Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150190 | KEH22973.1 | 92.830 | 265 | 19 | 0 | 1 | 265 | 1 | 265 | 0.0 | 517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150190 | sp|P50162|TRN1_DATST | 57.249 | 269 | 111 | 2 | 1 | 265 | 1 | 269 | 7.40e-111 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150190 | A0A072U1F3 | 92.830 | 265 | 19 | 0 | 1 | 265 | 1 | 265 | 0.0 | 517 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0643020 | Msa1150190 | -0.801704 | 7.941900e-49 | -8.615850e-47 |
| Msa1022610 | Msa1150190 | 0.847953 | 8.342965e-60 | -8.615850e-47 |
| Msa1061470 | Msa1150190 | 0.940759 | 1.345924e-100 | -8.615850e-47 |
| Msa1106770 | Msa1150190 | 0.869157 | 3.822077e-66 | -8.615850e-47 |
| Msa1150190 | Msa1317710 | 0.818627 | 1.776269e-52 | -8.615850e-47 |
| Msa0574720 | Msa1150190 | 0.804121 | 2.514885e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150190 | MtrunA17_Chr7g0239451 | 88.346 | 266 | 30 | 1 | 1 | 265 | 1 | 266 | 2.11e-180 | 496 |
| Msa1150190 | MtrunA17_Chr7g0239511 | 75.472 | 265 | 64 | 1 | 1 | 264 | 1 | 265 | 7.78e-149 | 416 |
| Msa1150190 | MtrunA17_Chr7g0239501 | 75.094 | 265 | 65 | 1 | 1 | 264 | 1 | 265 | 1.52e-144 | 405 |
| Msa1150190 | MtrunA17_Chr7g0239461 | 75.472 | 265 | 16 | 1 | 1 | 265 | 1 | 216 | 3.90e-141 | 395 |
| Msa1150190 | MtrunA17_Chr7g0239491 | 67.547 | 265 | 85 | 1 | 1 | 265 | 1 | 264 | 4.46e-137 | 386 |
| Msa1150190 | MtrunA17_Chr7g0239481 | 70.455 | 264 | 76 | 2 | 1 | 263 | 1 | 263 | 2.31e-136 | 385 |
| Msa1150190 | MtrunA17_Chr4g0032141 | 58.661 | 254 | 102 | 1 | 11 | 264 | 51 | 301 | 2.80e-111 | 323 |
| Msa1150190 | MtrunA17_Chr3g0112151 | 59.316 | 263 | 102 | 2 | 3 | 264 | 73 | 331 | 4.16e-108 | 316 |
| Msa1150190 | MtrunA17_Chr3g0112261 | 55.814 | 258 | 111 | 1 | 7 | 264 | 10 | 264 | 1.30e-103 | 302 |
| Msa1150190 | MtrunA17_Chr3g0112271 | 55.894 | 263 | 113 | 1 | 2 | 264 | 3 | 262 | 4.93e-102 | 298 |
| Msa1150190 | MtrunA17_Chr3g0112171 | 57.831 | 249 | 102 | 1 | 16 | 264 | 15 | 260 | 5.31e-102 | 298 |
| Msa1150190 | MtrunA17_Chr3g0112141 | 58.000 | 250 | 102 | 1 | 16 | 265 | 17 | 263 | 4.44e-100 | 293 |
| Msa1150190 | MtrunA17_Chr4g0032181 | 54.506 | 233 | 103 | 1 | 32 | 264 | 17 | 246 | 1.95e-91 | 270 |
| Msa1150190 | MtrunA17_Chr4g0075531 | 34.510 | 255 | 157 | 6 | 12 | 265 | 5 | 250 | 2.47e-34 | 124 |
| Msa1150190 | MtrunA17_Chr4g0074511 | 33.203 | 256 | 156 | 6 | 16 | 262 | 40 | 289 | 2.01e-27 | 107 |
| Msa1150190 | MtrunA17_Chr7g0272961 | 31.641 | 256 | 159 | 8 | 16 | 262 | 40 | 288 | 8.43e-27 | 105 |
| Msa1150190 | MtrunA17_Chr7g0259521 | 31.102 | 254 | 164 | 5 | 16 | 263 | 6 | 254 | 2.42e-26 | 103 |
| Msa1150190 | MtrunA17_Chr3g0122901 | 30.894 | 246 | 156 | 5 | 22 | 262 | 81 | 317 | 3.73e-26 | 104 |
| Msa1150190 | MtrunA17_Chr0c30g0494101 | 33.463 | 257 | 152 | 8 | 16 | 262 | 40 | 287 | 8.24e-26 | 102 |
| Msa1150190 | MtrunA17_Chr1g0191751 | 30.859 | 256 | 161 | 7 | 16 | 262 | 101 | 349 | 9.42e-26 | 103 |
| Msa1150190 | MtrunA17_Chr8g0357481 | 29.658 | 263 | 157 | 8 | 16 | 262 | 14 | 264 | 7.48e-25 | 100 |
| Msa1150190 | MtrunA17_Chr7g0259531 | 29.845 | 258 | 162 | 5 | 16 | 263 | 11 | 259 | 3.86e-24 | 97.8 |
| Msa1150190 | MtrunA17_Chr1g0182511 | 31.698 | 265 | 149 | 8 | 16 | 263 | 14 | 263 | 7.41e-24 | 97.1 |
| Msa1150190 | MtrunA17_Chr3g0112321 | 47.059 | 102 | 35 | 3 | 148 | 246 | 2 | 87 | 7.25e-21 | 84.3 |
| Msa1150190 | MtrunA17_Chr7g0249571 | 28.641 | 206 | 141 | 5 | 4 | 204 | 26 | 230 | 2.01e-19 | 85.9 |
| Msa1150190 | MtrunA17_Chr4g0028911 | 26.459 | 257 | 177 | 7 | 16 | 264 | 11 | 263 | 9.45e-19 | 83.6 |
| Msa1150190 | MtrunA17_Chr4g0028921 | 26.848 | 257 | 176 | 7 | 16 | 264 | 11 | 263 | 2.36e-18 | 82.4 |
| Msa1150190 | MtrunA17_Chr4g0026001 | 30.769 | 273 | 165 | 11 | 1 | 264 | 1 | 258 | 5.40e-18 | 81.3 |
| Msa1150190 | MtrunA17_Chr7g0244061 | 29.268 | 287 | 170 | 10 | 3 | 265 | 18 | 295 | 8.53e-18 | 81.3 |
| Msa1150190 | MtrunA17_Chr8g0355281 | 30.435 | 207 | 126 | 6 | 22 | 215 | 75 | 276 | 6.52e-17 | 79.3 |
| Msa1150190 | MtrunA17_Chr6g0459351 | 28.889 | 270 | 176 | 9 | 1 | 263 | 1 | 261 | 4.46e-16 | 75.9 |
| Msa1150190 | MtrunA17_Chr4g0025971 | 29.528 | 254 | 165 | 9 | 16 | 264 | 14 | 258 | 4.99e-16 | 75.9 |
| Msa1150190 | MtrunA17_Chr4g0044131 | 26.820 | 261 | 168 | 9 | 16 | 265 | 8 | 256 | 7.91e-16 | 75.5 |
| Msa1150190 | MtrunA17_Chr6g0459261 | 28.519 | 270 | 177 | 9 | 1 | 263 | 13 | 273 | 3.51e-15 | 73.6 |
| Msa1150190 | MtrunA17_Chr6g0459281 | 27.239 | 268 | 183 | 7 | 1 | 263 | 1 | 261 | 4.43e-15 | 73.2 |
| Msa1150190 | MtrunA17_Chr4g0025981 | 27.668 | 253 | 161 | 8 | 18 | 261 | 43 | 282 | 4.91e-15 | 73.6 |
| Msa1150190 | MtrunA17_Chr7g0266981 | 29.057 | 265 | 173 | 8 | 7 | 264 | 4 | 260 | 1.48e-13 | 68.9 |
| Msa1150190 | MtrunA17_Chr4g0044111 | 29.057 | 265 | 173 | 8 | 7 | 264 | 4 | 260 | 1.49e-13 | 68.9 |
| Msa1150190 | MtrunA17_Chr7g0268591 | 28.409 | 264 | 164 | 9 | 16 | 265 | 33 | 285 | 3.72e-13 | 68.2 |
| Msa1150190 | MtrunA17_Chr7g0252031 | 27.740 | 292 | 171 | 12 | 3 | 265 | 8 | 288 | 4.57e-13 | 67.8 |
| Msa1150190 | MtrunA17_Chr3g0084871 | 30.268 | 261 | 164 | 7 | 16 | 264 | 16 | 270 | 5.54e-13 | 67.4 |
| Msa1150190 | MtrunA17_Chr6g0459271 | 27.407 | 270 | 180 | 9 | 1 | 263 | 1 | 261 | 8.26e-13 | 66.6 |
| Msa1150190 | MtrunA17_Chr7g0267011 | 28.497 | 193 | 123 | 7 | 16 | 201 | 8 | 192 | 1.26e-12 | 65.1 |
| Msa1150190 | MtrunA17_Chr6g0485711 | 27.536 | 207 | 129 | 5 | 22 | 208 | 184 | 389 | 2.61e-12 | 66.2 |
| Msa1150190 | MtrunA17_Chr7g0267001 | 25.882 | 255 | 160 | 10 | 16 | 265 | 8 | 238 | 5.68e-12 | 64.3 |
| Msa1150190 | MtrunA17_Chr6g0459331 | 26.394 | 269 | 157 | 9 | 16 | 263 | 13 | 261 | 1.07e-11 | 63.5 |
| Msa1150190 | MtrunA17_Chr4g0040371 | 26.792 | 265 | 168 | 7 | 16 | 265 | 19 | 272 | 2.52e-11 | 62.8 |
| Msa1150190 | MtrunA17_Chr6g0466681 | 29.070 | 172 | 108 | 5 | 18 | 181 | 66 | 231 | 5.05e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150190 | AT5G06060.1 | 59.843 | 254 | 99 | 1 | 11 | 264 | 4 | 254 | 1.05e-110 | 320 |
| Msa1150190 | AT1G07440.1 | 58.039 | 255 | 103 | 1 | 10 | 264 | 6 | 256 | 8.99e-106 | 308 |
| Msa1150190 | AT2G29320.1 | 60.547 | 256 | 96 | 3 | 11 | 264 | 7 | 259 | 2.31e-105 | 306 |
| Msa1150190 | AT2G29260.1 | 56.522 | 253 | 107 | 1 | 12 | 264 | 64 | 313 | 1.34e-104 | 306 |
| Msa1150190 | AT2G29300.1 | 59.608 | 255 | 99 | 2 | 11 | 264 | 2 | 253 | 5.63e-104 | 303 |
| Msa1150190 | AT2G29300.2 | 59.608 | 255 | 99 | 2 | 11 | 264 | 2 | 253 | 2.51e-103 | 302 |
| Msa1150190 | AT2G29340.2 | 59.055 | 254 | 101 | 1 | 11 | 264 | 2 | 252 | 1.40e-102 | 299 |
| Msa1150190 | AT2G29340.1 | 59.055 | 254 | 101 | 1 | 11 | 264 | 2 | 252 | 2.74e-102 | 300 |
| Msa1150190 | AT2G29290.2 | 56.693 | 254 | 107 | 1 | 11 | 264 | 2 | 252 | 1.37e-101 | 297 |
| Msa1150190 | AT2G29150.1 | 56.870 | 262 | 109 | 2 | 1 | 262 | 1 | 258 | 4.96e-100 | 293 |
| Msa1150190 | AT2G29310.1 | 57.087 | 254 | 106 | 1 | 11 | 264 | 2 | 252 | 8.06e-100 | 292 |
| Msa1150190 | AT2G29360.1 | 55.094 | 265 | 114 | 3 | 1 | 264 | 1 | 261 | 1.36e-99 | 292 |
| Msa1150190 | AT2G29330.1 | 57.480 | 254 | 105 | 2 | 11 | 264 | 2 | 252 | 1.08e-98 | 290 |
| Msa1150190 | AT1G07450.1 | 55.556 | 252 | 108 | 2 | 13 | 264 | 5 | 252 | 2.71e-98 | 288 |
| Msa1150190 | AT2G29350.1 | 56.078 | 255 | 108 | 1 | 10 | 264 | 9 | 259 | 7.45e-98 | 288 |
| Msa1150190 | AT2G30670.1 | 55.512 | 254 | 110 | 1 | 11 | 264 | 2 | 252 | 7.50e-98 | 287 |
| Msa1150190 | AT2G29370.1 | 54.651 | 258 | 113 | 2 | 8 | 264 | 7 | 261 | 5.74e-95 | 280 |
| Msa1150190 | AT2G29320.2 | 58.974 | 234 | 92 | 2 | 32 | 264 | 11 | 241 | 2.18e-93 | 276 |
| Msa1150190 | AT2G29290.1 | 54.310 | 232 | 103 | 1 | 33 | 264 | 7 | 235 | 4.19e-87 | 259 |
| Msa1150190 | AT2G29310.2 | 54.936 | 233 | 102 | 1 | 32 | 264 | 21 | 250 | 1.85e-85 | 256 |
| Msa1150190 | AT2G29350.3 | 54.018 | 224 | 99 | 1 | 41 | 264 | 2 | 221 | 8.60e-81 | 243 |
| Msa1150190 | AT2G29320.3 | 59.901 | 202 | 79 | 2 | 11 | 210 | 7 | 208 | 3.69e-80 | 240 |
| Msa1150190 | AT2G29340.3 | 58.706 | 201 | 83 | 0 | 11 | 211 | 2 | 202 | 6.92e-79 | 237 |
| Msa1150190 | AT2G29340.4 | 58.706 | 201 | 83 | 0 | 11 | 211 | 2 | 202 | 6.92e-79 | 237 |
| Msa1150190 | AT2G29350.2 | 55.721 | 201 | 89 | 0 | 10 | 210 | 9 | 209 | 1.99e-76 | 231 |
| Msa1150190 | AT2G29310.3 | 56.281 | 199 | 87 | 0 | 11 | 209 | 2 | 200 | 8.29e-76 | 229 |
| Msa1150190 | AT1G07440.2 | 56.213 | 169 | 74 | 0 | 10 | 178 | 6 | 174 | 2.32e-64 | 199 |
| Msa1150190 | AT2G29310.4 | 53.371 | 178 | 83 | 0 | 32 | 209 | 21 | 198 | 2.69e-61 | 192 |
| Msa1150190 | AT2G29170.1 | 62.500 | 96 | 35 | 1 | 8 | 102 | 7 | 102 | 9.51e-39 | 131 |
| Msa1150190 | AT4G05530.1 | 34.661 | 251 | 156 | 5 | 16 | 265 | 9 | 252 | 1.51e-34 | 125 |
| Msa1150190 | AT3G03980.1 | 32.342 | 269 | 166 | 4 | 7 | 263 | 5 | 269 | 1.21e-33 | 123 |
| Msa1150190 | AT3G05260.1 | 35.294 | 255 | 150 | 7 | 16 | 262 | 37 | 284 | 3.81e-32 | 120 |
| Msa1150190 | AT1G54870.1 | 33.984 | 256 | 153 | 7 | 16 | 262 | 82 | 330 | 8.12e-32 | 120 |
| Msa1150190 | AT1G54870.2 | 33.984 | 256 | 153 | 7 | 16 | 262 | 84 | 332 | 9.06e-32 | 120 |
| Msa1150190 | AT5G18210.1 | 32.946 | 258 | 159 | 5 | 15 | 263 | 7 | 259 | 8.50e-30 | 113 |
| Msa1150190 | AT4G13180.1 | 31.765 | 255 | 161 | 5 | 16 | 263 | 13 | 261 | 1.08e-27 | 107 |
| Msa1150190 | AT1G24360.1 | 32.794 | 247 | 150 | 7 | 22 | 262 | 80 | 316 | 4.80e-27 | 107 |
| Msa1150190 | AT5G18210.2 | 33.054 | 239 | 146 | 5 | 15 | 244 | 7 | 240 | 1.39e-25 | 102 |
| Msa1150190 | AT3G04000.1 | 32.714 | 269 | 164 | 4 | 7 | 262 | 5 | 269 | 9.43e-25 | 100 |
| Msa1150190 | AT3G12800.1 | 28.462 | 260 | 165 | 6 | 16 | 262 | 10 | 261 | 2.69e-24 | 99.4 |
| Msa1150190 | AT1G63380.1 | 26.953 | 256 | 178 | 7 | 16 | 264 | 17 | 270 | 5.36e-19 | 84.7 |
| Msa1150190 | AT1G63380.3 | 26.953 | 256 | 178 | 7 | 16 | 264 | 15 | 268 | 5.76e-19 | 84.3 |
| Msa1150190 | AT3G03330.1 | 30.808 | 198 | 130 | 5 | 12 | 203 | 37 | 233 | 6.40e-19 | 85.1 |
| Msa1150190 | AT1G63380.4 | 26.953 | 256 | 178 | 7 | 16 | 264 | 19 | 272 | 6.67e-19 | 84.3 |
| Msa1150190 | AT1G63380.2 | 26.953 | 256 | 178 | 7 | 16 | 264 | 22 | 275 | 9.50e-19 | 84.0 |
| Msa1150190 | AT1G62610.2 | 26.172 | 256 | 180 | 7 | 16 | 264 | 13 | 266 | 2.73e-18 | 82.4 |
| Msa1150190 | AT1G62610.3 | 26.172 | 256 | 180 | 7 | 16 | 264 | 15 | 268 | 2.80e-18 | 82.4 |
| Msa1150190 | AT1G62610.1 | 26.172 | 256 | 180 | 7 | 16 | 264 | 14 | 267 | 3.09e-18 | 82.4 |
| Msa1150190 | AT1G62610.4 | 26.172 | 256 | 180 | 7 | 16 | 264 | 19 | 272 | 3.15e-18 | 82.4 |
| Msa1150190 | AT3G55310.1 | 26.255 | 259 | 175 | 8 | 16 | 264 | 17 | 269 | 2.43e-17 | 80.1 |
| Msa1150190 | AT3G55290.1 | 27.099 | 262 | 169 | 9 | 16 | 264 | 18 | 270 | 4.30e-17 | 79.3 |
| Msa1150190 | AT3G55290.2 | 27.099 | 262 | 169 | 9 | 16 | 264 | 17 | 269 | 4.55e-17 | 79.3 |
| Msa1150190 | AT3G46170.1 | 27.132 | 258 | 174 | 8 | 16 | 264 | 26 | 278 | 1.83e-16 | 77.8 |
| Msa1150190 | AT3G42960.1 | 29.889 | 271 | 161 | 10 | 11 | 265 | 5 | 262 | 1.93e-16 | 77.4 |
| Msa1150190 | AT5G04900.1 | 28.643 | 199 | 125 | 6 | 22 | 208 | 83 | 276 | 8.35e-16 | 76.6 |
| Msa1150190 | AT3G47350.2 | 30.570 | 193 | 123 | 6 | 18 | 205 | 46 | 232 | 5.55e-15 | 73.9 |
| Msa1150190 | AT3G47350.1 | 30.570 | 193 | 123 | 6 | 18 | 205 | 46 | 232 | 5.65e-15 | 73.6 |
| Msa1150190 | AT5G50700.1 | 30.244 | 205 | 134 | 6 | 15 | 215 | 44 | 243 | 7.57e-15 | 73.9 |
| Msa1150190 | AT5G50600.1 | 30.244 | 205 | 134 | 6 | 15 | 215 | 44 | 243 | 7.57e-15 | 73.9 |
| Msa1150190 | AT2G17845.1 | 25.869 | 259 | 175 | 9 | 16 | 262 | 47 | 300 | 1.02e-14 | 73.2 |
| Msa1150190 | AT3G51680.1 | 27.305 | 282 | 183 | 9 | 1 | 265 | 20 | 296 | 1.76e-14 | 72.4 |
| Msa1150190 | AT4G03140.1 | 26.820 | 261 | 172 | 9 | 16 | 265 | 78 | 330 | 2.06e-14 | 72.4 |
| Msa1150190 | AT3G26760.1 | 28.185 | 259 | 172 | 7 | 16 | 264 | 36 | 290 | 3.10e-14 | 71.6 |
| Msa1150190 | AT4G13250.1 | 27.092 | 251 | 157 | 7 | 22 | 247 | 165 | 414 | 7.08e-14 | 71.6 |
| Msa1150190 | AT2G47130.1 | 28.409 | 264 | 157 | 9 | 16 | 264 | 6 | 252 | 1.25e-13 | 69.3 |
| Msa1150190 | AT1G49670.1 | 30.493 | 223 | 132 | 10 | 18 | 224 | 6 | 221 | 1.62e-13 | 70.5 |
| Msa1150190 | AT3G47360.1 | 30.366 | 191 | 122 | 6 | 20 | 205 | 49 | 233 | 1.78e-13 | 69.3 |
| Msa1150190 | AT1G49670.2 | 30.493 | 223 | 132 | 10 | 18 | 224 | 6 | 221 | 2.20e-13 | 70.1 |
| Msa1150190 | AT5G50590.2 | 28.646 | 192 | 126 | 6 | 16 | 202 | 45 | 230 | 3.79e-13 | 67.8 |
| Msa1150190 | AT5G50690.2 | 28.646 | 192 | 126 | 6 | 16 | 202 | 45 | 230 | 3.79e-13 | 67.8 |
| Msa1150190 | AT3G03350.2 | 30.636 | 173 | 107 | 4 | 36 | 203 | 188 | 352 | 3.91e-13 | 68.9 |
| Msa1150190 | AT5G50590.1 | 29.070 | 172 | 118 | 4 | 16 | 185 | 45 | 214 | 4.75e-13 | 68.2 |
| Msa1150190 | AT5G50690.1 | 29.070 | 172 | 118 | 4 | 16 | 185 | 45 | 214 | 4.75e-13 | 68.2 |
| Msa1150190 | AT1G67730.1 | 29.064 | 203 | 131 | 5 | 17 | 210 | 50 | 248 | 2.17e-12 | 66.2 |
| Msa1150190 | AT3G59710.3 | 35.766 | 137 | 79 | 4 | 13 | 145 | 13 | 144 | 9.99e-12 | 64.3 |
| Msa1150190 | AT4G13250.2 | 26.693 | 251 | 156 | 8 | 22 | 247 | 165 | 412 | 1.17e-11 | 64.7 |
| Msa1150190 | AT3G59710.2 | 35.766 | 137 | 79 | 4 | 13 | 145 | 42 | 173 | 1.81e-11 | 63.5 |
| Msa1150190 | AT4G09750.1 | 28.042 | 189 | 122 | 5 | 10 | 187 | 35 | 220 | 3.06e-11 | 63.2 |
| Msa1150190 | AT5G10050.1 | 27.128 | 188 | 130 | 3 | 22 | 208 | 11 | 192 | 5.79e-11 | 62.0 |
| Msa1150190 | AT3G59710.1 | 35.294 | 136 | 79 | 4 | 14 | 145 | 24 | 154 | 6.02e-11 | 62.0 |
Find 72 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCCATATTATCCGTTTA+TGG | 0.156544 | 7_4:+33213380 | Msa1150190:CDS |
| GTGGAAGAGTTAGCAGAATT+TGG | 0.185342 | 7_4:+33212919 | Msa1150190:CDS |
| AAACATAATATAGCAGATTT+TGG | 0.188046 | 7_4:+33212187 | Msa1150190:five_prime_UTR |
| CTTCTAAAACAATCTGGATA+TGG | 0.214489 | 7_4:+33213317 | Msa1150190:CDS |
| GGCTCCATAAACGGATAATA+TGG | 0.267329 | 7_4:-33213384 | None:intergenic |
| TAGATAGCTATGTGTTGATT+TGG | 0.301237 | 7_4:+33218316 | Msa1150190:exon |
| ATTATTACATTTATTCATCT+AGG | 0.330965 | 7_4:-33218368 | None:intergenic |
| GTGTTTACTTCGTCCATTGC+TGG | 0.353879 | 7_4:+33213347 | Msa1150190:CDS |
| TTTGATTATAATAAATTTGA+AGG | 0.354480 | 7_4:-33218467 | None:intergenic |
| ACTAGTGATGATATCTCTTT+AGG | 0.358021 | 7_4:-33218220 | None:intergenic |
| GAAGGGGTTGAAGCTGTAGA+TGG | 0.358544 | 7_4:+33218160 | Msa1150190:CDS |
| AGTAAGGGGTTTAATGTAAC+AGG | 0.367595 | 7_4:+33213006 | Msa1150190:CDS |
| AGAAGATATTAATAAATGTT+TGG | 0.368006 | 7_4:+33212972 | Msa1150190:CDS |
| TTGAAGGAATATAAAGATAA+TGG | 0.374913 | 7_4:-33218451 | None:intergenic |
| ACTGTTTCTTCTATCTTTCA+AGG | 0.382915 | 7_4:+33213078 | Msa1150190:CDS |
| CATCACTCTTGCAATCAATC+AGG | 0.389523 | 7_4:+33215737 | Msa1150190:CDS |
| GGTATGACTGCGTTAGTAAC+AGG | 0.416451 | 7_4:+33212291 | Msa1150190:CDS |
| TACCCTCTTCTAAAACAATC+TGG | 0.416961 | 7_4:+33213311 | Msa1150190:CDS |
| AACAAAGTTAAGCAGCTTCA+AGG | 0.417397 | 7_4:+33212248 | Msa1150190:CDS |
| TTAATAAATGTTTGGAAGAG+TGG | 0.419268 | 7_4:+33212980 | Msa1150190:CDS |
| TTCTAAAACAATCTGGATAT+GGG | 0.427451 | 7_4:+33213318 | Msa1150190:CDS |
| CTACTTTACAAACAAAATCA+AGG | 0.435504 | 7_4:+33212163 | Msa1150190:five_prime_UTR |
| GAAGATATAAACACTACAAT+TGG | 0.437311 | 7_4:+33213248 | Msa1150190:CDS |
| TGAAGAACGCAAGAAACTAA+TGG | 0.439032 | 7_4:+33213053 | Msa1150190:CDS |
| TTTGGAAGAGTGGAGAAGTA+AGG | 0.445114 | 7_4:+33212990 | Msa1150190:CDS |
| GGACAAGTTATAGCTATTGA+TGG | 0.448377 | 7_4:+33218280 | Msa1150190:CDS |
| CGTGCAAATGCTGTGGCACC+TGG | 0.452656 | 7_4:+33215703 | Msa1150190:CDS |
| TTTATAACTAACATGACTGT+TGG | 0.455029 | 7_4:-33218395 | None:intergenic |
| ACAGGTGGAACCCGAGGCAT+TGG | 0.457383 | 7_4:+33212309 | Msa1150190:CDS |
| AAGGGGTTGAAGCTGTAGAT+GGG | 0.458696 | 7_4:+33218161 | Msa1150190:CDS |
| TAAAACACCTATGGGTCGTA+TGG | 0.479750 | 7_4:+33218192 | Msa1150190:CDS |
| GGTAGTGTCTAAAACACCTA+TGG | 0.481462 | 7_4:+33218183 | Msa1150190:CDS |
| TCCGTTTATGGAGCCACAAA+AGG | 0.482063 | 7_4:+33213392 | Msa1150190:CDS |
| TAAATCTTGATTGACATTGT+TGG | 0.482308 | 7_4:+33218414 | Msa1150190:three_prime_UTR |
| TTGGAAGAGTGGAGAAGTAA+GGG | 0.482971 | 7_4:+33212991 | Msa1150190:CDS |
| TTATTACATTTATTCATCTA+GGG | 0.488500 | 7_4:-33218367 | None:intergenic |
| TTATAACTAACATGACTGTT+GGG | 0.491530 | 7_4:-33218394 | None:intergenic |
| CGAAGAACTTAGCATTGGAA+TGG | 0.492016 | 7_4:+33215665 | Msa1150190:CDS |
| ATAAAATAACATGAGCGAAA+AGG | 0.500128 | 7_4:-33218502 | None:intergenic |
| CTCAAACAGAATGATGATGA+AGG | 0.503335 | 7_4:+33218142 | Msa1150190:intron |
| AGTGATGTCTTGACAGGTCC+AGG | 0.505435 | 7_4:-33215721 | None:intergenic |
| CATTGTTGGTTGGACCTCCA+TGG | 0.509252 | 7_4:+33218428 | Msa1150190:three_prime_UTR |
| GCTCCATAAACGGATAATAT+GGG | 0.509272 | 7_4:-33213383 | None:intergenic |
| ATGAATTAGGTACGCAATTG+TGG | 0.509522 | 7_4:+33212900 | Msa1150190:intron |
| TGCAGCTGGAAGACAAAGAA+AGG | 0.533407 | 7_4:-33218245 | None:intergenic |
| CAGGTGGAACCCGAGGCATT+GGG | 0.536116 | 7_4:+33212310 | Msa1150190:CDS |
| ATTCACGAAGAACTTAGCAT+TGG | 0.539967 | 7_4:+33215660 | Msa1150190:CDS |
| GAAGAACTTAGCATTGGAAT+GGG | 0.540363 | 7_4:+33215666 | Msa1150190:CDS |
| AGGAAATTACCCAATGCCTC+GGG | 0.542864 | 7_4:-33212319 | None:intergenic |
| AAGGAAATTACCCAATGCCT+CGG | 0.548009 | 7_4:-33212320 | None:intergenic |
| GAATATAAAGATAATGGCCA+TGG | 0.556357 | 7_4:-33218445 | None:intergenic |
| TCAAACAGAATGATGATGAA+GGG | 0.556876 | 7_4:+33218143 | Msa1150190:intron |
| TGGAAGAGTGGAGAAGTAAG+GGG | 0.558528 | 7_4:+33212992 | Msa1150190:CDS |
| TCTTGATTGACATTGTTGGT+TGG | 0.577182 | 7_4:+33218418 | Msa1150190:three_prime_UTR |
| TGCAAGAGTGATGTCTTGAC+AGG | 0.582780 | 7_4:-33215727 | None:intergenic |
| AATAGCTTGTAAACCAGCAA+TGG | 0.586264 | 7_4:-33213360 | None:intergenic |
| ATCACTCTTGCAATCAATCA+GGG | 0.588577 | 7_4:+33215738 | Msa1150190:CDS |
| CCAGCTGCATCATACATCAC+TGG | 0.589548 | 7_4:+33218259 | Msa1150190:CDS |
| GTAGTGTCTAAAACACCTAT+GGG | 0.593768 | 7_4:+33218184 | Msa1150190:CDS |
| CCAGTGATGTATGATGCAGC+TGG | 0.594446 | 7_4:-33218259 | None:intergenic |
| AAAACACCTATGGGTCGTAT+GGG | 0.594881 | 7_4:+33218193 | Msa1150190:CDS |
| GGTATGCAAGTTGACACAAA+TGG | 0.595523 | 7_4:-33213292 | None:intergenic |
| CAAGTTATAGCTATTGATGG+AGG | 0.616648 | 7_4:+33218283 | Msa1150190:CDS |
| CAAACAGAATGATGATGAAG+GGG | 0.617870 | 7_4:+33218144 | Msa1150190:intron |
| GGCTCTCCCATACGACCCAT+AGG | 0.618378 | 7_4:-33218199 | None:intergenic |
| GATAAGAGATGGTCACTGCA+TGG | 0.623918 | 7_4:+33212270 | Msa1150190:CDS |
| GCAGCTTCAAGGATAAGAGA+TGG | 0.635737 | 7_4:+33212259 | Msa1150190:CDS |
| AGGGGTTGAAGCTGTAGATG+GGG | 0.638990 | 7_4:+33218162 | Msa1150190:CDS |
| TTAGTAACAGGTGGAACCCG+AGG | 0.644580 | 7_4:+33212303 | Msa1150190:CDS |
| TATAAAGATAATGGCCATGG+AGG | 0.649634 | 7_4:-33218442 | None:intergenic |
| TAATATTCGTGCAAATGCTG+TGG | 0.649939 | 7_4:+33215696 | Msa1150190:CDS |
| ATGACTGCGTTAGTAACAGG+TGG | 0.678039 | 7_4:+33212294 | Msa1150190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATGTAAATAATTG+TGG | + | chr7_4:33212461-33212480 | Msa1150190:intron | 10.0% |
| !!! | TTTCAATTGATTTAATTTAT+AGG | + | chr7_4:33212674-33212693 | Msa1150190:intron | 10.0% |
| !!! | TTATTTTTCTATTATGAATT+AGG | + | chr7_4:33212887-33212906 | Msa1150190:intron | 10.0% |
| !! | ATAATTTAATTAGATAAAGA+AGG | + | chr7_4:33213783-33213802 | Msa1150190:intron | 10.0% |
| !! | TAATTTAATTAGATAAAGAA+GGG | + | chr7_4:33213784-33213803 | Msa1150190:intron | 10.0% |
| !! | TTATACATAAATATCTATTA+AGG | - | chr7_4:33214517-33214536 | None:intergenic | 10.0% |
| !! | TAATTTACAATATTTAATAG+CGG | - | chr7_4:33214622-33214641 | None:intergenic | 10.0% |
| !!! | CTTTATTTTTATTAAATGTA+AGG | + | chr7_4:33214937-33214956 | Msa1150190:intron | 10.0% |
| !!! | AAATTTTATTATAGAGAAAA+AGG | + | chr7_4:33215493-33215512 | Msa1150190:intron | 10.0% |
| !! | TCAAATATAACAAATATTAT+GGG | - | chr7_4:33217697-33217716 | None:intergenic | 10.0% |
| !! | ATCAAATATAACAAATATTA+TGG | - | chr7_4:33217698-33217717 | None:intergenic | 10.0% |
| !! | ATTTATGAAAATAAACTTAA+TGG | + | chr7_4:33218090-33218109 | Msa1150190:intron | 10.0% |
| !! | TTTGATTATAATAAATTTGA+AGG | - | chr7_4:33218470-33218489 | None:intergenic | 10.0% |
| !! | GGTTTCAATATATATATATA+TGG | + | chr7_4:33212482-33212501 | Msa1150190:intron | 15.0% |
| !!! | TTTTACTTAACAAATTCAAT+CGG | + | chr7_4:33212597-33212616 | Msa1150190:intron | 15.0% |
| !! | AAAGACTATATTCATTTAAT+TGG | - | chr7_4:33212829-33212848 | None:intergenic | 15.0% |
| !! | AGAAGATATTAATAAATGTT+TGG | + | chr7_4:33212972-33212991 | Msa1150190:CDS | 15.0% |
| !! | GAAAGAAAAAAAAAAATACA+TGG | - | chr7_4:33213127-33213146 | None:intergenic | 15.0% |
| !!! | TTTTATGTAGTTTTTCTTTT+AGG | + | chr7_4:33213175-33213194 | Msa1150190:intron | 15.0% |
| !!! | GTTTCATTGATTAAAAAAAT+AGG | + | chr7_4:33213418-33213437 | Msa1150190:intron | 15.0% |
| !!! | GAATGAAATTAATTTTCAAA+TGG | + | chr7_4:33214038-33214057 | Msa1150190:intron | 15.0% |
| !! | AAATATTTATTTGGCAATAT+TGG | + | chr7_4:33214406-33214425 | Msa1150190:intron | 15.0% |
| !!! | TTTTTTTAAAATCTTATCCA+TGG | + | chr7_4:33215093-33215112 | Msa1150190:intron | 15.0% |
| !! | ACTTCAAAATAATAGTTTAA+AGG | - | chr7_4:33215567-33215586 | None:intergenic | 15.0% |
| !! | CAAATTTAATTAATCAATTC+AGG | + | chr7_4:33215625-33215644 | Msa1150190:intron | 15.0% |
| !!! | TTGATTATCTTTATGTTTTT+TGG | - | chr7_4:33215990-33216009 | None:intergenic | 15.0% |
| !!! | GTTTTTCTTATGATTAATAT+AGG | - | chr7_4:33216060-33216079 | None:intergenic | 15.0% |
| !! | CAATAAAAAAAACAAATGTT+TGG | + | chr7_4:33216358-33216377 | Msa1150190:intron | 15.0% |
| !! | AAATTAATTTAATTCGTAGA+GGG | - | chr7_4:33216484-33216503 | None:intergenic | 15.0% |
| !! | AAAATTAATTTAATTCGTAG+AGG | - | chr7_4:33216485-33216504 | None:intergenic | 15.0% |
| !!! | CGAATTAAATTAATTTTAGT+TGG | + | chr7_4:33216488-33216507 | Msa1150190:intron | 15.0% |
| !!! | TTAAATTAATTTTAGTTGGA+AGG | + | chr7_4:33216492-33216511 | Msa1150190:intron | 15.0% |
| !! | TTATTACATTTATTCATCTA+GGG | - | chr7_4:33218370-33218389 | None:intergenic | 15.0% |
| !! | ATTATTACATTTATTCATCT+AGG | - | chr7_4:33218371-33218390 | None:intergenic | 15.0% |
| !!! | AAACATAATATAGCAGATTT+TGG | + | chr7_4:33212187-33212206 | Msa1150190:five_prime_UTR | 20.0% |
| !! | GTAGTCATAAAGAAAAAAAA+TGG | + | chr7_4:33212221-33212240 | Msa1150190:exon | 20.0% |
| !!! | AATTCAATGTTTTTTTAGAG+TGG | - | chr7_4:33212780-33212799 | None:intergenic | 20.0% |
| !! | TTAGCATATTCATATATTTC+AGG | + | chr7_4:33213724-33213743 | Msa1150190:intron | 20.0% |
| !! | TAGCATATTCATATATTTCA+GGG | + | chr7_4:33213725-33213744 | Msa1150190:intron | 20.0% |
| !! | TTTGTATTGAAAAATGAAGA+AGG | - | chr7_4:33213818-33213837 | None:intergenic | 20.0% |
| !!! | TCTTCATTTTTCAATACAAA+TGG | + | chr7_4:33213818-33213837 | Msa1150190:intron | 20.0% |
| !!! | TATACAATAATTGATGATGT+GGG | - | chr7_4:33213912-33213931 | None:intergenic | 20.0% |
| !!! | ATATACAATAATTGATGATG+TGG | - | chr7_4:33213913-33213932 | None:intergenic | 20.0% |
| !!! | TTTAGGTTACAATTTTCAAA+AGG | + | chr7_4:33214075-33214094 | Msa1150190:intron | 20.0% |
| !!! | CGTAATAATATCCATTTTAA+CGG | + | chr7_4:33214201-33214220 | Msa1150190:intron | 20.0% |
| !! | CAATACATAATTTATGCAAT+GGG | - | chr7_4:33214348-33214367 | None:intergenic | 20.0% |
| !! | ACAATACATAATTTATGCAA+TGG | - | chr7_4:33214349-33214368 | None:intergenic | 20.0% |
| !!! | ATCTATATCGATTAATTAGT+GGG | - | chr7_4:33214561-33214580 | None:intergenic | 20.0% |
| !! | TAGATTTCATATTTATCGAA+CGG | + | chr7_4:33215195-33215214 | Msa1150190:intron | 20.0% |
| !! | TTTAATATGACCCAAAAAAA+TGG | + | chr7_4:33215431-33215450 | Msa1150190:intron | 20.0% |
| !!! | TATCTTTATGTTTTTTGGTT+TGG | - | chr7_4:33215985-33216004 | None:intergenic | 20.0% |
| !! | ACAAAATTTAAACATTTGAG+AGG | + | chr7_4:33216022-33216041 | Msa1150190:intron | 20.0% |
| !! | TTTCTTATGATTAATATAGG+TGG | - | chr7_4:33216057-33216076 | None:intergenic | 20.0% |
| !! | ATGGTTAAGTTTAAATTTCA+TGG | - | chr7_4:33216082-33216101 | None:intergenic | 20.0% |
| !! | TTAAACTAATCAAATAGTCA+TGG | - | chr7_4:33216101-33216120 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTGTTCTGTTGT+TGG | - | chr7_4:33216349-33216368 | None:intergenic | 20.0% |
| !! | AAATTAATTTAATTCGGAGA+GGG | - | chr7_4:33216439-33216458 | None:intergenic | 20.0% |
| !! | AAAATTAATTTAATTCGGAG+AGG | - | chr7_4:33216440-33216459 | None:intergenic | 20.0% |
| !!! | CTCCGAATTAAATTAATTTT+AGG | + | chr7_4:33216440-33216459 | Msa1150190:intron | 20.0% |
| !! | CGCCTAAAATTAATTTAATT+CGG | - | chr7_4:33216445-33216464 | None:intergenic | 20.0% |
| !!! | CGAATTAAATTAATTTTAGG+CGG | + | chr7_4:33216443-33216462 | Msa1150190:intron | 20.0% |
| !!! | GAATTAAATTAATTTTAGGC+GGG | + | chr7_4:33216444-33216463 | Msa1150190:intron | 20.0% |
| !!! | AATTAAATTAATTTTAGGCG+GGG | + | chr7_4:33216445-33216464 | Msa1150190:intron | 20.0% |
| !! | AATTAATTTAATTCGTAGAG+GGG | - | chr7_4:33216483-33216502 | None:intergenic | 20.0% |
| !!! | TTTCAGTTTCAGAATTTTAT+GGG | - | chr7_4:33216628-33216647 | None:intergenic | 20.0% |
| !!! | TTTTCAGTTTCAGAATTTTA+TGG | - | chr7_4:33216629-33216648 | None:intergenic | 20.0% |
| !!! | AAATTAACATCTTTTGGAAA+GGG | + | chr7_4:33216754-33216773 | Msa1150190:intron | 20.0% |
| !!! | TTTTCATGTAGTACATATAA+AGG | + | chr7_4:33216918-33216937 | Msa1150190:intron | 20.0% |
| !! | TTTCATGTAGTACATATAAA+GGG | + | chr7_4:33216919-33216938 | Msa1150190:intron | 20.0% |
| !!! | AACCTATATCTTTCATTTTA+GGG | - | chr7_4:33217204-33217223 | None:intergenic | 20.0% |
| !!! | TTTTCGATATCAATTTTAGT+GGG | - | chr7_4:33217474-33217493 | None:intergenic | 20.0% |
| !!! | AAAACTATTTTTTGCAAATG+TGG | + | chr7_4:33217935-33217954 | Msa1150190:intron | 20.0% |
| !!! | GAGATTTTATTTTCAAACTA+TGG | + | chr7_4:33217994-33218013 | Msa1150190:intron | 20.0% |
| !! | TTGAAGGAATATAAAGATAA+TGG | - | chr7_4:33218454-33218473 | None:intergenic | 20.0% |
| ! | CTACTTTACAAACAAAATCA+AGG | + | chr7_4:33212163-33212182 | Msa1150190:five_prime_UTR | 25.0% |
| !! | TTTTTCTTTATGACTACACT+TGG | - | chr7_4:33212218-33212237 | None:intergenic | 25.0% |
| ! | TGTCATTAAGAGTTAAGATA+AGG | - | chr7_4:33212342-33212361 | None:intergenic | 25.0% |
| !!! | GCATAATTTTGTTGTCAAAT+TGG | + | chr7_4:33212513-33212532 | Msa1150190:intron | 25.0% |
| ! | CAAAGACACAATAAACAAAA+CGG | - | chr7_4:33212543-33212562 | None:intergenic | 25.0% |
| ! | ATCAATTGAAATACTCATGT+CGG | - | chr7_4:33212665-33212684 | None:intergenic | 25.0% |
| ! | TTAATAAATGTTTGGAAGAG+TGG | + | chr7_4:33212980-33212999 | Msa1150190:CDS | 25.0% |
| !! | ATCTATTATTTTCTTCGAGA+GGG | - | chr7_4:33213219-33213238 | None:intergenic | 25.0% |
| !! | TATCTATTATTTTCTTCGAG+AGG | - | chr7_4:33213220-33213239 | None:intergenic | 25.0% |
| ! | GAAGATATAAACACTACAAT+TGG | + | chr7_4:33213248-33213267 | Msa1150190:CDS | 25.0% |
| !!! | TTCTAAAACAATCTGGATAT+GGG | + | chr7_4:33213318-33213337 | Msa1150190:CDS | 25.0% |
| !!! | GACGGATTAATAATAGTTTA+AGG | + | chr7_4:33213696-33213715 | Msa1150190:intron | 25.0% |
| ! | TGGTTGAATTGAAATACTTT+AGG | + | chr7_4:33214058-33214077 | Msa1150190:intron | 25.0% |
| ! | TTCTTCTTTGTAATTCATTG+TGG | + | chr7_4:33214107-33214126 | Msa1150190:intron | 25.0% |
| !!! | TTATTTAGTTTGACTCACAA+AGG | + | chr7_4:33214158-33214177 | Msa1150190:intron | 25.0% |
| !!! | TAATATCCATTTTAACGGAA+AGG | + | chr7_4:33214206-33214225 | Msa1150190:intron | 25.0% |
| !! | CATCTATATCGATTAATTAG+TGG | - | chr7_4:33214562-33214581 | None:intergenic | 25.0% |
| ! | CTAATTAATCGATATAGATG+CGG | + | chr7_4:33214562-33214581 | Msa1150190:intron | 25.0% |
| !!! | ACAATATTTAATAGCGGATA+TGG | - | chr7_4:33214616-33214635 | None:intergenic | 25.0% |
| !!! | TAGGAAGTTGAAAAGTATTA+AGG | - | chr7_4:33214654-33214673 | None:intergenic | 25.0% |
| !!! | ATTACACTCCTTTTTTTTTG+TGG | + | chr7_4:33214731-33214750 | Msa1150190:intron | 25.0% |
| ! | TCATACTCTTAAGATAAGAT+AGG | - | chr7_4:33215325-33215344 | None:intergenic | 25.0% |
| !!! | CACCTTTAAACCATTTTTTT+GGG | - | chr7_4:33215444-33215463 | None:intergenic | 25.0% |
| !! | GTGGTTTTCTTTACTATTTT+TGG | + | chr7_4:33215461-33215480 | Msa1150190:intron | 25.0% |
| !!! | GCTTAGATAGTTTAATTTTG+TGG | - | chr7_4:33215606-33215625 | None:intergenic | 25.0% |
| ! | TTAATTAATCAATTCAGGAG+CGG | + | chr7_4:33215630-33215649 | Msa1150190:intron | 25.0% |
| ! | TTGAGAATATACAATAGTCA+AGG | + | chr7_4:33215926-33215945 | Msa1150190:intron | 25.0% |
| ! | ATAAGGTTTACTTATCACAA+TGG | - | chr7_4:33216124-33216143 | None:intergenic | 25.0% |
| ! | AATTAATTTAATTCGGAGAG+GGG | - | chr7_4:33216438-33216457 | None:intergenic | 25.0% |
| !!! | TTTCAAGTTACTCTATACAA+AGG | + | chr7_4:33216569-33216588 | Msa1150190:intron | 25.0% |
| !! | TTCAAGTTACTCTATACAAA+GGG | + | chr7_4:33216570-33216589 | Msa1150190:intron | 25.0% |
| !! | TGGAAGAAATTAACATCTTT+TGG | + | chr7_4:33216748-33216767 | Msa1150190:intron | 25.0% |
| !!! | GAAATTAACATCTTTTGGAA+AGG | + | chr7_4:33216753-33216772 | Msa1150190:intron | 25.0% |
| ! | ACTCTATAGAATCTTTGATA+AGG | + | chr7_4:33216890-33216909 | Msa1150190:intron | 25.0% |
| ! | AACCCTAAAATGAAAGATAT+AGG | + | chr7_4:33217199-33217218 | Msa1150190:intron | 25.0% |
| !! | GAACCTATATCTTTCATTTT+AGG | - | chr7_4:33217205-33217224 | None:intergenic | 25.0% |
| ! | GAAAGATATAGGTTCAAATT+CGG | + | chr7_4:33217210-33217229 | Msa1150190:intron | 25.0% |
| ! | AAAGATATAGGTTCAAATTC+GGG | + | chr7_4:33217211-33217230 | Msa1150190:intron | 25.0% |
| !! | CTTTTCGATATCAATTTTAG+TGG | - | chr7_4:33217475-33217494 | None:intergenic | 25.0% |
| ! | TAACAAATATTATGGGTAGT+AGG | - | chr7_4:33217690-33217709 | None:intergenic | 25.0% |
| ! | TTGCACATAACATTCATTAA+AGG | + | chr7_4:33217850-33217869 | Msa1150190:intron | 25.0% |
| ! | TGCACATAACATTCATTAAA+GGG | + | chr7_4:33217851-33217870 | Msa1150190:intron | 25.0% |
| !!! | TCAAAAAGAGTATCACTTTT+AGG | - | chr7_4:33217913-33217932 | None:intergenic | 25.0% |
| ! | ATTGTAGGAATAAAATCTCA+AGG | + | chr7_4:33217963-33217982 | Msa1150190:intron | 25.0% |
| ! | TCATAAGACAATAGTCAATT+GGG | - | chr7_4:33218052-33218071 | None:intergenic | 25.0% |
| ! | TTATAACTAACATGACTGTT+GGG | - | chr7_4:33218397-33218416 | None:intergenic | 25.0% |
| ! | TTTATAACTAACATGACTGT+TGG | - | chr7_4:33218398-33218417 | None:intergenic | 25.0% |
| ! | TAAATCTTGATTGACATTGT+TGG | + | chr7_4:33218414-33218433 | Msa1150190:three_prime_UTR | 25.0% |
| AAAAAAAAAAGGACGAACGA+TGG | - | chr7_4:33212448-33212467 | None:intergenic | 30.0% | |
| TCAATTGAAATACTCATGTC+GGG | - | chr7_4:33212664-33212683 | None:intergenic | 30.0% | |
| ! | ACTGTTTCTTCTATCTTTCA+AGG | + | chr7_4:33213078-33213097 | Msa1150190:CDS | 30.0% |
| GAAAGCTCAATATTCTAGTA+CGG | + | chr7_4:33213100-33213119 | Msa1150190:intron | 30.0% | |
| ! | TCTATTATTTTCTTCGAGAG+GGG | - | chr7_4:33213218-33213237 | None:intergenic | 30.0% |
| ! | ATTGGTACAAATTTTGTGTC+TGG | + | chr7_4:33213266-33213285 | Msa1150190:CDS | 30.0% |
| !!! | ATCCAGATTGTTTTAGAAGA+GGG | - | chr7_4:33213316-33213335 | None:intergenic | 30.0% |
| !!! | TATCCAGATTGTTTTAGAAG+AGG | - | chr7_4:33213317-33213336 | None:intergenic | 30.0% |
| !! | CTTCTAAAACAATCTGGATA+TGG | + | chr7_4:33213317-33213336 | Msa1150190:CDS | 30.0% |
| ATTCCCATATTATCCGTTTA+TGG | + | chr7_4:33213380-33213399 | Msa1150190:CDS | 30.0% | |
| !!! | CTTGCTTTTTAGAGATTTCA+GGG | - | chr7_4:33213642-33213661 | None:intergenic | 30.0% |
| !!! | TCTTGCTTTTTAGAGATTTC+AGG | - | chr7_4:33213643-33213662 | None:intergenic | 30.0% |
| ATTAGATAAAGAAGGGAGTT+CGG | + | chr7_4:33213791-33213810 | Msa1150190:intron | 30.0% | |
| CTTAAAAGAACACAACATTG+TGG | - | chr7_4:33213975-33213994 | None:intergenic | 30.0% | |
| ! | CAATGTTGTGTTCTTTTAAG+TGG | + | chr7_4:33213975-33213994 | Msa1150190:intron | 30.0% |
| ! | AGGTTACAATTTTCAAAAGG+TGG | + | chr7_4:33214078-33214097 | Msa1150190:intron | 30.0% |
| TTTGTAATTCATTGTGGAGA+AGG | + | chr7_4:33214113-33214132 | Msa1150190:intron | 30.0% | |
| CAATTAAATGTGAAGAAGTG+TGG | + | chr7_4:33214308-33214327 | Msa1150190:intron | 30.0% | |
| TATCAAATGAGCTAAACTCA+CGG | + | chr7_4:33214371-33214390 | Msa1150190:intron | 30.0% | |
| !! | TATTTGGCAATATTGGTTCA+TGG | + | chr7_4:33214413-33214432 | Msa1150190:intron | 30.0% |
| TGCATAATATATGCAATGTC+CGG | - | chr7_4:33214774-33214793 | None:intergenic | 30.0% | |
| !!! | AGCAAGAAACTTTGTTTTTG+TGG | + | chr7_4:33214875-33214894 | Msa1150190:intron | 30.0% |
| !!! | ATAGATTTTGAGATATCCAC+GGG | - | chr7_4:33215131-33215150 | None:intergenic | 30.0% |
| !!! | CATAGATTTTGAGATATCCA+CGG | - | chr7_4:33215132-33215151 | None:intergenic | 30.0% |
| TTCATATTTATCGAACGGAA+CGG | + | chr7_4:33215200-33215219 | Msa1150190:intron | 30.0% | |
| GACCCAAAAAAATGGTTTAA+AGG | + | chr7_4:33215439-33215458 | Msa1150190:intron | 30.0% | |
| !!! | CCACCTTTAAACCATTTTTT+TGG | - | chr7_4:33215445-33215464 | None:intergenic | 30.0% |
| CCAAAAAAATGGTTTAAAGG+TGG | + | chr7_4:33215442-33215461 | Msa1150190:intron | 30.0% | |
| !!! | CTTTATGTTTTTTGGTTTGG+TGG | - | chr7_4:33215982-33216001 | None:intergenic | 30.0% |
| ! | TGGTTGCGATTCTTTTAAAT+TGG | + | chr7_4:33216172-33216191 | Msa1150190:intron | 30.0% |
| ! | AAGATGGTCTTGATTTGATT+TGG | - | chr7_4:33216213-33216232 | None:intergenic | 30.0% |
| CATGGAAAGAAAGTAAAAGA+TGG | - | chr7_4:33216229-33216248 | None:intergenic | 30.0% | |
| !! | TTTATAAGGTTGGTATCTCA+TGG | - | chr7_4:33216247-33216266 | None:intergenic | 30.0% |
| TTACTTCCTTCCAAACAAAA+AGG | + | chr7_4:33216395-33216414 | Msa1150190:intron | 30.0% | |
| TGAAGATTTCATTGTTTGTG+TGG | - | chr7_4:33216535-33216554 | None:intergenic | 30.0% | |
| ACAAACCTTAATTGTGAAGT+TGG | - | chr7_4:33216673-33216692 | None:intergenic | 30.0% | |
| AGGGAATGACTTTGATTATA+CGG | + | chr7_4:33216715-33216734 | Msa1150190:intron | 30.0% | |
| GATTATACGGATGAAAAACA+TGG | + | chr7_4:33216728-33216747 | Msa1150190:intron | 30.0% | |
| TGCAGAGTGAAAAATAACTT+TGG | + | chr7_4:33217815-33217834 | Msa1150190:intron | 30.0% | |
| ! | ATAGTCAATTGGGATTTTCA+AGG | - | chr7_4:33218042-33218061 | None:intergenic | 30.0% |
| CTCATAAGACAATAGTCAAT+TGG | - | chr7_4:33218053-33218072 | None:intergenic | 30.0% | |
| ! | TCAAACAGAATGATGATGAA+GGG | + | chr7_4:33218143-33218162 | Msa1150190:intron | 30.0% |
| ACTAGTGATGATATCTCTTT+AGG | - | chr7_4:33218223-33218242 | None:intergenic | 30.0% | |
| !! | TAGATAGCTATGTGTTGATT+TGG | + | chr7_4:33218316-33218335 | Msa1150190:exon | 30.0% |
| ! | GAATATAAAGATAATGGCCA+TGG | - | chr7_4:33218448-33218467 | None:intergenic | 30.0% |
| AACAAAGTTAAGCAGCTTCA+AGG | + | chr7_4:33212248-33212267 | Msa1150190:CDS | 35.0% | |
| ATGAATTAGGTACGCAATTG+TGG | + | chr7_4:33212900-33212919 | Msa1150190:intron | 35.0% | |
| AGTAAGGGGTTTAATGTAAC+AGG | + | chr7_4:33213006-33213025 | Msa1150190:CDS | 35.0% | |
| TGAAGAACGCAAGAAACTAA+TGG | + | chr7_4:33213053-33213072 | Msa1150190:CDS | 35.0% | |
| !! | TACCCTCTTCTAAAACAATC+TGG | + | chr7_4:33213311-33213330 | Msa1150190:CDS | 35.0% |
| ! | AATAGCTTGTAAACCAGCAA+TGG | - | chr7_4:33213363-33213382 | None:intergenic | 35.0% |
| GCTCCATAAACGGATAATAT+GGG | - | chr7_4:33213386-33213405 | None:intergenic | 35.0% | |
| ! | TCAATGAAACGTACCTTTTG+TGG | - | chr7_4:33213408-33213427 | None:intergenic | 35.0% |
| ! | TTTTGGCAGAACAAAATGTC+AGG | - | chr7_4:33213525-33213544 | None:intergenic | 35.0% |
| CGTTTGTAATTACAGTGATG+TGG | - | chr7_4:33213589-33213608 | None:intergenic | 35.0% | |
| ATTTCAGGGACTAATTACAG+GGG | - | chr7_4:33213628-33213647 | None:intergenic | 35.0% | |
| GATTTCAGGGACTAATTACA+GGG | - | chr7_4:33213629-33213648 | None:intergenic | 35.0% | |
| AGATTTCAGGGACTAATTAC+AGG | - | chr7_4:33213630-33213649 | None:intergenic | 35.0% | |
| TAGTTTGACTCACAAAGGTT+TGG | + | chr7_4:33214163-33214182 | Msa1150190:intron | 35.0% | |
| !! | AAAGGTTTGGTGTACTTAGT+TGG | + | chr7_4:33214176-33214195 | Msa1150190:intron | 35.0% |
| AAAGGTGACGAACATATAAG+AGG | + | chr7_4:33214224-33214243 | Msa1150190:intron | 35.0% | |
| !! | ATTTTTGTCAACTAGCCTAG+TGG | + | chr7_4:33214273-33214292 | Msa1150190:intron | 35.0% |
| ! | ATGTGAAGAAGTGTGGTATT+TGG | + | chr7_4:33214315-33214334 | Msa1150190:intron | 35.0% |
| ! | TGTGAAGAAGTGTGGTATTT+GGG | + | chr7_4:33214316-33214335 | Msa1150190:intron | 35.0% |
| ! | GTGAGTTTAGCTCATTTGAT+AGG | - | chr7_4:33214372-33214391 | None:intergenic | 35.0% |
| ATCAAATGAGCTAAACTCAC+GGG | + | chr7_4:33214372-33214391 | Msa1150190:intron | 35.0% | |
| !! | TATTGGTTCATGGTAAGAGT+AGG | + | chr7_4:33214423-33214442 | Msa1150190:intron | 35.0% |
| ! | ATTGGTTCATGGTAAGAGTA+GGG | + | chr7_4:33214424-33214443 | Msa1150190:intron | 35.0% |
| ! | ATTTTATCCACGGATATCCA+CGG | - | chr7_4:33214471-33214490 | None:intergenic | 35.0% |
| CGATATAGATGCGGATTTAA+TGG | + | chr7_4:33214571-33214590 | Msa1150190:intron | 35.0% | |
| !!! | CAACACTAGGTTTTTTGCTT+AGG | - | chr7_4:33214673-33214692 | None:intergenic | 35.0% |
| CTAATAACACTCACAACACT+AGG | - | chr7_4:33214686-33214705 | None:intergenic | 35.0% | |
| !!! | ACACTCCTTTTTTTTTGTGG+TGG | + | chr7_4:33214734-33214753 | Msa1150190:intron | 35.0% |
| CATAATATATGCAATGTCCG+GGG | - | chr7_4:33214772-33214791 | None:intergenic | 35.0% | |
| GCATAATATATGCAATGTCC+GGG | - | chr7_4:33214773-33214792 | None:intergenic | 35.0% | |
| CTGTATTACGCTCCTTTAAA+AGG | + | chr7_4:33214827-33214846 | Msa1150190:intron | 35.0% | |
| ! | CCACTTTCACTACCTTTTAA+AGG | - | chr7_4:33214842-33214861 | None:intergenic | 35.0% |
| ! | CCTTTAAAAGGTAGTGAAAG+TGG | + | chr7_4:33214839-33214858 | Msa1150190:intron | 35.0% |
| TAAAAGGTAGTGAAAGTGGT+CGG | + | chr7_4:33214843-33214862 | Msa1150190:intron | 35.0% | |
| CGTGGATATCTCAAAATCTA+TGG | + | chr7_4:33215130-33215149 | Msa1150190:intron | 35.0% | |
| ! | TCTATGGATTATCCGCTAAA+CGG | + | chr7_4:33215146-33215165 | Msa1150190:intron | 35.0% |
| ATATTCTATCCATATCAGCG+CGG | - | chr7_4:33215176-33215195 | None:intergenic | 35.0% | |
| ATCCATTTACATCCCTAAGT+AGG | + | chr7_4:33215255-33215274 | Msa1150190:intron | 35.0% | |
| ATTCACGAAGAACTTAGCAT+TGG | + | chr7_4:33215660-33215679 | Msa1150190:CDS | 35.0% | |
| ! | GAAGAACTTAGCATTGGAAT+GGG | + | chr7_4:33215666-33215685 | Msa1150190:CDS | 35.0% |
| TAATATTCGTGCAAATGCTG+TGG | + | chr7_4:33215696-33215715 | Msa1150190:CDS | 35.0% | |
| ATCACTCTTGCAATCAATCA+GGG | + | chr7_4:33215738-33215757 | Msa1150190:CDS | 35.0% | |
| !! | ATCGCAACCATTTGATTTTC+CGG | - | chr7_4:33216162-33216181 | None:intergenic | 35.0% |
| TGTGGTGCAATTTATAAGGT+TGG | - | chr7_4:33216257-33216276 | None:intergenic | 35.0% | |
| GTCATGTGGTGCAATTTATA+AGG | - | chr7_4:33216261-33216280 | None:intergenic | 35.0% | |
| AATTGCACCACATGACAAAA+AGG | + | chr7_4:33216265-33216284 | Msa1150190:intron | 35.0% | |
| TTCCTTCCAAACAAAAAGGT+GGG | + | chr7_4:33216399-33216418 | Msa1150190:intron | 35.0% | |
| ! | TTTAACCCCACCTTTTTGTT+TGG | - | chr7_4:33216408-33216427 | None:intergenic | 35.0% |
| AGCTTCCAACTTCACAATTA+AGG | + | chr7_4:33216665-33216684 | Msa1150190:intron | 35.0% | |
| ! | AGAGTTTAGAGAGTGTATGA+GGG | + | chr7_4:33216696-33216715 | Msa1150190:intron | 35.0% |
| ATTCGGTTGAATCTTTAGTG+AGG | - | chr7_4:33217240-33217259 | None:intergenic | 35.0% | |
| AAGATTCAACCGAATGATGT+TGG | + | chr7_4:33217245-33217264 | Msa1150190:intron | 35.0% | |
| CCAATGAAACCAACATCATT+CGG | - | chr7_4:33217257-33217276 | None:intergenic | 35.0% | |
| GTGTATGCAACATGTATACT+AGG | - | chr7_4:33217312-33217331 | None:intergenic | 35.0% | |
| AAATCTCAGTATCCAGTCTA+AGG | + | chr7_4:33217377-33217396 | Msa1150190:intron | 35.0% | |
| !! | CGATATCAATTTTAGTGGGT+TGG | - | chr7_4:33217470-33217489 | None:intergenic | 35.0% |
| ATGAAACTTTAGACTTTGCG+AGG | + | chr7_4:33217496-33217515 | Msa1150190:intron | 35.0% | |
| GCAAATGTGGCAAATATTGT+AGG | + | chr7_4:33217948-33217967 | Msa1150190:intron | 35.0% | |
| ! | CTCAAACAGAATGATGATGA+AGG | + | chr7_4:33218142-33218161 | Msa1150190:intron | 35.0% |
| ! | CAAACAGAATGATGATGAAG+GGG | + | chr7_4:33218144-33218163 | Msa1150190:intron | 35.0% |
| ! | GTAGTGTCTAAAACACCTAT+GGG | + | chr7_4:33218184-33218203 | Msa1150190:CDS | 35.0% |
| GGACAAGTTATAGCTATTGA+TGG | + | chr7_4:33218280-33218299 | Msa1150190:CDS | 35.0% | |
| CAAGTTATAGCTATTGATGG+AGG | + | chr7_4:33218283-33218302 | Msa1150190:CDS | 35.0% | |
| TCTTGATTGACATTGTTGGT+TGG | + | chr7_4:33218418-33218437 | Msa1150190:three_prime_UTR | 35.0% | |
| ! | TATAAAGATAATGGCCATGG+AGG | - | chr7_4:33218445-33218464 | None:intergenic | 35.0% |
| AAGGAAATTACCCAATGCCT+CGG | - | chr7_4:33212323-33212342 | None:intergenic | 40.0% | |
| GTGGAAGAGTTAGCAGAATT+TGG | + | chr7_4:33212919-33212938 | Msa1150190:CDS | 40.0% | |
| TTTGGAAGAGTGGAGAAGTA+AGG | + | chr7_4:33212990-33213009 | Msa1150190:CDS | 40.0% | |
| TTGGAAGAGTGGAGAAGTAA+GGG | + | chr7_4:33212991-33213010 | Msa1150190:CDS | 40.0% | |
| ! | GGTATGCAAGTTGACACAAA+TGG | - | chr7_4:33213295-33213314 | None:intergenic | 40.0% |
| GGCTCCATAAACGGATAATA+TGG | - | chr7_4:33213387-33213406 | None:intergenic | 40.0% | |
| ! | ACCTTTTGTGGCTCCATAAA+CGG | - | chr7_4:33213396-33213415 | None:intergenic | 40.0% |
| TGTGTTTAGACACTGCAAAC+AGG | + | chr7_4:33213465-33213484 | Msa1150190:intron | 40.0% | |
| GTGTTTAGACACTGCAAACA+GGG | + | chr7_4:33213466-33213485 | Msa1150190:intron | 40.0% | |
| TGTTTAGACACTGCAAACAG+GGG | + | chr7_4:33213467-33213486 | Msa1150190:intron | 40.0% | |
| TGGCAGTAATTAACTGGAGA+GGG | - | chr7_4:33213569-33213588 | None:intergenic | 40.0% | |
| GTGATGTGGCAGTAATTAAC+TGG | - | chr7_4:33213575-33213594 | None:intergenic | 40.0% | |
| ! | AAGAGAGTGCAGTGAATGTT+GGG | + | chr7_4:33213659-33213678 | Msa1150190:intron | 40.0% |
| TGGGTTCAAGACTTCTTTGA+CGG | + | chr7_4:33213678-33213697 | Msa1150190:intron | 40.0% | |
| TCATTGTGGAGAAGGAAGAA+TGG | + | chr7_4:33214121-33214140 | Msa1150190:intron | 40.0% | |
| TCGTCACCTTTCCGTTAAAA+TGG | - | chr7_4:33214215-33214234 | None:intergenic | 40.0% | |
| ! | TTGTATGAGCTCTAACCACT+AGG | - | chr7_4:33214291-33214310 | None:intergenic | 40.0% |
| ! | GTGAAGAAGTGTGGTATTTG+GGG | + | chr7_4:33214317-33214336 | Msa1150190:intron | 40.0% |
| TCAAATGAGCTAAACTCACG+GGG | + | chr7_4:33214373-33214392 | Msa1150190:intron | 40.0% | |
| CAAAAAAAAAATCGCACCCG+TGG | + | chr7_4:33214451-33214470 | Msa1150190:intron | 40.0% | |
| ! | TTTTATCCACGGATATCCAC+GGG | - | chr7_4:33214470-33214489 | None:intergenic | 40.0% |
| GGATTTAATGGTATCTGCAC+CGG | + | chr7_4:33214583-33214602 | Msa1150190:intron | 40.0% | |
| CTCGACCACCACAAAAAAAA+AGG | - | chr7_4:33214742-33214761 | None:intergenic | 40.0% | |
| !!! | CTTTTTTTTTGTGGTGGTCG+AGG | + | chr7_4:33214740-33214759 | Msa1150190:intron | 40.0% |
| TATCACACTATCTGCATCCA+TGG | + | chr7_4:33215230-33215249 | Msa1150190:intron | 40.0% | |
| GGGATGTAAATGGATATCCA+TGG | - | chr7_4:33215250-33215269 | None:intergenic | 40.0% | |
| CTCCTACTTAGGGATGTAAA+TGG | - | chr7_4:33215260-33215279 | None:intergenic | 40.0% | |
| CATTTCTACGCTCCTACTTA+GGG | - | chr7_4:33215270-33215289 | None:intergenic | 40.0% | |
| TCATTTCTACGCTCCTACTT+AGG | - | chr7_4:33215271-33215290 | None:intergenic | 40.0% | |
| !! | CCACTGCTCTGAAAAAACAA+AGG | - | chr7_4:33215296-33215315 | None:intergenic | 40.0% |
| !!! | CCTTTGTTTTTTCAGAGCAG+TGG | + | chr7_4:33215293-33215312 | Msa1150190:intron | 40.0% |
| ! | CGAAGAACTTAGCATTGGAA+TGG | + | chr7_4:33215665-33215684 | Msa1150190:CDS | 40.0% |
| CATCACTCTTGCAATCAATC+AGG | + | chr7_4:33215737-33215756 | Msa1150190:CDS | 40.0% | |
| ! | GTTTGGTGGCTATGTTTGTT+TGG | - | chr7_4:33215968-33215987 | None:intergenic | 40.0% |
| ! | AACCACACCTTTTTGTCATG+TGG | - | chr7_4:33216275-33216294 | None:intergenic | 40.0% |
| GTTCTGTTGTTGGCAGATTA+TGG | - | chr7_4:33216339-33216358 | None:intergenic | 40.0% | |
| CTTCCTTCCAAACAAAAAGG+TGG | + | chr7_4:33216398-33216417 | Msa1150190:intron | 40.0% | |
| TCCTTCCAAACAAAAAGGTG+GGG | + | chr7_4:33216400-33216419 | Msa1150190:intron | 40.0% | |
| ! | GAGAGTTTAGAGAGTGTATG+AGG | + | chr7_4:33216695-33216714 | Msa1150190:intron | 40.0% |
| GTACATATAAAGGGATTGCG+TGG | + | chr7_4:33216928-33216947 | Msa1150190:intron | 40.0% | |
| !! | CCGAATGATGTTGGTTTCAT+TGG | + | chr7_4:33217254-33217273 | Msa1150190:intron | 40.0% |
| ! | TTGGTTTCATTGGCTGTGTT+AGG | + | chr7_4:33217264-33217283 | Msa1150190:intron | 40.0% |
| GTGTTAGGTCTTACATGTTG+CGG | + | chr7_4:33217279-33217298 | Msa1150190:intron | 40.0% | |
| ! | CAAACTATGGACTGTGTGTT+TGG | + | chr7_4:33218007-33218026 | Msa1150190:intron | 40.0% |
| ! | GGTAGTGTCTAAAACACCTA+TGG | + | chr7_4:33218183-33218202 | Msa1150190:CDS | 40.0% |
| TAAAACACCTATGGGTCGTA+TGG | + | chr7_4:33218192-33218211 | Msa1150190:CDS | 40.0% | |
| AAAACACCTATGGGTCGTAT+GGG | + | chr7_4:33218193-33218212 | Msa1150190:CDS | 40.0% | |
| GCAGCTTCAAGGATAAGAGA+TGG | + | chr7_4:33212259-33212278 | Msa1150190:CDS | 45.0% | |
| GATAAGAGATGGTCACTGCA+TGG | + | chr7_4:33212270-33212289 | Msa1150190:CDS | 45.0% | |
| GGTATGACTGCGTTAGTAAC+AGG | + | chr7_4:33212291-33212310 | Msa1150190:CDS | 45.0% | |
| ATGACTGCGTTAGTAACAGG+TGG | + | chr7_4:33212294-33212313 | Msa1150190:CDS | 45.0% | |
| AGGAAATTACCCAATGCCTC+GGG | - | chr7_4:33212322-33212341 | None:intergenic | 45.0% | |
| TGGAAGAGTGGAGAAGTAAG+GGG | + | chr7_4:33212992-33213011 | Msa1150190:CDS | 45.0% | |
| GTGTTTACTTCGTCCATTGC+TGG | + | chr7_4:33213347-33213366 | Msa1150190:CDS | 45.0% | |
| TCCGTTTATGGAGCCACAAA+AGG | + | chr7_4:33213392-33213411 | Msa1150190:CDS | 45.0% | |
| GTGGCAGTAATTAACTGGAG+AGG | - | chr7_4:33213570-33213589 | None:intergenic | 45.0% | |
| ! | CAAGAGAGTGCAGTGAATGT+TGG | + | chr7_4:33213658-33213677 | Msa1150190:intron | 45.0% |
| GTAGTGAGTCCTACACTTAG+TGG | + | chr7_4:33213884-33213903 | Msa1150190:intron | 45.0% | |
| ATGTGGGATCCACTAAGTGT+AGG | - | chr7_4:33213896-33213915 | None:intergenic | 45.0% | |
| GGTGACGAACATATAAGAGG+TGG | + | chr7_4:33214227-33214246 | Msa1150190:intron | 45.0% | |
| GTTCATGGTAAGAGTAGGGA+TGG | + | chr7_4:33214428-33214447 | Msa1150190:intron | 45.0% | |
| ! | TCCATGGGGGATTTTATCCA+CGG | - | chr7_4:33214481-33214500 | None:intergenic | 45.0% |
| GATAAAATCCCCCATGGACA+CGG | + | chr7_4:33214483-33214502 | Msa1150190:intron | 45.0% | |
| TTTAATGGTATCTGCACCGG+TGG | + | chr7_4:33214586-33214605 | Msa1150190:intron | 45.0% | |
| ! | TAGCGGATATGGATATCCAC+CGG | - | chr7_4:33214605-33214624 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+CGG | - | chr7_4:33214801-33214820 | None:intergenic | 45.0% |
| TCTTGTGAGCTTAGCTCAGT+TGG | - | chr7_4:33214806-33214825 | None:intergenic | 45.0% | |
| ACGGGTTTATGCAGATACCA+TGG | - | chr7_4:33215113-33215132 | None:intergenic | 45.0% | |
| ATGGTATCTGCATAAACCCG+TGG | + | chr7_4:33215112-33215131 | Msa1150190:intron | 45.0% | |
| TGCAAGAGTGATGTCTTGAC+AGG | - | chr7_4:33215730-33215749 | None:intergenic | 45.0% | |
| CACCACATGACAAAAAGGTG+TGG | + | chr7_4:33216270-33216289 | Msa1150190:intron | 45.0% | |
| TCCTAACCAAGATGAACACC+TGG | + | chr7_4:33216313-33216332 | Msa1150190:intron | 45.0% | |
| TTATGGCCAGGTGTTCATCT+TGG | - | chr7_4:33216322-33216341 | None:intergenic | 45.0% | |
| !! | ACCCCACCTTTTTGTTTGGA+AGG | - | chr7_4:33216404-33216423 | None:intergenic | 45.0% |
| !! | CTTTTGGAAAGGGAGAGTTG+TGG | + | chr7_4:33216764-33216783 | Msa1150190:intron | 45.0% |
| ! | AGTTGTGGTGACGACTTTAG+AGG | + | chr7_4:33216779-33216798 | Msa1150190:intron | 45.0% |
| ! | GTTGTGGTGACGACTTTAGA+GGG | + | chr7_4:33216780-33216799 | Msa1150190:intron | 45.0% |
| !! | GGATTAGTCGATCCTTAGAC+TGG | - | chr7_4:33217392-33217411 | None:intergenic | 45.0% |
| TCTAAGGATCGACTAATCCG+AGG | + | chr7_4:33217393-33217412 | Msa1150190:intron | 45.0% | |
| CTAAGGATCGACTAATCCGA+GGG | + | chr7_4:33217394-33217413 | Msa1150190:intron | 45.0% | |
| TAAGGATCGACTAATCCGAG+GGG | + | chr7_4:33217395-33217414 | Msa1150190:intron | 45.0% | |
| ! | ACTATGGACTGTGTGTTTGG+AGG | + | chr7_4:33218010-33218029 | Msa1150190:intron | 45.0% |
| AAGGGGTTGAAGCTGTAGAT+GGG | + | chr7_4:33218161-33218180 | Msa1150190:CDS | 45.0% | |
| TGCAGCTGGAAGACAAAGAA+AGG | - | chr7_4:33218248-33218267 | None:intergenic | 45.0% | |
| !! | ATTATTTACATAAAAAAAAA+AGG | - | chr7_4:33212459-33212478 | None:intergenic | 5.0% |
| !! | TAGAAAAATAAAAAATAATA+AGG | - | chr7_4:33212878-33212897 | None:intergenic | 5.0% |
| !!! | ATTTTTAAGTAATTAAATTT+TGG | - | chr7_4:33213542-33213561 | None:intergenic | 5.0% |
| !! | AAATTTAATTACTTAAAAAT+TGG | + | chr7_4:33213542-33213561 | Msa1150190:intron | 5.0% |
| !! | AATAATGTTAAATATTTATT+TGG | + | chr7_4:33214397-33214416 | Msa1150190:intron | 5.0% |
| TTAGTAACAGGTGGAACCCG+AGG | + | chr7_4:33212303-33212322 | Msa1150190:CDS | 50.0% | |
| TCCGTGGATAAAATCCCCCA+TGG | + | chr7_4:33214477-33214496 | Msa1150190:intron | 50.0% | |
| TATCTGATCCGTGTCCATGG+GGG | - | chr7_4:33214494-33214513 | None:intergenic | 50.0% | |
| GTATCTGATCCGTGTCCATG+GGG | - | chr7_4:33214495-33214514 | None:intergenic | 50.0% | |
| GGTATCTGATCCGTGTCCAT+GGG | - | chr7_4:33214496-33214515 | None:intergenic | 50.0% | |
| AGGTATCTGATCCGTGTCCA+TGG | - | chr7_4:33214497-33214516 | None:intergenic | 50.0% | |
| ! | AACGGATATCCGCGCTGATA+TGG | + | chr7_4:33215164-33215183 | Msa1150190:intron | 50.0% |
| AGTGATGTCTTGACAGGTCC+AGG | - | chr7_4:33215724-33215743 | None:intergenic | 50.0% | |
| GCCAGGTGTTCATCTTGGTT+AGG | - | chr7_4:33216317-33216336 | None:intergenic | 50.0% | |
| GTTGTTGGCAGATTATGGCC+AGG | - | chr7_4:33216334-33216353 | None:intergenic | 50.0% | |
| CCAATTACACCGTCCACTTG+CGG | + | chr7_4:33217419-33217438 | Msa1150190:intron | 50.0% | |
| CAATTACACCGTCCACTTGC+GGG | + | chr7_4:33217420-33217439 | Msa1150190:intron | 50.0% | |
| AAAATAGAGCCTCCCGCAAG+TGG | - | chr7_4:33217435-33217454 | None:intergenic | 50.0% | |
| GAAGGGGTTGAAGCTGTAGA+TGG | + | chr7_4:33218160-33218179 | Msa1150190:CDS | 50.0% | |
| AGGGGTTGAAGCTGTAGATG+GGG | + | chr7_4:33218162-33218181 | Msa1150190:CDS | 50.0% | |
| CCAGTGATGTATGATGCAGC+TGG | - | chr7_4:33218262-33218281 | None:intergenic | 50.0% | |
| CCAGCTGCATCATACATCAC+TGG | + | chr7_4:33218259-33218278 | Msa1150190:CDS | 50.0% | |
| ! | CATTGTTGGTTGGACCTCCA+TGG | + | chr7_4:33218428-33218447 | Msa1150190:three_prime_UTR | 50.0% |
| CAGCGCGGATATCCGTTTAG+CGG | - | chr7_4:33215161-33215180 | None:intergenic | 55.0% | |
| GACGGTGTAATTGGACCCCT+CGG | - | chr7_4:33217413-33217432 | None:intergenic | 55.0% | |
| CCGCAAGTGGACGGTGTAAT+TGG | - | chr7_4:33217422-33217441 | None:intergenic | 55.0% | |
| ACAGGTGGAACCCGAGGCAT+TGG | + | chr7_4:33212309-33212328 | Msa1150190:CDS | 60.0% | |
| ! | CAGGTGGAACCCGAGGCATT+GGG | + | chr7_4:33212310-33212329 | Msa1150190:CDS | 60.0% |
| ATCGCACCCGTGGATATCCG+TGG | + | chr7_4:33214461-33214480 | Msa1150190:intron | 60.0% | |
| GGTGGTCGAGGTTTGAACCC+CGG | + | chr7_4:33214752-33214771 | Msa1150190:intron | 60.0% | |
| CGTGCAAATGCTGTGGCACC+TGG | + | chr7_4:33215703-33215722 | Msa1150190:CDS | 60.0% | |
| TTACACCGTCCACTTGCGGG+AGG | + | chr7_4:33217423-33217442 | Msa1150190:intron | 60.0% | |
| TAGAGCCTCCCGCAAGTGGA+CGG | - | chr7_4:33217431-33217450 | None:intergenic | 60.0% | |
| GGCTCTCCCATACGACCCAT+AGG | - | chr7_4:33218202-33218221 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 33212156 | 33218509 | 33212156 | ID=Msa1150190;Name=Msa1150190 |
| chr7_4 | mRNA | 33212156 | 33218509 | 33212156 | ID=Msa1150190-mRNA-1;Parent=Msa1150190;Name=Msa1150190-mRNA-1;_AED=0.38;_eAED=0.38;_QI=84|1|1|1|1|1|5|191|265 |
| chr7_4 | exon | 33212156 | 33212331 | 33212156 | ID=Msa1150190-mRNA-1:exon:7916;Parent=Msa1150190-mRNA-1 |
| chr7_4 | exon | 33212909 | 33213116 | 33212909 | ID=Msa1150190-mRNA-1:exon:7917;Parent=Msa1150190-mRNA-1 |
| chr7_4 | exon | 33213197 | 33213413 | 33213197 | ID=Msa1150190-mRNA-1:exon:7918;Parent=Msa1150190-mRNA-1 |
| chr7_4 | exon | 33215647 | 33215759 | 33215647 | ID=Msa1150190-mRNA-1:exon:7919;Parent=Msa1150190-mRNA-1 |
| chr7_4 | exon | 33218151 | 33218509 | 33218151 | ID=Msa1150190-mRNA-1:exon:7920;Parent=Msa1150190-mRNA-1 |
| chr7_4 | five_prime_UTR | 33212156 | 33212239 | 33212156 | ID=Msa1150190-mRNA-1:five_prime_utr;Parent=Msa1150190-mRNA-1 |
| chr7_4 | CDS | 33212240 | 33212331 | 33212240 | ID=Msa1150190-mRNA-1:cds;Parent=Msa1150190-mRNA-1 |
| chr7_4 | CDS | 33212909 | 33213116 | 33212909 | ID=Msa1150190-mRNA-1:cds;Parent=Msa1150190-mRNA-1 |
| chr7_4 | CDS | 33213197 | 33213413 | 33213197 | ID=Msa1150190-mRNA-1:cds;Parent=Msa1150190-mRNA-1 |
| chr7_4 | CDS | 33215647 | 33215759 | 33215647 | ID=Msa1150190-mRNA-1:cds;Parent=Msa1150190-mRNA-1 |
| chr7_4 | CDS | 33218151 | 33218318 | 33218151 | ID=Msa1150190-mRNA-1:cds;Parent=Msa1150190-mRNA-1 |
| chr7_4 | three_prime_UTR | 33218319 | 33218509 | 33218319 | ID=Msa1150190-mRNA-1:three_prime_utr;Parent=Msa1150190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
