Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022610 | KEH22973.1 | 92.830 | 265 | 19 | 0 | 1 | 265 | 1 | 265 | 0.0 | 517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022610 | sp|P50162|TRN1_DATST | 56.877 | 269 | 112 | 2 | 1 | 265 | 1 | 269 | 2.57e-110 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022610 | A0A072U1F3 | 92.830 | 265 | 19 | 0 | 1 | 265 | 1 | 265 | 0.0 | 517 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0718470 | Msa1022610 | 0.809755 | 1.617160e-50 | -8.615850e-47 |
| Msa0738890 | Msa1022610 | 0.808612 | 2.842634e-50 | -8.615850e-47 |
| Msa0819380 | Msa1022610 | 0.847561 | 1.070121e-59 | -8.615850e-47 |
| Msa0366470 | Msa1022610 | 0.821713 | 3.487755e-53 | -8.615850e-47 |
| Msa1022610 | Msa1061470 | 0.914101 | 2.845377e-84 | -8.615850e-47 |
| Msa1022610 | Msa1106770 | 0.978830 | 1.183008e-146 | -8.615850e-47 |
| Msa1022610 | Msa1150190 | 0.847953 | 8.342965e-60 | -8.615850e-47 |
| Msa0243470 | Msa1022610 | 0.802241 | 6.160827e-49 | -8.615850e-47 |
| Msa0281940 | Msa1022610 | 0.807055 | 6.092689e-50 | -8.615850e-47 |
| Msa0859490 | Msa1022610 | 0.818468 | 1.930170e-52 | -8.615850e-47 |
| Msa0859520 | Msa1022610 | 0.823789 | 1.146617e-53 | -8.615850e-47 |
| Msa0859530 | Msa1022610 | 0.810212 | 1.289713e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022610 | MtrunA17_Chr7g0239451 | 88.346 | 266 | 30 | 1 | 1 | 265 | 1 | 266 | 1.68e-180 | 496 |
| Msa1022610 | MtrunA17_Chr7g0239511 | 75.472 | 265 | 64 | 1 | 1 | 264 | 1 | 265 | 8.68e-149 | 416 |
| Msa1022610 | MtrunA17_Chr7g0239501 | 75.094 | 265 | 65 | 1 | 1 | 264 | 1 | 265 | 1.20e-144 | 405 |
| Msa1022610 | MtrunA17_Chr7g0239461 | 75.472 | 265 | 16 | 1 | 1 | 265 | 1 | 216 | 3.90e-141 | 395 |
| Msa1022610 | MtrunA17_Chr7g0239491 | 67.925 | 265 | 84 | 1 | 1 | 265 | 1 | 264 | 1.11e-137 | 388 |
| Msa1022610 | MtrunA17_Chr7g0239481 | 70.833 | 264 | 75 | 2 | 1 | 263 | 1 | 263 | 3.08e-137 | 387 |
| Msa1022610 | MtrunA17_Chr4g0032141 | 58.661 | 254 | 102 | 1 | 11 | 264 | 51 | 301 | 4.10e-111 | 322 |
| Msa1022610 | MtrunA17_Chr3g0112151 | 59.316 | 263 | 102 | 2 | 3 | 264 | 73 | 331 | 8.64e-108 | 315 |
| Msa1022610 | MtrunA17_Chr3g0112261 | 55.814 | 258 | 111 | 1 | 7 | 264 | 10 | 264 | 2.10e-103 | 301 |
| Msa1022610 | MtrunA17_Chr3g0112271 | 55.894 | 263 | 113 | 1 | 2 | 264 | 3 | 262 | 7.23e-102 | 298 |
| Msa1022610 | MtrunA17_Chr3g0112171 | 57.831 | 249 | 102 | 1 | 16 | 264 | 15 | 260 | 8.98e-102 | 297 |
| Msa1022610 | MtrunA17_Chr3g0112141 | 58.000 | 250 | 102 | 1 | 16 | 265 | 17 | 263 | 5.06e-100 | 293 |
| Msa1022610 | MtrunA17_Chr4g0032181 | 54.506 | 233 | 103 | 1 | 32 | 264 | 17 | 246 | 3.11e-91 | 270 |
| Msa1022610 | MtrunA17_Chr4g0075531 | 34.118 | 255 | 158 | 6 | 12 | 265 | 5 | 250 | 6.27e-34 | 123 |
| Msa1022610 | MtrunA17_Chr4g0074511 | 33.203 | 256 | 156 | 6 | 16 | 262 | 40 | 289 | 1.63e-27 | 107 |
| Msa1022610 | MtrunA17_Chr7g0272961 | 31.641 | 256 | 159 | 8 | 16 | 262 | 40 | 288 | 6.51e-27 | 105 |
| Msa1022610 | MtrunA17_Chr7g0259521 | 31.102 | 254 | 164 | 5 | 16 | 263 | 6 | 254 | 1.22e-26 | 104 |
| Msa1022610 | MtrunA17_Chr1g0191751 | 31.250 | 256 | 160 | 7 | 16 | 262 | 101 | 349 | 2.00e-26 | 105 |
| Msa1022610 | MtrunA17_Chr3g0122901 | 30.894 | 246 | 156 | 5 | 22 | 262 | 81 | 317 | 3.47e-26 | 104 |
| Msa1022610 | MtrunA17_Chr0c30g0494101 | 33.463 | 257 | 152 | 8 | 16 | 262 | 40 | 287 | 6.91e-26 | 103 |
| Msa1022610 | MtrunA17_Chr8g0357481 | 29.658 | 263 | 157 | 8 | 16 | 262 | 14 | 264 | 9.18e-25 | 100 |
| Msa1022610 | MtrunA17_Chr7g0259531 | 29.845 | 258 | 162 | 5 | 16 | 263 | 11 | 259 | 2.50e-24 | 98.2 |
| Msa1022610 | MtrunA17_Chr1g0182511 | 31.698 | 265 | 149 | 8 | 16 | 263 | 14 | 263 | 4.51e-24 | 97.8 |
| Msa1022610 | MtrunA17_Chr3g0112321 | 47.059 | 102 | 35 | 3 | 148 | 246 | 2 | 87 | 8.49e-21 | 84.3 |
| Msa1022610 | MtrunA17_Chr7g0249571 | 28.641 | 206 | 141 | 5 | 4 | 204 | 26 | 230 | 2.13e-19 | 85.9 |
| Msa1022610 | MtrunA17_Chr4g0028911 | 26.459 | 257 | 177 | 7 | 16 | 264 | 11 | 263 | 1.17e-18 | 83.2 |
| Msa1022610 | MtrunA17_Chr4g0028921 | 26.848 | 257 | 176 | 7 | 16 | 264 | 11 | 263 | 2.86e-18 | 82.0 |
| Msa1022610 | MtrunA17_Chr4g0026001 | 30.769 | 273 | 165 | 11 | 1 | 264 | 1 | 258 | 4.46e-18 | 81.6 |
| Msa1022610 | MtrunA17_Chr7g0244061 | 29.268 | 287 | 170 | 10 | 3 | 265 | 18 | 295 | 6.92e-18 | 81.6 |
| Msa1022610 | MtrunA17_Chr8g0355281 | 30.435 | 207 | 126 | 6 | 22 | 215 | 75 | 276 | 6.58e-17 | 79.3 |
| Msa1022610 | MtrunA17_Chr6g0459351 | 28.889 | 270 | 176 | 9 | 1 | 263 | 1 | 261 | 1.16e-16 | 77.4 |
| Msa1022610 | MtrunA17_Chr4g0044131 | 26.820 | 261 | 168 | 9 | 16 | 265 | 8 | 256 | 4.07e-16 | 76.3 |
| Msa1022610 | MtrunA17_Chr6g0459281 | 27.778 | 270 | 179 | 9 | 1 | 263 | 1 | 261 | 9.09e-16 | 75.1 |
| Msa1022610 | MtrunA17_Chr4g0025971 | 29.020 | 255 | 165 | 9 | 16 | 264 | 14 | 258 | 9.70e-16 | 75.1 |
| Msa1022610 | MtrunA17_Chr6g0459261 | 28.261 | 276 | 170 | 10 | 1 | 263 | 13 | 273 | 2.74e-15 | 73.9 |
| Msa1022610 | MtrunA17_Chr4g0025981 | 27.668 | 253 | 161 | 8 | 18 | 261 | 43 | 282 | 7.29e-15 | 73.2 |
| Msa1022610 | MtrunA17_Chr7g0266981 | 29.434 | 265 | 172 | 8 | 7 | 264 | 4 | 260 | 2.84e-14 | 70.9 |
| Msa1022610 | MtrunA17_Chr4g0044111 | 29.434 | 265 | 172 | 8 | 7 | 264 | 4 | 260 | 3.16e-14 | 70.9 |
| Msa1022610 | MtrunA17_Chr7g0252031 | 27.740 | 292 | 171 | 12 | 3 | 265 | 8 | 288 | 3.60e-13 | 68.2 |
| Msa1022610 | MtrunA17_Chr7g0268591 | 27.757 | 263 | 167 | 8 | 16 | 265 | 33 | 285 | 3.94e-13 | 67.8 |
| Msa1022610 | MtrunA17_Chr7g0267011 | 28.497 | 193 | 123 | 7 | 16 | 201 | 8 | 192 | 1.32e-12 | 65.1 |
| Msa1022610 | MtrunA17_Chr3g0084871 | 29.885 | 261 | 165 | 7 | 16 | 264 | 16 | 270 | 1.72e-12 | 65.9 |
| Msa1022610 | MtrunA17_Chr6g0485711 | 27.536 | 207 | 129 | 5 | 22 | 208 | 184 | 389 | 2.78e-12 | 66.2 |
| Msa1022610 | MtrunA17_Chr7g0267001 | 24.706 | 255 | 163 | 8 | 16 | 265 | 8 | 238 | 2.80e-12 | 65.1 |
| Msa1022610 | MtrunA17_Chr6g0459271 | 27.037 | 270 | 181 | 9 | 1 | 263 | 1 | 261 | 2.89e-12 | 65.1 |
| Msa1022610 | MtrunA17_Chr6g0459331 | 26.394 | 269 | 157 | 9 | 16 | 263 | 13 | 261 | 1.01e-11 | 63.5 |
| Msa1022610 | MtrunA17_Chr4g0040371 | 26.792 | 265 | 168 | 7 | 16 | 265 | 19 | 272 | 1.93e-11 | 62.8 |
| Msa1022610 | MtrunA17_Chr6g0466681 | 27.586 | 232 | 132 | 7 | 18 | 219 | 66 | 291 | 2.11e-11 | 63.2 |
| Msa1022610 | MtrunA17_Chr7g0266891 | 27.734 | 256 | 170 | 8 | 16 | 264 | 7 | 254 | 3.96e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1022610 | AT5G06060.1 | 59.449 | 254 | 100 | 1 | 11 | 264 | 4 | 254 | 6.94e-110 | 318 |
| Msa1022610 | AT1G07440.1 | 58.039 | 255 | 103 | 1 | 10 | 264 | 6 | 256 | 1.13e-105 | 307 |
| Msa1022610 | AT2G29320.1 | 60.547 | 256 | 96 | 3 | 11 | 264 | 7 | 259 | 3.73e-105 | 306 |
| Msa1022610 | AT2G29260.1 | 56.522 | 253 | 107 | 1 | 12 | 264 | 64 | 313 | 1.31e-104 | 306 |
| Msa1022610 | AT2G29300.1 | 59.608 | 255 | 99 | 2 | 11 | 264 | 2 | 253 | 1.12e-103 | 302 |
| Msa1022610 | AT2G29300.2 | 59.608 | 255 | 99 | 2 | 11 | 264 | 2 | 253 | 5.17e-103 | 301 |
| Msa1022610 | AT2G29340.2 | 59.055 | 254 | 101 | 1 | 11 | 264 | 2 | 252 | 1.56e-102 | 299 |
| Msa1022610 | AT2G29340.1 | 59.055 | 254 | 101 | 1 | 11 | 264 | 2 | 252 | 4.24e-102 | 300 |
| Msa1022610 | AT2G29290.2 | 56.693 | 254 | 107 | 1 | 11 | 264 | 2 | 252 | 2.10e-101 | 296 |
| Msa1022610 | AT2G29310.1 | 57.087 | 254 | 106 | 1 | 11 | 264 | 2 | 252 | 1.22e-99 | 292 |
| Msa1022610 | AT2G29360.1 | 55.094 | 265 | 114 | 3 | 1 | 264 | 1 | 261 | 2.70e-99 | 291 |
| Msa1022610 | AT2G29150.1 | 56.107 | 262 | 111 | 2 | 1 | 262 | 1 | 258 | 1.05e-98 | 290 |
| Msa1022610 | AT2G29330.1 | 57.480 | 254 | 105 | 2 | 11 | 264 | 2 | 252 | 1.61e-98 | 289 |
| Msa1022610 | AT2G30670.1 | 55.512 | 254 | 110 | 1 | 11 | 264 | 2 | 252 | 1.04e-97 | 287 |
| Msa1022610 | AT1G07450.1 | 55.159 | 252 | 109 | 2 | 13 | 264 | 5 | 252 | 1.77e-97 | 286 |
| Msa1022610 | AT2G29350.1 | 56.471 | 255 | 107 | 1 | 10 | 264 | 9 | 259 | 2.45e-97 | 286 |
| Msa1022610 | AT2G29370.1 | 54.651 | 258 | 113 | 2 | 8 | 264 | 7 | 261 | 6.99e-95 | 280 |
| Msa1022610 | AT2G29320.2 | 58.974 | 234 | 92 | 2 | 32 | 264 | 11 | 241 | 3.30e-93 | 275 |
| Msa1022610 | AT2G29290.1 | 54.310 | 232 | 103 | 1 | 33 | 264 | 7 | 235 | 7.63e-87 | 259 |
| Msa1022610 | AT2G29310.2 | 54.936 | 233 | 102 | 1 | 32 | 264 | 21 | 250 | 2.62e-85 | 255 |
| Msa1022610 | AT2G29350.3 | 54.464 | 224 | 98 | 1 | 41 | 264 | 2 | 221 | 2.27e-80 | 242 |
| Msa1022610 | AT2G29320.3 | 59.901 | 202 | 79 | 2 | 11 | 210 | 7 | 208 | 3.23e-80 | 241 |
| Msa1022610 | AT2G29340.3 | 58.706 | 201 | 83 | 0 | 11 | 211 | 2 | 202 | 5.94e-79 | 237 |
| Msa1022610 | AT2G29340.4 | 58.706 | 201 | 83 | 0 | 11 | 211 | 2 | 202 | 5.94e-79 | 237 |
| Msa1022610 | AT2G29350.2 | 55.721 | 201 | 89 | 0 | 10 | 210 | 9 | 209 | 2.15e-76 | 231 |
| Msa1022610 | AT2G29310.3 | 56.281 | 199 | 87 | 0 | 11 | 209 | 2 | 200 | 8.38e-76 | 229 |
| Msa1022610 | AT1G07440.2 | 56.213 | 169 | 74 | 0 | 10 | 178 | 6 | 174 | 2.37e-64 | 199 |
| Msa1022610 | AT2G29310.4 | 53.371 | 178 | 83 | 0 | 32 | 209 | 21 | 198 | 2.52e-61 | 192 |
| Msa1022610 | AT2G29170.1 | 62.500 | 96 | 35 | 1 | 8 | 102 | 7 | 102 | 1.11e-38 | 131 |
| Msa1022610 | AT4G05530.1 | 34.263 | 251 | 157 | 5 | 16 | 265 | 9 | 252 | 4.19e-34 | 124 |
| Msa1022610 | AT3G03980.1 | 32.342 | 269 | 166 | 4 | 7 | 263 | 5 | 269 | 5.61e-34 | 124 |
| Msa1022610 | AT1G54870.2 | 33.984 | 256 | 153 | 7 | 16 | 262 | 84 | 332 | 5.79e-32 | 120 |
| Msa1022610 | AT1G54870.1 | 33.984 | 256 | 153 | 7 | 16 | 262 | 82 | 330 | 5.82e-32 | 120 |
| Msa1022610 | AT3G05260.1 | 34.902 | 255 | 151 | 7 | 16 | 262 | 37 | 284 | 1.02e-31 | 119 |
| Msa1022610 | AT5G18210.1 | 33.333 | 258 | 158 | 5 | 15 | 263 | 7 | 259 | 1.99e-30 | 114 |
| Msa1022610 | AT4G13180.1 | 32.157 | 255 | 160 | 5 | 16 | 263 | 13 | 261 | 1.90e-28 | 109 |
| Msa1022610 | AT1G24360.1 | 32.794 | 247 | 150 | 7 | 22 | 262 | 80 | 316 | 4.60e-27 | 107 |
| Msa1022610 | AT5G18210.2 | 33.473 | 239 | 145 | 5 | 15 | 244 | 7 | 240 | 3.36e-26 | 103 |
| Msa1022610 | AT3G04000.1 | 33.086 | 269 | 163 | 4 | 7 | 262 | 5 | 269 | 1.59e-25 | 102 |
| Msa1022610 | AT3G12800.1 | 28.516 | 256 | 170 | 6 | 16 | 262 | 10 | 261 | 2.38e-24 | 99.4 |
| Msa1022610 | AT3G03330.1 | 30.808 | 198 | 130 | 5 | 12 | 203 | 37 | 233 | 5.68e-19 | 85.1 |
| Msa1022610 | AT1G63380.3 | 26.953 | 256 | 178 | 7 | 16 | 264 | 15 | 268 | 5.76e-19 | 84.3 |
| Msa1022610 | AT1G63380.1 | 26.953 | 256 | 178 | 7 | 16 | 264 | 17 | 270 | 6.11e-19 | 84.3 |
| Msa1022610 | AT1G63380.4 | 26.953 | 256 | 178 | 7 | 16 | 264 | 19 | 272 | 6.67e-19 | 84.3 |
| Msa1022610 | AT1G63380.2 | 26.953 | 256 | 178 | 7 | 16 | 264 | 22 | 275 | 9.12e-19 | 84.0 |
| Msa1022610 | AT1G62610.2 | 26.172 | 256 | 180 | 7 | 16 | 264 | 13 | 266 | 2.73e-18 | 82.4 |
| Msa1022610 | AT1G62610.4 | 26.172 | 256 | 180 | 7 | 16 | 264 | 19 | 272 | 2.93e-18 | 82.4 |
| Msa1022610 | AT1G62610.1 | 26.172 | 256 | 180 | 7 | 16 | 264 | 14 | 267 | 3.09e-18 | 82.4 |
| Msa1022610 | AT1G62610.3 | 26.172 | 256 | 180 | 7 | 16 | 264 | 15 | 268 | 3.29e-18 | 82.4 |
| Msa1022610 | AT3G55310.1 | 26.255 | 259 | 175 | 8 | 16 | 264 | 17 | 269 | 3.28e-17 | 79.7 |
| Msa1022610 | AT3G55290.1 | 27.099 | 262 | 169 | 9 | 16 | 264 | 18 | 270 | 6.16e-17 | 79.0 |
| Msa1022610 | AT3G55290.2 | 27.099 | 262 | 169 | 9 | 16 | 264 | 17 | 269 | 6.27e-17 | 79.0 |
| Msa1022610 | AT3G42960.1 | 29.151 | 271 | 163 | 9 | 11 | 265 | 5 | 262 | 1.31e-16 | 77.8 |
| Msa1022610 | AT3G46170.1 | 27.132 | 258 | 174 | 8 | 16 | 264 | 26 | 278 | 2.37e-16 | 77.4 |
| Msa1022610 | AT5G04900.1 | 28.643 | 199 | 125 | 6 | 22 | 208 | 83 | 276 | 9.02e-16 | 76.3 |
| Msa1022610 | AT3G47350.1 | 30.570 | 193 | 123 | 6 | 18 | 205 | 46 | 232 | 5.44e-15 | 73.9 |
| Msa1022610 | AT3G47350.2 | 30.570 | 193 | 123 | 6 | 18 | 205 | 46 | 232 | 5.83e-15 | 73.9 |
| Msa1022610 | AT5G50700.1 | 30.244 | 205 | 134 | 6 | 15 | 215 | 44 | 243 | 8.25e-15 | 73.6 |
| Msa1022610 | AT5G50600.1 | 30.244 | 205 | 134 | 6 | 15 | 215 | 44 | 243 | 8.25e-15 | 73.6 |
| Msa1022610 | AT2G17845.1 | 26.459 | 257 | 176 | 9 | 16 | 262 | 47 | 300 | 1.09e-14 | 72.8 |
| Msa1022610 | AT3G51680.1 | 27.305 | 282 | 183 | 9 | 1 | 265 | 20 | 296 | 1.39e-14 | 72.4 |
| Msa1022610 | AT4G03140.1 | 26.820 | 261 | 172 | 9 | 16 | 265 | 78 | 330 | 1.92e-14 | 72.4 |
| Msa1022610 | AT3G26760.1 | 28.185 | 259 | 172 | 7 | 16 | 264 | 36 | 290 | 2.89e-14 | 71.6 |
| Msa1022610 | AT4G13250.1 | 28.169 | 213 | 129 | 6 | 22 | 211 | 165 | 376 | 7.99e-14 | 71.2 |
| Msa1022610 | AT2G47130.1 | 28.409 | 264 | 157 | 9 | 16 | 264 | 6 | 252 | 8.54e-14 | 69.7 |
| Msa1022610 | AT1G49670.1 | 30.493 | 223 | 132 | 10 | 18 | 224 | 6 | 221 | 1.43e-13 | 70.9 |
| Msa1022610 | AT1G49670.2 | 30.493 | 223 | 132 | 10 | 18 | 224 | 6 | 221 | 1.84e-13 | 70.5 |
| Msa1022610 | AT3G47360.1 | 30.366 | 191 | 122 | 6 | 20 | 205 | 49 | 233 | 1.86e-13 | 69.3 |
| Msa1022610 | AT5G50590.2 | 28.646 | 192 | 126 | 6 | 16 | 202 | 45 | 230 | 3.68e-13 | 67.8 |
| Msa1022610 | AT5G50690.2 | 28.646 | 192 | 126 | 6 | 16 | 202 | 45 | 230 | 3.68e-13 | 67.8 |
| Msa1022610 | AT3G03350.2 | 30.636 | 173 | 107 | 4 | 36 | 203 | 188 | 352 | 3.80e-13 | 68.9 |
| Msa1022610 | AT5G50590.1 | 29.070 | 172 | 118 | 4 | 16 | 185 | 45 | 214 | 4.57e-13 | 68.2 |
| Msa1022610 | AT5G50690.1 | 29.070 | 172 | 118 | 4 | 16 | 185 | 45 | 214 | 4.57e-13 | 68.2 |
| Msa1022610 | AT1G67730.1 | 28.972 | 214 | 138 | 6 | 17 | 221 | 50 | 258 | 2.46e-12 | 66.2 |
| Msa1022610 | AT3G59710.3 | 24.306 | 288 | 161 | 7 | 13 | 253 | 13 | 290 | 8.10e-12 | 64.7 |
| Msa1022610 | AT3G59710.2 | 26.515 | 264 | 140 | 7 | 13 | 227 | 42 | 300 | 1.20e-11 | 64.3 |
| Msa1022610 | AT4G13250.2 | 27.536 | 207 | 127 | 6 | 22 | 208 | 165 | 368 | 1.43e-11 | 64.7 |
| Msa1022610 | AT4G09750.1 | 25.630 | 238 | 145 | 8 | 10 | 219 | 35 | 268 | 2.63e-11 | 63.2 |
| Msa1022610 | AT3G59710.1 | 24.739 | 287 | 159 | 8 | 14 | 253 | 24 | 300 | 4.05e-11 | 62.4 |
| Msa1022610 | AT5G10050.1 | 27.128 | 188 | 130 | 3 | 22 | 208 | 11 | 192 | 5.74e-11 | 62.0 |
Find 72 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGCTATTAATTTGATTT+TGG | 0.152434 | 7_1:+49196088 | Msa1022610:exon |
| ATTCCCATATTATCCGTTTA+TGG | 0.156544 | 7_1:+49190665 | Msa1022610:CDS |
| AACCATAATATAGCAGATTT+TGG | 0.180381 | 7_1:+49189526 | Msa1022610:five_prime_UTR |
| GTGGAAGAGTTAGCAGAATT+TGG | 0.185342 | 7_1:+49190203 | Msa1022610:CDS |
| CTTCTAAAACAATCTGGATA+TGG | 0.214489 | 7_1:+49190602 | Msa1022610:CDS |
| AACCAAAATCTGCTATATTA+TGG | 0.231045 | 7_1:-49189528 | None:intergenic |
| GGCTCCATAAACGGATAATA+TGG | 0.267329 | 7_1:-49190669 | None:intergenic |
| ATTTATTCATCTAGGGTTAT+AGG | 0.287421 | 7_1:-49196132 | None:intergenic |
| GTGTTTACTTCGTCCATTGC+TGG | 0.353879 | 7_1:+49190632 | Msa1022610:CDS |
| ACTAGTGATGATATCTCTTT+AGG | 0.358021 | 7_1:-49195990 | None:intergenic |
| ATTATTACATTTATTCATCT+AGG | 0.364177 | 7_1:-49196140 | None:intergenic |
| AGTAAGGGGTTTAATGTAAC+AGG | 0.367595 | 7_1:+49190290 | Msa1022610:CDS |
| AGAAGATATTAATAAATGTT+TGG | 0.368006 | 7_1:+49190256 | Msa1022610:CDS |
| TTTGATTATAATAAATTTGA+AGG | 0.374403 | 7_1:-49196239 | None:intergenic |
| TTGAAGGAATATAAAGATAA+TGG | 0.374913 | 7_1:-49196223 | None:intergenic |
| ACTGTTTCTTCTATCTTTCA+AGG | 0.382915 | 7_1:+49190362 | Msa1022610:CDS |
| CATCACTCTTGCAATCAATC+AGG | 0.389523 | 7_1:+49194391 | Msa1022610:CDS |
| GGTATGACTGCGTTAGTAAC+AGG | 0.416451 | 7_1:+49189630 | Msa1022610:CDS |
| TACCCTCTTCTAAAACAATC+TGG | 0.416961 | 7_1:+49190596 | Msa1022610:CDS |
| AACAAAGTTAAGCAGCTTCA+AGG | 0.417397 | 7_1:+49189587 | Msa1022610:CDS |
| TTAATAAATGTTTGGAAGAG+TGG | 0.419268 | 7_1:+49190264 | Msa1022610:CDS |
| TTCTAAAACAATCTGGATAT+GGG | 0.427451 | 7_1:+49190603 | Msa1022610:CDS |
| CTACTTTACAAACAAAATCA+AGG | 0.435504 | 7_1:+49189502 | Msa1022610:five_prime_UTR |
| GAAGATATAAACACTACAAT+TGG | 0.437311 | 7_1:+49190533 | Msa1022610:CDS |
| TGAAGAACGCAAGAAACTAA+TGG | 0.439032 | 7_1:+49190337 | Msa1022610:CDS |
| TTTGGAAGAGTGGAGAAGTA+AGG | 0.445114 | 7_1:+49190274 | Msa1022610:CDS |
| GGACAAGTTATAGCTATTGA+TGG | 0.448377 | 7_1:+49196050 | Msa1022610:CDS |
| CGTGCAAATGCTGTGGCACC+TGG | 0.452656 | 7_1:+49194357 | Msa1022610:CDS |
| TTTATAACTAACATGACTGT+TGG | 0.455029 | 7_1:-49196167 | None:intergenic |
| ACAGGTGGAACCCGAGGCAT+TGG | 0.457383 | 7_1:+49189648 | Msa1022610:CDS |
| TTATTACATTTATTCATCTA+GGG | 0.461648 | 7_1:-49196139 | None:intergenic |
| TGTAGTGTCTCAAACACCTA+TGG | 0.481462 | 7_1:+49195953 | Msa1022610:CDS |
| TCAAACACCTATGGGTCGTA+TGG | 0.482046 | 7_1:+49195962 | Msa1022610:CDS |
| TCCGTTTATGGAGCCACAAA+AGG | 0.482063 | 7_1:+49190677 | Msa1022610:CDS |
| TAAATCTTGATTGACATTGT+TGG | 0.482308 | 7_1:+49196186 | Msa1022610:three_prime_UTR |
| TTGGAAGAGTGGAGAAGTAA+GGG | 0.482971 | 7_1:+49190275 | Msa1022610:CDS |
| CGAAGAACTTAGCATTGGAA+TGG | 0.492016 | 7_1:+49194319 | Msa1022610:CDS |
| TTATAACTAACATGACTGTT+GGG | 0.492201 | 7_1:-49196166 | None:intergenic |
| AGTGATGTCTTGACAGGTCC+AGG | 0.505435 | 7_1:-49194375 | None:intergenic |
| CATTGTTGGTTGGACCTCCA+TGG | 0.509252 | 7_1:+49196200 | Msa1022610:three_prime_UTR |
| GCTCCATAAACGGATAATAT+GGG | 0.509272 | 7_1:-49190668 | None:intergenic |
| ATGAATTAGGTACGCAATTG+TGG | 0.509522 | 7_1:+49190184 | Msa1022610:intron |
| TGCAGCAGGAAGACAAAGAA+AGG | 0.535846 | 7_1:-49196015 | None:intergenic |
| CAGGTGGAACCCGAGGCATT+GGG | 0.536116 | 7_1:+49189649 | Msa1022610:CDS |
| ATTCACGAAGAACTTAGCAT+TGG | 0.539967 | 7_1:+49194314 | Msa1022610:CDS |
| GAAGAACTTAGCATTGGAAT+GGG | 0.540363 | 7_1:+49194320 | Msa1022610:CDS |
| AGGAAATTACCCAATGCCTC+GGG | 0.542864 | 7_1:-49189658 | None:intergenic |
| AAGGAAATTACCCAATGCCT+CGG | 0.548009 | 7_1:-49189659 | None:intergenic |
| TTCTTACAGAATGATGATGA+AGG | 0.553861 | 7_1:+49195912 | Msa1022610:intron |
| GAATATAAAGATAATGGCCA+TGG | 0.556357 | 7_1:-49196217 | None:intergenic |
| TCTTACAGAATGATGATGAA+GGG | 0.557071 | 7_1:+49195913 | Msa1022610:intron |
| TGGAAGAGTGGAGAAGTAAG+GGG | 0.558528 | 7_1:+49190276 | Msa1022610:CDS |
| GAAGGGGTTGAAACTGTAGA+TGG | 0.558918 | 7_1:+49195930 | Msa1022610:CDS |
| CAAACACCTATGGGTCGTAT+GGG | 0.570361 | 7_1:+49195963 | Msa1022610:CDS |
| GCAGCTTCAAGGATAAAAGA+TGG | 0.570695 | 7_1:+49189598 | Msa1022610:CDS |
| GTAGTGTCTCAAACACCTAT+GGG | 0.570940 | 7_1:+49195954 | Msa1022610:CDS |
| TCTTGATTGACATTGTTGGT+TGG | 0.577182 | 7_1:+49196190 | Msa1022610:three_prime_UTR |
| TGCAAGAGTGATGTCTTGAC+AGG | 0.582780 | 7_1:-49194381 | None:intergenic |
| AATAGCTTGTAAACCAGCAA+TGG | 0.586264 | 7_1:-49190645 | None:intergenic |
| ATCACTCTTGCAATCAATCA+GGG | 0.588577 | 7_1:+49194392 | Msa1022610:CDS |
| CCTGCTGCATCATACATCAC+TGG | 0.594030 | 7_1:+49196029 | Msa1022610:CDS |
| GGTATGCAAGTTGACACAAA+TGG | 0.595523 | 7_1:-49190577 | None:intergenic |
| TATTCATCTAGGGTTATAGG+AGG | 0.597645 | 7_1:-49196129 | None:intergenic |
| CTTACAGAATGATGATGAAG+GGG | 0.614133 | 7_1:+49195914 | Msa1022610:intron |
| GATAAAAGATGGTCACTGCA+TGG | 0.614860 | 7_1:+49189609 | Msa1022610:CDS |
| CAAGTTATAGCTATTGATGG+AGG | 0.616648 | 7_1:+49196053 | Msa1022610:CDS |
| GGCTCTCCCATACGACCCAT+AGG | 0.618378 | 7_1:-49195969 | None:intergenic |
| CCAGTGATGTATGATGCAGC+AGG | 0.633686 | 7_1:-49196029 | None:intergenic |
| TTAGTAACAGGTGGAACCCG+AGG | 0.644580 | 7_1:+49189642 | Msa1022610:CDS |
| TATAAAGATAATGGCCATGG+AGG | 0.649634 | 7_1:-49196214 | None:intergenic |
| TAATATTCGTGCAAATGCTG+TGG | 0.649939 | 7_1:+49194350 | Msa1022610:CDS |
| ATGACTGCGTTAGTAACAGG+TGG | 0.678039 | 7_1:+49189633 | Msa1022610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTATTTACATAAAAAAA+AGG | - | chr7_1:49189799-49189818 | None:intergenic | 10.0% |
| !!! | TTTTTTTATGTAAATAATTG+TGG | + | chr7_1:49189799-49189818 | Msa1022610:intron | 10.0% |
| !!! | TTATTTTTCTATTATGAATT+AGG | + | chr7_1:49190171-49190190 | Msa1022610:intron | 10.0% |
| !! | AAAGAAAAAAAAAAAATACA+TGG | - | chr7_1:49190411-49190430 | None:intergenic | 10.0% |
| !! | ATAATTTAATTAGATAAAGA+AGG | + | chr7_1:49191067-49191086 | Msa1022610:intron | 10.0% |
| !! | TAATTTAATTAGATAAAGAA+GGG | + | chr7_1:49191068-49191087 | Msa1022610:intron | 10.0% |
| !! | TTATACATAAATATCTATTA+AGG | - | chr7_1:49191981-49192000 | None:intergenic | 10.0% |
| !! | TAATTTACAATATTTAATAG+CGG | - | chr7_1:49192173-49192192 | None:intergenic | 10.0% |
| !!! | AAATTTTATTATAGAGAAAA+AGG | + | chr7_1:49194147-49194166 | Msa1022610:intron | 10.0% |
| !!! | CTTGAAATTTTTTTTTTTTT+TGG | - | chr7_1:49195593-49195612 | None:intergenic | 10.0% |
| !! | CAAAAAAAAAAAAAATTTCA+AGG | + | chr7_1:49195591-49195610 | Msa1022610:intron | 10.0% |
| !!! | ATTTTGTTTATATTTTGAAA+CGG | + | chr7_1:49195879-49195898 | Msa1022610:intron | 10.0% |
| !! | TTTGATTATAATAAATTTGA+AGG | - | chr7_1:49196242-49196261 | None:intergenic | 10.0% |
| !!! | TATAATTTTGTTGTCAAATT+GGG | + | chr7_1:49189826-49189845 | Msa1022610:intron | 15.0% |
| !! | GTTTATTTAACAAATTCAAT+CGG | + | chr7_1:49189905-49189924 | Msa1022610:intron | 15.0% |
| !! | AAAGACTATATTCATTTAAT+TGG | - | chr7_1:49190111-49190130 | None:intergenic | 15.0% |
| !! | TAGAAAAATAAGAAATAACA+AGG | - | chr7_1:49190162-49190181 | None:intergenic | 15.0% |
| !! | AGAAGATATTAATAAATGTT+TGG | + | chr7_1:49190256-49190275 | Msa1022610:CDS | 15.0% |
| !!! | TTTTATGTAGTTTTTCTTTT+AGG | + | chr7_1:49190460-49190479 | Msa1022610:intron | 15.0% |
| !!! | GAATGAAATTAATTTTCAAA+TGG | + | chr7_1:49191322-49191341 | Msa1022610:intron | 15.0% |
| !! | AAATATTTATTTGGCAATAT+TGG | + | chr7_1:49191871-49191890 | Msa1022610:intron | 15.0% |
| !!! | GATTGTTATCAATTAATTTT+AGG | + | chr7_1:49193074-49193093 | Msa1022610:intron | 15.0% |
| !! | TTTAGATGTTTGATTAAAAA+TGG | + | chr7_1:49193295-49193314 | Msa1022610:intron | 15.0% |
| !!! | TTTTTTTAAAATCTTATCCA+TGG | + | chr7_1:49193747-49193766 | Msa1022610:intron | 15.0% |
| !! | ACTTCAAAATAATAGTTTAA+AGG | - | chr7_1:49194221-49194240 | None:intergenic | 15.0% |
| !! | CAAATTTAATTAATCAATTC+AGG | + | chr7_1:49194279-49194298 | Msa1022610:intron | 15.0% |
| !!! | TTGATTATCTTTATGTTTTT+TGG | - | chr7_1:49194644-49194663 | None:intergenic | 15.0% |
| !!! | GTTTTTCTTATGATTAATAT+AGG | - | chr7_1:49194714-49194733 | None:intergenic | 15.0% |
| !! | ATGATTAAGTTTAAATTTCA+TGG | - | chr7_1:49194736-49194755 | None:intergenic | 15.0% |
| !! | ACAATAAAAAAACAAATGTT+TGG | + | chr7_1:49194997-49195016 | Msa1022610:intron | 15.0% |
| !! | TCAAATATGACAAATATTAT+GGG | - | chr7_1:49195173-49195192 | None:intergenic | 15.0% |
| !! | ATCAAATATGACAAATATTA+TGG | - | chr7_1:49195174-49195193 | None:intergenic | 15.0% |
| !! | AATATCACTTATGAAAATAA+TGG | + | chr7_1:49195717-49195736 | Msa1022610:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr7_1:49195772-49195791 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTCATTTTTT+AGG | + | chr7_1:49195781-49195800 | Msa1022610:intron | 15.0% |
| !!! | ATAAACAAAATTCACTTTTT+AGG | - | chr7_1:49195870-49195889 | None:intergenic | 15.0% |
| !!! | AATTGCTATTAATTTGATTT+TGG | + | chr7_1:49196088-49196107 | Msa1022610:exon | 15.0% |
| !! | TTATTACATTTATTCATCTA+GGG | - | chr7_1:49196142-49196161 | None:intergenic | 15.0% |
| !! | ATTATTACATTTATTCATCT+AGG | - | chr7_1:49196143-49196162 | None:intergenic | 15.0% |
| !!! | CTATAATTTTGTTGTCAAAT+TGG | + | chr7_1:49189825-49189844 | Msa1022610:intron | 20.0% |
| !!! | GTTGTTTTATGTTATTTACT+TGG | + | chr7_1:49189995-49190014 | Msa1022610:intron | 20.0% |
| !!! | TTTTATGTTATTTACTTGGT+TGG | + | chr7_1:49189999-49190018 | Msa1022610:intron | 20.0% |
| !!! | CGTTTCATTGATTAAAAAAT+AGG | + | chr7_1:49190702-49190721 | Msa1022610:intron | 20.0% |
| !! | TTAGCATATTCATATATTTC+AGG | + | chr7_1:49191008-49191027 | Msa1022610:intron | 20.0% |
| !! | TAGCATATTCATATATTTCA+GGG | + | chr7_1:49191009-49191028 | Msa1022610:intron | 20.0% |
| !! | TTTGTATTGAAAAATGAAGA+AGG | - | chr7_1:49191102-49191121 | None:intergenic | 20.0% |
| !!! | TCTTCATTTTTCAATACAAA+TGG | + | chr7_1:49191102-49191121 | Msa1022610:intron | 20.0% |
| !!! | TATACAATAATTGATGATGT+GGG | - | chr7_1:49191196-49191215 | None:intergenic | 20.0% |
| !!! | TTATACAATAATTGATGATG+TGG | - | chr7_1:49191197-49191216 | None:intergenic | 20.0% |
| !!! | TTTAGGTTACAATTTTCAAA+AGG | + | chr7_1:49191359-49191378 | Msa1022610:intron | 20.0% |
| !!! | CGTAATAATATCCATTTTAA+CGG | + | chr7_1:49191666-49191685 | Msa1022610:intron | 20.0% |
| !! | TACAATTAAATGTGAAAAAG+TGG | + | chr7_1:49191771-49191790 | Msa1022610:intron | 20.0% |
| !! | ACAATTAAATGTGAAAAAGT+GGG | + | chr7_1:49191772-49191791 | Msa1022610:intron | 20.0% |
| !! | CAATACATAATTTATGCAAT+GGG | - | chr7_1:49191813-49191832 | None:intergenic | 20.0% |
| !! | ACAATACATAATTTATGCAA+TGG | - | chr7_1:49191814-49191833 | None:intergenic | 20.0% |
| !!! | ATCTATATCGATTAATTAGT+GGG | - | chr7_1:49192025-49192044 | None:intergenic | 20.0% |
| !! | TTTATACATAAGATATCTAC+CGG | - | chr7_1:49192069-49192088 | None:intergenic | 20.0% |
| !! | GAATATGATTATTTGTTTAG+AGG | + | chr7_1:49192448-49192467 | Msa1022610:intron | 20.0% |
| !! | ATTCCTATTAAAATAACATG+GGG | - | chr7_1:49192745-49192764 | None:intergenic | 20.0% |
| !! | GATTCCTATTAAAATAACAT+GGG | - | chr7_1:49192746-49192765 | None:intergenic | 20.0% |
| !! | TGATTCCTATTAAAATAACA+TGG | - | chr7_1:49192747-49192766 | None:intergenic | 20.0% |
| !! | TTATCATAAATAAATCTCGA+TGG | - | chr7_1:49193120-49193139 | None:intergenic | 20.0% |
| !! | AGATTTATTTATGATAACTC+AGG | + | chr7_1:49193123-49193142 | Msa1022610:intron | 20.0% |
| !!! | TTTCTTTTTTTAACGAAGAA+CGG | + | chr7_1:49193402-49193421 | Msa1022610:intron | 20.0% |
| !! | ACATAAGTATAAACAAATGA+GGG | - | chr7_1:49193562-49193581 | None:intergenic | 20.0% |
| !! | AACATAAGTATAAACAAATG+AGG | - | chr7_1:49193563-49193582 | None:intergenic | 20.0% |
| !! | TTTAATATGAACCCAAAATA+TGG | + | chr7_1:49194085-49194104 | Msa1022610:intron | 20.0% |
| !!! | TATCTTTATGTTTTTTGGTT+TGG | - | chr7_1:49194639-49194658 | None:intergenic | 20.0% |
| !! | ACAAAATTTAAACATTTGAG+AGG | + | chr7_1:49194676-49194695 | Msa1022610:intron | 20.0% |
| !! | TTTCTTATGATTAATATAGG+TGG | - | chr7_1:49194711-49194730 | None:intergenic | 20.0% |
| !!! | TTTTTTTATTGTTCTGTTGT+TGG | - | chr7_1:49194989-49195008 | None:intergenic | 20.0% |
| !!! | TCAAAAAGAGTATCATTTTT+AGG | - | chr7_1:49195389-49195408 | None:intergenic | 20.0% |
| !!! | AAAACTATTTTTTGCAAATG+TGG | + | chr7_1:49195411-49195430 | Msa1022610:intron | 20.0% |
| !!! | TTTTTTTTTTTGGTACGAAA+TGG | - | chr7_1:49195583-49195602 | None:intergenic | 20.0% |
| !!! | GAGATTTTATTTTCAAACTA+TGG | + | chr7_1:49195622-49195641 | Msa1022610:intron | 20.0% |
| !! | TTGAAGGAATATAAAGATAA+TGG | - | chr7_1:49196226-49196245 | None:intergenic | 20.0% |
| ! | CTACTTTACAAACAAAATCA+AGG | + | chr7_1:49189502-49189521 | Msa1022610:five_prime_UTR | 25.0% |
| !! | AACCATAATATAGCAGATTT+TGG | + | chr7_1:49189526-49189545 | Msa1022610:five_prime_UTR | 25.0% |
| ! | AACCAAAATCTGCTATATTA+TGG | - | chr7_1:49189531-49189550 | None:intergenic | 25.0% |
| ! | GTAGTCATAAACAAGAAAAA+TGG | + | chr7_1:49189560-49189579 | Msa1022610:exon | 25.0% |
| ! | CACAAAGACAATAAACAAAA+CGG | - | chr7_1:49189855-49189874 | None:intergenic | 25.0% |
| ! | ATCGATTGAAATATTCATGT+CGG | - | chr7_1:49189958-49189977 | None:intergenic | 25.0% |
| ! | TTAATAAATGTTTGGAAGAG+TGG | + | chr7_1:49190264-49190283 | Msa1022610:CDS | 25.0% |
| !! | ATCTATTATTTTCTTCGAGA+GGG | - | chr7_1:49190504-49190523 | None:intergenic | 25.0% |
| !! | TATCTATTATTTTCTTCGAG+AGG | - | chr7_1:49190505-49190524 | None:intergenic | 25.0% |
| ! | GAAGATATAAACACTACAAT+TGG | + | chr7_1:49190533-49190552 | Msa1022610:CDS | 25.0% |
| !!! | TTCTAAAACAATCTGGATAT+GGG | + | chr7_1:49190603-49190622 | Msa1022610:CDS | 25.0% |
| !!! | GACGGATTAATAATAGTTTA+AGG | + | chr7_1:49190980-49190999 | Msa1022610:intron | 25.0% |
| ! | TGGTTGAATTGAAATACTTT+AGG | + | chr7_1:49191342-49191361 | Msa1022610:intron | 25.0% |
| ! | TTCTTCTTTGTAATTCATTG+TGG | + | chr7_1:49191391-49191410 | Msa1022610:intron | 25.0% |
| !!! | TTATTTAGTTTGACTCACAA+AGG | + | chr7_1:49191442-49191461 | Msa1022610:intron | 25.0% |
| !!! | TAATATCCATTTTAACGGAA+AGG | + | chr7_1:49191671-49191690 | Msa1022610:intron | 25.0% |
| ! | CAATTAAATGTGAAAAAGTG+GGG | + | chr7_1:49191773-49191792 | Msa1022610:intron | 25.0% |
| !! | CATCTATATCGATTAATTAG+TGG | - | chr7_1:49192026-49192045 | None:intergenic | 25.0% |
| !! | CATCTATATCGATTAATTAG+TGG | - | chr7_1:49192026-49192045 | None:intergenic | 25.0% |
| ! | CTAATTAATCGATATAGATG+CGG | + | chr7_1:49192026-49192045 | Msa1022610:intron | 25.0% |
| !!! | ACAATATTTAATAGCGGATA+TGG | - | chr7_1:49192167-49192186 | None:intergenic | 25.0% |
| !!! | TAGGAAGTTGAAAAGTATTA+AGG | - | chr7_1:49192205-49192224 | None:intergenic | 25.0% |
| !!! | TATTACACTCCTTTTTTTTG+TGG | + | chr7_1:49192282-49192301 | Msa1022610:intron | 25.0% |
| ! | GCAAAATAGATTCAGATAAT+GGG | - | chr7_1:49192713-49192732 | None:intergenic | 25.0% |
| ! | TTCCTATTAAAATAACATGG+GGG | - | chr7_1:49192744-49192763 | None:intergenic | 25.0% |
| ! | TTGATTTAGTAATTTCCAGA+AGG | + | chr7_1:49192876-49192895 | Msa1022610:intron | 25.0% |
| ! | TAAAAGAAGAATCTAACGAA+GGG | - | chr7_1:49192994-49193013 | None:intergenic | 25.0% |
| ! | TTAAAAGAAGAATCTAACGA+AGG | - | chr7_1:49192995-49193014 | None:intergenic | 25.0% |
| ! | CTTAGAAAACTTCATCTAAA+TGG | + | chr7_1:49193031-49193050 | Msa1022610:intron | 25.0% |
| ! | TTAGGAAAGAAATATTGAGA+TGG | + | chr7_1:49193092-49193111 | Msa1022610:intron | 25.0% |
| ! | ACATCCACATGAATAATATT+GGG | - | chr7_1:49193164-49193183 | None:intergenic | 25.0% |
| ! | AACATCCACATGAATAATAT+TGG | - | chr7_1:49193165-49193184 | None:intergenic | 25.0% |
| ! | TGGATTTCATATTTATCGAA+CGG | + | chr7_1:49193849-49193868 | Msa1022610:intron | 25.0% |
| ! | TCATACTCTTAAGATAAGAT+AGG | - | chr7_1:49193979-49193998 | None:intergenic | 25.0% |
| !! | GTGCTTTTCTTTACTATTTT+TGG | + | chr7_1:49194115-49194134 | Msa1022610:intron | 25.0% |
| ! | TTAATTAATCAATTCAGGAG+CGG | + | chr7_1:49194284-49194303 | Msa1022610:intron | 25.0% |
| ! | TTGAGAATATACAATAGTCA+AGG | + | chr7_1:49194580-49194599 | Msa1022610:intron | 25.0% |
| ! | ATAAGGTTTACTTATCACAA+TGG | - | chr7_1:49194778-49194797 | None:intergenic | 25.0% |
| !! | AAGATTGTCTTGATTTGATT+TGG | - | chr7_1:49194867-49194886 | None:intergenic | 25.0% |
| ! | TTGCACATAACATTCATTAA+AGG | + | chr7_1:49195326-49195345 | Msa1022610:intron | 25.0% |
| ! | ATTGTAGGAATAAAATCTCA+AGG | + | chr7_1:49195439-49195458 | Msa1022610:intron | 25.0% |
| !! | TTGTGTGTGTGATTTTATAA+TGG | + | chr7_1:49195552-49195571 | Msa1022610:intron | 25.0% |
| !! | AGACAATAGATTAGTCAATT+GGG | - | chr7_1:49195680-49195699 | None:intergenic | 25.0% |
| !! | AAGACAATAGATTAGTCAAT+TGG | - | chr7_1:49195681-49195700 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr7_1:49195806-49195825 | Msa1022610:intron | 25.0% |
| ! | TAGGTTCATTCATTTAATGA+TGG | - | chr7_1:49195800-49195819 | None:intergenic | 25.0% |
| !!! | TTGTTTATATTTTGAAACGG+AGG | + | chr7_1:49195882-49195901 | Msa1022610:intron | 25.0% |
| !!! | TGTTTATATTTTGAAACGGA+GGG | + | chr7_1:49195883-49195902 | Msa1022610:intron | 25.0% |
| !! | ATTTATTCATCTAGGGTTAT+AGG | - | chr7_1:49196135-49196154 | None:intergenic | 25.0% |
| ! | TTATAACTAACATGACTGTT+GGG | - | chr7_1:49196169-49196188 | None:intergenic | 25.0% |
| ! | TTTATAACTAACATGACTGT+TGG | - | chr7_1:49196170-49196189 | None:intergenic | 25.0% |
| ! | TAAATCTTGATTGACATTGT+TGG | + | chr7_1:49196186-49196205 | Msa1022610:three_prime_UTR | 25.0% |
| TGTCGTTAAGAGTTAAGATA+AGG | - | chr7_1:49189681-49189700 | None:intergenic | 30.0% | |
| TAAAAAAAAGGGAAGAACGA+TGG | - | chr7_1:49189787-49189806 | None:intergenic | 30.0% | |
| TCGATTGAAATATTCATGTC+GGG | - | chr7_1:49189957-49189976 | None:intergenic | 30.0% | |
| ! | ACTGTTTCTTCTATCTTTCA+AGG | + | chr7_1:49190362-49190381 | Msa1022610:CDS | 30.0% |
| GAAAGCTCAATATTCTAGTA+CGG | + | chr7_1:49190384-49190403 | Msa1022610:intron | 30.0% | |
| ! | TCTATTATTTTCTTCGAGAG+GGG | - | chr7_1:49190503-49190522 | None:intergenic | 30.0% |
| ! | ATTGGTACAAATTTTGTGTC+TGG | + | chr7_1:49190551-49190570 | Msa1022610:CDS | 30.0% |
| !!! | ATCCAGATTGTTTTAGAAGA+GGG | - | chr7_1:49190601-49190620 | None:intergenic | 30.0% |
| !!! | TATCCAGATTGTTTTAGAAG+AGG | - | chr7_1:49190602-49190621 | None:intergenic | 30.0% |
| !! | CTTCTAAAACAATCTGGATA+TGG | + | chr7_1:49190602-49190621 | Msa1022610:CDS | 30.0% |
| ATTCCCATATTATCCGTTTA+TGG | + | chr7_1:49190665-49190684 | Msa1022610:CDS | 30.0% | |
| !!! | CTTGCTTTTTAGAGATTTCA+GGG | - | chr7_1:49190926-49190945 | None:intergenic | 30.0% |
| !!! | TCTTGCTTTTTAGAGATTTC+AGG | - | chr7_1:49190927-49190946 | None:intergenic | 30.0% |
| ATTAGATAAAGAAGGGAGTT+CGG | + | chr7_1:49191075-49191094 | Msa1022610:intron | 30.0% | |
| CTTAAAAGAACACAACATTG+TGG | - | chr7_1:49191259-49191278 | None:intergenic | 30.0% | |
| ! | CAATGTTGTGTTCTTTTAAG+TGG | + | chr7_1:49191259-49191278 | Msa1022610:intron | 30.0% |
| ! | AGGTTACAATTTTCAAAAGG+TGG | + | chr7_1:49191362-49191381 | Msa1022610:intron | 30.0% |
| TTTGTAATTCATTGTGGAGA+AGG | + | chr7_1:49191397-49191416 | Msa1022610:intron | 30.0% | |
| TTTGACCAAACCAAAATTCT+TGG | - | chr7_1:49191502-49191521 | None:intergenic | 30.0% | |
| ! | TTTCTCTTGGTGTATTTAGT+TGG | + | chr7_1:49191641-49191660 | Msa1022610:intron | 30.0% |
| TATCAAATGAGCTAAACTCA+CGG | + | chr7_1:49191836-49191855 | Msa1022610:intron | 30.0% | |
| !! | TATTTGGCAATATTGGTTCA+TGG | + | chr7_1:49191878-49191897 | Msa1022610:intron | 30.0% |
| CGATATAGATGCAGATTTAA+TGG | + | chr7_1:49192035-49192054 | Msa1022610:intron | 30.0% | |
| !!! | AACACTAAGGTTTTTTGCTT+AGG | - | chr7_1:49192224-49192243 | None:intergenic | 30.0% |
| TAATAACACTCACAACACTA+AGG | - | chr7_1:49192237-49192256 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr7_1:49192330-49192349 | None:intergenic | 30.0% | |
| !!! | AGCAAGAAACTTTGTTTTTG+TGG | + | chr7_1:49192426-49192445 | Msa1022610:intron | 30.0% |
| !!! | AGAGCACTTTTAAAATGAGA+GGG | + | chr7_1:49192483-49192502 | Msa1022610:intron | 30.0% |
| CAATTTCTCATTCTCAATCA+CGG | + | chr7_1:49192674-49192693 | Msa1022610:intron | 30.0% | |
| GGCAAAATAGATTCAGATAA+TGG | - | chr7_1:49192714-49192733 | None:intergenic | 30.0% | |
| TTAAAATAACATGGGGGATA+TGG | - | chr7_1:49192738-49192757 | None:intergenic | 30.0% | |
| !!! | ATCCCCCATGTTATTTTAAT+AGG | + | chr7_1:49192739-49192758 | Msa1022610:intron | 30.0% |
| ATTGTGATAAGAAAGAGATG+AGG | - | chr7_1:49192784-49192803 | None:intergenic | 30.0% | |
| !! | AAGTTTTCTAAGCTGATTCA+CGG | - | chr7_1:49193023-49193042 | None:intergenic | 30.0% |
| GATTAAGGGAATTAAATAGC+AGG | - | chr7_1:49193212-49193231 | None:intergenic | 30.0% | |
| !! | TAAATGTCAGCATCGATTAA+GGG | - | chr7_1:49193226-49193245 | None:intergenic | 30.0% |
| !! | ATAAATGTCAGCATCGATTA+AGG | - | chr7_1:49193227-49193246 | None:intergenic | 30.0% |
| AAACATCTAAAGAGAAGTTG+GGG | - | chr7_1:49193286-49193305 | None:intergenic | 30.0% | |
| CAAACATCTAAAGAGAAGTT+GGG | - | chr7_1:49193287-49193306 | None:intergenic | 30.0% | |
| TCAAACATCTAAAGAGAAGT+TGG | - | chr7_1:49193288-49193307 | None:intergenic | 30.0% | |
| !!! | TTTTTTAACGAAGAACGGAA+AGG | + | chr7_1:49193407-49193426 | Msa1022610:intron | 30.0% |
| !!! | AGAGGACTTTTAAAATGAGA+GGG | - | chr7_1:49193528-49193547 | None:intergenic | 30.0% |
| TTCATATTTATCGAACGGAA+CGG | + | chr7_1:49193854-49193873 | Msa1022610:intron | 30.0% | |
| !!! | TGAAACCTTTGTTTTTTCAG+AGG | + | chr7_1:49193942-49193961 | Msa1022610:intron | 30.0% |
| GAACCCAAAATATGGTTTAA+AGG | + | chr7_1:49194093-49194112 | Msa1022610:intron | 30.0% | |
| ! | GCACCTTTAAACCATATTTT+GGG | - | chr7_1:49194099-49194118 | None:intergenic | 30.0% |
| ! | AGCACCTTTAAACCATATTT+TGG | - | chr7_1:49194100-49194119 | None:intergenic | 30.0% |
| !!! | CTTTATGTTTTTTGGTTTGG+TGG | - | chr7_1:49194636-49194655 | None:intergenic | 30.0% |
| TTATAGACAATCATGATTGC+CGG | + | chr7_1:49194794-49194813 | Msa1022610:intron | 30.0% | |
| ! | TGGTTGCGATTCTTTTAAAT+TGG | + | chr7_1:49194826-49194845 | Msa1022610:intron | 30.0% |
| ATATCAACCACATGACAAAA+AGG | + | chr7_1:49194905-49194924 | Msa1022610:intron | 30.0% | |
| TGACAAATATTATGGGAAGT+AGG | - | chr7_1:49195166-49195185 | None:intergenic | 30.0% | |
| TATAAAATCACACACACAAG+TGG | - | chr7_1:49195551-49195570 | None:intergenic | 30.0% | |
| CTATTGTCTTATGAGAATTG+TGG | + | chr7_1:49195691-49195710 | Msa1022610:intron | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr7_1:49195768-49195787 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr7_1:49195769-49195788 | None:intergenic | 30.0% |
| GATGTATGTGGTTCATAATA+TGG | + | chr7_1:49195818-49195837 | Msa1022610:intron | 30.0% | |
| !! | CATTCATTTAATGATGGATG+TGG | - | chr7_1:49195845-49195864 | None:intergenic | 30.0% |
| ! | TTCTTACAGAATGATGATGA+AGG | + | chr7_1:49195912-49195931 | Msa1022610:intron | 30.0% |
| ! | TCTTACAGAATGATGATGAA+GGG | + | chr7_1:49195913-49195932 | Msa1022610:intron | 30.0% |
| ACTAGTGATGATATCTCTTT+AGG | - | chr7_1:49195993-49196012 | None:intergenic | 30.0% | |
| ! | GAATATAAAGATAATGGCCA+TGG | - | chr7_1:49196220-49196239 | None:intergenic | 30.0% |
| AACAAAGTTAAGCAGCTTCA+AGG | + | chr7_1:49189587-49189606 | Msa1022610:CDS | 35.0% | |
| GTTCGTATGTTCATTCTTCA+CGG | + | chr7_1:49190031-49190050 | Msa1022610:intron | 35.0% | |
| ATGAATTAGGTACGCAATTG+TGG | + | chr7_1:49190184-49190203 | Msa1022610:intron | 35.0% | |
| AGTAAGGGGTTTAATGTAAC+AGG | + | chr7_1:49190290-49190309 | Msa1022610:CDS | 35.0% | |
| TGAAGAACGCAAGAAACTAA+TGG | + | chr7_1:49190337-49190356 | Msa1022610:CDS | 35.0% | |
| !! | TACCCTCTTCTAAAACAATC+TGG | + | chr7_1:49190596-49190615 | Msa1022610:CDS | 35.0% |
| ! | AATAGCTTGTAAACCAGCAA+TGG | - | chr7_1:49190648-49190667 | None:intergenic | 35.0% |
| GCTCCATAAACGGATAATAT+GGG | - | chr7_1:49190671-49190690 | None:intergenic | 35.0% | |
| ! | TCAATGAAACGTACCTTTTG+TGG | - | chr7_1:49190693-49190712 | None:intergenic | 35.0% |
| ! | TTTTGGCAGAACAAAATGTC+AGG | - | chr7_1:49190809-49190828 | None:intergenic | 35.0% |
| CGTTTGTAATTACAGTGATG+TGG | - | chr7_1:49190873-49190892 | None:intergenic | 35.0% | |
| ATTTCAGGGACTAATTACAG+GGG | - | chr7_1:49190912-49190931 | None:intergenic | 35.0% | |
| GATTTCAGGGACTAATTACA+GGG | - | chr7_1:49190913-49190932 | None:intergenic | 35.0% | |
| AGATTTCAGGGACTAATTAC+AGG | - | chr7_1:49190914-49190933 | None:intergenic | 35.0% | |
| TAGTTTGACTCACAAAGGTT+TGG | + | chr7_1:49191447-49191466 | Msa1022610:intron | 35.0% | |
| GTGTATGAGAAAATCTTGTG+TGG | + | chr7_1:49191469-49191488 | Msa1022610:intron | 35.0% | |
| CAAACCAAAATTCTTGGTCT+TGG | - | chr7_1:49191496-49191515 | None:intergenic | 35.0% | |
| !!! | CAAGACCAAGAATTTTGGTT+TGG | + | chr7_1:49191494-49191513 | Msa1022610:intron | 35.0% |
| TGTGACCAAACCAAAATTCT+TGG | + | chr7_1:49191600-49191619 | Msa1022610:intron | 35.0% | |
| !!! | CATGACCAAGAATTTTGGTT+TGG | - | chr7_1:49191608-49191627 | None:intergenic | 35.0% |
| CAAACCAAAATTCTTGGTCA+TGG | + | chr7_1:49191606-49191625 | Msa1022610:intron | 35.0% | |
| AAAGGTGACGAACATATAAG+AGG | + | chr7_1:49191689-49191708 | Msa1022610:intron | 35.0% | |
| ! | ATGTGAAAAAGTGGGGTATT+TGG | + | chr7_1:49191780-49191799 | Msa1022610:intron | 35.0% |
| ! | TGTGAAAAAGTGGGGTATTT+GGG | + | chr7_1:49191781-49191800 | Msa1022610:intron | 35.0% |
| ! | GTGAGTTTAGCTCATTTGAT+AGG | - | chr7_1:49191837-49191856 | None:intergenic | 35.0% |
| ATCAAATGAGCTAAACTCAC+GGG | + | chr7_1:49191837-49191856 | Msa1022610:intron | 35.0% | |
| !! | TATTGGTTCATGGTAAGAGT+AGG | + | chr7_1:49191888-49191907 | Msa1022610:intron | 35.0% |
| ! | ATTGGTTCATGGTAAGAGTA+GGG | + | chr7_1:49191889-49191908 | Msa1022610:intron | 35.0% |
| ! | ATTTTATCCACGGATATCCA+CGG | - | chr7_1:49191935-49191954 | None:intergenic | 35.0% |
| AGATTTAATGGTATCTGCAC+CGG | + | chr7_1:49192047-49192066 | Msa1022610:intron | 35.0% | |
| CGATATAGATGCGGATTTAA+TGG | + | chr7_1:49192122-49192141 | Msa1022610:intron | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | - | chr7_1:49192323-49192342 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | - | chr7_1:49192324-49192343 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | - | chr7_1:49192325-49192344 | None:intergenic | 35.0% | |
| CTGTATTACGCTCCTTTAAA+AGG | + | chr7_1:49192378-49192397 | Msa1022610:intron | 35.0% | |
| ! | CCACTTTCACTACCTTTTAA+AGG | - | chr7_1:49192393-49192412 | None:intergenic | 35.0% |
| ! | CCTTTAAAAGGTAGTGAAAG+TGG | + | chr7_1:49192390-49192409 | Msa1022610:intron | 35.0% |
| TAAAAGGTAGTGAAAGTGGT+CGG | + | chr7_1:49192394-49192413 | Msa1022610:intron | 35.0% | |
| !!! | GAGAGCACTTTTAAAATGAG+AGG | + | chr7_1:49192482-49192501 | Msa1022610:intron | 35.0% |
| !!! | TTTTAAAATGAGAGGGTGAG+AGG | + | chr7_1:49192490-49192509 | Msa1022610:intron | 35.0% |
| AGCCCTTAGATCAAATTGTA+CGG | + | chr7_1:49192523-49192542 | Msa1022610:intron | 35.0% | |
| CACCGTACAATTTGATCTAA+GGG | - | chr7_1:49192528-49192547 | None:intergenic | 35.0% | |
| ! | CCTGTGCAATTAATTTTGTG+TGG | - | chr7_1:49192564-49192583 | None:intergenic | 35.0% |
| CCACACAAAATTAATTGCAC+AGG | + | chr7_1:49192561-49192580 | Msa1022610:intron | 35.0% | |
| !!! | TGATTAGCCTTAAGCTGTTT+TGG | - | chr7_1:49192650-49192669 | None:intergenic | 35.0% |
| CGTGATTGAGAATGAGAAAT+TGG | - | chr7_1:49192676-49192695 | None:intergenic | 35.0% | |
| !! | AGATAATGGGTTCCAGAAAT+TGG | - | chr7_1:49192700-49192719 | None:intergenic | 35.0% |
| ATCAACAACAACGCTTCTAT+TGG | - | chr7_1:49192861-49192880 | None:intergenic | 35.0% | |
| AATCATATGTCTTCACCTTC+TGG | - | chr7_1:49192894-49192913 | None:intergenic | 35.0% | |
| ! | AAGGGATTTTGCTTATGGAA+AGG | - | chr7_1:49192976-49192995 | None:intergenic | 35.0% |
| ! | TAACGAAGGGATTTTGCTTA+TGG | - | chr7_1:49192981-49193000 | None:intergenic | 35.0% |
| TGCACCCAATATTATTCATG+TGG | + | chr7_1:49193157-49193176 | Msa1022610:intron | 35.0% | |
| !!! | TTTTAAAATGAGAGGGTGAG+AGG | - | chr7_1:49192490-49192509 | None:intergenic | 35.0% |
| !!! | GAGAGGACTTTTAAAATGAG+AGG | - | chr7_1:49193529-49193548 | None:intergenic | 35.0% |
| !!! | ATAGATTTTGAGATATCCGC+GGG | - | chr7_1:49193785-49193804 | None:intergenic | 35.0% |
| !!! | CATAGATTTTGAGATATCCG+CGG | - | chr7_1:49193786-49193805 | None:intergenic | 35.0% |
| ! | TCTATGGATTATCCGCTAAA+CGG | + | chr7_1:49193800-49193819 | Msa1022610:intron | 35.0% |
| ATATTCTATCCATATCTGCG+CGG | - | chr7_1:49193830-49193849 | None:intergenic | 35.0% | |
| ATCCATTTACATCCCTAAGT+AGG | + | chr7_1:49193909-49193928 | Msa1022610:intron | 35.0% | |
| ATTCACGAAGAACTTAGCAT+TGG | + | chr7_1:49194314-49194333 | Msa1022610:CDS | 35.0% | |
| ! | GAAGAACTTAGCATTGGAAT+GGG | + | chr7_1:49194320-49194339 | Msa1022610:CDS | 35.0% |
| TAATATTCGTGCAAATGCTG+TGG | + | chr7_1:49194350-49194369 | Msa1022610:CDS | 35.0% | |
| ATCACTCTTGCAATCAATCA+GGG | + | chr7_1:49194392-49194411 | Msa1022610:CDS | 35.0% | |
| GGCAATCATGATTGTCTATA+AGG | - | chr7_1:49194795-49194814 | None:intergenic | 35.0% | |
| TTCCTTCCACACAAAAAGAT+GGG | + | chr7_1:49195038-49195057 | Msa1022610:intron | 35.0% | |
| ! | TTTAACCCCATCTTTTTGTG+TGG | - | chr7_1:49195047-49195066 | None:intergenic | 35.0% |
| GCAAATGTGGCAAATATTGT+AGG | + | chr7_1:49195424-49195443 | Msa1022610:intron | 35.0% | |
| GGGAAAATGCCAAAATTGTT+AGG | + | chr7_1:49195489-49195508 | Msa1022610:intron | 35.0% | |
| AAATGCCAAAATTGTTAGGC+CGG | + | chr7_1:49195493-49195512 | Msa1022610:intron | 35.0% | |
| ! | CTTACAGAATGATGATGAAG+GGG | + | chr7_1:49195914-49195933 | Msa1022610:intron | 35.0% |
| GGACAAGTTATAGCTATTGA+TGG | + | chr7_1:49196050-49196069 | Msa1022610:CDS | 35.0% | |
| CAAGTTATAGCTATTGATGG+AGG | + | chr7_1:49196053-49196072 | Msa1022610:CDS | 35.0% | |
| ! | TATTCATCTAGGGTTATAGG+AGG | - | chr7_1:49196132-49196151 | None:intergenic | 35.0% |
| TCTTGATTGACATTGTTGGT+TGG | + | chr7_1:49196190-49196209 | Msa1022610:three_prime_UTR | 35.0% | |
| ! | TATAAAGATAATGGCCATGG+AGG | - | chr7_1:49196217-49196236 | None:intergenic | 35.0% |
| GCAGCTTCAAGGATAAAAGA+TGG | + | chr7_1:49189598-49189617 | Msa1022610:CDS | 40.0% | |
| GATAAAAGATGGTCACTGCA+TGG | + | chr7_1:49189609-49189628 | Msa1022610:CDS | 40.0% | |
| AAGGAAATTACCCAATGCCT+CGG | - | chr7_1:49189662-49189681 | None:intergenic | 40.0% | |
| GTGGAAGAGTTAGCAGAATT+TGG | + | chr7_1:49190203-49190222 | Msa1022610:CDS | 40.0% | |
| TTTGGAAGAGTGGAGAAGTA+AGG | + | chr7_1:49190274-49190293 | Msa1022610:CDS | 40.0% | |
| TTGGAAGAGTGGAGAAGTAA+GGG | + | chr7_1:49190275-49190294 | Msa1022610:CDS | 40.0% | |
| ! | GGTATGCAAGTTGACACAAA+TGG | - | chr7_1:49190580-49190599 | None:intergenic | 40.0% |
| GGCTCCATAAACGGATAATA+TGG | - | chr7_1:49190672-49190691 | None:intergenic | 40.0% | |
| ! | ACCTTTTGTGGCTCCATAAA+CGG | - | chr7_1:49190681-49190700 | None:intergenic | 40.0% |
| TGTGTTTAGACACTGCAAAC+AGG | + | chr7_1:49190749-49190768 | Msa1022610:intron | 40.0% | |
| GTGTTTAGACACTGCAAACA+GGG | + | chr7_1:49190750-49190769 | Msa1022610:intron | 40.0% | |
| TGTTTAGACACTGCAAACAG+GGG | + | chr7_1:49190751-49190770 | Msa1022610:intron | 40.0% | |
| TGGCAGTAATTAACTGGAGA+GGG | - | chr7_1:49190853-49190872 | None:intergenic | 40.0% | |
| GTGATGTGGCAGTAATTAAC+TGG | - | chr7_1:49190859-49190878 | None:intergenic | 40.0% | |
| AGTCTTGAACCCAACATTCA+CGG | - | chr7_1:49190955-49190974 | None:intergenic | 40.0% | |
| TGGGTTCAAGACTTCTTTGA+CGG | + | chr7_1:49190962-49190981 | Msa1022610:intron | 40.0% | |
| TCATTGTGGAGAAGGAAGAA+TGG | + | chr7_1:49191405-49191424 | Msa1022610:intron | 40.0% | |
| ! | TGGACCAAGACCAAGAATTT+TGG | + | chr7_1:49191489-49191508 | Msa1022610:intron | 40.0% |
| GAGAGAAAAGAAGAGAGAGA+AGG | + | chr7_1:49191562-49191581 | Msa1022610:intron | 40.0% | |
| ! | TGGACCATGACCAAGAATTT+TGG | - | chr7_1:49191613-49191632 | None:intergenic | 40.0% |
| TCGTCACCTTTCCGTTAAAA+TGG | - | chr7_1:49191680-49191699 | None:intergenic | 40.0% | |
| !! | ATTTTTGTCAGCTAGCCTAG+TGG | + | chr7_1:49191738-49191757 | Msa1022610:intron | 40.0% |
| ! | TTGTATGAGCTCTAACCACT+AGG | - | chr7_1:49191756-49191775 | None:intergenic | 40.0% |
| ! | GTGAAAAAGTGGGGTATTTG+GGG | + | chr7_1:49191782-49191801 | Msa1022610:intron | 40.0% |
| TCAAATGAGCTAAACTCACG+GGG | + | chr7_1:49191838-49191857 | Msa1022610:intron | 40.0% | |
| ! | TTTTATCCACGGATATCCAC+GGG | - | chr7_1:49191934-49191953 | None:intergenic | 40.0% |
| GGATTTAATGGTATCTGCAC+CGG | + | chr7_1:49192134-49192153 | Msa1022610:intron | 40.0% | |
| ! | TAGCGGATATGGATATCTAC+CGG | - | chr7_1:49192156-49192175 | None:intergenic | 40.0% |
| CCTCGATCACCACAAAAAAA+AGG | - | chr7_1:49192294-49192313 | None:intergenic | 40.0% | |
| !!! | CCTTTTTTTTGTGGTGATCG+AGG | + | chr7_1:49192291-49192310 | Msa1022610:intron | 40.0% |
| GCACCGTACAATTTGATCTA+AGG | - | chr7_1:49192529-49192548 | None:intergenic | 40.0% | |
| TCTCACTCCAAAACAGCTTA+AGG | + | chr7_1:49192640-49192659 | Msa1022610:intron | 40.0% | |
| AAATAACATGGGGGATATGG+AGG | - | chr7_1:49192735-49192754 | None:intergenic | 40.0% | |
| TGGAAAGGAAAGAGATGAAG+AGG | - | chr7_1:49192961-49192980 | None:intergenic | 40.0% | |
| TTCACTGGATTTCTTGGACA+AGG | - | chr7_1:49193363-49193382 | None:intergenic | 40.0% | |
| TGCATCTTCACTGGATTTCT+TGG | - | chr7_1:49193369-49193388 | None:intergenic | 40.0% | |
| ACAAACTTCTGCATCTTCAC+TGG | - | chr7_1:49193378-49193397 | None:intergenic | 40.0% | |
| CGCGGATATCTCAAAATCTA+TGG | + | chr7_1:49193784-49193803 | Msa1022610:intron | 40.0% | |
| GCGCAGATATGGATAGAATA+TGG | + | chr7_1:49193829-49193848 | Msa1022610:intron | 40.0% | |
| TATCACACTATCTGCATCCA+TGG | + | chr7_1:49193884-49193903 | Msa1022610:intron | 40.0% | |
| GGGATGTAAATGGATATCCA+TGG | - | chr7_1:49193904-49193923 | None:intergenic | 40.0% | |
| CTCCTACTTAGGGATGTAAA+TGG | - | chr7_1:49193914-49193933 | None:intergenic | 40.0% | |
| CATTTCTACGCTCCTACTTA+GGG | - | chr7_1:49193924-49193943 | None:intergenic | 40.0% | |
| TCATTTCTACGCTCCTACTT+AGG | - | chr7_1:49193925-49193944 | None:intergenic | 40.0% | |
| ! | CCACTCCTCTGAAAAAACAA+AGG | - | chr7_1:49193950-49193969 | None:intergenic | 40.0% |
| !!! | CCTTTGTTTTTTCAGAGGAG+TGG | + | chr7_1:49193947-49193966 | Msa1022610:intron | 40.0% |
| ! | CGAAGAACTTAGCATTGGAA+TGG | + | chr7_1:49194319-49194338 | Msa1022610:CDS | 40.0% |
| CATCACTCTTGCAATCAATC+AGG | + | chr7_1:49194391-49194410 | Msa1022610:CDS | 40.0% | |
| ! | GTTTGGTGGCTATGTTTGTT+TGG | - | chr7_1:49194622-49194641 | None:intergenic | 40.0% |
| ATGATTGCCGGAAAATCACA+TGG | + | chr7_1:49194806-49194825 | Msa1022610:intron | 40.0% | |
| ! | ATCGCAACCATGTGATTTTC+CGG | - | chr7_1:49194816-49194835 | None:intergenic | 40.0% |
| ! | GTCATGTGGTTGATATCTCA+TGG | - | chr7_1:49194901-49194920 | None:intergenic | 40.0% |
| AACCACATGACAAAAAGGTG+TGG | + | chr7_1:49194910-49194929 | Msa1022610:intron | 40.0% | |
| ! | AACCACACCTTTTTGTCATG+TGG | - | chr7_1:49194915-49194934 | None:intergenic | 40.0% |
| GTTCTGTTGTTGGCAAATCA+TGG | - | chr7_1:49194979-49194998 | None:intergenic | 40.0% | |
| CTTCCTTCCACACAAAAAGA+TGG | + | chr7_1:49195037-49195056 | Msa1022610:intron | 40.0% | |
| TCCTTCCACACAAAAAGATG+GGG | + | chr7_1:49195039-49195058 | Msa1022610:intron | 40.0% | |
| AAAATCACACACACAAGTGG+AGG | - | chr7_1:49195548-49195567 | None:intergenic | 40.0% | |
| ! | CAAACTATGGACTGTGTGTT+TGG | + | chr7_1:49195635-49195654 | Msa1022610:intron | 40.0% |
| TGTAGTGTCTCAAACACCTA+TGG | + | chr7_1:49195953-49195972 | Msa1022610:CDS | 40.0% | |
| GTAGTGTCTCAAACACCTAT+GGG | + | chr7_1:49195954-49195973 | Msa1022610:CDS | 40.0% | |
| GGTATGACTGCGTTAGTAAC+AGG | + | chr7_1:49189630-49189649 | Msa1022610:CDS | 45.0% | |
| ATGACTGCGTTAGTAACAGG+TGG | + | chr7_1:49189633-49189652 | Msa1022610:CDS | 45.0% | |
| AGGAAATTACCCAATGCCTC+GGG | - | chr7_1:49189661-49189680 | None:intergenic | 45.0% | |
| TGGAAGAGTGGAGAAGTAAG+GGG | + | chr7_1:49190276-49190295 | Msa1022610:CDS | 45.0% | |
| GTGTTTACTTCGTCCATTGC+TGG | + | chr7_1:49190632-49190651 | Msa1022610:CDS | 45.0% | |
| TCCGTTTATGGAGCCACAAA+AGG | + | chr7_1:49190677-49190696 | Msa1022610:CDS | 45.0% | |
| GTGGCAGTAATTAACTGGAG+AGG | - | chr7_1:49190854-49190873 | None:intergenic | 45.0% | |
| !! | AAGAGAGTGCCGTGAATGTT+GGG | + | chr7_1:49190943-49190962 | Msa1022610:intron | 45.0% |
| GTAGTGAGTCCTACACTTAG+TGG | + | chr7_1:49191168-49191187 | Msa1022610:intron | 45.0% | |
| ATGTGGGATCCACTAAGTGT+AGG | - | chr7_1:49191180-49191199 | None:intergenic | 45.0% | |
| GTCCACACAAGTGTTTCTCT+TGG | + | chr7_1:49191628-49191647 | Msa1022610:intron | 45.0% | |
| CACCAAGAGAAACACTTGTG+TGG | - | chr7_1:49191633-49191652 | None:intergenic | 45.0% | |
| GGTGACGAACATATAAGAGG+TGG | + | chr7_1:49191692-49191711 | Msa1022610:intron | 45.0% | |
| GTTCATGGTAAGAGTAGGGA+TGG | + | chr7_1:49191893-49191912 | Msa1022610:intron | 45.0% | |
| GCAAAAAAAATTCGCACCCG+TGG | + | chr7_1:49191915-49191934 | Msa1022610:intron | 45.0% | |
| ! | TCCATGGGGGATTTTATCCA+CGG | - | chr7_1:49191945-49191964 | None:intergenic | 45.0% |
| TATCTGATCTGTGTCCATGG+GGG | - | chr7_1:49191958-49191977 | None:intergenic | 45.0% | |
| GTATCTGATCTGTGTCCATG+GGG | - | chr7_1:49191959-49191978 | None:intergenic | 45.0% | |
| GGTATCTGATCTGTGTCCAT+GGG | - | chr7_1:49191960-49191979 | None:intergenic | 45.0% | |
| AGGTATCTGATCTGTGTCCA+TGG | - | chr7_1:49191961-49191980 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+CGG | - | chr7_1:49192352-49192371 | None:intergenic | 45.0% |
| TCTTGTGAGCTTAGCTCAGT+TGG | - | chr7_1:49192357-49192376 | None:intergenic | 45.0% | |
| !!! | GCTGTTTTGGAGTGAGAATG+AGG | - | chr7_1:49192637-49192656 | None:intergenic | 45.0% |
| TCTCAATCACGGCCAATTTC+TGG | + | chr7_1:49192685-49192704 | Msa1022610:intron | 45.0% | |
| !! | GAAAGAGATGAAGAGGCATC+AGG | - | chr7_1:49192954-49192973 | None:intergenic | 45.0% |
| AAGAACGGAAAGGTCAGAGA+AGG | + | chr7_1:49193417-49193436 | Msa1022610:intron | 45.0% | |
| AGAACGGAAAGGTCAGAGAA+GGG | + | chr7_1:49193418-49193437 | Msa1022610:intron | 45.0% | |
| ! | ATGAGGGCATATCAAGTGAG+AGG | - | chr7_1:49193546-49193565 | None:intergenic | 45.0% |
| ATGGTATCTGCATAAACCCG+CGG | + | chr7_1:49193766-49193785 | Msa1022610:intron | 45.0% | |
| TGCAAGAGTGATGTCTTGAC+AGG | - | chr7_1:49194384-49194403 | None:intergenic | 45.0% | |
| GTCAGGTGTTCATCTTGGTT+AGG | - | chr7_1:49194957-49194976 | None:intergenic | 45.0% | |
| TCATGGTCAGGTGTTCATCT+TGG | - | chr7_1:49194962-49194981 | None:intergenic | 45.0% | |
| GTTGTTGGCAAATCATGGTC+AGG | - | chr7_1:49194974-49194993 | None:intergenic | 45.0% | |
| ! | ACCCCATCTTTTTGTGTGGA+AGG | - | chr7_1:49195043-49195062 | None:intergenic | 45.0% |
| ! | ACTATGGACTGTGTGTTTGG+AGG | + | chr7_1:49195638-49195657 | Msa1022610:intron | 45.0% |
| GAAGGGGTTGAAACTGTAGA+TGG | + | chr7_1:49195930-49195949 | Msa1022610:CDS | 45.0% | |
| TCAAACACCTATGGGTCGTA+TGG | + | chr7_1:49195962-49195981 | Msa1022610:CDS | 45.0% | |
| CAAACACCTATGGGTCGTAT+GGG | + | chr7_1:49195963-49195982 | Msa1022610:CDS | 45.0% | |
| TGCAGCAGGAAGACAAAGAA+AGG | - | chr7_1:49196018-49196037 | None:intergenic | 45.0% | |
| !! | AATTATTTACATAAAAAAAA+GGG | - | chr7_1:49189798-49189817 | None:intergenic | 5.0% |
| !!! | ATTTTTAAGTAATTAAATTT+TGG | - | chr7_1:49190826-49190845 | None:intergenic | 5.0% |
| !! | AAATTTAATTACTTAAAAAT+TGG | + | chr7_1:49190826-49190845 | Msa1022610:intron | 5.0% |
| !! | AATAATGTTAAATATTTATT+TGG | + | chr7_1:49191862-49191881 | Msa1022610:intron | 5.0% |
| !!! | CTTTATTTTTATTAAATATA+AGG | + | chr7_1:49193594-49193613 | Msa1022610:intron | 5.0% |
| TTAGTAACAGGTGGAACCCG+AGG | + | chr7_1:49189642-49189661 | Msa1022610:CDS | 50.0% | |
| !! | CAAGAGAGTGCCGTGAATGT+TGG | + | chr7_1:49190942-49190961 | Msa1022610:intron | 50.0% |
| TCCGTGGATAAAATCCCCCA+TGG | + | chr7_1:49191941-49191960 | Msa1022610:intron | 50.0% | |
| ACGCTTCTTCTTCCTCTTCG+CGG | + | chr7_1:49192595-49192614 | Msa1022610:intron | 50.0% | |
| GAGAATGAGGAAGCAGAGGA+GGG | - | chr7_1:49192624-49192643 | None:intergenic | 50.0% | |
| TGAGAATGAGGAAGCAGAGG+AGG | - | chr7_1:49192625-49192644 | None:intergenic | 50.0% | |
| GAGTGAGAATGAGGAAGCAG+AGG | - | chr7_1:49192628-49192647 | None:intergenic | 50.0% | |
| ! | ATAGCAGGAGCACAACTAGC+AGG | - | chr7_1:49193197-49193216 | None:intergenic | 50.0% |
| GAACGGAAAGGTCAGAGAAG+GGG | + | chr7_1:49193419-49193438 | Msa1022610:intron | 50.0% | |
| AACGGAAAGGTCAGAGAAGG+GGG | + | chr7_1:49193420-49193439 | Msa1022610:intron | 50.0% | |
| GCGGGTTTATGCAGATACCA+TGG | - | chr7_1:49193767-49193786 | None:intergenic | 50.0% | |
| AACGGATATCCGCGCAGATA+TGG | + | chr7_1:49193818-49193837 | Msa1022610:intron | 50.0% | |
| AGTGATGTCTTGACAGGTCC+AGG | - | chr7_1:49194378-49194397 | None:intergenic | 50.0% | |
| TCCTGAAGTCCTAGCTCAAC+TGG | + | chr7_1:49195468-49195487 | Msa1022610:intron | 50.0% | |
| CCTGAAGTCCTAGCTCAACT+GGG | + | chr7_1:49195469-49195488 | Msa1022610:intron | 50.0% | |
| ! | GGCATTTTCCCAGTTGAGCT+AGG | - | chr7_1:49195480-49195499 | None:intergenic | 50.0% |
| ! | GGCATCCGGCCTAACAATTT+TGG | - | chr7_1:49195501-49195520 | None:intergenic | 50.0% |
| ! | ACACACACAAGTGGAGGTAC+CGG | - | chr7_1:49195542-49195561 | None:intergenic | 50.0% |
| CCAGTGATGTATGATGCAGC+AGG | - | chr7_1:49196032-49196051 | None:intergenic | 50.0% | |
| CCTGCTGCATCATACATCAC+TGG | + | chr7_1:49196029-49196048 | Msa1022610:CDS | 50.0% | |
| ! | CATTGTTGGTTGGACCTCCA+TGG | + | chr7_1:49196200-49196219 | Msa1022610:three_prime_UTR | 50.0% |
| GAAAGGTCAGAGAAGGGGGA+GGG | + | chr7_1:49193424-49193443 | Msa1022610:intron | 55.0% | |
| AAAGGTCAGAGAAGGGGGAG+GGG | + | chr7_1:49193425-49193444 | Msa1022610:intron | 55.0% | |
| CTGCGCGGATATCCGTTTAG+CGG | - | chr7_1:49193815-49193834 | None:intergenic | 55.0% | |
| CCCAGTTGAGCTAGGACTTC+AGG | - | chr7_1:49195472-49195491 | None:intergenic | 55.0% | |
| !! | ACACACAAGTGGAGGTACCG+GGG | - | chr7_1:49195540-49195559 | None:intergenic | 55.0% |
| !! | CACACACAAGTGGAGGTACC+GGG | - | chr7_1:49195541-49195560 | None:intergenic | 55.0% |
| ACAGGTGGAACCCGAGGCAT+TGG | + | chr7_1:49189648-49189667 | Msa1022610:CDS | 60.0% | |
| ! | CAGGTGGAACCCGAGGCATT+GGG | + | chr7_1:49189649-49189668 | Msa1022610:CDS | 60.0% |
| TTCGCACCCGTGGATATCCG+TGG | + | chr7_1:49191925-49191944 | Msa1022610:intron | 60.0% | |
| GGAAAGGTCAGAGAAGGGGG+AGG | + | chr7_1:49193423-49193442 | Msa1022610:intron | 60.0% | |
| CGTGCAAATGCTGTGGCACC+TGG | + | chr7_1:49194357-49194376 | Msa1022610:CDS | 60.0% | |
| GTTAGGCCGGATGCCATGAC+CGG | + | chr7_1:49195506-49195525 | Msa1022610:intron | 60.0% | |
| TTAGGCCGGATGCCATGACC+GGG | + | chr7_1:49195507-49195526 | Msa1022610:intron | 60.0% | |
| GGCTCTCCCATACGACCCAT+AGG | - | chr7_1:49195972-49195991 | None:intergenic | 60.0% | |
| AGAGGAGGGATGCCGCGAAG+AGG | - | chr7_1:49192610-49192629 | None:intergenic | 65.0% | |
| TAGGCCGGATGCCATGACCG+GGG | + | chr7_1:49195508-49195527 | Msa1022610:intron | 65.0% | |
| CGAACCCCGGTCATGGCATC+CGG | - | chr7_1:49195515-49195534 | None:intergenic | 65.0% | |
| CATGACCGGGGTTCGAACCC+CGG | + | chr7_1:49195520-49195539 | Msa1022610:intron | 65.0% | |
| !! | AGGTACCGGGGTTCGAACCC+CGG | - | chr7_1:49195528-49195547 | None:intergenic | 65.0% |
| CGGGGTTCGAACCCCGGTCA+TGG | - | chr7_1:49195522-49195541 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 49189497 | 49196280 | 49189497 | ID=Msa1022610;Name=Msa1022610 |
| chr7_1 | mRNA | 49189497 | 49196280 | 49189497 | ID=Msa1022610-mRNA-1;Parent=Msa1022610;Name=Msa1022610-mRNA-1;_AED=0.11;_eAED=0.11;_QI=82|1|1|1|1|1|5|192|265 |
| chr7_1 | exon | 49189497 | 49189670 | 49189497 | ID=Msa1022610-mRNA-1:exon:9609;Parent=Msa1022610-mRNA-1 |
| chr7_1 | exon | 49190193 | 49190400 | 49190193 | ID=Msa1022610-mRNA-1:exon:9610;Parent=Msa1022610-mRNA-1 |
| chr7_1 | exon | 49190482 | 49190698 | 49190482 | ID=Msa1022610-mRNA-1:exon:9611;Parent=Msa1022610-mRNA-1 |
| chr7_1 | exon | 49194301 | 49194413 | 49194301 | ID=Msa1022610-mRNA-1:exon:9612;Parent=Msa1022610-mRNA-1 |
| chr7_1 | exon | 49195921 | 49196280 | 49195921 | ID=Msa1022610-mRNA-1:exon:9613;Parent=Msa1022610-mRNA-1 |
| chr7_1 | five_prime_UTR | 49189497 | 49189578 | 49189497 | ID=Msa1022610-mRNA-1:five_prime_utr;Parent=Msa1022610-mRNA-1 |
| chr7_1 | CDS | 49189579 | 49189670 | 49189579 | ID=Msa1022610-mRNA-1:cds;Parent=Msa1022610-mRNA-1 |
| chr7_1 | CDS | 49190193 | 49190400 | 49190193 | ID=Msa1022610-mRNA-1:cds;Parent=Msa1022610-mRNA-1 |
| chr7_1 | CDS | 49190482 | 49190698 | 49190482 | ID=Msa1022610-mRNA-1:cds;Parent=Msa1022610-mRNA-1 |
| chr7_1 | CDS | 49194301 | 49194413 | 49194301 | ID=Msa1022610-mRNA-1:cds;Parent=Msa1022610-mRNA-1 |
| chr7_1 | CDS | 49195921 | 49196088 | 49195921 | ID=Msa1022610-mRNA-1:cds;Parent=Msa1022610-mRNA-1 |
| chr7_1 | three_prime_UTR | 49196089 | 49196280 | 49196089 | ID=Msa1022610-mRNA-1:three_prime_utr;Parent=Msa1022610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
