Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107370 | XP_003623204.1 | 97.285 | 221 | 6 | 0 | 1 | 221 | 1 | 221 | 5.71e-155 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107370 | sp|P32110|GSTX6_SOYBN | 66.816 | 223 | 69 | 2 | 1 | 218 | 1 | 223 | 1.60e-99 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107370 | G7L6H8 | 97.285 | 221 | 6 | 0 | 1 | 221 | 1 | 221 | 2.73e-155 | 438 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011930 | Msa1107370 | 0.802679 | 5.003987e-49 | -8.615850e-47 |
| Msa1107370 | Msa1188560 | 0.800455 | 1.429478e-48 | -8.615850e-47 |
| Msa1107370 | Msa1418240 | 0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0485240 | Msa1107370 | 0.800505 | 1.396912e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107370 | MtrunA17_Chr7g0240651 | 97.285 | 221 | 6 | 0 | 1 | 221 | 1 | 221 | 5.25e-159 | 438 |
| Msa1107370 | MtrunA17_Chr7g0240611 | 85.068 | 221 | 33 | 0 | 1 | 221 | 1 | 221 | 4.69e-137 | 383 |
| Msa1107370 | MtrunA17_Chr7g0240671 | 82.381 | 210 | 34 | 1 | 1 | 210 | 1 | 207 | 2.93e-127 | 358 |
| Msa1107370 | MtrunA17_Chr7g0240661 | 87.619 | 210 | 26 | 0 | 1 | 210 | 1 | 210 | 3.72e-126 | 355 |
| Msa1107370 | MtrunA17_Chr7g0240561 | 65.315 | 222 | 73 | 1 | 1 | 218 | 1 | 222 | 6.14e-103 | 296 |
| Msa1107370 | MtrunA17_Chr7g0240641 | 65.333 | 225 | 74 | 1 | 1 | 221 | 1 | 225 | 4.19e-100 | 290 |
| Msa1107370 | MtrunA17_Chr7g0240581 | 64.865 | 222 | 74 | 1 | 1 | 218 | 1 | 222 | 3.15e-98 | 285 |
| Msa1107370 | MtrunA17_Chr7g0240511 | 67.431 | 218 | 70 | 1 | 1 | 218 | 1 | 217 | 4.80e-98 | 284 |
| Msa1107370 | MtrunA17_Chr7g0240631 | 64.889 | 225 | 75 | 1 | 1 | 221 | 1 | 225 | 4.94e-98 | 284 |
| Msa1107370 | MtrunA17_Chr7g0240681 | 64.706 | 221 | 73 | 2 | 1 | 216 | 1 | 221 | 4.34e-96 | 279 |
| Msa1107370 | MtrunA17_Chr7g0240551 | 62.100 | 219 | 79 | 1 | 1 | 215 | 1 | 219 | 7.45e-93 | 271 |
| Msa1107370 | MtrunA17_Chr7g0240531 | 63.426 | 216 | 75 | 1 | 1 | 212 | 1 | 216 | 3.84e-92 | 269 |
| Msa1107370 | MtrunA17_Chr7g0240691 | 61.086 | 221 | 81 | 2 | 6 | 221 | 36 | 256 | 2.99e-91 | 268 |
| Msa1107370 | MtrunA17_Chr7g0240541 | 60.648 | 216 | 81 | 1 | 1 | 212 | 1 | 216 | 1.12e-88 | 260 |
| Msa1107370 | MtrunA17_Chr4g0008791 | 56.889 | 225 | 93 | 1 | 1 | 221 | 1 | 225 | 1.88e-85 | 252 |
| Msa1107370 | MtrunA17_Chr7g0240521 | 61.435 | 223 | 81 | 2 | 1 | 218 | 8 | 230 | 5.84e-83 | 246 |
| Msa1107370 | MtrunA17_Chr4g0008781 | 56.881 | 218 | 88 | 3 | 2 | 214 | 3 | 219 | 7.76e-82 | 243 |
| Msa1107370 | MtrunA17_Chr6g0483141 | 46.154 | 208 | 106 | 3 | 7 | 209 | 3 | 209 | 1.46e-59 | 186 |
| Msa1107370 | MtrunA17_Chr3g0132581 | 47.059 | 221 | 111 | 3 | 5 | 220 | 3 | 222 | 1.80e-57 | 181 |
| Msa1107370 | MtrunA17_Chr8g0379561 | 40.724 | 221 | 125 | 3 | 6 | 221 | 5 | 224 | 5.85e-56 | 177 |
| Msa1107370 | MtrunA17_Chr8g0379581 | 43.868 | 212 | 113 | 3 | 6 | 212 | 4 | 214 | 7.83e-53 | 169 |
| Msa1107370 | MtrunA17_Chr1g0196771 | 43.458 | 214 | 112 | 4 | 6 | 212 | 2 | 213 | 3.48e-52 | 168 |
| Msa1107370 | MtrunA17_Chr5g0417011 | 40.991 | 222 | 119 | 4 | 1 | 211 | 1 | 221 | 1.25e-51 | 166 |
| Msa1107370 | MtrunA17_Chr1g0196691 | 41.892 | 222 | 120 | 4 | 7 | 220 | 28 | 248 | 2.20e-51 | 166 |
| Msa1107370 | MtrunA17_Chr1g0196661 | 41.981 | 212 | 111 | 4 | 7 | 209 | 3 | 211 | 5.51e-50 | 162 |
| Msa1107370 | MtrunA17_Chr1g0212301 | 44.608 | 204 | 102 | 4 | 7 | 201 | 3 | 204 | 2.16e-49 | 160 |
| Msa1107370 | MtrunA17_Chr1g0196721 | 42.180 | 211 | 112 | 4 | 8 | 210 | 3 | 211 | 8.90e-47 | 154 |
| Msa1107370 | MtrunA17_Chr4g0029341 | 38.967 | 213 | 120 | 4 | 6 | 210 | 3 | 213 | 2.38e-46 | 152 |
| Msa1107370 | MtrunA17_Chr5g0415411 | 39.640 | 222 | 122 | 3 | 7 | 216 | 5 | 226 | 3.00e-45 | 150 |
| Msa1107370 | MtrunA17_Chr2g0312771 | 39.336 | 211 | 119 | 5 | 4 | 208 | 1 | 208 | 1.02e-44 | 148 |
| Msa1107370 | MtrunA17_Chr2g0312731 | 42.029 | 207 | 111 | 6 | 4 | 204 | 1 | 204 | 1.85e-44 | 148 |
| Msa1107370 | MtrunA17_Chr2g0312751 | 39.151 | 212 | 120 | 5 | 4 | 209 | 1 | 209 | 1.93e-44 | 148 |
| Msa1107370 | MtrunA17_Chr1g0196711 | 39.524 | 210 | 117 | 4 | 7 | 208 | 3 | 210 | 3.31e-44 | 147 |
| Msa1107370 | MtrunA17_Chr2g0312811 | 37.383 | 214 | 123 | 6 | 6 | 211 | 3 | 213 | 2.54e-41 | 140 |
| Msa1107370 | MtrunA17_Chr3g0107731 | 40.385 | 208 | 119 | 5 | 5 | 208 | 7 | 213 | 2.70e-41 | 140 |
| Msa1107370 | MtrunA17_Chr4g0069471 | 48.503 | 167 | 80 | 5 | 3 | 166 | 21 | 184 | 3.61e-41 | 139 |
| Msa1107370 | MtrunA17_Chr2g0312791 | 38.009 | 221 | 128 | 6 | 4 | 217 | 1 | 219 | 1.57e-40 | 138 |
| Msa1107370 | MtrunA17_Chr8g0357241 | 47.239 | 163 | 81 | 4 | 6 | 166 | 3 | 162 | 5.03e-40 | 136 |
| Msa1107370 | MtrunA17_Chr8g0357211 | 47.239 | 163 | 81 | 4 | 6 | 166 | 3 | 162 | 5.13e-40 | 136 |
| Msa1107370 | MtrunA17_Chr8g0363751 | 38.571 | 210 | 117 | 4 | 7 | 204 | 5 | 214 | 1.24e-39 | 136 |
| Msa1107370 | MtrunA17_Chr2g0312781 | 36.667 | 210 | 124 | 5 | 1 | 204 | 15 | 221 | 2.65e-39 | 135 |
| Msa1107370 | MtrunA17_Chr3g0107741 | 37.619 | 210 | 122 | 5 | 5 | 208 | 7 | 213 | 2.07e-38 | 132 |
| Msa1107370 | MtrunA17_Chr2g0312721 | 36.098 | 205 | 126 | 4 | 4 | 204 | 1 | 204 | 6.11e-38 | 131 |
| Msa1107370 | MtrunA17_Chr2g0312691 | 35.455 | 220 | 133 | 5 | 4 | 217 | 1 | 217 | 1.61e-37 | 130 |
| Msa1107370 | MtrunA17_Chr2g0312681 | 35.071 | 211 | 128 | 5 | 4 | 208 | 1 | 208 | 9.17e-37 | 128 |
| Msa1107370 | MtrunA17_Chr5g0433801 | 38.164 | 207 | 123 | 4 | 6 | 208 | 5 | 210 | 1.19e-35 | 125 |
| Msa1107370 | MtrunA17_Chr2g0312711 | 36.967 | 211 | 123 | 6 | 4 | 208 | 1 | 207 | 9.23e-34 | 120 |
| Msa1107370 | MtrunA17_Chr8g0391631 | 43.590 | 156 | 78 | 4 | 7 | 153 | 21 | 175 | 1.44e-31 | 113 |
| Msa1107370 | MtrunA17_Chr2g0313561 | 39.130 | 69 | 40 | 2 | 51 | 118 | 2 | 69 | 4.74e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1107370 | AT3G09270.1 | 51.584 | 221 | 99 | 5 | 5 | 218 | 4 | 223 | 5.88e-69 | 211 |
| Msa1107370 | AT2G29420.1 | 45.000 | 220 | 115 | 3 | 6 | 220 | 8 | 226 | 4.28e-64 | 199 |
| Msa1107370 | AT2G29450.1 | 44.595 | 222 | 114 | 4 | 3 | 215 | 2 | 223 | 2.56e-54 | 174 |
| Msa1107370 | AT2G29480.1 | 46.256 | 227 | 106 | 6 | 1 | 215 | 1 | 223 | 2.78e-54 | 173 |
| Msa1107370 | AT2G29490.1 | 44.196 | 224 | 118 | 4 | 1 | 218 | 1 | 223 | 5.59e-54 | 172 |
| Msa1107370 | AT2G29460.1 | 45.833 | 216 | 110 | 4 | 1 | 210 | 1 | 215 | 6.95e-54 | 172 |
| Msa1107370 | AT2G29470.1 | 41.778 | 225 | 123 | 5 | 1 | 218 | 1 | 224 | 2.96e-52 | 168 |
| Msa1107370 | AT2G29440.1 | 41.096 | 219 | 122 | 4 | 6 | 218 | 5 | 222 | 1.64e-48 | 159 |
| Msa1107370 | AT1G10370.1 | 40.580 | 207 | 112 | 3 | 5 | 200 | 3 | 209 | 6.08e-46 | 152 |
| Msa1107370 | AT1G59700.1 | 43.723 | 231 | 115 | 7 | 5 | 220 | 4 | 234 | 7.32e-46 | 152 |
| Msa1107370 | AT1G59670.1 | 41.256 | 223 | 116 | 6 | 6 | 213 | 5 | 227 | 7.52e-46 | 152 |
| Msa1107370 | AT1G27140.1 | 38.667 | 225 | 121 | 5 | 3 | 212 | 2 | 224 | 5.44e-44 | 148 |
| Msa1107370 | AT1G78340.1 | 47.647 | 170 | 86 | 3 | 4 | 171 | 1 | 169 | 3.15e-43 | 145 |
| Msa1107370 | AT1G69930.1 | 38.073 | 218 | 123 | 5 | 5 | 210 | 10 | 227 | 3.67e-43 | 145 |
| Msa1107370 | AT1G10360.1 | 38.350 | 206 | 116 | 4 | 6 | 200 | 4 | 209 | 9.81e-43 | 144 |
| Msa1107370 | AT1G78320.1 | 38.605 | 215 | 123 | 5 | 4 | 212 | 1 | 212 | 1.54e-42 | 143 |
| Msa1107370 | AT1G27130.1 | 37.838 | 222 | 126 | 5 | 3 | 212 | 2 | 223 | 3.70e-42 | 142 |
| Msa1107370 | AT1G78370.1 | 40.394 | 203 | 116 | 5 | 10 | 208 | 7 | 208 | 5.53e-42 | 142 |
| Msa1107370 | AT1G17170.1 | 38.889 | 216 | 126 | 5 | 6 | 217 | 3 | 216 | 2.60e-41 | 140 |
| Msa1107370 | AT1G78380.1 | 40.196 | 204 | 113 | 5 | 7 | 204 | 4 | 204 | 1.73e-40 | 138 |
| Msa1107370 | AT1G17180.1 | 39.901 | 203 | 117 | 5 | 6 | 204 | 3 | 204 | 5.91e-40 | 137 |
| Msa1107370 | AT1G53680.1 | 36.493 | 211 | 129 | 5 | 1 | 206 | 1 | 211 | 5.51e-38 | 132 |
| Msa1107370 | AT5G62480.1 | 39.070 | 215 | 116 | 6 | 4 | 204 | 5 | 218 | 2.91e-37 | 130 |
| Msa1107370 | AT1G78360.1 | 39.070 | 215 | 118 | 7 | 1 | 208 | 1 | 209 | 3.36e-37 | 129 |
| Msa1107370 | AT1G69920.1 | 38.350 | 206 | 115 | 5 | 8 | 201 | 35 | 240 | 3.53e-37 | 130 |
| Msa1107370 | AT3G43800.1 | 38.537 | 205 | 117 | 7 | 5 | 201 | 3 | 206 | 1.78e-35 | 125 |
| Msa1107370 | AT1G17190.1 | 38.378 | 185 | 109 | 5 | 6 | 186 | 4 | 187 | 2.03e-35 | 125 |
| Msa1107370 | AT1G74590.1 | 35.961 | 203 | 117 | 5 | 7 | 198 | 7 | 207 | 4.87e-31 | 114 |
| Msa1107370 | AT1G78320.2 | 32.524 | 206 | 105 | 5 | 4 | 204 | 1 | 177 | 2.70e-26 | 100 |
| Msa1107370 | AT5G62480.3 | 31.308 | 214 | 107 | 6 | 4 | 204 | 5 | 191 | 2.72e-20 | 85.5 |
| Msa1107370 | AT5G62480.2 | 31.308 | 214 | 108 | 6 | 4 | 204 | 5 | 192 | 2.86e-20 | 85.5 |
Find 46 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGGATCATTAGGCAAAAT+AGG | 0.209722 | 7_3:-48906216 | None:intergenic |
| ACTTGACTGTGTTGAGTTAT+TGG | 0.217485 | 7_3:+48911959 | Msa1107370:three_prime_UTR |
| TCAAATATAATCCAGTTTAT+AGG | 0.238084 | 7_3:+48906106 | Msa1107370:CDS |
| ACTGTTTCTCTGCTACTTCT+TGG | 0.238294 | 7_3:-48908223 | None:intergenic |
| GAAAATGACAACAATCTTTC+TGG | 0.250775 | 7_3:-48912042 | None:intergenic |
| CCTTCAAAGGAACAACAATT+TGG | 0.250973 | 7_3:+48908326 | Msa1107370:CDS |
| GTTCCTGTTCTTGTTCATAA+TGG | 0.264740 | 7_3:+48906132 | Msa1107370:CDS |
| GAGCTGAAGGACAAGTTCTT+TGG | 0.294063 | 7_3:+48908149 | Msa1107370:CDS |
| AAAGAGCCTTGGATCGGTTT+TGG | 0.294414 | 7_3:+48906241 | Msa1107370:CDS |
| TGTTGGTATGTTTATGTCTA+AGG | 0.297402 | 7_3:-48905886 | None:intergenic |
| TGAAGAAGAAGTTCAGCTTT+TGG | 0.327762 | 7_3:+48905975 | Msa1107370:CDS |
| CCAAATTGTTGTTCCTTTGA+AGG | 0.337895 | 7_3:-48908326 | None:intergenic |
| TTCCTGTTCTTGTTCATAAT+GGG | 0.343118 | 7_3:+48906133 | Msa1107370:CDS |
| ATCACACGTGACTCTGAAAT+AGG | 0.363430 | 7_3:-48906159 | None:intergenic |
| ACAGGAACCATCCTATAAAC+TGG | 0.382808 | 7_3:-48906117 | None:intergenic |
| GTCTAAGTTCATTGATGAAA+AGG | 0.390158 | 7_3:+48906263 | Msa1107370:CDS |
| TTCTCGCGCTCTTTCTCATC+AGG | 0.391480 | 7_3:-48908083 | None:intergenic |
| GGGAAGTCCATTTGTGATAA+GGG | 0.397256 | 7_3:+48906005 | Msa1107370:CDS |
| ATTTGAACCCTTATCACAAA+TGG | 0.404722 | 7_3:-48906012 | None:intergenic |
| TGTTTGAATTTCAGTTCAAA+TGG | 0.414114 | 7_3:+48911983 | Msa1107370:three_prime_UTR |
| TGGGAAGTCCATTTGTGATA+AGG | 0.415245 | 7_3:+48906004 | Msa1107370:CDS |
| TTCTTTGGAGGACAAGAGAT+TGG | 0.418946 | 7_3:+48908164 | Msa1107370:CDS |
| TTGAGTATATTGATGAAGCT+TGG | 0.430723 | 7_3:+48906184 | Msa1107370:CDS |
| AGCTTGGGAAATTTGTCAGC+AGG | 0.453112 | 7_3:-48908251 | None:intergenic |
| TTCCCATTATGAACAAGAAC+AGG | 0.453502 | 7_3:-48906135 | None:intergenic |
| AGGACAAGAGATTGGCTTTG+TGG | 0.456715 | 7_3:+48908172 | Msa1107370:CDS |
| CTGCTACTTCTTGGAACAAA+GGG | 0.461591 | 7_3:-48908214 | None:intergenic |
| CAAATTGCTCTGAAATTGAA+AGG | 0.499164 | 7_3:+48906030 | Msa1107370:CDS |
| GGCTCGTGAAGAACTATTCG+AGG | 0.504369 | 7_3:+48908106 | Msa1107370:CDS |
| GGCATAACTTCTTTGACGAC+TGG | 0.505487 | 7_3:-48908305 | None:intergenic |
| CTGAAGGACAAGTTCTTTGG+AGG | 0.513642 | 7_3:+48908152 | Msa1107370:CDS |
| CAAAGAAGTTATGCCTTCAA+AGG | 0.523092 | 7_3:+48908313 | Msa1107370:CDS |
| TGATCCTTACAAAAGAGCCT+TGG | 0.527046 | 7_3:+48906230 | Msa1107370:CDS |
| TAACTTCTTTGACGACTGGA+TGG | 0.546537 | 7_3:-48908301 | None:intergenic |
| TCTGCTACTTCTTGGAACAA+AGG | 0.549415 | 7_3:-48908215 | None:intergenic |
| AGTAATTTGTGTAACTGTGT+TGG | 0.551805 | 7_3:-48905903 | None:intergenic |
| TGATTTCTTATTTGTCACAA+AGG | 0.551865 | 7_3:+48912018 | Msa1107370:three_prime_UTR |
| AGGAATTGAACACAAATATG+TGG | 0.552045 | 7_3:+48906050 | Msa1107370:CDS |
| GAGAAATTGAAGCACTACAA+TGG | 0.578481 | 7_3:+48905945 | Msa1107370:exon |
| GTTTCTTGAGAATGAGCTGA+AGG | 0.580852 | 7_3:+48908136 | Msa1107370:CDS |
| CTTACAAAAGAGCCTTGGAT+CGG | 0.586658 | 7_3:+48906235 | Msa1107370:CDS |
| GCTTGGGAAATTTGTCAGCA+GGG | 0.597981 | 7_3:-48908250 | None:intergenic |
| ATATAATCCAGTTTATAGGA+TGG | 0.598989 | 7_3:+48906110 | Msa1107370:CDS |
| TGATGAGAAAGAGCGCGAGA+AGG | 0.601244 | 7_3:+48908085 | Msa1107370:CDS |
| ATCAGTGTACGATTGCTGCA+TGG | 0.617894 | 7_3:+48908045 | Msa1107370:intron |
| CTTAGACCAAAACCGATCCA+AGG | 0.641905 | 7_3:-48906247 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTATTATTACTTTTTAT+AGG | - | chr7_3:48905864-48905883 | None:intergenic | 10.0% |
| !! | ATAACTAATAATCTATAAAT+TGG | - | chr7_3:48906294-48906313 | None:intergenic | 10.0% |
| !!! | ATTATATTATTCTATTTTGA+CGG | - | chr7_3:48908386-48908405 | None:intergenic | 10.0% |
| !!! | TTTGATTTATAAGAATATTT+GGG | + | chr7_3:48911200-48911219 | Msa1107370:intron | 10.0% |
| !!! | TGTCTATCATTAAAAATTTT+GGG | + | chr7_3:48906794-48906813 | Msa1107370:intron | 15.0% |
| !! | TAATTCATAACAGAAATAAA+CGG | + | chr7_3:48907076-48907095 | Msa1107370:intron | 15.0% |
| !! | AAAAGATGATAAACAAAAAT+AGG | - | chr7_3:48909384-48909403 | None:intergenic | 15.0% |
| !! | TATTTCACTAGTAAAAATTA+AGG | - | chr7_3:48909545-48909564 | None:intergenic | 15.0% |
| !!! | TTGATTTGAATTTTTTTTTC+TGG | - | chr7_3:48909723-48909742 | None:intergenic | 15.0% |
| !!! | ATTTAATTTTTACTACTAGT+AGG | - | chr7_3:48909856-48909875 | None:intergenic | 15.0% |
| !! | AAATATGTTGAAGAAAAATT+GGG | + | chr7_3:48910188-48910207 | Msa1107370:intron | 15.0% |
| !! | ATAGGTTATAATATAAGAAA+TGG | - | chr7_3:48910418-48910437 | None:intergenic | 15.0% |
| !! | TTCAAATTTAAAAAACAACT+TGG | + | chr7_3:48911133-48911152 | Msa1107370:intron | 15.0% |
| !!! | GTTTGATTTATAAGAATATT+TGG | + | chr7_3:48911199-48911218 | Msa1107370:intron | 15.0% |
| !! | TCAAATATAATCCAGTTTAT+AGG | + | chr7_3:48906106-48906125 | Msa1107370:CDS | 20.0% |
| !!! | TTAAGTTTAAAATTGTGCAT+TGG | - | chr7_3:48906399-48906418 | None:intergenic | 20.0% |
| !! | ATAGTGCAAATATTCTAAAT+AGG | + | chr7_3:48906561-48906580 | Msa1107370:intron | 20.0% |
| !!! | GTGTCTATCATTAAAAATTT+TGG | + | chr7_3:48906793-48906812 | Msa1107370:intron | 20.0% |
| !!! | TTTCTTTTATACTTCTATAC+TGG | + | chr7_3:48907187-48907206 | Msa1107370:intron | 20.0% |
| !! | TCATAACTAAATTTGATCAA+TGG | - | chr7_3:48907253-48907272 | None:intergenic | 20.0% |
| !!! | AATGTTATGTTCAGATTTTA+AGG | + | chr7_3:48907282-48907301 | Msa1107370:intron | 20.0% |
| !! | AAAAATGAAATACAAAACAC+AGG | - | chr7_3:48907549-48907568 | None:intergenic | 20.0% |
| !!! | TTGCTATTTCAATTAATGAA+AGG | + | chr7_3:48908550-48908569 | Msa1107370:intron | 20.0% |
| !! | AATATCTTCTTGTGTAAAAT+TGG | + | chr7_3:48909021-48909040 | Msa1107370:intron | 20.0% |
| !! | TAATATTAGTATTGCTAACT+AGG | - | chr7_3:48909509-48909528 | None:intergenic | 20.0% |
| !! | AGTTAGCAATACTAATATTA+TGG | + | chr7_3:48909509-48909528 | Msa1107370:intron | 20.0% |
| !! | TTACTAGTGAAATAGTTAAA+TGG | + | chr7_3:48909551-48909570 | Msa1107370:intron | 20.0% |
| !! | ACATTTAAATGTTGAGAAAT+GGG | - | chr7_3:48909673-48909692 | None:intergenic | 20.0% |
| !!! | TATTTTCAATCTACTAATAC+AGG | + | chr7_3:48909751-48909770 | Msa1107370:intron | 20.0% |
| !! | CAAATATGTTGAAGAAAAAT+TGG | + | chr7_3:48910187-48910206 | Msa1107370:intron | 20.0% |
| !! | CAAATTAATGTTAGATAGAT+CGG | - | chr7_3:48910475-48910494 | None:intergenic | 20.0% |
| !! | TGTTTGAATTTCAATTCAAA+TGG | + | chr7_3:48910900-48910919 | Msa1107370:intron | 20.0% |
| !!! | CTAAAGAGAAAGTTTTATTT+TGG | + | chr7_3:48911106-48911125 | Msa1107370:intron | 20.0% |
| !! | AAAGTTTACATTTATTGACA+AGG | - | chr7_3:48911517-48911536 | None:intergenic | 20.0% |
| !!! | AAATGTAAACTTTGTTTATC+CGG | + | chr7_3:48911524-48911543 | Msa1107370:intron | 20.0% |
| !! | ACAAATAAAGTTAGATAGAT+AGG | - | chr7_3:48911559-48911578 | None:intergenic | 20.0% |
| ! | AAATATGTGGAAGAAAAACT+GGG | + | chr7_3:48906063-48906082 | Msa1107370:CDS | 25.0% |
| ! | ATATAATCCAGTTTATAGGA+TGG | + | chr7_3:48906110-48906129 | Msa1107370:CDS | 25.0% |
| ! | ACTAGTATACATCTCATAAA+AGG | - | chr7_3:48906319-48906338 | None:intergenic | 25.0% |
| ! | TCTAAATAGGTCAAGTAATA+TGG | + | chr7_3:48906574-48906593 | Msa1107370:intron | 25.0% |
| ! | CTAAATAGGTCAAGTAATAT+GGG | + | chr7_3:48906575-48906594 | Msa1107370:intron | 25.0% |
| ! | TCTGAACATAACATTTAAAG+TGG | - | chr7_3:48907277-48907296 | None:intergenic | 25.0% |
| !!! | TCTACTTTAGAATGAATGTT+TGG | + | chr7_3:48907474-48907493 | Msa1107370:intron | 25.0% |
| !!! | GTATTTCGAGTTATAGAAAT+GGG | - | chr7_3:48907628-48907647 | None:intergenic | 25.0% |
| !!! | TGTATTTCGAGTTATAGAAA+TGG | - | chr7_3:48907629-48907648 | None:intergenic | 25.0% |
| ! | ATCAGTAAGAAACAAATATG+TGG | - | chr7_3:48907707-48907726 | None:intergenic | 25.0% |
| !! | TTTGTTTCTTACTGATGTAA+TGG | + | chr7_3:48907711-48907730 | Msa1107370:intron | 25.0% |
| ! | CAAATTCATAGATAATCACA+TGG | - | chr7_3:48907887-48907906 | None:intergenic | 25.0% |
| ! | TGTTTGAATTTCAGTTCAAA+TGG | + | chr7_3:48908471-48908490 | Msa1107370:intron | 25.0% |
| !! | ATTTTACAAATGTCCAAGAA+GGG | - | chr7_3:48908669-48908688 | None:intergenic | 25.0% |
| ! | GCATAGGTCAATAATATTAT+GGG | - | chr7_3:48908822-48908841 | None:intergenic | 25.0% |
| ! | TGCATAGGTCAATAATATTA+TGG | - | chr7_3:48908823-48908842 | None:intergenic | 25.0% |
| ! | TAATATTATTGACCTATGCA+TGG | + | chr7_3:48908823-48908842 | Msa1107370:intron | 25.0% |
| !!! | ACAAATGATGGATTTAAGAT+AGG | + | chr7_3:48909149-48909168 | Msa1107370:intron | 25.0% |
| ! | AGAAAGAAGAGAAAGAAAAA+TGG | - | chr7_3:48909311-48909330 | None:intergenic | 25.0% |
| ! | TATTCACAGTTCATAAAAGA+GGG | - | chr7_3:48909348-48909367 | None:intergenic | 25.0% |
| ! | TTATTCACAGTTCATAAAAG+AGG | - | chr7_3:48909349-48909368 | None:intergenic | 25.0% |
| ! | CATTTAAATGTTGAGAAATG+GGG | - | chr7_3:48909672-48909691 | None:intergenic | 25.0% |
| ! | CACATTTAAATGTTGAGAAA+TGG | - | chr7_3:48909674-48909693 | None:intergenic | 25.0% |
| ! | GATGTAAGACGTTATAAATA+GGG | - | chr7_3:48910048-48910067 | None:intergenic | 25.0% |
| ! | TGATGTAAGACGTTATAAAT+AGG | - | chr7_3:48910049-48910068 | None:intergenic | 25.0% |
| !!! | TCAAATTGCTCTAAAATTGA+AGG | + | chr7_3:48910154-48910173 | Msa1107370:intron | 25.0% |
| !!! | CAAATTGCTCTAAAATTGAA+GGG | + | chr7_3:48910155-48910174 | Msa1107370:intron | 25.0% |
| ! | AAATTCAATTGCATTCGTAT+AGG | - | chr7_3:48910436-48910455 | None:intergenic | 25.0% |
| !! | GAATGCAATTGAATTTTGTT+CGG | + | chr7_3:48910440-48910459 | Msa1107370:intron | 25.0% |
| ! | ATCAAACCATATTCATTTAC+CGG | - | chr7_3:48911186-48911205 | None:intergenic | 25.0% |
| ! | TTTATAAGAATATTTGGGCA+TGG | + | chr7_3:48911205-48911224 | Msa1107370:intron | 25.0% |
| ! | ACATCTACTTATAATCTCAA+GGG | + | chr7_3:48911230-48911249 | Msa1107370:intron | 25.0% |
| !! | AACTTTATTTGTACAATCAG+TGG | + | chr7_3:48911567-48911586 | Msa1107370:intron | 25.0% |
| ! | ATCTTGAAATAAAGTGATGA+AGG | - | chr7_3:48910664-48910683 | None:intergenic | 25.0% |
| ! | TGTTTGAATTTCAGTTCAAA+TGG | + | chr7_3:48908471-48908490 | Msa1107370:intron | 25.0% |
| !! | TGATTTCTTATTTGTCACAA+AGG | + | chr7_3:48912018-48912037 | Msa1107370:three_prime_UTR | 25.0% |
| TGTTGGTATGTTTATGTCTA+AGG | - | chr7_3:48905889-48905908 | None:intergenic | 30.0% | |
| ! | AGTAATTTGTGTAACTGTGT+TGG | - | chr7_3:48905906-48905925 | None:intergenic | 30.0% |
| ATTTGAACCCTTATCACAAA+TGG | - | chr7_3:48906015-48906034 | None:intergenic | 30.0% | |
| !! | CAAATTGCTCTGAAATTGAA+AGG | + | chr7_3:48906030-48906049 | Msa1107370:CDS | 30.0% |
| AGGAATTGAACACAAATATG+TGG | + | chr7_3:48906050-48906069 | Msa1107370:CDS | 30.0% | |
| CAAATATGTGGAAGAAAAAC+TGG | + | chr7_3:48906062-48906081 | Msa1107370:CDS | 30.0% | |
| TTCCTGTTCTTGTTCATAAT+GGG | + | chr7_3:48906133-48906152 | Msa1107370:CDS | 30.0% | |
| TTGAGTATATTGATGAAGCT+TGG | + | chr7_3:48906184-48906203 | Msa1107370:CDS | 30.0% | |
| TAAGGATCATTAGGCAAAAT+AGG | - | chr7_3:48906219-48906238 | None:intergenic | 30.0% | |
| GTCTAAGTTCATTGATGAAA+AGG | + | chr7_3:48906263-48906282 | Msa1107370:CDS | 30.0% | |
| GACACATGACTATATGTAAT+TGG | - | chr7_3:48906778-48906797 | None:intergenic | 30.0% | |
| !!! | TTAGACCCAATTGTTTTTTC+AGG | + | chr7_3:48906951-48906970 | Msa1107370:intron | 30.0% |
| !!! | TAGACCCAATTGTTTTTTCA+GGG | + | chr7_3:48906952-48906971 | Msa1107370:intron | 30.0% |
| AGACGTAGTACTATCTATAT+TGG | + | chr7_3:48907035-48907054 | Msa1107370:intron | 30.0% | |
| AACCAAACATACAGTAGTAT+AGG | + | chr7_3:48907512-48907531 | Msa1107370:intron | 30.0% | |
| !! | TTGGTTTTTAAAAGATGCAG+TGG | + | chr7_3:48907589-48907608 | Msa1107370:intron | 30.0% |
| TTCTTACTGATGTAATGGTA+AGG | + | chr7_3:48907716-48907735 | Msa1107370:intron | 30.0% | |
| GATGTAATGGTAAGGTTATA+AGG | + | chr7_3:48907724-48907743 | Msa1107370:intron | 30.0% | |
| !! | TAATTCGTGTCGTTTGTTAT+GGG | - | chr7_3:48907770-48907789 | None:intergenic | 30.0% |
| AAAGTTCACATTTAGTGACA+TGG | - | chr7_3:48907983-48908002 | None:intergenic | 30.0% | |
| AATTTCCCAAGCTACAAAAA+TGG | + | chr7_3:48908261-48908280 | Msa1107370:CDS | 30.0% | |
| ! | CATTTTACAAATGTCCAAGA+AGG | - | chr7_3:48908670-48908689 | None:intergenic | 30.0% |
| AAAAAAACCCCAAATCCAAA+AGG | - | chr7_3:48908919-48908938 | None:intergenic | 30.0% | |
| ATTGAAGAGTTTGGATTCAT+TGG | - | chr7_3:48909004-48909023 | None:intergenic | 30.0% | |
| CAAGAAGATATTGAAGAGTT+TGG | - | chr7_3:48909013-48909032 | None:intergenic | 30.0% | |
| CCAAAGGAATTTCAAATCTT+CGG | + | chr7_3:48909101-48909120 | Msa1107370:intron | 30.0% | |
| ATTTCAAATCTTCGGTCTAT+TGG | + | chr7_3:48909109-48909128 | Msa1107370:intron | 30.0% | |
| AGAGAGAATGAAACAAATGA+TGG | + | chr7_3:48909137-48909156 | Msa1107370:intron | 30.0% | |
| !!! | TTCTCAACTTGGTTTTATGA+AGG | - | chr7_3:48909284-48909303 | None:intergenic | 30.0% |
| !! | TGAGTTTTAGTAGTGATTGT+TGG | - | chr7_3:48909442-48909461 | None:intergenic | 30.0% |
| GACAATGCATAATATATGCA+GGG | + | chr7_3:48909624-48909643 | Msa1107370:intron | 30.0% | |
| ACAATGCATAATATATGCAG+GGG | + | chr7_3:48909625-48909644 | Msa1107370:intron | 30.0% | |
| ! | TTCAATACTTTTGCAGAAAC+TGG | + | chr7_3:48909881-48909900 | Msa1107370:intron | 30.0% |
| TAAGACGTTATAAATAGGGA+CGG | - | chr7_3:48910044-48910063 | None:intergenic | 30.0% | |
| TACGAATTTAAGCTCAACAA+TGG | + | chr7_3:48910070-48910089 | Msa1107370:intron | 30.0% | |
| ATTTGAACCCTTATCACAAA+TGG | - | chr7_3:48906015-48906034 | None:intergenic | 30.0% | |
| TTCCTGTTCTTGTTCATAAT+GGG | + | chr7_3:48906133-48906152 | Msa1107370:CDS | 30.0% | |
| ACTTGATTGTGTTGAGTTAT+TGG | + | chr7_3:48910876-48910895 | Msa1107370:intron | 30.0% | |
| TGATTTCTCATTTGTCACAA+AGG | + | chr7_3:48910935-48910954 | Msa1107370:intron | 30.0% | |
| GAAAATGACAACAATCTTTC+GGG | - | chr7_3:48910962-48910981 | None:intergenic | 30.0% | |
| CGAAAATGACAACAATCTTT+CGG | - | chr7_3:48910963-48910982 | None:intergenic | 30.0% | |
| TTTGAATCATAAACAAGTGC+CGG | + | chr7_3:48911164-48911183 | Msa1107370:intron | 30.0% | |
| CACATCTACTTATAATCTCA+AGG | + | chr7_3:48911229-48911248 | Msa1107370:intron | 30.0% | |
| ! | ATTTTACAATTGTCTCGGAA+GGG | - | chr7_3:48911269-48911288 | None:intergenic | 30.0% |
| ! | CAACCATTTTACAATTGTCT+CGG | - | chr7_3:48911274-48911293 | None:intergenic | 30.0% |
| AATTGAATGTAAATGCGTGT+AGG | + | chr7_3:48911326-48911345 | Msa1107370:intron | 30.0% | |
| ACTACATATCATACATAGTG+AGG | + | chr7_3:48911393-48911412 | Msa1107370:intron | 30.0% | |
| ATCACAATGTCTAATTGTGA+GGG | - | chr7_3:48911422-48911441 | None:intergenic | 30.0% | |
| AATCACAATGTCTAATTGTG+AGG | - | chr7_3:48911423-48911442 | None:intergenic | 30.0% | |
| GATAGATAGGAAAATGAAAC+CGG | - | chr7_3:48911546-48911565 | None:intergenic | 30.0% | |
| TTATTTGTACAATCAGTGGA+TGG | + | chr7_3:48911571-48911590 | Msa1107370:intron | 30.0% | |
| GAAAATGACAACAATCTTTC+TGG | - | chr7_3:48910962-48910981 | None:intergenic | 30.0% | |
| ! | GAGAAATTGAAGCACTACAA+TGG | + | chr7_3:48905945-48905964 | Msa1107370:exon | 35.0% |
| ! | TGAAGAAGAAGTTCAGCTTT+TGG | + | chr7_3:48905975-48905994 | Msa1107370:CDS | 35.0% |
| ! | GAAGAAGAAGTTCAGCTTTT+GGG | + | chr7_3:48905976-48905995 | Msa1107370:CDS | 35.0% |
| GTTCCTGTTCTTGTTCATAA+TGG | + | chr7_3:48906132-48906151 | Msa1107370:CDS | 35.0% | |
| TTCCCATTATGAACAAGAAC+AGG | - | chr7_3:48906138-48906157 | None:intergenic | 35.0% | |
| ! | GCTCTTTTGTAAGGATCATT+AGG | - | chr7_3:48906228-48906247 | None:intergenic | 35.0% |
| CTAGGTCAAGTAATATGTGA+CGG | - | chr7_3:48906358-48906377 | None:intergenic | 35.0% | |
| ATAGGTCAAGTAATATGGGA+CGG | + | chr7_3:48906579-48906598 | Msa1107370:intron | 35.0% | |
| TGAAGTTGAACCAAACACAA+GGG | - | chr7_3:48906923-48906942 | None:intergenic | 35.0% | |
| TTGAAGTTGAACCAAACACA+AGG | - | chr7_3:48906924-48906943 | None:intergenic | 35.0% | |
| !!! | AGACCCAATTGTTTTTTCAG+GGG | + | chr7_3:48906953-48906972 | Msa1107370:intron | 35.0% |
| TCACCCCTGAAAAAACAATT+GGG | - | chr7_3:48906959-48906978 | None:intergenic | 35.0% | |
| CTCCTATACTACTGTATGTT+TGG | - | chr7_3:48907517-48907536 | None:intergenic | 35.0% | |
| AGAAAACAAGAGAAGATCCT+TGG | + | chr7_3:48907656-48907675 | Msa1107370:intron | 35.0% | |
| !! | CTAATTCGTGTCGTTTGTTA+TGG | - | chr7_3:48907771-48907790 | None:intergenic | 35.0% |
| ATGGTAGATGAATTCTAGCA+TGG | - | chr7_3:48907964-48907983 | None:intergenic | 35.0% | |
| !! | AGACTCCATTTTTGTAGCTT+GGG | - | chr7_3:48908269-48908288 | None:intergenic | 35.0% |
| !! | TAGACTCCATTTTTGTAGCT+TGG | - | chr7_3:48908270-48908289 | None:intergenic | 35.0% |
| CAAAGAAGTTATGCCTTCAA+AGG | + | chr7_3:48908313-48908332 | Msa1107370:CDS | 35.0% | |
| ! | CCAAATTGTTGTTCCTTTGA+AGG | - | chr7_3:48908329-48908348 | None:intergenic | 35.0% |
| CCTTCAAAGGAACAACAATT+TGG | + | chr7_3:48908326-48908345 | Msa1107370:CDS | 35.0% | |
| ACTAGACTTTGTTGAGTTCT+TGG | + | chr7_3:48908447-48908466 | Msa1107370:intron | 35.0% | |
| AAACATGACAACAATCTGTC+GGG | - | chr7_3:48908532-48908551 | None:intergenic | 35.0% | |
| CAAACATGACAACAATCTGT+CGG | - | chr7_3:48908533-48908552 | None:intergenic | 35.0% | |
| ACGTTTGTAATTCACATGTG+AGG | + | chr7_3:48908588-48908607 | Msa1107370:intron | 35.0% | |
| AGTTTAACCTTGTAACCTCA+AGG | + | chr7_3:48908629-48908648 | Msa1107370:intron | 35.0% | |
| GTTTAACCTTGTAACCTCAA+GGG | + | chr7_3:48908630-48908649 | Msa1107370:intron | 35.0% | |
| ATGAAGTTCAAATCCCTTCT+TGG | + | chr7_3:48908653-48908672 | Msa1107370:intron | 35.0% | |
| AATCGAATGTAAACACGTGT+CGG | + | chr7_3:48908725-48908744 | Msa1107370:intron | 35.0% | |
| ATGATAGGATTACCATGCAT+AGG | - | chr7_3:48908838-48908857 | None:intergenic | 35.0% | |
| !! | GACGAAAGCATTTGAATGAT+AGG | - | chr7_3:48908853-48908872 | None:intergenic | 35.0% |
| ! | TCCTTCAATCCTTTTGGATT+TGG | + | chr7_3:48908907-48908926 | Msa1107370:intron | 35.0% |
| ! | CCTTCAATCCTTTTGGATTT+GGG | + | chr7_3:48908908-48908927 | Msa1107370:intron | 35.0% |
| ! | CTTCAATCCTTTTGGATTTG+GGG | + | chr7_3:48908909-48908928 | Msa1107370:intron | 35.0% |
| TAAAATCAGCTGCAAAGTTG+AGG | - | chr7_3:48908954-48908973 | None:intergenic | 35.0% | |
| ACTGTGAACCTATCAACAAA+AGG | + | chr7_3:48909062-48909081 | Msa1107370:intron | 35.0% | |
| CTGTGAACCTATCAACAAAA+GGG | + | chr7_3:48909063-48909082 | Msa1107370:intron | 35.0% | |
| ! | CATCATACCCTTTTGTTGAT+AGG | - | chr7_3:48909073-48909092 | None:intergenic | 35.0% |
| ! | CCGAAGATTTGAAATTCCTT+TGG | - | chr7_3:48909104-48909123 | None:intergenic | 35.0% |
| ACATGGAATGCTTTATCTAC+TGG | - | chr7_3:48909238-48909257 | None:intergenic | 35.0% | |
| AAAATGGAGCTTTCTCAACT+TGG | - | chr7_3:48909295-48909314 | None:intergenic | 35.0% | |
| GGACAATGCATAATATATGC+AGG | + | chr7_3:48909623-48909642 | Msa1107370:intron | 35.0% | |
| TGCTATTGTCTTGATTGAGA+AGG | - | chr7_3:48909784-48909803 | None:intergenic | 35.0% | |
| ATACAACCCTGTTTACAAGA+TGG | + | chr7_3:48910235-48910254 | Msa1107370:intron | 35.0% | |
| GTTCCTGTTCTTGTTCATAA+TGG | + | chr7_3:48906132-48906151 | Msa1107370:CDS | 35.0% | |
| TTCCCATTATGAACAAGAAC+AGG | - | chr7_3:48906138-48906157 | None:intergenic | 35.0% | |
| ! | TCATAATGGGAAGCCTATTT+CGG | + | chr7_3:48910271-48910290 | Msa1107370:intron | 35.0% |
| GCTCTTTGATAAGGATCATT+GGG | - | chr7_3:48910353-48910372 | None:intergenic | 35.0% | |
| ! | GTCTAAGTTCATTGATGACA+AGG | + | chr7_3:48910388-48910407 | Msa1107370:intron | 35.0% |
| ! | TAATTTGTGCAATCAGTGTG+TGG | + | chr7_3:48910488-48910507 | Msa1107370:intron | 35.0% |
| TTTGTGTAGCTTCGGAAATT+TGG | - | chr7_3:48910715-48910734 | None:intergenic | 35.0% | |
| AATTTCCGAAGCTACACAAA+TGG | + | chr7_3:48910715-48910734 | Msa1107370:intron | 35.0% | |
| TAATTTCTTTGACGACTGGA+TGG | - | chr7_3:48910758-48910777 | None:intergenic | 35.0% | |
| !! | CCATGTTGTTGTTCTTTTGT+CGG | - | chr7_3:48910783-48910802 | None:intergenic | 35.0% |
| TTTCTCAACAAGTGCTCTAA+AGG | - | chr7_3:48911085-48911104 | None:intergenic | 35.0% | |
| GGCACTTGTTTATGATTCAA+AGG | - | chr7_3:48911165-48911184 | None:intergenic | 35.0% | |
| ! | CATTTTACAATTGTCTCGGA+AGG | - | chr7_3:48911270-48911289 | None:intergenic | 35.0% |
| CTTCCGAGACAATTGTAAAA+TGG | + | chr7_3:48911268-48911287 | Msa1107370:intron | 35.0% | |
| ! | GTAGGTATTGTGTTTAACAC+CGG | + | chr7_3:48911344-48911363 | Msa1107370:intron | 35.0% |
| CATCAGATTAAATGCGTATC+CGG | - | chr7_3:48911366-48911385 | None:intergenic | 35.0% | |
| CTCAATAATCGACTAATCTG+AGG | - | chr7_3:48911455-48911474 | None:intergenic | 35.0% | |
| CTGTTCATGAATCACACATT+AGG | - | chr7_3:48911494-48911513 | None:intergenic | 35.0% | |
| AATTTCCGAAGCTACACAAA+TGG | + | chr7_3:48910715-48910734 | Msa1107370:intron | 35.0% | |
| TAATTTCTTTGACGACTGGA+TGG | - | chr7_3:48910758-48910777 | None:intergenic | 35.0% | |
| !! | CCATGTTGTTGTTCTTTTGT+CGG | - | chr7_3:48910783-48910802 | None:intergenic | 35.0% |
| ACTTGACTGTGTTGAGTTAT+TGG | + | chr7_3:48911959-48911978 | Msa1107370:three_prime_UTR | 35.0% | |
| TGGGAAGTCCATTTGTGATA+AGG | + | chr7_3:48906004-48906023 | Msa1107370:CDS | 40.0% | |
| GGGAAGTCCATTTGTGATAA+GGG | + | chr7_3:48906005-48906024 | Msa1107370:CDS | 40.0% | |
| ACAGGAACCATCCTATAAAC+TGG | - | chr7_3:48906120-48906139 | None:intergenic | 40.0% | |
| !! | ATCACACGTGACTCTGAAAT+AGG | - | chr7_3:48906162-48906181 | None:intergenic | 40.0% |
| TGATCCTTACAAAAGAGCCT+TGG | + | chr7_3:48906230-48906249 | Msa1107370:CDS | 40.0% | |
| CTTACAAAAGAGCCTTGGAT+CGG | + | chr7_3:48906235-48906254 | Msa1107370:CDS | 40.0% | |
| ! | GTCAAGTAATATGTGACGGA+GGG | - | chr7_3:48906354-48906373 | None:intergenic | 40.0% |
| GAGATCACAATTCACAACTG+CGG | - | chr7_3:48906688-48906707 | None:intergenic | 40.0% | |
| TGCGAACCGAATAGTAGTTT+CGG | + | chr7_3:48906722-48906741 | Msa1107370:intron | 40.0% | |
| TGCAGTCCGAAACTACTATT+CGG | - | chr7_3:48906731-48906750 | None:intergenic | 40.0% | |
| GACTCATGTACACATAAGAG+AGG | + | chr7_3:48906856-48906875 | Msa1107370:intron | 40.0% | |
| GTCACCCCTGAAAAAACAAT+TGG | - | chr7_3:48906960-48906979 | None:intergenic | 40.0% | |
| !!! | ATTGTTTTTTCAGGGGTGAC+CGG | + | chr7_3:48906960-48906979 | Msa1107370:intron | 40.0% |
| AATACTCGTGAACCTACAGT+AGG | - | chr7_3:48907005-48907024 | None:intergenic | 40.0% | |
| ! | TGTAGGTTCACGAGTATTGT+TGG | + | chr7_3:48907007-48907026 | Msa1107370:intron | 40.0% |
| CTTGACACACTTACACAACT+TGG | + | chr7_3:48907570-48907589 | Msa1107370:intron | 40.0% | |
| AGCATGGATCACACATTATG+TGG | - | chr7_3:48907948-48907967 | None:intergenic | 40.0% | |
| GTTTCTTGAGAATGAGCTGA+AGG | + | chr7_3:48908136-48908155 | Msa1107370:CDS | 40.0% | |
| ! | TTCTTTGGAGGACAAGAGAT+TGG | + | chr7_3:48908164-48908183 | Msa1107370:CDS | 40.0% |
| ! | CTGCTACTTCTTGGAACAAA+GGG | - | chr7_3:48908217-48908236 | None:intergenic | 40.0% |
| ! | TCTGCTACTTCTTGGAACAA+AGG | - | chr7_3:48908218-48908237 | None:intergenic | 40.0% |
| ! | ACTGTTTCTCTGCTACTTCT+TGG | - | chr7_3:48908226-48908245 | None:intergenic | 40.0% |
| TAACTTCTTTGACGACTGGA+TGG | - | chr7_3:48908304-48908323 | None:intergenic | 40.0% | |
| CATGTGAGGTATGAGTTCAT+TGG | + | chr7_3:48908602-48908621 | Msa1107370:intron | 40.0% | |
| GATTTGAACTTCATCCCTTG+AGG | - | chr7_3:48908647-48908666 | None:intergenic | 40.0% | |
| GTACTTACACTTCGGATTGA+AGG | - | chr7_3:48908774-48908793 | None:intergenic | 40.0% | |
| TCCGAAGTGTAAGTACTACA+TGG | + | chr7_3:48908778-48908797 | Msa1107370:intron | 40.0% | |
| GCCATGTAGTACTTACACTT+CGG | - | chr7_3:48908782-48908801 | None:intergenic | 40.0% | |
| AGAATCTCATGGCAGAAAGA+AGG | - | chr7_3:48908877-48908896 | None:intergenic | 40.0% | |
| TCTGCCATGAGATTCTTTGA+AGG | + | chr7_3:48908881-48908900 | Msa1107370:intron | 40.0% | |
| ACAGCCTTCAAAGAATCTCA+TGG | - | chr7_3:48908888-48908907 | None:intergenic | 40.0% | |
| CCCAAATCCAAAAGGATTGA+AGG | - | chr7_3:48908911-48908930 | None:intergenic | 40.0% | |
| GTATGATGCGTAACTTCCAA+AGG | + | chr7_3:48909085-48909104 | Msa1107370:intron | 40.0% | |
| AGTCAAAGAACCATCCAGTA+GGG | + | chr7_3:48909194-48909213 | Msa1107370:intron | 40.0% | |
| ! | GCATTCCATGTGTCTTTTCT+TGG | + | chr7_3:48909247-48909266 | Msa1107370:intron | 40.0% |
| TAGCTCCAAGAAAAGACACA+TGG | - | chr7_3:48909255-48909274 | None:intergenic | 40.0% | |
| CAGTTCATAAAAGAGGGAAG+AGG | - | chr7_3:48909342-48909361 | None:intergenic | 40.0% | |
| AACTCACACATACAACTGTG+AGG | + | chr7_3:48909456-48909475 | Msa1107370:intron | 40.0% | |
| ! | CACATACAACTGTGAGGTTT+TGG | + | chr7_3:48909462-48909481 | Msa1107370:intron | 40.0% |
| CTAACTAGGACGTTTCACTT+AGG | - | chr7_3:48909495-48909514 | None:intergenic | 40.0% | |
| TACGAACTAAGCTAAGCTCA+CGG | - | chr7_3:48909602-48909621 | None:intergenic | 40.0% | |
| TGAGCTTAGCTTAGTTCGTA+GGG | + | chr7_3:48909602-48909621 | Msa1107370:intron | 40.0% | |
| TGCATAATATATGCAGGGGT+TGG | + | chr7_3:48909629-48909648 | Msa1107370:intron | 40.0% | |
| GCATAATATATGCAGGGGTT+GGG | + | chr7_3:48909630-48909649 | Msa1107370:intron | 40.0% | |
| CATAATATATGCAGGGGTTG+GGG | + | chr7_3:48909631-48909650 | Msa1107370:intron | 40.0% | |
| ! | TTTCTGGTCAAGTAGCCTAT+TGG | - | chr7_3:48909707-48909726 | None:intergenic | 40.0% |
| AATGGCTGCAATTGAAGAAG+AGG | + | chr7_3:48905963-48905982 | Msa1107370:exon | 40.0% | |
| ! | TGAAGAAGAGGTTCAGCTTT+TGG | + | chr7_3:48910100-48910119 | Msa1107370:intron | 40.0% |
| ! | GAAGAAGAGGTTCAGCTTTT+GGG | + | chr7_3:48910101-48910120 | Msa1107370:intron | 40.0% |
| TGGGAAGTCCATTTGTGATA+AGG | + | chr7_3:48906004-48906023 | Msa1107370:CDS | 40.0% | |
| GGGAAGTCCATTTGTGATAA+GGG | + | chr7_3:48906005-48906024 | Msa1107370:CDS | 40.0% | |
| CAGGAACCATCTTGTAAACA+GGG | - | chr7_3:48910244-48910263 | None:intergenic | 40.0% | |
| ACAGGAACCATCTTGTAAAC+AGG | - | chr7_3:48910245-48910264 | None:intergenic | 40.0% | |
| TTGAGTACATCGATGAGACT+TGG | + | chr7_3:48910309-48910328 | Msa1107370:intron | 40.0% | |
| TAAGGATCATTGGGCAAGAT+AGG | - | chr7_3:48910344-48910363 | None:intergenic | 40.0% | |
| GGCTCTTTGATAAGGATCAT+TGG | - | chr7_3:48910354-48910373 | None:intergenic | 40.0% | |
| ! | AAAGAGCCTTCGATCGTTTT+TGG | + | chr7_3:48910366-48910385 | Msa1107370:intron | 40.0% |
| CTTAGACCAAAAACGATCGA+AGG | - | chr7_3:48910375-48910394 | None:intergenic | 40.0% | |
| GTTTCTTGAGAATGAGCTGA+AGG | + | chr7_3:48908136-48908155 | Msa1107370:CDS | 40.0% | |
| GCAGAGTTACAATTGTTCTC+CGG | + | chr7_3:48910687-48910706 | Msa1107370:intron | 40.0% | |
| TGACTCCATTTGTGTAGCTT+CGG | - | chr7_3:48910723-48910742 | None:intergenic | 40.0% | |
| GGCATAATTTCTTTGACGAC+TGG | - | chr7_3:48910762-48910781 | None:intergenic | 40.0% | |
| CCGACAAAAGAACAACAACA+TGG | + | chr7_3:48910780-48910799 | Msa1107370:intron | 40.0% | |
| !! | CAAGTGCCGGTAAATGAATA+TGG | + | chr7_3:48911177-48911196 | Msa1107370:intron | 40.0% |
| GAGTCGTGAAGAATTATTCG+AGG | + | chr7_3:48911643-48911662 | Msa1107370:intron | 40.0% | |
| GTTTCTTGAGAATGAGCTGA+AGG | + | chr7_3:48908136-48908155 | Msa1107370:CDS | 40.0% | |
| TAGCTTCGGAAATTTGTCAC+CGG | - | chr7_3:48911792-48911811 | None:intergenic | 40.0% | |
| TGACTCCATTTGTGTAGCTT+CGG | - | chr7_3:48910723-48910742 | None:intergenic | 40.0% | |
| GGCATAATTTCTTTGACGAC+TGG | - | chr7_3:48910762-48910781 | None:intergenic | 40.0% | |
| CCGACAAAAGAACAACAACA+TGG | + | chr7_3:48910780-48910799 | Msa1107370:intron | 40.0% | |
| !!! | AGTTCAGCTTTTGGGTTCAG+TGG | + | chr7_3:48905984-48906003 | Msa1107370:CDS | 45.0% |
| !!! | GTTCAGCTTTTGGGTTCAGT+GGG | + | chr7_3:48905985-48906004 | Msa1107370:CDS | 45.0% |
| ! | CGATCCAAGGCTCTTTTGTA+AGG | - | chr7_3:48906237-48906256 | None:intergenic | 45.0% |
| !! | AAAGAGCCTTGGATCGGTTT+TGG | + | chr7_3:48906241-48906260 | Msa1107370:CDS | 45.0% |
| CTTAGACCAAAACCGATCCA+AGG | - | chr7_3:48906250-48906269 | None:intergenic | 45.0% | |
| GGTCAAGTAATATGTGACGG+AGG | - | chr7_3:48906355-48906374 | None:intergenic | 45.0% | |
| CATACGTGACAGAGTCAACT+AGG | - | chr7_3:48906376-48906395 | None:intergenic | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | + | chr7_3:48906583-48906602 | Msa1107370:intron | 45.0% | |
| TTGAACCAAACACAAGGGCA+GGG | - | chr7_3:48906918-48906937 | None:intergenic | 45.0% | |
| ATCAGTGTACGATTGCTGCA+TGG | + | chr7_3:48908045-48908064 | Msa1107370:intron | 45.0% | |
| GAGCTGAAGGACAAGTTCTT+TGG | + | chr7_3:48908149-48908168 | Msa1107370:CDS | 45.0% | |
| CTGAAGGACAAGTTCTTTGG+AGG | + | chr7_3:48908152-48908171 | Msa1107370:CDS | 45.0% | |
| !! | AGGACAAGAGATTGGCTTTG+TGG | + | chr7_3:48908172-48908191 | Msa1107370:CDS | 45.0% |
| GCTTGGGAAATTTGTCAGCA+GGG | - | chr7_3:48908253-48908272 | None:intergenic | 45.0% | |
| AGCTTGGGAAATTTGTCAGC+AGG | - | chr7_3:48908254-48908273 | None:intergenic | 45.0% | |
| GGCATAACTTCTTTGACGAC+TGG | - | chr7_3:48908308-48908327 | None:intergenic | 45.0% | |
| !!! | TCTATTTTGACGGAGCAGCA+AGG | - | chr7_3:48908376-48908395 | None:intergenic | 45.0% |
| CTTCATCCCTTGAGGTTACA+AGG | - | chr7_3:48908639-48908658 | None:intergenic | 45.0% | |
| ! | AGGCTGTCCTTCAATCCTTT+TGG | + | chr7_3:48908901-48908920 | Msa1107370:intron | 45.0% |
| GAGTCAAAGAACCATCCAGT+AGG | + | chr7_3:48909193-48909212 | Msa1107370:intron | 45.0% | |
| ACGAACTAAGCTAAGCTCAC+GGG | - | chr7_3:48909601-48909620 | None:intergenic | 45.0% | |
| GTGAGCTTAGCTTAGTTCGT+AGG | + | chr7_3:48909601-48909620 | Msa1107370:intron | 45.0% | |
| ! | ATGTTGAGAAATGGGGTGTC+CGG | - | chr7_3:48909665-48909684 | None:intergenic | 45.0% |
| ! | ATGTGTGAGCTCTAGCCAAT+AGG | + | chr7_3:48909689-48909708 | Msa1107370:intron | 45.0% |
| ATCACACGAGACTCCGAAAT+AGG | - | chr7_3:48910287-48910306 | None:intergenic | 45.0% | |
| CGATCGAAGGCTCTTTGATA+AGG | - | chr7_3:48910362-48910381 | None:intergenic | 45.0% | |
| GAGCTGAAGGACAAGTTCTT+TGG | + | chr7_3:48908149-48908168 | Msa1107370:CDS | 45.0% | |
| CTGAAGGACAAGTTCTTTGG+AGG | + | chr7_3:48908152-48908171 | Msa1107370:CDS | 45.0% | |
| ! | AAGGACAAGTTCTTTGGAGG+AGG | + | chr7_3:48908155-48908174 | Msa1107370:CDS | 45.0% |
| ! | AGGACAAGTTCTTTGGAGGA+GGG | + | chr7_3:48908156-48908175 | Msa1107370:CDS | 45.0% |
| TAGCTTCGGAAATTTGGCAC+CGG | - | chr7_3:48910709-48910728 | None:intergenic | 45.0% | |
| ! | TAATCGACTAATCTGAGGCG+AGG | - | chr7_3:48911450-48911469 | None:intergenic | 45.0% |
| GAGCTGAAGGACAAGTTCTT+TGG | + | chr7_3:48908149-48908168 | Msa1107370:CDS | 45.0% | |
| CTGAAGGACAAGTTCTTTGG+AGG | + | chr7_3:48908152-48908171 | Msa1107370:CDS | 45.0% | |
| ! | AAGGACAAGTTCTTTGGAGG+AGG | + | chr7_3:48908155-48908174 | Msa1107370:CDS | 45.0% |
| ! | AGGACAAGTTCTTTGGAGGA+GGG | + | chr7_3:48908156-48908175 | Msa1107370:CDS | 45.0% |
| GCAGAGTTTCAGTTGTTCTC+CGG | + | chr7_3:48911770-48911789 | Msa1107370:intron | 45.0% | |
| GGTCAAGTAATATGGGACGG+AGG | + | chr7_3:48906582-48906601 | Msa1107370:intron | 50.0% | |
| CGGAGGGAGTAGTTAGATTG+TGG | + | chr7_3:48906599-48906618 | Msa1107370:intron | 50.0% | |
| TGAACCAAACACAAGGGCAG+GGG | - | chr7_3:48906917-48906936 | None:intergenic | 50.0% | |
| GTTGAACCAAACACAAGGGC+AGG | - | chr7_3:48906919-48906938 | None:intergenic | 50.0% | |
| !! | TAGCTGCTCTAAAGCAGCAG+AGG | + | chr7_3:48907104-48907123 | Msa1107370:intron | 50.0% |
| !! | TGCTCTAAAGCAGCAGAGGT+AGG | + | chr7_3:48907108-48907127 | Msa1107370:intron | 50.0% |
| CAAGAGAAGATCCTTGGCAG+TGG | + | chr7_3:48907662-48907681 | Msa1107370:intron | 50.0% | |
| AAACACTGTCTCCACTGCCA+AGG | - | chr7_3:48907676-48907695 | None:intergenic | 50.0% | |
| TTCTCGCGCTCTTTCTCATC+AGG | - | chr7_3:48908086-48908105 | None:intergenic | 50.0% | |
| ! | TGATGAGAAAGAGCGCGAGA+AGG | + | chr7_3:48908085-48908104 | Msa1107370:CDS | 50.0% |
| GGCTCGTGAAGAACTATTCG+AGG | + | chr7_3:48908106-48908125 | Msa1107370:CDS | 50.0% | |
| !! | GTCGGTGTCGTGTTTAACAC+TGG | + | chr7_3:48908743-48908762 | Msa1107370:intron | 50.0% |
| AACCATCCAGTAGGGAGTAG+TGG | + | chr7_3:48909202-48909221 | Msa1107370:intron | 50.0% | |
| AATGAGCCACTACTCCCTAC+TGG | - | chr7_3:48909211-48909230 | None:intergenic | 50.0% | |
| CGAACTAAGCTAAGCTCACG+GGG | - | chr7_3:48909600-48909619 | None:intergenic | 50.0% | |
| ! | TGTTGAGAAATGGGGTGTCC+GGG | - | chr7_3:48909664-48909683 | None:intergenic | 50.0% |
| !! | GTTCAGCTTTTGGGTGCAGT+GGG | + | chr7_3:48910110-48910129 | Msa1107370:intron | 50.0% |
| TTCTCGCGCTCTTTCTCATC+AGG | - | chr7_3:48908086-48908105 | None:intergenic | 50.0% | |
| ! | TGATGAGAAAGAGCGCGAGA+AGG | + | chr7_3:48908085-48908104 | Msa1107370:CDS | 50.0% |
| ! | GGACAAGTTCTTTGGAGGAG+GGG | + | chr7_3:48910611-48910630 | Msa1107370:intron | 50.0% |
| !! | AGGAGGGGAGATTAGCTTTG+TGG | + | chr7_3:48910626-48910645 | Msa1107370:intron | 50.0% |
| ACCCCTGATGAGAAAGAACG+CGG | + | chr7_3:48911617-48911636 | Msa1107370:intron | 50.0% | |
| TCCCGCGTTCTTTCTCATCA+GGG | - | chr7_3:48911622-48911641 | None:intergenic | 50.0% | |
| TTCCCGCGTTCTTTCTCATC+AGG | - | chr7_3:48911623-48911642 | None:intergenic | 50.0% | |
| ! | GGACAAGTTCTTTGGAGGAG+GGG | + | chr7_3:48910611-48910630 | Msa1107370:intron | 50.0% |
| !! | AGGAGGGGAGATTAGCTTTG+TGG | + | chr7_3:48910626-48910645 | Msa1107370:intron | 50.0% |
| AGCCACTACTCCCTACTGGA+TGG | - | chr7_3:48909207-48909226 | None:intergenic | 55.0% | |
| ! | GTTGAGAAATGGGGTGTCCG+GGG | - | chr7_3:48909663-48909682 | None:intergenic | 55.0% |
| !! | GGTTCAGCTTTTGGGTGCAG+TGG | + | chr7_3:48910109-48910128 | Msa1107370:intron | 55.0% |
| ATCAGTGTGTGGCTGCTGCA+TGG | + | chr7_3:48910499-48910518 | Msa1107370:intron | 55.0% | |
| GGCTCGCGAAGAGTTATTCG+AGG | + | chr7_3:48910560-48910579 | Msa1107370:intron | 55.0% | |
| CCCGCGTTCTTTCTCATCAG+GGG | - | chr7_3:48911621-48911640 | None:intergenic | 55.0% | |
| CCCCTGATGAGAAAGAACGC+GGG | + | chr7_3:48911618-48911637 | Msa1107370:intron | 55.0% | |
| ACCAAACACAAGGGCAGGGG+CGG | - | chr7_3:48906914-48906933 | None:intergenic | 60.0% | |
| CTATCGCTCCCCACACTCAC+CGG | - | chr7_3:48906982-48907001 | None:intergenic | 60.0% | |
| GGGGAGCGATAGCCTACTGT+AGG | + | chr7_3:48906990-48907009 | Msa1107370:intron | 60.0% | |
| GCAGCAGAGGTAGGCGTCAT+TGG | + | chr7_3:48907117-48907136 | Msa1107370:intron | 60.0% | |
| AACACAAGGGCAGGGGCGGA+GGG | - | chr7_3:48906910-48906929 | None:intergenic | 65.0% | |
| AAACACAAGGGCAGGGGCGG+AGG | - | chr7_3:48906911-48906930 | None:intergenic | 65.0% | |
| TCCGCCCCTGCCCTTGTGTT+TGG | + | chr7_3:48906910-48906929 | Msa1107370:intron | 65.0% | |
| TCAGGGGTGACCGGTGAGTG+TGG | + | chr7_3:48906969-48906988 | Msa1107370:intron | 65.0% | |
| CAGGGGTGACCGGTGAGTGT+GGG | + | chr7_3:48906970-48906989 | Msa1107370:intron | 65.0% | |
| AGGGGTGACCGGTGAGTGTG+GGG | + | chr7_3:48906971-48906990 | Msa1107370:intron | 65.0% | |
| AGGGGTTGGGGTTCGAACCC+CGG | + | chr7_3:48909643-48909662 | Msa1107370:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 48905836 | 48912090 | 48905836 | ID=Msa1107370;Name=Msa1107370 |
| chr7_3 | mRNA | 48905836 | 48912090 | 48905836 | ID=Msa1107370-mRNA-1;Parent=Msa1107370;Name=Msa1107370-mRNA-1;_AED=0.33;_eAED=0.33;_QI=128|1|1|1|0.5|0.33|3|176|221 |
| chr7_3 | exon | 48905836 | 48906284 | 48905836 | ID=Msa1107370-mRNA-1:exon:9947;Parent=Msa1107370-mRNA-1 |
| chr7_3 | exon | 48908050 | 48908426 | 48908050 | ID=Msa1107370-mRNA-1:exon:9948;Parent=Msa1107370-mRNA-1 |
| chr7_3 | exon | 48911947 | 48912090 | 48911947 | ID=Msa1107370-mRNA-1:exon:9949;Parent=Msa1107370-mRNA-1 |
| chr7_3 | five_prime_UTR | 48905836 | 48905963 | 48905836 | ID=Msa1107370-mRNA-1:five_prime_utr;Parent=Msa1107370-mRNA-1 |
| chr7_3 | CDS | 48905964 | 48906284 | 48905964 | ID=Msa1107370-mRNA-1:cds;Parent=Msa1107370-mRNA-1 |
| chr7_3 | CDS | 48908050 | 48908394 | 48908050 | ID=Msa1107370-mRNA-1:cds;Parent=Msa1107370-mRNA-1 |
| chr7_3 | three_prime_UTR | 48908395 | 48908426 | 48908395 | ID=Msa1107370-mRNA-1:three_prime_utr;Parent=Msa1107370-mRNA-1 |
| chr7_3 | three_prime_UTR | 48911947 | 48912090 | 48911947 | ID=Msa1107370-mRNA-1:three_prime_utr;Parent=Msa1107370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
