intron | 35.0% |
| ! | ATGCATGGGACATTTTGTAA+AGG | - | chr7_3:32308288-32308307 | Msa1101530:intron | 35.0% |
| ! | TGCATGGGACATTTTGTAAA+GGG | - | chr7_3:32308289-32308308 | Msa1101530:intron | 35.0% |
| TTGAAGGAGGATACAATGAA+GGG | - | chr7_3:32308379-32308398 | Msa1101530:intron | 35.0% | |
| CAACAGTCTGTGTAACATTT+AGG | + | chr7_3:32308472-32308491 | None:intergenic | 35.0% | |
| ! | ATGTTTTCAACGACAGAATG+CGG | - | chr7_3:32308854-32308873 | Msa1101530:intron | 35.0% |
| !!! | GTCTACCATATTGTTTTGGT+GGG | + | chr7_3:32308901-32308920 | None:intergenic | 35.0% |
| CACCAAAACAATATGGTAGA+CGG | - | chr7_3:32308900-32308919 | Msa1101530:intron | 35.0% | |
| ! | ATATCGTCTCACTAGGTTTT+GGG | - | chr7_3:32309048-32309067 | Msa1101530:intron | 35.0% |
| TTGACCAACATTAGTGATCT+AGG | + | chr7_3:32309131-32309150 | None:intergenic | 35.0% | |
| TGGGAGTTTCATTCCTAATT+AGG | + | chr7_3:32309217-32309236 | None:intergenic | 35.0% | |
| GAACATCACAAGGGATAAAA+GGG | - | chr7_3:32309262-32309281 | Msa1101530:intron | 35.0% | |
| TGATATCAGGTTCCTATTTG+AGG | + | chr7_3:32309310-32309329 | None:intergenic | 35.0% | |
| ATAGGTATTTCATCCACTCA+AGG | - | chr7_3:32309796-32309815 | Msa1101530:CDS | 35.0% | |
| TAGGTATTTCATCCACTCAA+GGG | - | chr7_3:32309797-32309816 | Msa1101530:CDS | 35.0% | |
| TACAGTAAAAACCACATCTG+GGG | + | chr7_3:32309842-32309861 | None:intergenic | 35.0% | |
| GTACAGTAAAAACCACATCT+GGG | + | chr7_3:32309843-32309862 | None:intergenic | 35.0% | |
| TGTACAGTAAAAACCACATC+TGG | + | chr7_3:32309844-32309863 | None:intergenic | 35.0% | |
| ! | GATGTGGTTTTTACTGTACA+AGG | - | chr7_3:32309844-32309863 | Msa1101530:CDS | 35.0% |
| ATCTTGACCATTCTCATAAG+TGG | + | chr7_3:32310271-32310290 | None:intergenic | 35.0% | |
| TGATGAATTGGTATCTAGGA+TGG | - | chr7_3:32310299-32310318 | Msa1101530:intron | 35.0% | |
| ACATCAGCAAGATCATTTAG+AGG | + | chr7_3:32310345-32310364 | None:intergenic | 35.0% | |
| CTAGAATAACTTTATGGCAG+CGG | + | chr7_3:32310395-32310414 | None:intergenic | 35.0% | |
| GTATGAAGGATTTCCATGAA+GGG | - | chr7_3:32310451-32310470 | Msa1101530:intron | 35.0% | |
| AAGATGATCTTAAGTTACCG+TGG | + | chr7_3:32310634-32310653 | None:intergenic | 35.0% | |
| TTTAGCAAATTGGTTGCGTT+TGG | + | chr7_3:32310822-32310841 | None:intergenic | 35.0% | |
| !!! | TGCATGTTTGTTTTTGTACC+AGG | - | chr7_3:32310922-32310941 | Msa1101530:intron | 35.0% |
| TCTCATAAACTTCAAGCAGA+AGG | + | chr7_3:32311000-32311019 | None:intergenic | 35.0% | |
| CTGAACCAACAAAGAAATAC+AGG | + | chr7_3:32311086-32311105 | None:intergenic | 35.0% | |
| !! | CTGTATTTCTTTGTTGGTTC+AGG | - | chr7_3:32311084-32311103 | Msa1101530:intron | 35.0% |
| GGATGTATAAAAACCTGATC+TGG | + | chr7_3:32311137-32311156 | None:intergenic | 35.0% | |
| GCTCTAGTAAGTAGTAACAT+AGG | + | chr7_3:32311497-32311516 | None:intergenic | 35.0% | |
| CCCCAGTAGTTACTTATTAA+AGG | - | chr7_3:32311534-32311553 | Msa1101530:intron | 35.0% | |
| ATGGTTGCTGAAATGTATTC+TGG | - | chr7_3:32311567-32311586 | Msa1101530:intron | 35.0% | |
| TCTCCTTAATTCATCTACCA+CGG | - | chr7_3:32311773-32311792 | Msa1101530:intron | 35.0% | |
| AAATGACCTTAGGGTTATGT+TGG | - | chr7_3:32311800-32311819 | Msa1101530:intron | 35.0% | |
| AATCTTCAAAACACCATACC+TGG | + | chr7_3:32312067-32312086 | None:intergenic | 35.0% | |
| !!! | GGTATGGTGTTTTGAAGATT+CGG | - | chr7_3:32312067-32312086 | Msa1101530:intron | 35.0% |
| !!! | GTATGGTGTTTTGAAGATTC+GGG | - | chr7_3:32312068-32312087 | Msa1101530:intron | 35.0% |
| TTGCCGATACAAAAGAATTC+CGG | - | chr7_3:32312130-32312149 | Msa1101530:intron | 35.0% | |
| CATCTGCTCTCTATAAACTA+CGG | + | chr7_3:32312549-32312568 | None:intergenic | 35.0% | |
| !!! | GCCGTTTGGGACTTTTTTTA+AGG | + | chr7_3:32307524-32307543 | None:intergenic | 40.0% |
| !! | ATTCAAGAAGGTAACGGAGA+CGG | + | chr7_3:32307582-32307601 | None:intergenic | 40.0% |
| TAAGAGCAGAGTAATGACAC+CGG | + | chr7_3:32307741-32307760 | None:intergenic | 40.0% | |
| GAGAGAGCTTATGAGAAAGT+TGG | - | chr7_3:32308166-32308185 | Msa1101530:intron | 40.0% | |
| ! | AAGGGTCTTATGATTAGGGA+TGG | - | chr7_3:32308343-32308362 | Msa1101530:intron | 40.0% |
| GTCTTATGATTAGGGATGGA+GGG | - | chr7_3:32308347-32308366 | Msa1101530:intron | 40.0% | |
| GTTGAAGGAGGATACAATGA+AGG | - | chr7_3:32308378-32308397 | Msa1101530:intron | 40.0% | |
| ATGTTACACAGACTGTTGCT+AGG | - | chr7_3:32308474-32308493 | Msa1101530:intron | 40.0% | |
| TGTTACACAGACTGTTGCTA+GGG | - | chr7_3:32308475-32308494 | Msa1101530:intron | 40.0% | |
| GTTGTGTTAATGTGTCGTGT+CGG | + | chr7_3:32308532-32308551 | None:intergenic | 40.0% | |
| !! | CGCTGCTGTAGTTTTTGAAA+TGG | + | chr7_3:32308596-32308615 | None:intergenic | 40.0% |
| TTCAAAAACTACAGCAGCGT+CGG | - | chr7_3:32308597-32308616 | Msa1101530:intron | 40.0% | |
| GTACTGTTTGTGCAATGGTA+AGG | - | chr7_3:32308710-32308729 | Msa1101530:intron | 40.0% | |
| !!! | CGTCTACCATATTGTTTTGG+TGG | + | chr7_3:32308902-32308921 | None:intergenic | 40.0% |
| ! | TGCCGTCTACCATATTGTTT+TGG | + | chr7_3:32308905-32308924 | None:intergenic | 40.0% |
| ! | GCAGTCTATGATGAAAGCAT+TGG | - | chr7_3:32308927-32308946 | Msa1101530:intron | 40.0% |
| TAACAAATCGAAGTTGCACC+AGG | - | chr7_3:32309022-32309041 | Msa1101530:intron | 40.0% | |
| ! | CATATCGTCTCACTAGGTTT+TGG | - | chr7_3:32309047-32309066 | Msa1101530:intron | 40.0% |
| ! | GCAATGAAGCAAACCCTTTT+AGG | + | chr7_3:32309093-32309112 | None:intergenic | 40.0% |
| ! | GGTTTGCTTCATTGCTTAAG+TGG | - | chr7_3:32309098-32309117 | Msa1101530:intron | 40.0% |
| TTGCTTCATTGCTTAAGTGG+AGG | - | chr7_3:32309101-32309120 | Msa1101530:intron | 40.0% | |
| CTCTCCTAGATCACTAATGT+TGG | - | chr7_3:32309124-32309143 | Msa1101530:intron | 40.0% | |
| AATTAGGCACCAGCCATATT+TGG | + | chr7_3:32309201-32309220 | None:intergenic | 40.0% | |
| AATATGGCTGGTGCCTAATT+AGG | - | chr7_3:32309201-32309220 | Msa1101530:intron | 40.0% | |
| AGGAATGAAACTCCCAGAAA+AGG | - | chr7_3:32309221-32309240 | Msa1101530:intron | 40.0% | |
| TGAAACTCCCAGAAAAGGAA+AGG | - | chr7_3:32309226-32309245 | Msa1101530:intron | 40.0% | |
| TCCCAGAAAAGGAAAGGATA+TGG | - | chr7_3:32309232-32309251 | Msa1101530:intron | 40.0% | |
| ! | CCCATATCCTTTCCTTTTCT+GGG | + | chr7_3:32309236-32309255 | None:intergenic | 40.0% |
| CCCAGAAAAGGAAAGGATAT+GGG | - | chr7_3:32309233-32309252 | Msa1101530:intron | 40.0% | |
| ! | ACCCATATCCTTTCCTTTTC+TGG | + | chr7_3:32309237-32309256 | None:intergenic | 40.0% |
| AAGGAAAGGATATGGGTATG+AGG | - | chr7_3:32309240-32309259 | Msa1101530:intron | 40.0% | |
| GGAACATCACAAGGGATAAA+AGG | - | chr7_3:32309261-32309280 | Msa1101530:intron | 40.0% | |
| ! | AAGGGATAAAAGGGTTTGCT+TGG | - | chr7_3:32309271-32309290 | Msa1101530:intron | 40.0% |
| ! | AGGGATAAAAGGGTTTGCTT+GGG | - | chr7_3:32309272-32309291 | Msa1101530:intron | 40.0% |
| TATCAGGTTCCTATTTGAGG+TGG | + | chr7_3:32309307-32309326 | None:intergenic | 40.0% | |
| ACAGTAAAAACCACATCTGG+GGG | + | chr7_3:32309841-32309860 | None:intergenic | 40.0% | |
| ACAGGGTCATATTAAGTGCA+AGG | - | chr7_3:32309884-32309903 | Msa1101530:CDS | 40.0% | |
| TGTATAAGGCTACAAAGTGC+AGG | + | chr7_3:32309991-32310010 | None:intergenic | 40.0% | |
| AGACAGATTAGAGATTGCTG+TGG | - | chr7_3:32310023-32310042 | Msa1101530:CDS | 40.0% | |
| AGAGATTGCTGTGGATGATA+TGG | - | chr7_3:32310032-32310051 | Msa1101530:CDS | 40.0% | |
| AATTTGAAAGGGCAGTCAGA+AGG | + | chr7_3:32310248-32310267 | None:intergenic | 40.0% | |
| CGTATGAAGGATTTCCATGA+AGG | - | chr7_3:32310450-32310469 | Msa1101530:intron | 40.0% | |
| ATGTCGTGTTCTTCAAGACA+AGG | + | chr7_3:32310504-32310523 | None:intergenic | 40.0% | |
| TAAGTCTCTTTCCTTCACTG+TGG | - | chr7_3:32310561-32310580 | Msa1101530:intron | 40.0% | |
| GCAGGAAATAAATCCAGATC+AGG | - | chr7_3:32311121-32311140 | Msa1101530:intron | 40.0% | |
| TGTCTGCTAGCATTAACCAA+TGG | + | chr7_3:32311336-32311355 | None:intergenic | 40.0% | |
| CATATGTAATTCACCACGAC+AGG | + | chr7_3:32311892-32311911 | None:intergenic | 40.0% | |
| TGCCGATACAAAAGAATTCC+GGG | - | chr7_3:32312131-32312150 | Msa1101530:intron | 40.0% | |
| ! | TGCCCGGAATTCTTTTGTAT+CGG | + | chr7_3:32312136-32312155 | None:intergenic | 40.0% |
| TCATTATTTAGGGAAGACCC+AGG | + | chr7_3:32312222-32312241 | None:intergenic | 40.0% | |
| CAACAACCATAAGCATCTCT+AGG | + | chr7_3:32312344-32312363 | None:intergenic | 40.0% | |
| GTGATTGGAGAGAAAGTCAA+GGG | + | chr7_3:32312423-32312442 | None:intergenic | 40.0% | |
| TTGTTCGCCTGAAATTACAG+CGG | + | chr7_3:32312445-32312464 | None:intergenic | 40.0% | |
| GGCGAACAAACTGTAATTTC+AGG | - | chr7_3:32312456-32312475 | Msa1101530:CDS | 40.0% | |
| TAGAGAGCAGATGCTAAGTT+AGG | - | chr7_3:32312556-32312575 | Msa1101530:CDS | 40.0% | |
| ! | AGATGCTAAGTTAGGTTGCT+TGG | - | chr7_3:32312564-32312583 | Msa1101530:CDS | 40.0% |
| ! | TTGCTTGGAGTGCTTAAGTT+GGG | - | chr7_3:32312579-32312598 | Msa1101530:CDS | 40.0% |
| AGGATGAGTTTCATCGACGA+CGG | - | chr7_3:32307457-32307476 | Msa1101530:three_prime_UTR | 45.0% | |
| GACTTAGACCCTTCCGATTT+CGG | - | chr7_3:32307487-32307506 | Msa1101530:three_prime_UTR | 45.0% | |
| CTCCGTTACCTTCTTGAATG+CGG | - | chr7_3:32307583-32307602 | Msa1101530:CDS | 45.0% | |
| !! | GTTTTCGAGAAGCATACGAG+CGG | + | chr7_3:32307683-32307702 | None:intergenic | 45.0% |
| GCTCGTATGCTTCTCGAAAA+CGG | - | chr7_3:32307682-32307701 | Msa1101530:CDS | 45.0% | |
| ! | GAACTCTGCAACGGATTCAA+AGG | + | chr7_3:32307811-32307830 | None:intergenic | 45.0% |
| TCACGAAGAGAACTCTGCAA+CGG | + | chr7_3:32307820-32307839 | None:intergenic | 45.0% | |
| AAATCCACCGGAATGCGAAT+TGG | + | chr7_3:32307863-32307882 | None:intergenic | 45.0% | |
| ACCAGGAAACTGAAATCCAC+CGG | + | chr7_3:32307875-32307894 | None:intergenic | 45.0% | |
| ! | GGTCTTATGATTAGGGATGG+AGG | - | chr7_3:32308346-32308365 | Msa1101530:intron | 45.0% |
| ! | TGGAGGGTGTAGAAAGTTGA+AGG | - | chr7_3:32308363-32308382 | Msa1101530:intron | 45.0% |
| AGGGTGTAGAAAGTTGAAGG+AGG | - | chr7_3:32308366-32308385 | Msa1101530:intron | 45.0% | |
| AAGGGCTTAGTTGTTGTCAG+TGG | - | chr7_3:32308397-32308416 | Msa1101530:intron | 45.0% | |
| AAGACATTGTCCTCCAAGCA+GGG | + | chr7_3:32308660-32308679 | None:intergenic | 45.0% | |
| AAAGACATTGTCCTCCAAGC+AGG | + | chr7_3:32308661-32308680 | None:intergenic | 45.0% | |
| TGCCTGCAAAACAAGACATG+AGG | - | chr7_3:32308681-32308700 | Msa1101530:intron | 45.0% | |
| GCCTGCAAAACAAGACATGA+GGG | - | chr7_3:32308682-32308701 | Msa1101530:intron | 45.0% | |
| CCTGCAAAACAAGACATGAG+GGG | - | chr7_3:32308683-32308702 | Msa1101530:intron | 45.0% | |
| CAAAACAAGACATGAGGGGT+GGG | - | chr7_3:32308687-32308706 | Msa1101530:intron | 45.0% | |
| AAAACAAGACATGAGGGGTG+GGG | - | chr7_3:32308688-32308707 | Msa1101530:intron | 45.0% | |
| TGGGTATGAGGAACATCACA+AGG | - | chr7_3:32309252-32309271 | Msa1101530:intron | 45.0% | |
| GGGTATGAGGAACATCACAA+GGG | - | chr7_3:32309253-32309272 | Msa1101530:intron | 45.0% | |
| !! | AAGAGTGCTCCACCTCAAAT+AGG | - | chr7_3:32309295-32309314 | Msa1101530:intron | 45.0% |
| AAGACCCATTGAAGCTCACA+GGG | - | chr7_3:32309867-32309886 | Msa1101530:CDS | 45.0% | |
| ATGACCCTGTGAGCTTCAAT+GGG | + | chr7_3:32309874-32309893 | None:intergenic | 45.0% | |
| TATGACCCTGTGAGCTTCAA+TGG | + | chr7_3:32309875-32309894 | None:intergenic | 45.0% | |
| GCGGTGAAGTAAGATTTGCA+CGG | - | chr7_3:32309950-32309969 | Msa1101530:CDS | 45.0% | |
| CGGTGAAGTAAGATTTGCAC+GGG | - | chr7_3:32309951-32309970 | Msa1101530:CDS | 45.0% | |
| TATCCCTTCCTGAAGAAGAC+AGG | - | chr7_3:32310199-32310218 | Msa1101530:CDS | 45.0% | |
| AAGCCTGTCTTCTTCAGGAA+GGG | + | chr7_3:32310205-32310224 | None:intergenic | 45.0% | |
| AGTCAGAAGGATTCTACGCA+AGG | + | chr7_3:32310235-32310254 | None:intergenic | 45.0% | |
| TAGAGGTTTAGCCATCTGCA+TGG | + | chr7_3:32310328-32310347 | None:intergenic | 45.0% | |
| AGCAAGACTCTCACGTATGA+AGG | - | chr7_3:32310437-32310456 | Msa1101530:intron | 45.0% | |
| CGTGTTCTTCAAGACAAGGA+AGG | + | chr7_3:32310500-32310519 | None:intergenic | 45.0% | |
| TGAAGAACACGACATGAGTG+TGG | - | chr7_3:32310509-32310528 | Msa1101530:intron | 45.0% | |
| GATGTTTCCTCTTAAGCGTG+CGG | - | chr7_3:32311258-32311277 | Msa1101530:intron | 45.0% | |
| ! | CTTCAGGTGATGCCATTTCT+AGG | + | chr7_3:32311306-32311325 | None:intergenic | 45.0% |
| AACCAATGGCAAAGCTCTTC+AGG | + | chr7_3:32311322-32311341 | None:intergenic | 45.0% | |
| GAGCCGTGGTAGATGAATTA+AGG | + | chr7_3:32311779-32311798 | None:intergenic | 45.0% | |
| CACGGCTCAAAATGACCTTA+GGG | - | chr7_3:32311791-32311810 | Msa1101530:intron | 45.0% | |
| CCTCTTCCAACATAACCCTA+AGG | + | chr7_3:32311809-32311828 | None:intergenic | 45.0% | |
| CCTTAGGGTTATGTTGGAAG+AGG | - | chr7_3:32311806-32311825 | Msa1101530:intron | 45.0% | |
| TACTCAGCAGTTAGGCAGTT+AGG | + | chr7_3:32311863-32311882 | None:intergenic | 45.0% | |
| GGCTACAATACTCAGCAGTT+AGG | + | chr7_3:32311871-32311890 | None:intergenic | 45.0% | |
| GTAAAGTCAACAGCATTGCC+CGG | + | chr7_3:32312152-32312171 | None:intergenic | 45.0% | |
| GCAGAGCATGAAAAGTCATC+AGG | - | chr7_3:32312363-32312382 | Msa1101530:CDS | 45.0% | |
| GGTGATTGGAGAGAAAGTCA+AGG | + | chr7_3:32312424-32312443 | None:intergenic | 45.0% | |
| CCTGAAATTACAGCGGTGAT+TGG | + | chr7_3:32312438-32312457 | None:intergenic | 45.0% | |
| CCAATCACCGCTGTAATTTC+AGG | - | chr7_3:32312435-32312454 | Msa1101530:CDS | 45.0% | |
| ! | GTTGCTTGGAGTGCTTAAGT+TGG | - | chr7_3:32312578-32312597 | Msa1101530:CDS | 45.0% |
| !! | AATATTTATTATATTTGAAT+AGG | - | chr7_3:32309778-32309797 | Msa1101530:CDS | 5.0% |
| !! | GAAAAAAAAAAAAAAAAAAA+AGG | - | chr7_3:32311666-32311685 | Msa1101530:intron | 5.0% |
| ATGAGTTTCATCGACGACGG+CGG | - | chr7_3:32307460-32307479 | Msa1101530:three_prime_UTR | 50.0% | |
| CTGATGTGCCGAAATCGGAA+GGG | + | chr7_3:32307498-32307517 | None:intergenic | 50.0% | |
| ACTGATGTGCCGAAATCGGA+AGG | + | chr7_3:32307499-32307518 | None:intergenic | 50.0% | |
| CTTGGAAAACGTCGCCGTTT+GGG | + | chr7_3:32307537-32307556 | None:intergenic | 50.0% | |
| CGCCGCATTCAAGAAGGTAA+CGG | + | chr7_3:32307588-32307607 | None:intergenic | 50.0% | |
| CGTTAACGCCGCATTCAAGA+AGG | + | chr7_3:32307594-32307613 | None:intergenic | 50.0% | |
| GAGACAAGCGTAGTAGAGAG+CGG | + | chr7_3:32307644-32307663 | None:intergenic | 50.0% | |
| TGCTCCGAACACACGTTTGA+CGG | - | chr7_3:32307712-32307731 | Msa1101530:CDS | 50.0% | |
| GTCACCGTCAAACGTGTGTT+CGG | + | chr7_3:32307719-32307738 | None:intergenic | 50.0% | |
| AACACACGTTTGACGGTGAC+CGG | - | chr7_3:32307719-32307738 | Msa1101530:CDS | 50.0% | |
| ! | TGCAACGGATTCAAAGGAGG+AGG | + | chr7_3:32307805-32307824 | None:intergenic | 50.0% |
| ! | CTCTGCAACGGATTCAAAGG+AGG | + | chr7_3:32307808-32307827 | None:intergenic | 50.0% |
| ! | TCCGGTGGATTTCAGTTTCC+TGG | - | chr7_3:32307871-32307890 | Msa1101530:CDS | 50.0% |
| ! | TGTTAATGTGTCGTGTCGGC+TGG | + | chr7_3:32308528-32308547 | None:intergenic | 50.0% |
| GTGCTTAATCTTCCCCTGCT+TGG | - | chr7_3:32308644-32308663 | Msa1101530:intron | 50.0% | |
| CTTAATCTTCCCCTGCTTGG+AGG | - | chr7_3:32308647-32308666 | Msa1101530:intron | 50.0% | |
| AGACATTGTCCTCCAAGCAG+GGG | + | chr7_3:32308659-32308678 | None:intergenic | 50.0% | |
| !!! | CCCCTCATGTCTTGTTTTGC+AGG | + | chr7_3:32308686-32308705 | None:intergenic | 50.0% |
| GCAAAACAAGACATGAGGGG+TGG | - | chr7_3:32308686-32308705 | Msa1101530:intron | 50.0% | |
| !! | GTGGGGTACTGTTTGTGCAA+TGG | - | chr7_3:32308705-32308724 | Msa1101530:intron | 50.0% |
| CTAGTGAGACGATATGTGCC+TGG | + | chr7_3:32309043-32309062 | None:intergenic | 50.0% | |
| CAGGCACATATCGTCTCACT+AGG | - | chr7_3:32309041-32309060 | Msa1101530:intron | 50.0% | |
| !!! | TCGTCTCACTAGGTTTTGGG+TGG | - | chr7_3:32309051-32309070 | Msa1101530:intron | 50.0% |
| !!! | CGTCTCACTAGGTTTTGGGT+GGG | - | chr7_3:32309052-32309071 | Msa1101530:intron | 50.0% |
| TACCACGGTCGTGCCAAATA+TGG | - | chr7_3:32309185-32309204 | Msa1101530:intron | 50.0% | |
| ACACACACACACACGTGAGA+TGG | - | chr7_3:32309685-32309704 | Msa1101530:CDS | 50.0% | |
| CACACACACACACGTGAGAT+GGG | - | chr7_3:32309686-32309705 | Msa1101530:CDS | 50.0% | |
| ACACACACACACGTGAGATG+GGG | - | chr7_3:32309687-32309706 | Msa1101530:CDS | 50.0% | |
| GTTGGAACTGAACCCTTGAG+TGG | + | chr7_3:32309812-32309831 | None:intergenic | 50.0% | |
| CACATCTGGGGGAAAGTAGT+TGG | + | chr7_3:32309830-32309849 | None:intergenic | 50.0% | |
| CAACTACTTTCCCCCAGATG+TGG | - | chr7_3:32309828-32309847 | Msa1101530:CDS | 50.0% | |
| GAAGACCCATTGAAGCTCAC+AGG | - | chr7_3:32309866-32309885 | Msa1101530:CDS | 50.0% | |
| GAGACTGATTGGAAAGAGCG+CGG | - | chr7_3:32309931-32309950 | Msa1101530:CDS | 50.0% | |
| GAAGCCTGTCTTCTTCAGGA+AGG | + | chr7_3:32310206-32310225 | None:intergenic | 50.0% | |
| TAGGATGGATGCCATGCAGA+TGG | - | chr7_3:32310314-32310333 | Msa1101530:intron | 50.0% | |
| !! | CTTGGTGCCACACCTAGAAA+TGG | - | chr7_3:32311291-32311310 | Msa1101530:intron | 50.0% |
| ! | GGTGATGCCATTTCTAGGTG+TGG | + | chr7_3:32311301-32311320 | None:intergenic | 50.0% |
| CACCTGAAGAGCTTTGCCAT+TGG | - | chr7_3:32311317-32311336 | Msa1101530:intron | 50.0% | |
| !! | CCTAAGGTCATTTTGAGCCG+TGG | + | chr7_3:32311793-32311812 | None:intergenic | 50.0% |
| CCACGGCTCAAAATGACCTT+AGG | - | chr7_3:32311790-32311809 | Msa1101530:intron | 50.0% | |
| ! | CTGAGTATTGTAGCCTGTCG+TGG | - | chr7_3:32311876-32311895 | Msa1101530:intron | 50.0% |
| TTGACTTTACCGCCACCATC+TGG | - | chr7_3:32312162-32312181 | Msa1101530:intron | 50.0% | |
| AGAGATGAGTCTCCAGATGG+TGG | + | chr7_3:32312177-32312196 | None:intergenic | 50.0% | |
| CGAAGAGATGAGTCTCCAGA+TGG | + | chr7_3:32312180-32312199 | None:intergenic | 50.0% | |
| ATCTCTCTCGTCAAGCTCAG+CGG | + | chr7_3:32312295-32312314 | None:intergenic | 50.0% | |
| CAAGCGCCTAGAGATGCTTA+TGG | - | chr7_3:32312335-32312354 | Msa1101530:CDS | 50.0% | |
| GGGGACTGATGTGCCGAAAT+CGG | + | chr7_3:32307503-32307522 | None:intergenic | 55.0% | |
| GCTTGGAAAACGTCGCCGTT+TGG | + | chr7_3:32307538-32307557 | None:intergenic | 55.0% | |
| ACGTCAACGCACGTGACCAA+TGG | - | chr7_3:32307611-32307630 | Msa1101530:CDS | 55.0% | |
| CGTCAACGCACGTGACCAAT+GGG | - | chr7_3:32307612-32307631 | Msa1101530:CDS | 55.0% | |
| ACAAGCGTAGTAGAGAGCGG+TGG | + | chr7_3:32307641-32307660 | None:intergenic | 55.0% | |
| CTCTACTACGCTTGTCTCGC+CGG | - | chr7_3:32307646-32307665 | Msa1101530:CDS | 55.0% | |
| TGTCCCGCCAATTCGCATTC+CGG | - | chr7_3:32307853-32307872 | Msa1101530:CDS | 55.0% | |
| TCCACCGGAATGCGAATTGG+CGG | + | chr7_3:32307860-32307879 | None:intergenic | 55.0% | |
| GTGCCTGACGAGTCTTACCA+CGG | - | chr7_3:32309170-32309189 | Msa1101530:intron | 55.0% | |
| AGCCATATTTGGCACGACCG+TGG | + | chr7_3:32309190-32309209 | None:intergenic | 55.0% | |
| ACGGTCGTGCCAAATATGGC+TGG | - | chr7_3:32309189-32309208 | Msa1101530:intron | 55.0% | |
| GCAGGAAGCCTGTCTTCTTC+AGG | + | chr7_3:32310210-32310229 | None:intergenic | 55.0% | |
| AGGATTCTACGCAAGGCTGC+AGG | + | chr7_3:32310228-32310247 | None:intergenic | 55.0% | |
| CAGGTACACCGATCGTTTGC+AGG | - | chr7_3:32311103-32311122 | Msa1101530:intron | 55.0% | |
| GTTTCCTCTTAAGCGTGCGG+TGG | - | chr7_3:32311261-32311280 | Msa1101530:intron | 55.0% | |
| ! | GATGAGTCTCCAGATGGTGG+CGG | + | chr7_3:32312174-32312193 | None:intergenic | 55.0% |
| !! | GAAGGTAACGGAGACGGTCG+AGG | + | chr7_3:32307576-32307595 | None:intergenic | 60.0% |
| AGAGAGCGGTGGAGTCCCAT+TGG | + | chr7_3:32307630-32307649 | None:intergenic | 60.0% | |
| GAAGCATACGAGCGGCATCG+AGG | + | chr7_3:32307675-32307694 | None:intergenic | 60.0% | |
| CCACCGGAATGCGAATTGGC+GGG | + | chr7_3:32307859-32307878 | None:intergenic | 60.0% | |
| CGACCGTGGTAAGACTCGTC+AGG | + | chr7_3:32309176-32309195 | None:intergenic | 60.0% | |
| TCAGCCACCGCACGCTTAAG+AGG | + | chr7_3:32311268-32311287 | None:intergenic | 60.0% | |
| ACAACTGTCCCGAGCATGCC+TGG | - | chr7_3:32312201-32312220 | Msa1101530:CDS | 60.0% | |
| CAACTGTCCCGAGCATGCCT+GGG | - | chr7_3:32312202-32312221 | Msa1101530:CDS | 60.0% | |
| AGGGAAGACCCAGGCATGCT+CGG | + | chr7_3:32312213-32312232 | None:intergenic | 60.0% | |
| ! | GTTTTCCAAGCCTCCCGCGC+CGG | - | chr7_3:32307547-32307566 | Msa1101530:three_prime_UTR | 65.0% |
| ! | ACGAGCGGCATCGAGGTGAC+CGG | + | chr7_3:32307668-32307687 | None:intergenic | 65.0% |
| CCCGCCAATTCGCATTCCGG+TGG | - | chr7_3:32307856-32307875 | Msa1101530:CDS | 65.0% | |
| GCGTGCGGTGGCTGATGTCT+TGG | - | chr7_3:32311273-32311292 | Msa1101530:intron | 65.0% | |
| GGGAAGACCCAGGCATGCTC+GGG | + | chr7_3:32312212-32312231 | None:intergenic | 65.0% | |
| ACGGAGACGGTCGAGGTCGC+CGG | + | chr7_3:32307569-32307588 | None:intergenic | 70.0% | |
| ! | ACGGTCGAGGTCGCCGGCGC+GGG | + | chr7_3:32307563-32307582 | None:intergenic | 80.0% |
| ! | GACGGTCGAGGTCGCCGGCG+CGG | + | chr7_3:32307564-32307583 | None:intergenic | 80.0% |
| ! | GGTCGCCGGCGCGGGAGGCT+TGG | + | chr7_3:32307555-32307574 | None:intergenic | 85.0% |
| ! | GTCGAGGTCGCCGGCGCGGG+AGG | + | chr7_3:32307560-32307579 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 32307409 | 32312669 | 32307409 | ID=Msa1101530;Name=Msa1101530 |
| chr7_3 | mRNA | 32307409 | 32312669 | 32307409 | ID=Msa1101530-mRNA-1;Parent=Msa1101530;Name=Msa1101530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=51|1|1|1|1|1|5|172|597 |
| chr7_3 | exon | 32307409 | 32308010 | 32307409 | ID=Msa1101530-mRNA-1:exon:6990;Parent=Msa1101530-mRNA-1 |
| chr7_3 | exon | 32308722 | 32308855 | 32308722 | ID=Msa1101530-mRNA-1:exon:6989;Parent=Msa1101530-mRNA-1 |
| chr7_3 | exon | 32308936 | 32308972 | 32308936 | ID=Msa1101530-mRNA-1:exon:6988;Parent=Msa1101530-mRNA-1 |
| chr7_3 | exon | 32309519 | 32310278 | 32309519 | ID=Msa1101530-mRNA-1:exon:6987;Parent=Msa1101530-mRNA-1 |
| chr7_3 | exon | 32312186 | 32312669 | 32312186 | ID=Msa1101530-mRNA-1:exon:6986;Parent=Msa1101530-mRNA-1 |
| chr7_3 | five_prime_UTR | 32312619 | 32312669 | 32312619 | ID=Msa1101530-mRNA-1:five_prime_utr;Parent=Msa1101530-mRNA-1 |
| chr7_3 | CDS | 32312186 | 32312618 | 32312186 | ID=Msa1101530-mRNA-1:cds;Parent=Msa1101530-mRNA-1 |
| chr7_3 | CDS | 32309519 | 32310278 | 32309519 | ID=Msa1101530-mRNA-1:cds;Parent=Msa1101530-mRNA-1 |
| chr7_3 | CDS | 32308936 | 32308972 | 32308936 | ID=Msa1101530-mRNA-1:cds;Parent=Msa1101530-mRNA-1 |
| chr7_3 | CDS | 32308722 | 32308855 | 32308722 | ID=Msa1101530-mRNA-1:cds;Parent=Msa1101530-mRNA-1 |
| chr7_3 | CDS | 32307581 | 32308010 | 32307581 | ID=Msa1101530-mRNA-1:cds;Parent=Msa1101530-mRNA-1 |
| chr7_3 | three_prime_UTR | 32307409 | 32307580 | 32307409 | ID=Msa1101530-mRNA-1:three_prime_utr;Parent=Msa1101530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
