Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106770 | KEH22973.1 | 92.830 | 265 | 19 | 0 | 1 | 265 | 1 | 265 | 0.0 | 517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106770 | sp|P50162|TRN1_DATST | 56.877 | 269 | 112 | 2 | 1 | 265 | 1 | 269 | 2.57e-110 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106770 | A0A072U1F3 | 92.830 | 265 | 19 | 0 | 1 | 265 | 1 | 265 | 0.0 | 517 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0819380 | Msa1106770 | 0.831733 | 1.411673e-55 | -8.615850e-47 |
| Msa1022610 | Msa1106770 | 0.978830 | 1.183008e-146 | -8.615850e-47 |
| Msa1061470 | Msa1106770 | 0.927967 | 5.610644e-92 | -8.615850e-47 |
| Msa1106770 | Msa1150190 | 0.869157 | 3.822077e-66 | -8.615850e-47 |
| Msa0859490 | Msa1106770 | 0.801355 | 9.363975e-49 | -8.615850e-47 |
| Msa0859520 | Msa1106770 | 0.805269 | 1.447953e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106770 | MtrunA17_Chr7g0239451 | 88.346 | 266 | 30 | 1 | 1 | 265 | 1 | 266 | 1.68e-180 | 496 |
| Msa1106770 | MtrunA17_Chr7g0239511 | 75.472 | 265 | 64 | 1 | 1 | 264 | 1 | 265 | 8.68e-149 | 416 |
| Msa1106770 | MtrunA17_Chr7g0239501 | 75.094 | 265 | 65 | 1 | 1 | 264 | 1 | 265 | 1.20e-144 | 405 |
| Msa1106770 | MtrunA17_Chr7g0239461 | 75.472 | 265 | 16 | 1 | 1 | 265 | 1 | 216 | 3.90e-141 | 395 |
| Msa1106770 | MtrunA17_Chr7g0239491 | 67.925 | 265 | 84 | 1 | 1 | 265 | 1 | 264 | 1.11e-137 | 388 |
| Msa1106770 | MtrunA17_Chr7g0239481 | 70.833 | 264 | 75 | 2 | 1 | 263 | 1 | 263 | 3.08e-137 | 387 |
| Msa1106770 | MtrunA17_Chr4g0032141 | 58.661 | 254 | 102 | 1 | 11 | 264 | 51 | 301 | 4.10e-111 | 322 |
| Msa1106770 | MtrunA17_Chr3g0112151 | 59.316 | 263 | 102 | 2 | 3 | 264 | 73 | 331 | 8.64e-108 | 315 |
| Msa1106770 | MtrunA17_Chr3g0112261 | 55.814 | 258 | 111 | 1 | 7 | 264 | 10 | 264 | 2.10e-103 | 301 |
| Msa1106770 | MtrunA17_Chr3g0112271 | 55.894 | 263 | 113 | 1 | 2 | 264 | 3 | 262 | 7.23e-102 | 298 |
| Msa1106770 | MtrunA17_Chr3g0112171 | 57.831 | 249 | 102 | 1 | 16 | 264 | 15 | 260 | 8.98e-102 | 297 |
| Msa1106770 | MtrunA17_Chr3g0112141 | 58.000 | 250 | 102 | 1 | 16 | 265 | 17 | 263 | 5.06e-100 | 293 |
| Msa1106770 | MtrunA17_Chr4g0032181 | 54.506 | 233 | 103 | 1 | 32 | 264 | 17 | 246 | 3.11e-91 | 270 |
| Msa1106770 | MtrunA17_Chr4g0075531 | 34.118 | 255 | 158 | 6 | 12 | 265 | 5 | 250 | 6.27e-34 | 123 |
| Msa1106770 | MtrunA17_Chr4g0074511 | 33.203 | 256 | 156 | 6 | 16 | 262 | 40 | 289 | 1.63e-27 | 107 |
| Msa1106770 | MtrunA17_Chr7g0272961 | 31.641 | 256 | 159 | 8 | 16 | 262 | 40 | 288 | 6.51e-27 | 105 |
| Msa1106770 | MtrunA17_Chr7g0259521 | 31.102 | 254 | 164 | 5 | 16 | 263 | 6 | 254 | 1.22e-26 | 104 |
| Msa1106770 | MtrunA17_Chr1g0191751 | 31.250 | 256 | 160 | 7 | 16 | 262 | 101 | 349 | 2.00e-26 | 105 |
| Msa1106770 | MtrunA17_Chr3g0122901 | 30.894 | 246 | 156 | 5 | 22 | 262 | 81 | 317 | 3.47e-26 | 104 |
| Msa1106770 | MtrunA17_Chr0c30g0494101 | 33.463 | 257 | 152 | 8 | 16 | 262 | 40 | 287 | 6.91e-26 | 103 |
| Msa1106770 | MtrunA17_Chr8g0357481 | 29.658 | 263 | 157 | 8 | 16 | 262 | 14 | 264 | 9.18e-25 | 100 |
| Msa1106770 | MtrunA17_Chr7g0259531 | 29.845 | 258 | 162 | 5 | 16 | 263 | 11 | 259 | 2.50e-24 | 98.2 |
| Msa1106770 | MtrunA17_Chr1g0182511 | 31.698 | 265 | 149 | 8 | 16 | 263 | 14 | 263 | 4.51e-24 | 97.8 |
| Msa1106770 | MtrunA17_Chr3g0112321 | 47.059 | 102 | 35 | 3 | 148 | 246 | 2 | 87 | 8.49e-21 | 84.3 |
| Msa1106770 | MtrunA17_Chr7g0249571 | 28.641 | 206 | 141 | 5 | 4 | 204 | 26 | 230 | 2.13e-19 | 85.9 |
| Msa1106770 | MtrunA17_Chr4g0028911 | 26.459 | 257 | 177 | 7 | 16 | 264 | 11 | 263 | 1.17e-18 | 83.2 |
| Msa1106770 | MtrunA17_Chr4g0028921 | 26.848 | 257 | 176 | 7 | 16 | 264 | 11 | 263 | 2.86e-18 | 82.0 |
| Msa1106770 | MtrunA17_Chr4g0026001 | 30.769 | 273 | 165 | 11 | 1 | 264 | 1 | 258 | 4.46e-18 | 81.6 |
| Msa1106770 | MtrunA17_Chr7g0244061 | 29.268 | 287 | 170 | 10 | 3 | 265 | 18 | 295 | 6.92e-18 | 81.6 |
| Msa1106770 | MtrunA17_Chr8g0355281 | 30.435 | 207 | 126 | 6 | 22 | 215 | 75 | 276 | 6.58e-17 | 79.3 |
| Msa1106770 | MtrunA17_Chr6g0459351 | 28.889 | 270 | 176 | 9 | 1 | 263 | 1 | 261 | 1.16e-16 | 77.4 |
| Msa1106770 | MtrunA17_Chr4g0044131 | 26.820 | 261 | 168 | 9 | 16 | 265 | 8 | 256 | 4.07e-16 | 76.3 |
| Msa1106770 | MtrunA17_Chr6g0459281 | 27.778 | 270 | 179 | 9 | 1 | 263 | 1 | 261 | 9.09e-16 | 75.1 |
| Msa1106770 | MtrunA17_Chr4g0025971 | 29.020 | 255 | 165 | 9 | 16 | 264 | 14 | 258 | 9.70e-16 | 75.1 |
| Msa1106770 | MtrunA17_Chr6g0459261 | 28.261 | 276 | 170 | 10 | 1 | 263 | 13 | 273 | 2.74e-15 | 73.9 |
| Msa1106770 | MtrunA17_Chr4g0025981 | 27.668 | 253 | 161 | 8 | 18 | 261 | 43 | 282 | 7.29e-15 | 73.2 |
| Msa1106770 | MtrunA17_Chr7g0266981 | 29.434 | 265 | 172 | 8 | 7 | 264 | 4 | 260 | 2.84e-14 | 70.9 |
| Msa1106770 | MtrunA17_Chr4g0044111 | 29.434 | 265 | 172 | 8 | 7 | 264 | 4 | 260 | 3.16e-14 | 70.9 |
| Msa1106770 | MtrunA17_Chr7g0252031 | 27.740 | 292 | 171 | 12 | 3 | 265 | 8 | 288 | 3.60e-13 | 68.2 |
| Msa1106770 | MtrunA17_Chr7g0268591 | 27.757 | 263 | 167 | 8 | 16 | 265 | 33 | 285 | 3.94e-13 | 67.8 |
| Msa1106770 | MtrunA17_Chr7g0267011 | 28.497 | 193 | 123 | 7 | 16 | 201 | 8 | 192 | 1.32e-12 | 65.1 |
| Msa1106770 | MtrunA17_Chr3g0084871 | 29.885 | 261 | 165 | 7 | 16 | 264 | 16 | 270 | 1.72e-12 | 65.9 |
| Msa1106770 | MtrunA17_Chr6g0485711 | 27.536 | 207 | 129 | 5 | 22 | 208 | 184 | 389 | 2.78e-12 | 66.2 |
| Msa1106770 | MtrunA17_Chr7g0267001 | 24.706 | 255 | 163 | 8 | 16 | 265 | 8 | 238 | 2.80e-12 | 65.1 |
| Msa1106770 | MtrunA17_Chr6g0459271 | 27.037 | 270 | 181 | 9 | 1 | 263 | 1 | 261 | 2.89e-12 | 65.1 |
| Msa1106770 | MtrunA17_Chr6g0459331 | 26.394 | 269 | 157 | 9 | 16 | 263 | 13 | 261 | 1.01e-11 | 63.5 |
| Msa1106770 | MtrunA17_Chr4g0040371 | 26.792 | 265 | 168 | 7 | 16 | 265 | 19 | 272 | 1.93e-11 | 62.8 |
| Msa1106770 | MtrunA17_Chr6g0466681 | 27.586 | 232 | 132 | 7 | 18 | 219 | 66 | 291 | 2.11e-11 | 63.2 |
| Msa1106770 | MtrunA17_Chr7g0266891 | 27.734 | 256 | 170 | 8 | 16 | 264 | 7 | 254 | 3.96e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106770 | AT5G06060.1 | 59.449 | 254 | 100 | 1 | 11 | 264 | 4 | 254 | 6.94e-110 | 318 |
| Msa1106770 | AT1G07440.1 | 58.039 | 255 | 103 | 1 | 10 | 264 | 6 | 256 | 1.13e-105 | 307 |
| Msa1106770 | AT2G29320.1 | 60.547 | 256 | 96 | 3 | 11 | 264 | 7 | 259 | 3.73e-105 | 306 |
| Msa1106770 | AT2G29260.1 | 56.522 | 253 | 107 | 1 | 12 | 264 | 64 | 313 | 1.31e-104 | 306 |
| Msa1106770 | AT2G29300.1 | 59.608 | 255 | 99 | 2 | 11 | 264 | 2 | 253 | 1.12e-103 | 302 |
| Msa1106770 | AT2G29300.2 | 59.608 | 255 | 99 | 2 | 11 | 264 | 2 | 253 | 5.17e-103 | 301 |
| Msa1106770 | AT2G29340.2 | 59.055 | 254 | 101 | 1 | 11 | 264 | 2 | 252 | 1.56e-102 | 299 |
| Msa1106770 | AT2G29340.1 | 59.055 | 254 | 101 | 1 | 11 | 264 | 2 | 252 | 4.24e-102 | 300 |
| Msa1106770 | AT2G29290.2 | 56.693 | 254 | 107 | 1 | 11 | 264 | 2 | 252 | 2.10e-101 | 296 |
| Msa1106770 | AT2G29310.1 | 57.087 | 254 | 106 | 1 | 11 | 264 | 2 | 252 | 1.22e-99 | 292 |
| Msa1106770 | AT2G29360.1 | 55.094 | 265 | 114 | 3 | 1 | 264 | 1 | 261 | 2.70e-99 | 291 |
| Msa1106770 | AT2G29150.1 | 56.107 | 262 | 111 | 2 | 1 | 262 | 1 | 258 | 1.05e-98 | 290 |
| Msa1106770 | AT2G29330.1 | 57.480 | 254 | 105 | 2 | 11 | 264 | 2 | 252 | 1.61e-98 | 289 |
| Msa1106770 | AT2G30670.1 | 55.512 | 254 | 110 | 1 | 11 | 264 | 2 | 252 | 1.04e-97 | 287 |
| Msa1106770 | AT1G07450.1 | 55.159 | 252 | 109 | 2 | 13 | 264 | 5 | 252 | 1.77e-97 | 286 |
| Msa1106770 | AT2G29350.1 | 56.471 | 255 | 107 | 1 | 10 | 264 | 9 | 259 | 2.45e-97 | 286 |
| Msa1106770 | AT2G29370.1 | 54.651 | 258 | 113 | 2 | 8 | 264 | 7 | 261 | 6.99e-95 | 280 |
| Msa1106770 | AT2G29320.2 | 58.974 | 234 | 92 | 2 | 32 | 264 | 11 | 241 | 3.30e-93 | 275 |
| Msa1106770 | AT2G29290.1 | 54.310 | 232 | 103 | 1 | 33 | 264 | 7 | 235 | 7.63e-87 | 259 |
| Msa1106770 | AT2G29310.2 | 54.936 | 233 | 102 | 1 | 32 | 264 | 21 | 250 | 2.62e-85 | 255 |
| Msa1106770 | AT2G29350.3 | 54.464 | 224 | 98 | 1 | 41 | 264 | 2 | 221 | 2.27e-80 | 242 |
| Msa1106770 | AT2G29320.3 | 59.901 | 202 | 79 | 2 | 11 | 210 | 7 | 208 | 3.23e-80 | 241 |
| Msa1106770 | AT2G29340.3 | 58.706 | 201 | 83 | 0 | 11 | 211 | 2 | 202 | 5.94e-79 | 237 |
| Msa1106770 | AT2G29340.4 | 58.706 | 201 | 83 | 0 | 11 | 211 | 2 | 202 | 5.94e-79 | 237 |
| Msa1106770 | AT2G29350.2 | 55.721 | 201 | 89 | 0 | 10 | 210 | 9 | 209 | 2.15e-76 | 231 |
| Msa1106770 | AT2G29310.3 | 56.281 | 199 | 87 | 0 | 11 | 209 | 2 | 200 | 8.38e-76 | 229 |
| Msa1106770 | AT1G07440.2 | 56.213 | 169 | 74 | 0 | 10 | 178 | 6 | 174 | 2.37e-64 | 199 |
| Msa1106770 | AT2G29310.4 | 53.371 | 178 | 83 | 0 | 32 | 209 | 21 | 198 | 2.52e-61 | 192 |
| Msa1106770 | AT2G29170.1 | 62.500 | 96 | 35 | 1 | 8 | 102 | 7 | 102 | 1.11e-38 | 131 |
| Msa1106770 | AT4G05530.1 | 34.263 | 251 | 157 | 5 | 16 | 265 | 9 | 252 | 4.19e-34 | 124 |
| Msa1106770 | AT3G03980.1 | 32.342 | 269 | 166 | 4 | 7 | 263 | 5 | 269 | 5.61e-34 | 124 |
| Msa1106770 | AT1G54870.2 | 33.984 | 256 | 153 | 7 | 16 | 262 | 84 | 332 | 5.79e-32 | 120 |
| Msa1106770 | AT1G54870.1 | 33.984 | 256 | 153 | 7 | 16 | 262 | 82 | 330 | 5.82e-32 | 120 |
| Msa1106770 | AT3G05260.1 | 34.902 | 255 | 151 | 7 | 16 | 262 | 37 | 284 | 1.02e-31 | 119 |
| Msa1106770 | AT5G18210.1 | 33.333 | 258 | 158 | 5 | 15 | 263 | 7 | 259 | 1.99e-30 | 114 |
| Msa1106770 | AT4G13180.1 | 32.157 | 255 | 160 | 5 | 16 | 263 | 13 | 261 | 1.90e-28 | 109 |
| Msa1106770 | AT1G24360.1 | 32.794 | 247 | 150 | 7 | 22 | 262 | 80 | 316 | 4.60e-27 | 107 |
| Msa1106770 | AT5G18210.2 | 33.473 | 239 | 145 | 5 | 15 | 244 | 7 | 240 | 3.36e-26 | 103 |
| Msa1106770 | AT3G04000.1 | 33.086 | 269 | 163 | 4 | 7 | 262 | 5 | 269 | 1.59e-25 | 102 |
| Msa1106770 | AT3G12800.1 | 28.516 | 256 | 170 | 6 | 16 | 262 | 10 | 261 | 2.38e-24 | 99.4 |
| Msa1106770 | AT3G03330.1 | 30.808 | 198 | 130 | 5 | 12 | 203 | 37 | 233 | 5.68e-19 | 85.1 |
| Msa1106770 | AT1G63380.3 | 26.953 | 256 | 178 | 7 | 16 | 264 | 15 | 268 | 5.76e-19 | 84.3 |
| Msa1106770 | AT1G63380.1 | 26.953 | 256 | 178 | 7 | 16 | 264 | 17 | 270 | 6.11e-19 | 84.3 |
| Msa1106770 | AT1G63380.4 | 26.953 | 256 | 178 | 7 | 16 | 264 | 19 | 272 | 6.67e-19 | 84.3 |
| Msa1106770 | AT1G63380.2 | 26.953 | 256 | 178 | 7 | 16 | 264 | 22 | 275 | 9.12e-19 | 84.0 |
| Msa1106770 | AT1G62610.2 | 26.172 | 256 | 180 | 7 | 16 | 264 | 13 | 266 | 2.73e-18 | 82.4 |
| Msa1106770 | AT1G62610.4 | 26.172 | 256 | 180 | 7 | 16 | 264 | 19 | 272 | 2.93e-18 | 82.4 |
| Msa1106770 | AT1G62610.1 | 26.172 | 256 | 180 | 7 | 16 | 264 | 14 | 267 | 3.09e-18 | 82.4 |
| Msa1106770 | AT1G62610.3 | 26.172 | 256 | 180 | 7 | 16 | 264 | 15 | 268 | 3.29e-18 | 82.4 |
| Msa1106770 | AT3G55310.1 | 26.255 | 259 | 175 | 8 | 16 | 264 | 17 | 269 | 3.28e-17 | 79.7 |
| Msa1106770 | AT3G55290.1 | 27.099 | 262 | 169 | 9 | 16 | 264 | 18 | 270 | 6.16e-17 | 79.0 |
| Msa1106770 | AT3G55290.2 | 27.099 | 262 | 169 | 9 | 16 | 264 | 17 | 269 | 6.27e-17 | 79.0 |
| Msa1106770 | AT3G42960.1 | 29.151 | 271 | 163 | 9 | 11 | 265 | 5 | 262 | 1.31e-16 | 77.8 |
| Msa1106770 | AT3G46170.1 | 27.132 | 258 | 174 | 8 | 16 | 264 | 26 | 278 | 2.37e-16 | 77.4 |
| Msa1106770 | AT5G04900.1 | 28.643 | 199 | 125 | 6 | 22 | 208 | 83 | 276 | 9.02e-16 | 76.3 |
| Msa1106770 | AT3G47350.1 | 30.570 | 193 | 123 | 6 | 18 | 205 | 46 | 232 | 5.44e-15 | 73.9 |
| Msa1106770 | AT3G47350.2 | 30.570 | 193 | 123 | 6 | 18 | 205 | 46 | 232 | 5.83e-15 | 73.9 |
| Msa1106770 | AT5G50700.1 | 30.244 | 205 | 134 | 6 | 15 | 215 | 44 | 243 | 8.25e-15 | 73.6 |
| Msa1106770 | AT5G50600.1 | 30.244 | 205 | 134 | 6 | 15 | 215 | 44 | 243 | 8.25e-15 | 73.6 |
| Msa1106770 | AT2G17845.1 | 26.459 | 257 | 176 | 9 | 16 | 262 | 47 | 300 | 1.09e-14 | 72.8 |
| Msa1106770 | AT3G51680.1 | 27.305 | 282 | 183 | 9 | 1 | 265 | 20 | 296 | 1.39e-14 | 72.4 |
| Msa1106770 | AT4G03140.1 | 26.820 | 261 | 172 | 9 | 16 | 265 | 78 | 330 | 1.92e-14 | 72.4 |
| Msa1106770 | AT3G26760.1 | 28.185 | 259 | 172 | 7 | 16 | 264 | 36 | 290 | 2.89e-14 | 71.6 |
| Msa1106770 | AT4G13250.1 | 28.169 | 213 | 129 | 6 | 22 | 211 | 165 | 376 | 7.99e-14 | 71.2 |
| Msa1106770 | AT2G47130.1 | 28.409 | 264 | 157 | 9 | 16 | 264 | 6 | 252 | 8.54e-14 | 69.7 |
| Msa1106770 | AT1G49670.1 | 30.493 | 223 | 132 | 10 | 18 | 224 | 6 | 221 | 1.43e-13 | 70.9 |
| Msa1106770 | AT1G49670.2 | 30.493 | 223 | 132 | 10 | 18 | 224 | 6 | 221 | 1.84e-13 | 70.5 |
| Msa1106770 | AT3G47360.1 | 30.366 | 191 | 122 | 6 | 20 | 205 | 49 | 233 | 1.86e-13 | 69.3 |
| Msa1106770 | AT5G50590.2 | 28.646 | 192 | 126 | 6 | 16 | 202 | 45 | 230 | 3.68e-13 | 67.8 |
| Msa1106770 | AT5G50690.2 | 28.646 | 192 | 126 | 6 | 16 | 202 | 45 | 230 | 3.68e-13 | 67.8 |
| Msa1106770 | AT3G03350.2 | 30.636 | 173 | 107 | 4 | 36 | 203 | 188 | 352 | 3.80e-13 | 68.9 |
| Msa1106770 | AT5G50590.1 | 29.070 | 172 | 118 | 4 | 16 | 185 | 45 | 214 | 4.57e-13 | 68.2 |
| Msa1106770 | AT5G50690.1 | 29.070 | 172 | 118 | 4 | 16 | 185 | 45 | 214 | 4.57e-13 | 68.2 |
| Msa1106770 | AT1G67730.1 | 28.972 | 214 | 138 | 6 | 17 | 221 | 50 | 258 | 2.46e-12 | 66.2 |
| Msa1106770 | AT3G59710.3 | 24.306 | 288 | 161 | 7 | 13 | 253 | 13 | 290 | 8.10e-12 | 64.7 |
| Msa1106770 | AT3G59710.2 | 26.515 | 264 | 140 | 7 | 13 | 227 | 42 | 300 | 1.20e-11 | 64.3 |
| Msa1106770 | AT4G13250.2 | 27.536 | 207 | 127 | 6 | 22 | 208 | 165 | 368 | 1.43e-11 | 64.7 |
| Msa1106770 | AT4G09750.1 | 25.630 | 238 | 145 | 8 | 10 | 219 | 35 | 268 | 2.63e-11 | 63.2 |
| Msa1106770 | AT3G59710.1 | 24.739 | 287 | 159 | 8 | 14 | 253 | 24 | 300 | 4.05e-11 | 62.4 |
| Msa1106770 | AT5G10050.1 | 27.128 | 188 | 130 | 3 | 22 | 208 | 11 | 192 | 5.74e-11 | 62.0 |
Find 72 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGCTATTAATTTGATTT+TGG | 0.152434 | 7_3:+47342861 | Msa1106770:exon |
| ATTCCCATATTATCCGTTTA+TGG | 0.156544 | 7_3:+47338463 | Msa1106770:CDS |
| AACCATAATATAGCAGATTT+TGG | 0.180381 | 7_3:+47337326 | Msa1106770:five_prime_UTR |
| GTGGAAGAGTTAGCAGAATT+TGG | 0.185342 | 7_3:+47337999 | Msa1106770:CDS |
| CTTCTAAAACAATCTGGATA+TGG | 0.214489 | 7_3:+47338400 | Msa1106770:CDS |
| AACCAAAATCTGCTATATTA+TGG | 0.231045 | 7_3:-47337328 | None:intergenic |
| GGCTCCATAAACGGATAATA+TGG | 0.267329 | 7_3:-47338467 | None:intergenic |
| ATTTATTCATCTAGGGTTAT+AGG | 0.287421 | 7_3:-47342905 | None:intergenic |
| GTGTTTACTTCGTCCATTGC+TGG | 0.353879 | 7_3:+47338430 | Msa1106770:CDS |
| ACTAGTGATGATATCTCTTT+AGG | 0.358021 | 7_3:-47342763 | None:intergenic |
| ATTATTACATTTATTCATCT+AGG | 0.364177 | 7_3:-47342913 | None:intergenic |
| AGTAAGGGGTTTAATGTAAC+AGG | 0.367595 | 7_3:+47338086 | Msa1106770:CDS |
| AGAAGATATTAATAAATGTT+TGG | 0.368006 | 7_3:+47338052 | Msa1106770:CDS |
| TTTGATTATAATAAATTTGA+AGG | 0.374403 | 7_3:-47343012 | None:intergenic |
| TTGAAGGAATATAAAGATAA+TGG | 0.374913 | 7_3:-47342996 | None:intergenic |
| ACTGTTTCTTCTATCTTTCA+AGG | 0.382915 | 7_3:+47338158 | Msa1106770:CDS |
| CATCACTCTTGCAATCAATC+AGG | 0.389523 | 7_3:+47341066 | Msa1106770:CDS |
| GGTATGACTGCGTTAGTAAC+AGG | 0.416451 | 7_3:+47337430 | Msa1106770:CDS |
| TACCCTCTTCTAAAACAATC+TGG | 0.416961 | 7_3:+47338394 | Msa1106770:CDS |
| TTAATAAATGTTTGGAAGAG+TGG | 0.419268 | 7_3:+47338060 | Msa1106770:CDS |
| TTCTAAAACAATCTGGATAT+GGG | 0.427451 | 7_3:+47338401 | Msa1106770:CDS |
| CTACTTTACAAACAAAATCA+AGG | 0.435504 | 7_3:+47337302 | Msa1106770:five_prime_UTR |
| GAAGATATAAACACTACAAT+TGG | 0.437311 | 7_3:+47338331 | Msa1106770:CDS |
| TGAAGAACGCAAGAAACTAA+TGG | 0.439032 | 7_3:+47338133 | Msa1106770:CDS |
| AACAAAGCTAAGCAGCTTCA+AGG | 0.440755 | 7_3:+47337387 | Msa1106770:CDS |
| TTTGGAAGAGTGGAGAAGTA+AGG | 0.445114 | 7_3:+47338070 | Msa1106770:CDS |
| GGACAAGTTATAGCTATTGA+TGG | 0.448377 | 7_3:+47342823 | Msa1106770:CDS |
| CGTGCAAATGCTGTGGCACC+TGG | 0.452656 | 7_3:+47341032 | Msa1106770:CDS |
| TTTATAACTAACATGACTGT+TGG | 0.455029 | 7_3:-47342940 | None:intergenic |
| ACAGGTGGAACCCGAGGCAT+TGG | 0.457383 | 7_3:+47337448 | Msa1106770:CDS |
| TTATTACATTTATTCATCTA+GGG | 0.461648 | 7_3:-47342912 | None:intergenic |
| TGTAGTGTCTCAAACACCTA+TGG | 0.481462 | 7_3:+47342726 | Msa1106770:CDS |
| TCAAACACCTATGGGTCGTA+TGG | 0.482046 | 7_3:+47342735 | Msa1106770:CDS |
| TCCGTTTATGGAGCCACAAA+AGG | 0.482063 | 7_3:+47338475 | Msa1106770:CDS |
| TAAATCTTGATTGACATTGT+TGG | 0.482308 | 7_3:+47342959 | Msa1106770:three_prime_UTR |
| TTGGAAGAGTGGAGAAGTAA+GGG | 0.482971 | 7_3:+47338071 | Msa1106770:CDS |
| CGAAGAACTTAGCATTGGAA+TGG | 0.492016 | 7_3:+47340994 | Msa1106770:CDS |
| TTATAACTAACATGACTGTT+GGG | 0.492201 | 7_3:-47342939 | None:intergenic |
| AGTGATGTCTTGACAGGTCC+AGG | 0.505435 | 7_3:-47341050 | None:intergenic |
| CATTGTTGGTTGGACCTCCA+TGG | 0.509252 | 7_3:+47342973 | Msa1106770:three_prime_UTR |
| GCTCCATAAACGGATAATAT+GGG | 0.509272 | 7_3:-47338466 | None:intergenic |
| ATGAATTAGGTACGCAATTG+TGG | 0.509522 | 7_3:+47337980 | Msa1106770:intron |
| TGCAGCAGGAAGACAAAGAA+AGG | 0.535846 | 7_3:-47342788 | None:intergenic |
| CAGGTGGAACCCGAGGCATT+GGG | 0.536116 | 7_3:+47337449 | Msa1106770:CDS |
| ATTCACGAAGAACTTAGCAT+TGG | 0.539967 | 7_3:+47340989 | Msa1106770:CDS |
| GAAGAACTTAGCATTGGAAT+GGG | 0.540363 | 7_3:+47340995 | Msa1106770:CDS |
| AGGAAATTACCCAATGCCTC+GGG | 0.542864 | 7_3:-47337458 | None:intergenic |
| AAGGAAATTACCCAATGCCT+CGG | 0.548009 | 7_3:-47337459 | None:intergenic |
| TTCTTACAGAATGATGATGA+AGG | 0.553861 | 7_3:+47342685 | Msa1106770:intron |
| GAATATAAAGATAATGGCCA+TGG | 0.556357 | 7_3:-47342990 | None:intergenic |
| TCTTACAGAATGATGATGAA+GGG | 0.557071 | 7_3:+47342686 | Msa1106770:intron |
| TGGAAGAGTGGAGAAGTAAG+GGG | 0.558528 | 7_3:+47338072 | Msa1106770:CDS |
| GAAGGGGTTGAAACTGTAGA+TGG | 0.558918 | 7_3:+47342703 | Msa1106770:CDS |
| GCAGCTTCAAGGATAAAAGA+TGG | 0.568212 | 7_3:+47337398 | Msa1106770:CDS |
| CAAACACCTATGGGTCGTAT+GGG | 0.570361 | 7_3:+47342736 | Msa1106770:CDS |
| GTAGTGTCTCAAACACCTAT+GGG | 0.570940 | 7_3:+47342727 | Msa1106770:CDS |
| TCTTGATTGACATTGTTGGT+TGG | 0.577182 | 7_3:+47342963 | Msa1106770:three_prime_UTR |
| TGCAAGAGTGATGTCTTGAC+AGG | 0.582780 | 7_3:-47341056 | None:intergenic |
| AATAGCTTGTAAACCAGCAA+TGG | 0.586264 | 7_3:-47338443 | None:intergenic |
| ATCACTCTTGCAATCAATCA+GGG | 0.588577 | 7_3:+47341067 | Msa1106770:CDS |
| CCTGCTGCATCATACATCAC+TGG | 0.594030 | 7_3:+47342802 | Msa1106770:CDS |
| GGTATGCAAGTTGACACAAA+TGG | 0.595523 | 7_3:-47338375 | None:intergenic |
| TATTCATCTAGGGTTATAGG+AGG | 0.597645 | 7_3:-47342902 | None:intergenic |
| CTTACAGAATGATGATGAAG+GGG | 0.614133 | 7_3:+47342687 | Msa1106770:intron |
| GATAAAAGATGGTCACTGCA+TGG | 0.614860 | 7_3:+47337409 | Msa1106770:CDS |
| CAAGTTATAGCTATTGATGG+AGG | 0.616648 | 7_3:+47342826 | Msa1106770:CDS |
| GGCTCTCCCATACGACCCAT+AGG | 0.618378 | 7_3:-47342742 | None:intergenic |
| CCAGTGATGTATGATGCAGC+AGG | 0.633686 | 7_3:-47342802 | None:intergenic |
| TTAGTAACAGGTGGAACCCG+AGG | 0.644580 | 7_3:+47337442 | Msa1106770:CDS |
| TATAAAGATAATGGCCATGG+AGG | 0.649634 | 7_3:-47342987 | None:intergenic |
| TAATATTCGTGCAAATGCTG+TGG | 0.649939 | 7_3:+47341025 | Msa1106770:CDS |
| ATGACTGCGTTAGTAACAGG+TGG | 0.678039 | 7_3:+47337433 | Msa1106770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTATTTACATAAAAAAA+AGG | - | chr7_3:47337599-47337618 | None:intergenic | 10.0% |
| !!! | TTTTTTTATGTAAATAATTG+TGG | + | chr7_3:47337599-47337618 | Msa1106770:intron | 10.0% |
| !!! | TTATTTTTCTATTATGAATT+AGG | + | chr7_3:47337967-47337986 | Msa1106770:intron | 10.0% |
| !! | AGAAAAAAAATAAAAATACA+TGG | - | chr7_3:47338207-47338226 | None:intergenic | 10.0% |
| !! | ATAATTTAATTAGATAAAGA+AGG | + | chr7_3:47338849-47338868 | Msa1106770:intron | 10.0% |
| !! | TAATTTAATTAGATAAAGAA+GGG | + | chr7_3:47338850-47338869 | Msa1106770:intron | 10.0% |
| !! | TTATACATAAATATCTATTA+AGG | - | chr7_3:47339761-47339780 | None:intergenic | 10.0% |
| !! | TAATTTACAATATTTAATAG+CGG | - | chr7_3:47339953-47339972 | None:intergenic | 10.0% |
| !!! | AAATTTTATTATAGAGAAAA+AGG | + | chr7_3:47340822-47340841 | Msa1106770:intron | 10.0% |
| !!! | ATTTTGTTTATATTTTGAAA+CGG | + | chr7_3:47342652-47342671 | Msa1106770:intron | 10.0% |
| !! | TTTGATTATAATAAATTTGA+AGG | - | chr7_3:47343015-47343034 | None:intergenic | 10.0% |
| !!! | TATAATTTTGTTGTCAAATT+GGG | + | chr7_3:47337626-47337645 | Msa1106770:intron | 15.0% |
| !! | GTTTATTTAACAAATTCAAT+CGG | + | chr7_3:47337705-47337724 | Msa1106770:intron | 15.0% |
| !! | AAAGACTATATTCATTTAAT+TGG | - | chr7_3:47337907-47337926 | None:intergenic | 15.0% |
| !! | TAGAAAAATAAGAAATAACA+AGG | - | chr7_3:47337958-47337977 | None:intergenic | 15.0% |
| !! | AGAAGATATTAATAAATGTT+TGG | + | chr7_3:47338052-47338071 | Msa1106770:CDS | 15.0% |
| !!! | TTTTATGTAGTTTTTCTTTT+AGG | + | chr7_3:47338258-47338277 | Msa1106770:intron | 15.0% |
| !!! | GAATGAAATTAATTTTCAAA+TGG | + | chr7_3:47339104-47339123 | Msa1106770:intron | 15.0% |
| !!! | TGTAATAATATCCATTTTAA+CGG | + | chr7_3:47339446-47339465 | Msa1106770:intron | 15.0% |
| !!! | ATATATTTATTTTTGTCAAC+TGG | + | chr7_3:47339510-47339529 | Msa1106770:intron | 15.0% |
| !! | AAATATTTATTTGGCAATAT+TGG | + | chr7_3:47339651-47339670 | Msa1106770:intron | 15.0% |
| !!! | TTTTTTAAAAATCTTATCCA+TGG | + | chr7_3:47340422-47340441 | Msa1106770:intron | 15.0% |
| !! | ACTTCAAAATAATAGTTTAA+AGG | - | chr7_3:47340896-47340915 | None:intergenic | 15.0% |
| !! | CAAATTTAATTAATCAATTC+AGG | + | chr7_3:47340954-47340973 | Msa1106770:intron | 15.0% |
| !!! | TTGATTATCTTTATGTTTTT+TGG | - | chr7_3:47341318-47341337 | None:intergenic | 15.0% |
| !!! | GTTTTTCTTATGATTAATAT+AGG | - | chr7_3:47341388-47341407 | None:intergenic | 15.0% |
| !! | ATGATTAAGTTTAAATTTCA+TGG | - | chr7_3:47341410-47341429 | None:intergenic | 15.0% |
| !! | TCAAATATGACAAATATTAT+GGG | - | chr7_3:47341947-47341966 | None:intergenic | 15.0% |
| !! | ATCAAATATGACAAATATTA+TGG | - | chr7_3:47341948-47341967 | None:intergenic | 15.0% |
| !!! | CCTTGAAATTTTTTTTTTTT+TGG | - | chr7_3:47342367-47342386 | None:intergenic | 15.0% |
| !! | CCAAAAAAAAAAAAATTTCA+AGG | + | chr7_3:47342364-47342383 | Msa1106770:intron | 15.0% |
| !! | AATATCACTTATGAAAATAA+TGG | + | chr7_3:47342490-47342509 | Msa1106770:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr7_3:47342545-47342564 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTCATTTTTT+AGG | + | chr7_3:47342554-47342573 | Msa1106770:intron | 15.0% |
| !!! | ATAAACAAAATTCACTTTTT+AGG | - | chr7_3:47342643-47342662 | None:intergenic | 15.0% |
| !!! | AATTGCTATTAATTTGATTT+TGG | + | chr7_3:47342861-47342880 | Msa1106770:exon | 15.0% |
| !! | TTATTACATTTATTCATCTA+GGG | - | chr7_3:47342915-47342934 | None:intergenic | 15.0% |
| !! | ATTATTACATTTATTCATCT+AGG | - | chr7_3:47342916-47342935 | None:intergenic | 15.0% |
| !!! | CTATAATTTTGTTGTCAAAT+TGG | + | chr7_3:47337625-47337644 | Msa1106770:intron | 20.0% |
| !!! | GTTGTTTTATGTTATTTACT+TGG | + | chr7_3:47337795-47337814 | Msa1106770:intron | 20.0% |
| !!! | TTTTATGTTATTTACTTGGT+TGG | + | chr7_3:47337799-47337818 | Msa1106770:intron | 20.0% |
| !!! | CGTTTCATTGATTAAAAAAT+AGG | + | chr7_3:47338500-47338519 | Msa1106770:intron | 20.0% |
| !! | ATAGCATATTCATATATTTC+AGG | + | chr7_3:47338790-47338809 | Msa1106770:intron | 20.0% |
| !! | TTTGTATTGAAAAATGAAGA+AGG | - | chr7_3:47338884-47338903 | None:intergenic | 20.0% |
| !!! | TCTTCATTTTTCAATACAAA+TGG | + | chr7_3:47338884-47338903 | Msa1106770:intron | 20.0% |
| !!! | TATACAATAATTGATGATGT+GGG | - | chr7_3:47338978-47338997 | None:intergenic | 20.0% |
| !!! | TTATACAATAATTGATGATG+TGG | - | chr7_3:47338979-47338998 | None:intergenic | 20.0% |
| !!! | TTTAGGTTACAATTTTCAAA+AGG | + | chr7_3:47339141-47339160 | Msa1106770:intron | 20.0% |
| !! | TACAATTAAATGTGAAAAAG+TGG | + | chr7_3:47339551-47339570 | Msa1106770:intron | 20.0% |
| !! | ACAATTAAATGTGAAAAAGT+GGG | + | chr7_3:47339552-47339571 | Msa1106770:intron | 20.0% |
| !! | CAATACATAATTTATGCAAT+GGG | - | chr7_3:47339593-47339612 | None:intergenic | 20.0% |
| !! | ACAATACATAATTTATGCAA+TGG | - | chr7_3:47339594-47339613 | None:intergenic | 20.0% |
| !!! | ATCTATATCGATTAATTAGT+GGG | - | chr7_3:47339805-47339824 | None:intergenic | 20.0% |
| !! | TTTATACATAAGATATCTAC+CGG | - | chr7_3:47339849-47339868 | None:intergenic | 20.0% |
| !! | TTTAATATGAACCCAAAATA+TGG | + | chr7_3:47340760-47340779 | Msa1106770:intron | 20.0% |
| !!! | TATCTTTATGTTTTTTGGTT+TGG | - | chr7_3:47341313-47341332 | None:intergenic | 20.0% |
| !! | ACAAAATTTAAACATTTGAG+AGG | + | chr7_3:47341350-47341369 | Msa1106770:intron | 20.0% |
| !! | TTTCTTATGATTAATATAGG+TGG | - | chr7_3:47341385-47341404 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTGTTCTGTTGT+TGG | - | chr7_3:47341663-47341682 | None:intergenic | 20.0% |
| !!! | TCAAAAAGAGTATCATTTTT+AGG | - | chr7_3:47342163-47342182 | None:intergenic | 20.0% |
| !!! | AAAACTATTTTTTGCAAATG+TGG | + | chr7_3:47342185-47342204 | Msa1106770:intron | 20.0% |
| !!! | TTTTTTTTTTTGGTACGAAA+TGG | - | chr7_3:47342357-47342376 | None:intergenic | 20.0% |
| !!! | GAGATTTTATTTTCAAACTA+TGG | + | chr7_3:47342395-47342414 | Msa1106770:intron | 20.0% |
| !! | TTGAAGGAATATAAAGATAA+TGG | - | chr7_3:47342999-47343018 | None:intergenic | 20.0% |
| ! | CTACTTTACAAACAAAATCA+AGG | + | chr7_3:47337302-47337321 | Msa1106770:five_prime_UTR | 25.0% |
| !! | AACCATAATATAGCAGATTT+TGG | + | chr7_3:47337326-47337345 | Msa1106770:five_prime_UTR | 25.0% |
| ! | AACCAAAATCTGCTATATTA+TGG | - | chr7_3:47337331-47337350 | None:intergenic | 25.0% |
| ! | GTAGTCATAAACAAGAAAAA+TGG | + | chr7_3:47337360-47337379 | Msa1106770:exon | 25.0% |
| ! | CACAAAGACAATAAACAAAA+CGG | - | chr7_3:47337655-47337674 | None:intergenic | 25.0% |
| ! | ATCGATTGAAATATTCATGT+CGG | - | chr7_3:47337758-47337777 | None:intergenic | 25.0% |
| ! | TTAATAAATGTTTGGAAGAG+TGG | + | chr7_3:47338060-47338079 | Msa1106770:CDS | 25.0% |
| !! | ATCTATTATTTTCTTCGAGA+GGG | - | chr7_3:47338302-47338321 | None:intergenic | 25.0% |
| !! | TATCTATTATTTTCTTCGAG+AGG | - | chr7_3:47338303-47338322 | None:intergenic | 25.0% |
| ! | GAAGATATAAACACTACAAT+TGG | + | chr7_3:47338331-47338350 | Msa1106770:CDS | 25.0% |
| !!! | TTCTAAAACAATCTGGATAT+GGG | + | chr7_3:47338401-47338420 | Msa1106770:CDS | 25.0% |
| ! | CAGAACAAAAAAAGAATACA+AGG | - | chr7_3:47338589-47338608 | None:intergenic | 25.0% |
| !!! | GACGGATTAATAATAGTTTA+AGG | + | chr7_3:47338766-47338785 | Msa1106770:intron | 25.0% |
| ! | TGGTTGAATTGAAATACTTT+AGG | + | chr7_3:47339124-47339143 | Msa1106770:intron | 25.0% |
| ! | TTCTTCTTTGTAATTCATTG+TGG | + | chr7_3:47339173-47339192 | Msa1106770:intron | 25.0% |
| !!! | TTATTTAGTTTGACTCACAA+AGG | + | chr7_3:47339224-47339243 | Msa1106770:intron | 25.0% |
| !!! | TAATATCCATTTTAACGGAA+AGG | + | chr7_3:47339451-47339470 | Msa1106770:intron | 25.0% |
| ! | CAATTAAATGTGAAAAAGTG+GGG | + | chr7_3:47339553-47339572 | Msa1106770:intron | 25.0% |
| !! | CATCTATATCGATTAATTAG+TGG | - | chr7_3:47339806-47339825 | None:intergenic | 25.0% |
| !! | CATCTATATCGATTAATTAG+TGG | - | chr7_3:47339806-47339825 | None:intergenic | 25.0% |
| ! | CTAATTAATCGATATAGATG+CGG | + | chr7_3:47339806-47339825 | Msa1106770:intron | 25.0% |
| !!! | ACAATATTTAATAGCGGATA+TGG | - | chr7_3:47339947-47339966 | None:intergenic | 25.0% |
| !!! | ATTACACTCCTTTTTTTTTG+TGG | + | chr7_3:47340063-47340082 | Msa1106770:intron | 25.0% |
| ! | TCATACTCTTAAGATAAGAT+AGG | - | chr7_3:47340654-47340673 | None:intergenic | 25.0% |
| !! | GTGCTTTTCTTTACTATTTT+TGG | + | chr7_3:47340790-47340809 | Msa1106770:intron | 25.0% |
| !!! | GCTTAGATAGTTTAATTTTG+TGG | - | chr7_3:47340935-47340954 | None:intergenic | 25.0% |
| ! | TTAATTAATCAATTCAGGAG+CGG | + | chr7_3:47340959-47340978 | Msa1106770:intron | 25.0% |
| ! | TTGAGAATATACAATAGTCA+AGG | + | chr7_3:47341254-47341273 | Msa1106770:intron | 25.0% |
| ! | ATAAGGTTTACTTATCACAA+TGG | - | chr7_3:47341452-47341471 | None:intergenic | 25.0% |
| !! | AAGATTGTCTTGATTTGATT+TGG | - | chr7_3:47341541-47341560 | None:intergenic | 25.0% |
| ! | TTGCACATAACATTCATTAA+AGG | + | chr7_3:47342100-47342119 | Msa1106770:intron | 25.0% |
| ! | ATTGTAGGAATAAAATCTCA+AGG | + | chr7_3:47342213-47342232 | Msa1106770:intron | 25.0% |
| !! | TTGTGTGTGTGATTTTATAA+TGG | + | chr7_3:47342326-47342345 | Msa1106770:intron | 25.0% |
| !! | AGACAATAGATTAGTCAATT+GGG | - | chr7_3:47342453-47342472 | None:intergenic | 25.0% |
| !! | AAGACAATAGATTAGTCAAT+TGG | - | chr7_3:47342454-47342473 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr7_3:47342579-47342598 | Msa1106770:intron | 25.0% |
| ! | TAGGTTCATTCATTTAATGA+TGG | - | chr7_3:47342573-47342592 | None:intergenic | 25.0% |
| !!! | TTGTTTATATTTTGAAACGG+AGG | + | chr7_3:47342655-47342674 | Msa1106770:intron | 25.0% |
| !!! | TGTTTATATTTTGAAACGGA+GGG | + | chr7_3:47342656-47342675 | Msa1106770:intron | 25.0% |
| !! | ATTTATTCATCTAGGGTTAT+AGG | - | chr7_3:47342908-47342927 | None:intergenic | 25.0% |
| ! | TTATAACTAACATGACTGTT+GGG | - | chr7_3:47342942-47342961 | None:intergenic | 25.0% |
| ! | TTTATAACTAACATGACTGT+TGG | - | chr7_3:47342943-47342962 | None:intergenic | 25.0% |
| ! | TAAATCTTGATTGACATTGT+TGG | + | chr7_3:47342959-47342978 | Msa1106770:three_prime_UTR | 25.0% |
| TGTCGTTAAGAGTTAAGATA+AGG | - | chr7_3:47337481-47337500 | None:intergenic | 30.0% | |
| TAAAAAAAAGGGAAGAACGA+TGG | - | chr7_3:47337587-47337606 | None:intergenic | 30.0% | |
| TCGATTGAAATATTCATGTC+GGG | - | chr7_3:47337757-47337776 | None:intergenic | 30.0% | |
| ! | ACTGTTTCTTCTATCTTTCA+AGG | + | chr7_3:47338158-47338177 | Msa1106770:CDS | 30.0% |
| GAAAGCTCAATATTCTAGTA+CGG | + | chr7_3:47338180-47338199 | Msa1106770:intron | 30.0% | |
| ! | TCTATTATTTTCTTCGAGAG+GGG | - | chr7_3:47338301-47338320 | None:intergenic | 30.0% |
| ! | ATTGGTACAAATTTTGTGTC+TGG | + | chr7_3:47338349-47338368 | Msa1106770:CDS | 30.0% |
| !!! | ATCCAGATTGTTTTAGAAGA+GGG | - | chr7_3:47338399-47338418 | None:intergenic | 30.0% |
| !!! | TATCCAGATTGTTTTAGAAG+AGG | - | chr7_3:47338400-47338419 | None:intergenic | 30.0% |
| !! | CTTCTAAAACAATCTGGATA+TGG | + | chr7_3:47338400-47338419 | Msa1106770:CDS | 30.0% |
| ATTCCCATATTATCCGTTTA+TGG | + | chr7_3:47338463-47338482 | Msa1106770:CDS | 30.0% | |
| !!! | CTTGCTTTTTAGAGATTTCA+GGG | - | chr7_3:47338712-47338731 | None:intergenic | 30.0% |
| !!! | TCTTGCTTTTTAGAGATTTC+AGG | - | chr7_3:47338713-47338732 | None:intergenic | 30.0% |
| ATTAGATAAAGAAGGGAGTT+CGG | + | chr7_3:47338857-47338876 | Msa1106770:intron | 30.0% | |
| CTTAAAAGAACACAACATTG+TGG | - | chr7_3:47339041-47339060 | None:intergenic | 30.0% | |
| ! | CAATGTTGTGTTCTTTTAAG+TGG | + | chr7_3:47339041-47339060 | Msa1106770:intron | 30.0% |
| ! | AGGTTACAATTTTCAAAAGG+TGG | + | chr7_3:47339144-47339163 | Msa1106770:intron | 30.0% |
| TTTGTAATTCATTGTGGAGA+AGG | + | chr7_3:47339179-47339198 | Msa1106770:intron | 30.0% | |
| TTTGACCAAACCAAAATTCT+TGG | - | chr7_3:47339284-47339303 | None:intergenic | 30.0% | |
| ! | TTTCTCTTGGTGTATTTAGT+TGG | + | chr7_3:47339421-47339440 | Msa1106770:intron | 30.0% |
| TATCAAATGAGCTAAACTCA+CGG | + | chr7_3:47339616-47339635 | Msa1106770:intron | 30.0% | |
| !! | TATTTGGCAATATTGGTTCA+TGG | + | chr7_3:47339658-47339677 | Msa1106770:intron | 30.0% |
| CGATATAGATGCAGATTTAA+TGG | + | chr7_3:47339815-47339834 | Msa1106770:intron | 30.0% | |
| !! | CAGGAAGTTGAAAAGTATTA+AGG | - | chr7_3:47339985-47340004 | None:intergenic | 30.0% |
| TAATAACACTCACAACACTA+AGG | - | chr7_3:47340017-47340036 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr7_3:47340111-47340130 | None:intergenic | 30.0% | |
| !!! | AGCAAGAAACTTTGTTTTTG+TGG | + | chr7_3:47340207-47340226 | Msa1106770:intron | 30.0% |
| CGGATTTCATATTTATCGAA+CGG | + | chr7_3:47340524-47340543 | Msa1106770:intron | 30.0% | |
| TTCATATTTATCGAACGGAA+CGG | + | chr7_3:47340529-47340548 | Msa1106770:intron | 30.0% | |
| !!! | TGAAACCTTTGTTTTTTCAG+AGG | + | chr7_3:47340617-47340636 | Msa1106770:intron | 30.0% |
| GAACCCAAAATATGGTTTAA+AGG | + | chr7_3:47340768-47340787 | Msa1106770:intron | 30.0% | |
| ! | GCACCTTTAAACCATATTTT+GGG | - | chr7_3:47340774-47340793 | None:intergenic | 30.0% |
| ! | AGCACCTTTAAACCATATTT+TGG | - | chr7_3:47340775-47340794 | None:intergenic | 30.0% |
| !!! | CTTTATGTTTTTTGGTTTGG+TGG | - | chr7_3:47341310-47341329 | None:intergenic | 30.0% |
| TTATAGACAATCATGATTGC+CGG | + | chr7_3:47341468-47341487 | Msa1106770:intron | 30.0% | |
| ! | TGGTTGCGATTCTTTTAAAT+TGG | + | chr7_3:47341500-47341519 | Msa1106770:intron | 30.0% |
| ATATCAACCACATGACAAAA+AGG | + | chr7_3:47341579-47341598 | Msa1106770:intron | 30.0% | |
| TGACAAATATTATGGGAAGT+AGG | - | chr7_3:47341940-47341959 | None:intergenic | 30.0% | |
| TATAAAATCACACACACAAG+TGG | - | chr7_3:47342325-47342344 | None:intergenic | 30.0% | |
| CTATTGTCTTATGAGAATTG+TGG | + | chr7_3:47342464-47342483 | Msa1106770:intron | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr7_3:47342541-47342560 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr7_3:47342542-47342561 | None:intergenic | 30.0% |
| GATGTATGTGGTTCATAATA+TGG | + | chr7_3:47342591-47342610 | Msa1106770:intron | 30.0% | |
| !! | CATTCATTTAATGATGGATG+TGG | - | chr7_3:47342618-47342637 | None:intergenic | 30.0% |
| ! | TTCTTACAGAATGATGATGA+AGG | + | chr7_3:47342685-47342704 | Msa1106770:intron | 30.0% |
| ! | TCTTACAGAATGATGATGAA+GGG | + | chr7_3:47342686-47342705 | Msa1106770:intron | 30.0% |
| ACTAGTGATGATATCTCTTT+AGG | - | chr7_3:47342766-47342785 | None:intergenic | 30.0% | |
| ! | GAATATAAAGATAATGGCCA+TGG | - | chr7_3:47342993-47343012 | None:intergenic | 30.0% |
| GTTCGTATGTTCATTCTTCA+CGG | + | chr7_3:47337831-47337850 | Msa1106770:intron | 35.0% | |
| ATGAATTAGGTACGCAATTG+TGG | + | chr7_3:47337980-47337999 | Msa1106770:intron | 35.0% | |
| AGTAAGGGGTTTAATGTAAC+AGG | + | chr7_3:47338086-47338105 | Msa1106770:CDS | 35.0% | |
| TGAAGAACGCAAGAAACTAA+TGG | + | chr7_3:47338133-47338152 | Msa1106770:CDS | 35.0% | |
| !! | TACCCTCTTCTAAAACAATC+TGG | + | chr7_3:47338394-47338413 | Msa1106770:CDS | 35.0% |
| ! | AATAGCTTGTAAACCAGCAA+TGG | - | chr7_3:47338446-47338465 | None:intergenic | 35.0% |
| GCTCCATAAACGGATAATAT+GGG | - | chr7_3:47338469-47338488 | None:intergenic | 35.0% | |
| ! | TCAATGAAACGTACCTTTTG+TGG | - | chr7_3:47338491-47338510 | None:intergenic | 35.0% |
| CGTTTGTAATTACAGTGATG+TGG | - | chr7_3:47338659-47338678 | None:intergenic | 35.0% | |
| ATTTCAGGGACTAATTACAG+GGG | - | chr7_3:47338698-47338717 | None:intergenic | 35.0% | |
| GATTTCAGGGACTAATTACA+GGG | - | chr7_3:47338699-47338718 | None:intergenic | 35.0% | |
| AGATTTCAGGGACTAATTAC+AGG | - | chr7_3:47338700-47338719 | None:intergenic | 35.0% | |
| TAGTTTGACTCACAAAGGTT+TGG | + | chr7_3:47339229-47339248 | Msa1106770:intron | 35.0% | |
| GTGTATGAGAAAATCTTGTG+TGG | + | chr7_3:47339251-47339270 | Msa1106770:intron | 35.0% | |
| CAAACCAAAATTCTTGGTCT+TGG | - | chr7_3:47339278-47339297 | None:intergenic | 35.0% | |
| !!! | CAAGACCAAGAATTTTGGTT+TGG | + | chr7_3:47339276-47339295 | Msa1106770:intron | 35.0% |
| TGTGACCAAACCAAAATTCT+TGG | + | chr7_3:47339380-47339399 | Msa1106770:intron | 35.0% | |
| !!! | CATGACCAAGAATTTTGGTT+TGG | - | chr7_3:47339388-47339407 | None:intergenic | 35.0% |
| CAAACCAAAATTCTTGGTCA+TGG | + | chr7_3:47339386-47339405 | Msa1106770:intron | 35.0% | |
| AAAGGTGACGAACATATAAG+AGG | + | chr7_3:47339469-47339488 | Msa1106770:intron | 35.0% | |
| ! | ATGTGAAAAAGTGGGGTATT+TGG | + | chr7_3:47339560-47339579 | Msa1106770:intron | 35.0% |
| ! | TGTGAAAAAGTGGGGTATTT+GGG | + | chr7_3:47339561-47339580 | Msa1106770:intron | 35.0% |
| ! | GTGAGTTTAGCTCATTTGAT+AGG | - | chr7_3:47339617-47339636 | None:intergenic | 35.0% |
| ATCAAATGAGCTAAACTCAC+GGG | + | chr7_3:47339617-47339636 | Msa1106770:intron | 35.0% | |
| !! | TATTGGTTCATGGTAAGAGT+AGG | + | chr7_3:47339668-47339687 | Msa1106770:intron | 35.0% |
| ! | ATTGGTTCATGGTAAGAGTA+GGG | + | chr7_3:47339669-47339688 | Msa1106770:intron | 35.0% |
| ! | ATTTTATCCACGGATATCCA+CGG | - | chr7_3:47339715-47339734 | None:intergenic | 35.0% |
| AGATTTAATGGTATCTGCAC+CGG | + | chr7_3:47339827-47339846 | Msa1106770:intron | 35.0% | |
| CGATATAGATGCGGATTTAA+TGG | + | chr7_3:47339902-47339921 | Msa1106770:intron | 35.0% | |
| !!! | AACACTAAGGTTTTTTGCTC+AGG | - | chr7_3:47340004-47340023 | None:intergenic | 35.0% |
| !!! | ACACTCCTTTTTTTTTGTGG+TGG | + | chr7_3:47340066-47340085 | Msa1106770:intron | 35.0% |
| CATAATATATGCAAGGTCTG+GGG | - | chr7_3:47340104-47340123 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | - | chr7_3:47340105-47340124 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | - | chr7_3:47340106-47340125 | None:intergenic | 35.0% | |
| CTGTATTACGCTCCTTTAAA+AGG | + | chr7_3:47340159-47340178 | Msa1106770:intron | 35.0% | |
| ! | CCACTTTCACTACCTTTTAA+AGG | - | chr7_3:47340174-47340193 | None:intergenic | 35.0% |
| ! | CCTTTAAAAGGTAGTGAAAG+TGG | + | chr7_3:47340171-47340190 | Msa1106770:intron | 35.0% |
| TAAAAGGTAGTGAAAGTGGT+CGG | + | chr7_3:47340175-47340194 | Msa1106770:intron | 35.0% | |
| !!! | ATAGATTTTGAGATATCCGC+GGG | - | chr7_3:47340460-47340479 | None:intergenic | 35.0% |
| !!! | CATAGATTTTGAGATATCCG+CGG | - | chr7_3:47340461-47340480 | None:intergenic | 35.0% |
| ! | TCTATGGATTATCCGCTAAA+CGG | + | chr7_3:47340475-47340494 | Msa1106770:intron | 35.0% |
| GTATTCTATCCATATCTACG+CGG | - | chr7_3:47340505-47340524 | None:intergenic | 35.0% | |
| GCGTAGATATGGATAGAATA+CGG | + | chr7_3:47340504-47340523 | Msa1106770:intron | 35.0% | |
| GGGATGTAAATGGATATCAA+TGG | - | chr7_3:47340579-47340598 | None:intergenic | 35.0% | |
| ATCCATTTACATCCCTAAGT+AGG | + | chr7_3:47340584-47340603 | Msa1106770:intron | 35.0% | |
| ATTCACGAAGAACTTAGCAT+TGG | + | chr7_3:47340989-47341008 | Msa1106770:CDS | 35.0% | |
| ! | GAAGAACTTAGCATTGGAAT+GGG | + | chr7_3:47340995-47341014 | Msa1106770:CDS | 35.0% |
| TAATATTCGTGCAAATGCTG+TGG | + | chr7_3:47341025-47341044 | Msa1106770:CDS | 35.0% | |
| ATCACTCTTGCAATCAATCA+GGG | + | chr7_3:47341067-47341086 | Msa1106770:CDS | 35.0% | |
| GGCAATCATGATTGTCTATA+AGG | - | chr7_3:47341469-47341488 | None:intergenic | 35.0% | |
| TTCCTTCCACACAAAAAGAT+GGG | + | chr7_3:47341812-47341831 | Msa1106770:intron | 35.0% | |
| ! | TTTAACCCCATCTTTTTGTG+TGG | - | chr7_3:47341821-47341840 | None:intergenic | 35.0% |
| GCAAATGTGGCAAATATTGT+AGG | + | chr7_3:47342198-47342217 | Msa1106770:intron | 35.0% | |
| GGGAAAATGCCAAAATTGTT+AGG | + | chr7_3:47342263-47342282 | Msa1106770:intron | 35.0% | |
| AAATGCCAAAATTGTTAGGC+CGG | + | chr7_3:47342267-47342286 | Msa1106770:intron | 35.0% | |
| ! | CTTACAGAATGATGATGAAG+GGG | + | chr7_3:47342687-47342706 | Msa1106770:intron | 35.0% |
| GGACAAGTTATAGCTATTGA+TGG | + | chr7_3:47342823-47342842 | Msa1106770:CDS | 35.0% | |
| CAAGTTATAGCTATTGATGG+AGG | + | chr7_3:47342826-47342845 | Msa1106770:CDS | 35.0% | |
| ! | TATTCATCTAGGGTTATAGG+AGG | - | chr7_3:47342905-47342924 | None:intergenic | 35.0% |
| TCTTGATTGACATTGTTGGT+TGG | + | chr7_3:47342963-47342982 | Msa1106770:three_prime_UTR | 35.0% | |
| ! | TATAAAGATAATGGCCATGG+AGG | - | chr7_3:47342990-47343009 | None:intergenic | 35.0% |
| AACAAAGCTAAGCAGCTTCA+AGG | + | chr7_3:47337387-47337406 | Msa1106770:CDS | 40.0% | |
| GCAGCTTCAAGGATAAAAGA+TGG | + | chr7_3:47337398-47337417 | Msa1106770:CDS | 40.0% | |
| GATAAAAGATGGTCACTGCA+TGG | + | chr7_3:47337409-47337428 | Msa1106770:CDS | 40.0% | |
| AAGGAAATTACCCAATGCCT+CGG | - | chr7_3:47337462-47337481 | None:intergenic | 40.0% | |
| GTGGAAGAGTTAGCAGAATT+TGG | + | chr7_3:47337999-47338018 | Msa1106770:CDS | 40.0% | |
| TTTGGAAGAGTGGAGAAGTA+AGG | + | chr7_3:47338070-47338089 | Msa1106770:CDS | 40.0% | |
| TTGGAAGAGTGGAGAAGTAA+GGG | + | chr7_3:47338071-47338090 | Msa1106770:CDS | 40.0% | |
| ! | GGTATGCAAGTTGACACAAA+TGG | - | chr7_3:47338378-47338397 | None:intergenic | 40.0% |
| GGCTCCATAAACGGATAATA+TGG | - | chr7_3:47338470-47338489 | None:intergenic | 40.0% | |
| ! | ACCTTTTGTGGCTCCATAAA+CGG | - | chr7_3:47338479-47338498 | None:intergenic | 40.0% |
| TGTGTTTAGACACTGCAAAC+AGG | + | chr7_3:47338545-47338564 | Msa1106770:intron | 40.0% | |
| GTGTTTAGACACTGCAAACA+GGG | + | chr7_3:47338546-47338565 | Msa1106770:intron | 40.0% | |
| TGTTTAGACACTGCAAACAG+GGG | + | chr7_3:47338547-47338566 | Msa1106770:intron | 40.0% | |
| TGGCAGTAATTAACTGGAGA+GGG | - | chr7_3:47338639-47338658 | None:intergenic | 40.0% | |
| GTGATGTGGCAGTAATTAAC+TGG | - | chr7_3:47338645-47338664 | None:intergenic | 40.0% | |
| TGGCTTCAAGACTTCTTTGA+CGG | + | chr7_3:47338748-47338767 | Msa1106770:intron | 40.0% | |
| TCATTGTGGAGAAGGAAGAA+TGG | + | chr7_3:47339187-47339206 | Msa1106770:intron | 40.0% | |
| ! | TGGACCAAGACCAAGAATTT+TGG | + | chr7_3:47339271-47339290 | Msa1106770:intron | 40.0% |
| GAGAGAAAAGAAGAGAGAGA+AGG | + | chr7_3:47339342-47339361 | Msa1106770:intron | 40.0% | |
| ! | TGGACCATGACCAAGAATTT+TGG | - | chr7_3:47339393-47339412 | None:intergenic | 40.0% |
| TCGTCACCTTTCCGTTAAAA+TGG | - | chr7_3:47339460-47339479 | None:intergenic | 40.0% | |
| !! | ATTTTTGTCAACTGGCCTAG+TGG | + | chr7_3:47339518-47339537 | Msa1106770:intron | 40.0% |
| ! | TTGTATGAGCTCTAACCACT+AGG | - | chr7_3:47339536-47339555 | None:intergenic | 40.0% |
| ! | GTGAAAAAGTGGGGTATTTG+GGG | + | chr7_3:47339562-47339581 | Msa1106770:intron | 40.0% |
| TCAAATGAGCTAAACTCACG+GGG | + | chr7_3:47339618-47339637 | Msa1106770:intron | 40.0% | |
| ! | TTTTATCCACGGATATCCAC+GGG | - | chr7_3:47339714-47339733 | None:intergenic | 40.0% |
| GGATTTAATGGTATCTGCAC+CGG | + | chr7_3:47339914-47339933 | Msa1106770:intron | 40.0% | |
| ! | TAGCGGATATGGATATCTAC+CGG | - | chr7_3:47339936-47339955 | None:intergenic | 40.0% |
| CTCGACCACCACAAAAAAAA+AGG | - | chr7_3:47340074-47340093 | None:intergenic | 40.0% | |
| !!! | CTTTTTTTTTGTGGTGGTCG+AGG | + | chr7_3:47340072-47340091 | Msa1106770:intron | 40.0% |
| CGCGGATATCTCAAAATCTA+TGG | + | chr7_3:47340459-47340478 | Msa1106770:intron | 40.0% | |
| CTCCTACTTAGGGATGTAAA+TGG | - | chr7_3:47340589-47340608 | None:intergenic | 40.0% | |
| CATTTCTACGCTCCTACTTA+GGG | - | chr7_3:47340599-47340618 | None:intergenic | 40.0% | |
| TCATTTCTACGCTCCTACTT+AGG | - | chr7_3:47340600-47340619 | None:intergenic | 40.0% | |
| ! | CCACTCCTCTGAAAAAACAA+AGG | - | chr7_3:47340625-47340644 | None:intergenic | 40.0% |
| !!! | CCTTTGTTTTTTCAGAGGAG+TGG | + | chr7_3:47340622-47340641 | Msa1106770:intron | 40.0% |
| ! | CGAAGAACTTAGCATTGGAA+TGG | + | chr7_3:47340994-47341013 | Msa1106770:CDS | 40.0% |
| CATCACTCTTGCAATCAATC+AGG | + | chr7_3:47341066-47341085 | Msa1106770:CDS | 40.0% | |
| ! | GTTTGGTGGCTATGTTTGTT+TGG | - | chr7_3:47341296-47341315 | None:intergenic | 40.0% |
| ATGATTGCCGGAAAATCACA+TGG | + | chr7_3:47341480-47341499 | Msa1106770:intron | 40.0% | |
| ! | ATCGCAACCATGTGATTTTC+CGG | - | chr7_3:47341490-47341509 | None:intergenic | 40.0% |
| ! | GTCATGTGGTTGATATCTCA+TGG | - | chr7_3:47341575-47341594 | None:intergenic | 40.0% |
| AACCACATGACAAAAAGGTG+TGG | + | chr7_3:47341584-47341603 | Msa1106770:intron | 40.0% | |
| ! | AACCACACCTTTTTGTCATG+TGG | - | chr7_3:47341589-47341608 | None:intergenic | 40.0% |
| GTTCTGTTGTTGGCAAATCA+TGG | - | chr7_3:47341653-47341672 | None:intergenic | 40.0% | |
| CTTCCTTCCACACAAAAAGA+TGG | + | chr7_3:47341811-47341830 | Msa1106770:intron | 40.0% | |
| TCCTTCCACACAAAAAGATG+GGG | + | chr7_3:47341813-47341832 | Msa1106770:intron | 40.0% | |
| AAAATCACACACACAAGTGG+AGG | - | chr7_3:47342322-47342341 | None:intergenic | 40.0% | |
| ! | CAAACTATGGACTGTGTGTT+TGG | + | chr7_3:47342408-47342427 | Msa1106770:intron | 40.0% |
| TGTAGTGTCTCAAACACCTA+TGG | + | chr7_3:47342726-47342745 | Msa1106770:CDS | 40.0% | |
| GTAGTGTCTCAAACACCTAT+GGG | + | chr7_3:47342727-47342746 | Msa1106770:CDS | 40.0% | |
| GGTATGACTGCGTTAGTAAC+AGG | + | chr7_3:47337430-47337449 | Msa1106770:CDS | 45.0% | |
| ATGACTGCGTTAGTAACAGG+TGG | + | chr7_3:47337433-47337452 | Msa1106770:CDS | 45.0% | |
| AGGAAATTACCCAATGCCTC+GGG | - | chr7_3:47337461-47337480 | None:intergenic | 45.0% | |
| TGGAAGAGTGGAGAAGTAAG+GGG | + | chr7_3:47338072-47338091 | Msa1106770:CDS | 45.0% | |
| GTGTTTACTTCGTCCATTGC+TGG | + | chr7_3:47338430-47338449 | Msa1106770:CDS | 45.0% | |
| TCCGTTTATGGAGCCACAAA+AGG | + | chr7_3:47338475-47338494 | Msa1106770:CDS | 45.0% | |
| GTGGCAGTAATTAACTGGAG+AGG | - | chr7_3:47338640-47338659 | None:intergenic | 45.0% | |
| ! | CAAGAGAGTGCAGTGAATGT+TGG | + | chr7_3:47338728-47338747 | Msa1106770:intron | 45.0% |
| GTAGTGAGTCCTACACTTAG+TGG | + | chr7_3:47338950-47338969 | Msa1106770:intron | 45.0% | |
| ATGTGGGATCCACTAAGTGT+AGG | - | chr7_3:47338962-47338981 | None:intergenic | 45.0% | |
| GTCCACACAAGTGTTTCTCT+TGG | + | chr7_3:47339408-47339427 | Msa1106770:intron | 45.0% | |
| CACCAAGAGAAACACTTGTG+TGG | - | chr7_3:47339413-47339432 | None:intergenic | 45.0% | |
| GGTGACGAACATATAAGAGG+TGG | + | chr7_3:47339472-47339491 | Msa1106770:intron | 45.0% | |
| GTTCATGGTAAGAGTAGGGA+TGG | + | chr7_3:47339673-47339692 | Msa1106770:intron | 45.0% | |
| GCAAAAAAAATTCGCACCCG+TGG | + | chr7_3:47339695-47339714 | Msa1106770:intron | 45.0% | |
| ! | TCCATGGGGGATTTTATCCA+CGG | - | chr7_3:47339725-47339744 | None:intergenic | 45.0% |
| GATAAAATCCCCCATGGACA+CGG | + | chr7_3:47339727-47339746 | Msa1106770:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+CGG | - | chr7_3:47340133-47340152 | None:intergenic | 45.0% |
| TCTTGTGAGCTTAGCTCAGT+TGG | - | chr7_3:47340138-47340157 | None:intergenic | 45.0% | |
| ATGGTATCTGCATAAACCCG+CGG | + | chr7_3:47340441-47340460 | Msa1106770:intron | 45.0% | |
| AACGGTTATCCGCGTAGATA+TGG | + | chr7_3:47340493-47340512 | Msa1106770:intron | 45.0% | |
| TGCAAGAGTGATGTCTTGAC+AGG | - | chr7_3:47341059-47341078 | None:intergenic | 45.0% | |
| GTCAGGTGTTCATCTTGGTT+AGG | - | chr7_3:47341631-47341650 | None:intergenic | 45.0% | |
| TCATGGTCAGGTGTTCATCT+TGG | - | chr7_3:47341636-47341655 | None:intergenic | 45.0% | |
| GTTGTTGGCAAATCATGGTC+AGG | - | chr7_3:47341648-47341667 | None:intergenic | 45.0% | |
| ! | ACCCCATCTTTTTGTGTGGA+AGG | - | chr7_3:47341817-47341836 | None:intergenic | 45.0% |
| ! | ACTATGGACTGTGTGTTTGG+AGG | + | chr7_3:47342411-47342430 | Msa1106770:intron | 45.0% |
| GAAGGGGTTGAAACTGTAGA+TGG | + | chr7_3:47342703-47342722 | Msa1106770:CDS | 45.0% | |
| TCAAACACCTATGGGTCGTA+TGG | + | chr7_3:47342735-47342754 | Msa1106770:CDS | 45.0% | |
| CAAACACCTATGGGTCGTAT+GGG | + | chr7_3:47342736-47342755 | Msa1106770:CDS | 45.0% | |
| TGCAGCAGGAAGACAAAGAA+AGG | - | chr7_3:47342791-47342810 | None:intergenic | 45.0% | |
| !! | AATTATTTACATAAAAAAAA+GGG | - | chr7_3:47337598-47337617 | None:intergenic | 5.0% |
| !!! | ATTTTTAAGTAATTAAATTT+TGG | - | chr7_3:47338612-47338631 | None:intergenic | 5.0% |
| !! | AAATTTAATTACTTAAAAAT+TGG | + | chr7_3:47338612-47338631 | Msa1106770:intron | 5.0% |
| !! | AATAATGTTAAATATTTATT+TGG | + | chr7_3:47339642-47339661 | Msa1106770:intron | 5.0% |
| !!! | CTTTATTTTTATTAAATATA+AGG | + | chr7_3:47340269-47340288 | Msa1106770:intron | 5.0% |
| !!! | TTTAATTTAAATAATTCAAA+TGG | - | chr7_3:47340862-47340881 | None:intergenic | 5.0% |
| TTAGTAACAGGTGGAACCCG+AGG | + | chr7_3:47337442-47337461 | Msa1106770:CDS | 50.0% | |
| TCCGTGGATAAAATCCCCCA+TGG | + | chr7_3:47339721-47339740 | Msa1106770:intron | 50.0% | |
| TATCTGATCCGTGTCCATGG+GGG | - | chr7_3:47339738-47339757 | None:intergenic | 50.0% | |
| GTATCTGATCCGTGTCCATG+GGG | - | chr7_3:47339739-47339758 | None:intergenic | 50.0% | |
| GGTATCTGATCCGTGTCCAT+GGG | - | chr7_3:47339740-47339759 | None:intergenic | 50.0% | |
| AGGTATCTGATCCGTGTCCA+TGG | - | chr7_3:47339741-47339760 | None:intergenic | 50.0% | |
| GCGGGTTTATGCAGATACCA+TGG | - | chr7_3:47340442-47340461 | None:intergenic | 50.0% | |
| CTACGCGGATAACCGTTTAG+CGG | - | chr7_3:47340490-47340509 | None:intergenic | 50.0% | |
| AGTGATGTCTTGACAGGTCC+AGG | - | chr7_3:47341053-47341072 | None:intergenic | 50.0% | |
| TCCAGAAGTCCTAGCTCAAC+TGG | + | chr7_3:47342242-47342261 | Msa1106770:intron | 50.0% | |
| CCAGAAGTCCTAGCTCAACT+GGG | + | chr7_3:47342243-47342262 | Msa1106770:intron | 50.0% | |
| ! | GGCATTTTCCCAGTTGAGCT+AGG | - | chr7_3:47342254-47342273 | None:intergenic | 50.0% |
| ! | GGCATCCGGCCTAACAATTT+TGG | - | chr7_3:47342275-47342294 | None:intergenic | 50.0% |
| ! | ACACACACAAGTGGAGGTAC+CGG | - | chr7_3:47342316-47342335 | None:intergenic | 50.0% |
| CCAGTGATGTATGATGCAGC+AGG | - | chr7_3:47342805-47342824 | None:intergenic | 50.0% | |
| CCTGCTGCATCATACATCAC+TGG | + | chr7_3:47342802-47342821 | Msa1106770:CDS | 50.0% | |
| ! | CATTGTTGGTTGGACCTCCA+TGG | + | chr7_3:47342973-47342992 | Msa1106770:three_prime_UTR | 50.0% |
| CCCAGTTGAGCTAGGACTTC+TGG | - | chr7_3:47342246-47342265 | None:intergenic | 55.0% | |
| !! | ACACACAAGTGGAGGTACCG+GGG | - | chr7_3:47342314-47342333 | None:intergenic | 55.0% |
| !! | CACACACAAGTGGAGGTACC+GGG | - | chr7_3:47342315-47342334 | None:intergenic | 55.0% |
| ACAGGTGGAACCCGAGGCAT+TGG | + | chr7_3:47337448-47337467 | Msa1106770:CDS | 60.0% | |
| ! | CAGGTGGAACCCGAGGCATT+GGG | + | chr7_3:47337449-47337468 | Msa1106770:CDS | 60.0% |
| TTCGCACCCGTGGATATCCG+TGG | + | chr7_3:47339705-47339724 | Msa1106770:intron | 60.0% | |
| CGTGCAAATGCTGTGGCACC+TGG | + | chr7_3:47341032-47341051 | Msa1106770:CDS | 60.0% | |
| GGCTCTCCCATACGACCCAT+AGG | - | chr7_3:47342745-47342764 | None:intergenic | 60.0% | |
| !! | AGGTACCGGGGTTCGAACCC+CGG | - | chr7_3:47342302-47342321 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 47337297 | 47343053 | 47337297 | ID=Msa1106770;Name=Msa1106770 |
| chr7_3 | mRNA | 47337297 | 47343053 | 47337297 | ID=Msa1106770-mRNA-1;Parent=Msa1106770;Name=Msa1106770-mRNA-1;_AED=0.31;_eAED=0.31;_QI=82|1|1|1|1|1|5|192|265 |
| chr7_3 | exon | 47337297 | 47337470 | 47337297 | ID=Msa1106770-mRNA-1:exon:9654;Parent=Msa1106770-mRNA-1 |
| chr7_3 | exon | 47337989 | 47338196 | 47337989 | ID=Msa1106770-mRNA-1:exon:9655;Parent=Msa1106770-mRNA-1 |
| chr7_3 | exon | 47338280 | 47338496 | 47338280 | ID=Msa1106770-mRNA-1:exon:9656;Parent=Msa1106770-mRNA-1 |
| chr7_3 | exon | 47340976 | 47341088 | 47340976 | ID=Msa1106770-mRNA-1:exon:9657;Parent=Msa1106770-mRNA-1 |
| chr7_3 | exon | 47342694 | 47343053 | 47342694 | ID=Msa1106770-mRNA-1:exon:9658;Parent=Msa1106770-mRNA-1 |
| chr7_3 | five_prime_UTR | 47337297 | 47337378 | 47337297 | ID=Msa1106770-mRNA-1:five_prime_utr;Parent=Msa1106770-mRNA-1 |
| chr7_3 | CDS | 47337379 | 47337470 | 47337379 | ID=Msa1106770-mRNA-1:cds;Parent=Msa1106770-mRNA-1 |
| chr7_3 | CDS | 47337989 | 47338196 | 47337989 | ID=Msa1106770-mRNA-1:cds;Parent=Msa1106770-mRNA-1 |
| chr7_3 | CDS | 47338280 | 47338496 | 47338280 | ID=Msa1106770-mRNA-1:cds;Parent=Msa1106770-mRNA-1 |
| chr7_3 | CDS | 47340976 | 47341088 | 47340976 | ID=Msa1106770-mRNA-1:cds;Parent=Msa1106770-mRNA-1 |
| chr7_3 | CDS | 47342694 | 47342861 | 47342694 | ID=Msa1106770-mRNA-1:cds;Parent=Msa1106770-mRNA-1 |
| chr7_3 | three_prime_UTR | 47342862 | 47343053 | 47342862 | ID=Msa1106770-mRNA-1:three_prime_utr;Parent=Msa1106770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
