Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0011930 | XP_003589617.1 | 99.422 | 173 | 1 | 0 | 1 | 173 | 1 | 173 | 2.46e-123 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0011930 | sp|Q9C6Z2|NUD25_ARATH | 77.714 | 175 | 37 | 1 | 1 | 173 | 1 | 175 | 4.98e-100 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0011930 | 0.806858 | 6.707272e-50 | -8.615850e-47 |
| Msa0011930 | Msa0014570 | 0.819189 | 1.323573e-52 | -8.615850e-47 |
| Msa0011930 | Msa0030280 | 0.817110 | 3.908244e-52 | -8.615850e-47 |
| Msa0011930 | Msa0032320 | 0.820585 | 6.346365e-53 | -8.615850e-47 |
| Msa0011930 | Msa0035120 | 0.832803 | 7.674250e-56 | -8.615850e-47 |
| Msa0011930 | Msa0036130 | 0.808813 | 2.575230e-50 | -8.615850e-47 |
| Msa0011930 | Msa0039250 | 0.820395 | 7.016866e-53 | -8.615850e-47 |
| Msa0011930 | Msa0041690 | 0.806413 | 8.325482e-50 | -8.615850e-47 |
| Msa0011930 | Msa0043500 | 0.809914 | 1.495080e-50 | -8.615850e-47 |
| Msa0011930 | Msa0043650 | 0.804517 | 2.079737e-49 | -8.615850e-47 |
| Msa0011930 | Msa0052870 | 0.835756 | 1.393840e-56 | -8.615850e-47 |
| Msa0011930 | Msa0054530 | 0.800126 | 1.668237e-48 | -8.615850e-47 |
| Msa0011930 | Msa0054820 | 0.807954 | 3.926738e-50 | -8.615850e-47 |
| Msa0011930 | Msa0056450 | 0.849020 | 4.227186e-60 | -8.615850e-47 |
| Msa0011930 | Msa0060760 | 0.850601 | 1.527972e-60 | -8.615850e-47 |
| Msa0011930 | Msa0061340 | 0.806208 | 9.197489e-50 | -8.615850e-47 |
| Msa0011930 | Msa0065680 | -0.801565 | 8.481002e-49 | -8.615850e-47 |
| Msa0011930 | Msa0072720 | 0.810898 | 9.169212e-51 | -8.615850e-47 |
| Msa0011930 | Msa0077880 | 0.800183 | 1.624085e-48 | -8.615850e-47 |
| Msa0011930 | Msa0078640 | 0.809580 | 1.763532e-50 | -8.615850e-47 |
| Msa0011930 | Msa0093850 | 0.812345 | 4.441637e-51 | -8.615850e-47 |
| Msa0011930 | Msa0097810 | 0.805275 | 1.443794e-49 | -8.615850e-47 |
| Msa0011930 | Msa0098470 | 0.821990 | 3.009744e-53 | -8.615850e-47 |
| Msa0011930 | Msa0100160 | 0.802540 | 5.344309e-49 | -8.615850e-47 |
| Msa0011930 | Msa0103250 | 0.800398 | 1.468319e-48 | -8.615850e-47 |
| Msa0011930 | Msa0104700 | 0.811656 | 6.275923e-51 | -8.615850e-47 |
| Msa0011930 | Msa0105120 | 0.830469 | 2.885144e-55 | -8.615850e-47 |
| Msa0011930 | Msa0106620 | 0.844605 | 6.815380e-59 | -8.615850e-47 |
| Msa0011930 | Msa0106710 | 0.843676 | 1.209934e-58 | -8.615850e-47 |
| Msa0011930 | Msa0108390 | 0.865806 | 4.519148e-65 | -8.615850e-47 |
| Msa0011930 | Msa0108410 | 0.824735 | 6.870923e-54 | -8.615850e-47 |
| Msa0011930 | Msa0116790 | 0.823274 | 1.512872e-53 | -8.615850e-47 |
| Msa0011930 | Msa0125770 | 0.810059 | 1.391549e-50 | -8.615850e-47 |
| Msa0011930 | Msa0127100 | 0.804800 | 1.815498e-49 | -8.615850e-47 |
| Msa0011930 | Msa0133720 | 0.837042 | 6.564759e-57 | -8.615850e-47 |
| Msa0011930 | Msa0133820 | 0.839833 | 1.250550e-57 | -8.615850e-47 |
| Msa0011930 | Msa0138360 | 0.844552 | 7.042547e-59 | -8.615850e-47 |
| Msa0011930 | Msa0142460 | 0.810148 | 1.331549e-50 | -8.615850e-47 |
| Msa0011930 | Msa0144360 | 0.822392 | 2.427347e-53 | -8.615850e-47 |
| Msa0011930 | Msa0147980 | 0.840001 | 1.131051e-57 | -8.615850e-47 |
| Msa0011930 | Msa0150990 | 0.826511 | 2.606404e-54 | -8.615850e-47 |
| Msa0011930 | Msa0152400 | 0.807801 | 4.233589e-50 | -8.615850e-47 |
| Msa0011930 | Msa0154440 | 0.806790 | 6.932988e-50 | -8.615850e-47 |
| Msa0011930 | Msa0158130 | -0.813544 | 2.425298e-51 | -8.615850e-47 |
| Msa0011930 | Msa0170410 | 0.801761 | 7.730587e-49 | -8.615850e-47 |
| Msa0011930 | Msa0171850 | 0.809344 | 1.982080e-50 | -8.615850e-47 |
| Msa0011930 | Msa0181000 | 0.805409 | 1.353445e-49 | -8.615850e-47 |
| Msa0011930 | Msa0181230 | 0.817551 | 3.109591e-52 | -8.615850e-47 |
| Msa0011930 | Msa0187030 | 0.846504 | 2.083708e-59 | -8.615850e-47 |
| Msa0011930 | Msa0187830 | 0.804980 | 1.664777e-49 | -8.615850e-47 |
| Msa0011930 | Msa0191890 | 0.810164 | 1.320733e-50 | -8.615850e-47 |
| Msa0011930 | Msa0192640 | 0.822693 | 2.066042e-53 | -8.615850e-47 |
| Msa0011930 | Msa0196340 | 0.803411 | 3.531932e-49 | -8.615850e-47 |
| Msa0011930 | Msa0205010 | 0.814606 | 1.414115e-51 | -8.615850e-47 |
| Msa0011930 | Msa0207350 | 0.853440 | 2.385775e-61 | -8.615850e-47 |
| Msa0011930 | Msa0217290 | 0.802878 | 4.552270e-49 | -8.615850e-47 |
| Msa0011930 | Msa0220730 | 0.837847 | 4.082328e-57 | -8.615850e-47 |
| Msa0011930 | Msa0223330 | 0.803547 | 3.309877e-49 | -8.615850e-47 |
| Msa0011930 | Msa0225640 | 0.802047 | 6.751609e-49 | -8.615850e-47 |
| Msa0011930 | Msa0227340 | 0.809801 | 1.581442e-50 | -8.615850e-47 |
| Msa0011930 | Msa0229920 | 0.816322 | 5.871759e-52 | -8.615850e-47 |
| Msa0011930 | Msa0230370 | 0.830116 | 3.520199e-55 | -8.615850e-47 |
| Msa0011930 | Msa0231190 | 0.800730 | 1.256736e-48 | -8.615850e-47 |
| Msa0011930 | Msa0233380 | 0.819309 | 1.242950e-52 | -8.615850e-47 |
| Msa0011930 | Msa0237210 | 0.820773 | 5.746519e-53 | -8.615850e-47 |
| Msa0011930 | Msa0238030 | 0.807344 | 5.290949e-50 | -8.615850e-47 |
| Msa0011930 | Msa0238230 | 0.806726 | 7.150537e-50 | -8.615850e-47 |
| Msa0011930 | Msa0241140 | 0.806947 | 6.421514e-50 | -8.615850e-47 |
| Msa0011930 | Msa0241830 | 0.843349 | 1.479971e-58 | -8.615850e-47 |
| Msa0011930 | Msa0249580 | 0.807094 | 5.979564e-50 | -8.615850e-47 |
| Msa0011930 | Msa0253290 | 0.810315 | 1.225244e-50 | -8.615850e-47 |
| Msa0011930 | Msa0254940 | 0.800645 | 1.307559e-48 | -8.615850e-47 |
| Msa0011930 | Msa0258690 | 0.803818 | 2.906996e-49 | -8.615850e-47 |
| Msa0011930 | Msa0259210 | 0.810357 | 1.199971e-50 | -8.615850e-47 |
| Msa0011930 | Msa0259220 | 0.813406 | 2.602015e-51 | -8.615850e-47 |
| Msa0011930 | Msa0264830 | 0.818915 | 1.527776e-52 | -8.615850e-47 |
| Msa0011930 | Msa0267920 | 0.801302 | 9.600996e-49 | -8.615850e-47 |
| Msa0011930 | Msa0277420 | 0.843659 | 1.223145e-58 | -8.615850e-47 |
| Msa0011930 | Msa0279850 | 0.831155 | 1.959788e-55 | -8.615850e-47 |
| Msa0011930 | Msa0281430 | 0.813340 | 2.690008e-51 | -8.615850e-47 |
| Msa0011930 | Msa0288080 | 0.827098 | 1.887369e-54 | -8.615850e-47 |
| Msa0011930 | Msa0290980 | 0.822258 | 2.608501e-53 | -8.615850e-47 |
| Msa0011930 | Msa0296250 | 0.810864 | 9.323028e-51 | -8.615850e-47 |
| Msa0011930 | Msa0296790 | 0.823184 | 1.587916e-53 | -8.615850e-47 |
| Msa0011930 | Msa0297790 | 0.808683 | 2.745720e-50 | -8.615850e-47 |
| Msa0011930 | Msa0300320 | 0.811475 | 6.873294e-51 | -8.615850e-47 |
| Msa0011930 | Msa0302870 | 0.803931 | 2.754299e-49 | -8.615850e-47 |
| Msa0011930 | Msa0307570 | 0.831154 | 1.960486e-55 | -8.615850e-47 |
| Msa0011930 | Msa0311060 | 0.808193 | 3.493617e-50 | -8.615850e-47 |
| Msa0011930 | Msa0311730 | 0.818244 | 2.168657e-52 | -8.615850e-47 |
| Msa0011930 | Msa0312530 | 0.830743 | 2.472838e-55 | -8.615850e-47 |
| Msa0011930 | Msa0312910 | 0.830150 | 3.452404e-55 | -8.615850e-47 |
| Msa0011930 | Msa0315690 | 0.807030 | 6.166683e-50 | -8.615850e-47 |
| Msa0011930 | Msa0317270 | 0.823663 | 1.226875e-53 | -8.615850e-47 |
| Msa0011930 | Msa0317970 | 0.846073 | 2.730259e-59 | -8.615850e-47 |
| Msa0011930 | Msa0322900 | 0.846752 | 1.782653e-59 | -8.615850e-47 |
| Msa0011930 | Msa0335800 | 0.846775 | 1.756975e-59 | -8.615850e-47 |
| Msa0011930 | Msa0336310 | 0.801684 | 8.017403e-49 | -8.615850e-47 |
| Msa0011930 | Msa0339910 | 0.818654 | 1.750916e-52 | -8.615850e-47 |
| Msa0011930 | Msa0340340 | 0.815609 | 8.469930e-52 | -8.615850e-47 |
| Msa0011930 | Msa0341690 | 0.817295 | 3.550946e-52 | -8.615850e-47 |
| Msa0011930 | Msa0342010 | 0.813777 | 2.155849e-51 | -8.615850e-47 |
| Msa0011930 | Msa0347550 | 0.802034 | 6.793674e-49 | -8.615850e-47 |
| Msa0011930 | Msa0358890 | 0.819886 | 9.175882e-53 | -8.615850e-47 |
| Msa0011930 | Msa0363810 | 0.807719 | 4.405272e-50 | -8.615850e-47 |
| Msa0011930 | Msa0365100 | 0.813182 | 2.913569e-51 | -8.615850e-47 |
| Msa0011930 | Msa0367870 | 0.811121 | 8.203381e-51 | -8.615850e-47 |
| Msa0011930 | Msa0378720 | 0.810400 | 1.174521e-50 | -8.615850e-47 |
| Msa0011930 | Msa0382370 | 0.827848 | 1.247220e-54 | -8.615850e-47 |
| Msa0011930 | Msa0389910 | 0.819633 | 1.048074e-52 | -8.615850e-47 |
| Msa0011930 | Msa0394690 | 0.820795 | 5.677960e-53 | -8.615850e-47 |
| Msa0011930 | Msa0395980 | 0.803219 | 3.870660e-49 | -8.615850e-47 |
| Msa0011930 | Msa0403640 | 0.811164 | 8.028416e-51 | -8.615850e-47 |
| Msa0011930 | Msa0403660 | 0.860272 | 2.318484e-63 | -8.615850e-47 |
| Msa0011930 | Msa0411410 | 0.840382 | 8.991842e-58 | -8.615850e-47 |
| Msa0011930 | Msa0419720 | 0.804935 | 1.701211e-49 | -8.615850e-47 |
| Msa0011930 | Msa0427120 | 0.802367 | 5.801275e-49 | -8.615850e-47 |
| Msa0011930 | Msa0432160 | 0.837598 | 4.730688e-57 | -8.615850e-47 |
| Msa0011930 | Msa0432670 | 0.815544 | 8.757543e-52 | -8.615850e-47 |
| Msa0011930 | Msa0434570 | 0.817426 | 3.318941e-52 | -8.615850e-47 |
| Msa0011930 | Msa0434770 | 0.814376 | 1.589759e-51 | -8.615850e-47 |
| Msa0011930 | Msa0450400 | -0.835085 | 2.060385e-56 | -8.615850e-47 |
| Msa0011930 | Msa0451070 | 0.807844 | 4.144088e-50 | -8.615850e-47 |
| Msa0011930 | Msa0460590 | 0.806145 | 9.480321e-50 | -8.615850e-47 |
| Msa0011930 | Msa0467100 | 0.847516 | 1.100543e-59 | -8.615850e-47 |
| Msa0011930 | Msa0468410 | 0.824653 | 7.185351e-54 | -8.615850e-47 |
| Msa0011930 | Msa0473980 | 0.808961 | 2.394193e-50 | -8.615850e-47 |
| Msa0011930 | Msa0476680 | 0.839929 | 1.180407e-57 | -8.615850e-47 |
| Msa0011930 | Msa0479200 | 0.833612 | 4.825846e-56 | -8.615850e-47 |
| Msa0011930 | Msa0481970 | 0.809065 | 2.274455e-50 | -8.615850e-47 |
| Msa0011930 | Msa0485240 | 0.845924 | 2.997688e-59 | -8.615850e-47 |
| Msa0011930 | Msa0491000 | 0.814534 | 1.466807e-51 | -8.615850e-47 |
| Msa0011930 | Msa0498450 | 0.803224 | 3.860608e-49 | -8.615850e-47 |
| Msa0011930 | Msa0511770 | 0.809074 | 2.265048e-50 | -8.615850e-47 |
| Msa0011930 | Msa0516120 | 0.810213 | 1.289159e-50 | -8.615850e-47 |
| Msa0011930 | Msa0517640 | 0.805269 | 1.448496e-49 | -8.615850e-47 |
| Msa0011930 | Msa0518030 | 0.844729 | 6.310645e-59 | -8.615850e-47 |
| Msa0011930 | Msa0521010 | 0.836201 | 1.074800e-56 | -8.615850e-47 |
| Msa0011930 | Msa0527190 | 0.822971 | 1.780230e-53 | -8.615850e-47 |
| Msa0011930 | Msa0531250 | 0.804632 | 1.967742e-49 | -8.615850e-47 |
| Msa0011930 | Msa0538910 | 0.819009 | 1.454708e-52 | -8.615850e-47 |
| Msa0011930 | Msa0547990 | 0.815135 | 1.079440e-51 | -8.615850e-47 |
| Msa0011930 | Msa0553200 | 0.816245 | 6.108710e-52 | -8.615850e-47 |
| Msa0011930 | Msa0556010 | 0.852164 | 5.523720e-61 | -8.615850e-47 |
| Msa0011930 | Msa0576680 | 0.807090 | 5.991329e-50 | -8.615850e-47 |
| Msa0011930 | Msa0579660 | 0.838328 | 3.069207e-57 | -8.615850e-47 |
| Msa0011930 | Msa0581690 | 0.863439 | 2.488476e-64 | -8.615850e-47 |
| Msa0011930 | Msa0583500 | 0.820048 | 8.427037e-53 | -8.615850e-47 |
| Msa0011930 | Msa0584550 | 0.814988 | 1.163865e-51 | -8.615850e-47 |
| Msa0011930 | Msa0588220 | 0.802390 | 5.739275e-49 | -8.615850e-47 |
| Msa0011930 | Msa0597770 | 0.823037 | 1.718123e-53 | -8.615850e-47 |
| Msa0011930 | Msa0601950 | 0.822748 | 2.006972e-53 | -8.615850e-47 |
| Msa0011930 | Msa0616450 | 0.823788 | 1.146928e-53 | -8.615850e-47 |
| Msa0011930 | Msa0626270 | 0.805586 | 1.242591e-49 | -8.615850e-47 |
| Msa0011930 | Msa0629240 | 0.800197 | 1.613208e-48 | -8.615850e-47 |
| Msa0011930 | Msa0638350 | 0.824443 | 8.050569e-54 | -8.615850e-47 |
| Msa0011930 | Msa0641730 | 0.805588 | 1.241380e-49 | -8.615850e-47 |
| Msa0011930 | Msa0641740 | 0.832438 | 9.452744e-56 | -8.615850e-47 |
| Msa0011930 | Msa0655920 | 0.812693 | 3.729374e-51 | -8.615850e-47 |
| Msa0011930 | Msa0656000 | 0.805713 | 1.169083e-49 | -8.615850e-47 |
| Msa0011930 | Msa0659550 | 0.801728 | 7.851262e-49 | -8.615850e-47 |
| Msa0011930 | Msa0661320 | 0.830088 | 3.574690e-55 | -8.615850e-47 |
| Msa0011930 | Msa0669180 | 0.810390 | 1.180461e-50 | -8.615850e-47 |
| Msa0011930 | Msa0689760 | 0.819437 | 1.162032e-52 | -8.615850e-47 |
| Msa0011930 | Msa0693330 | 0.803147 | 4.005482e-49 | -8.615850e-47 |
| Msa0011930 | Msa0698290 | 0.802120 | 6.524057e-49 | -8.615850e-47 |
| Msa0011930 | Msa0710270 | 0.807100 | 5.960082e-50 | -8.615850e-47 |
| Msa0011930 | Msa0712560 | 0.810265 | 1.256291e-50 | -8.615850e-47 |
| Msa0011930 | Msa0716860 | 0.822950 | 1.800805e-53 | -8.615850e-47 |
| Msa0011930 | Msa0721280 | 0.803281 | 3.756959e-49 | -8.615850e-47 |
| Msa0011930 | Msa0740720 | 0.824165 | 9.356405e-54 | -8.615850e-47 |
| Msa0011930 | Msa0750250 | 0.813279 | 2.773818e-51 | -8.615850e-47 |
| Msa0011930 | Msa0751260 | 0.839627 | 1.415476e-57 | -8.615850e-47 |
| Msa0011930 | Msa0780930 | 0.804433 | 2.165061e-49 | -8.615850e-47 |
| Msa0011930 | Msa0784480 | 0.803010 | 4.274653e-49 | -8.615850e-47 |
| Msa0011930 | Msa0789560 | 0.802992 | 4.310633e-49 | -8.615850e-47 |
| Msa0011930 | Msa0795070 | 0.840120 | 1.052621e-57 | -8.615850e-47 |
| Msa0011930 | Msa0800700 | 0.805500 | 1.295469e-49 | -8.615850e-47 |
| Msa0011930 | Msa0805450 | 0.804386 | 2.214559e-49 | -8.615850e-47 |
| Msa0011930 | Msa0826150 | 0.805301 | 1.426062e-49 | -8.615850e-47 |
| Msa0011930 | Msa0828240 | 0.805183 | 1.509383e-49 | -8.615850e-47 |
| Msa0011930 | Msa0832090 | 0.800595 | 1.338657e-48 | -8.615850e-47 |
| Msa0011930 | Msa0833190 | -0.804025 | 2.633646e-49 | -8.615850e-47 |
| Msa0011930 | Msa0837410 | 0.822006 | 2.984182e-53 | -8.615850e-47 |
| Msa0011930 | Msa0853520 | 0.800022 | 1.751574e-48 | -8.615850e-47 |
| Msa0011930 | Msa0861450 | 0.828168 | 1.044573e-54 | -8.615850e-47 |
| Msa0011930 | Msa0861510 | 0.807724 | 4.394427e-50 | -8.615850e-47 |
| Msa0011930 | Msa0861530 | 0.812214 | 4.744791e-51 | -8.615850e-47 |
| Msa0011930 | Msa0861600 | 0.806064 | 9.860386e-50 | -8.615850e-47 |
| Msa0011930 | Msa0866400 | 0.801349 | 9.391055e-49 | -8.615850e-47 |
| Msa0011930 | Msa0866410 | 0.800085 | 1.700759e-48 | -8.615850e-47 |
| Msa0011930 | Msa0868160 | 0.830364 | 3.062212e-55 | -8.615850e-47 |
| Msa0011930 | Msa0870520 | 0.850920 | 1.243073e-60 | -8.615850e-47 |
| Msa0011930 | Msa0870540 | 0.845261 | 4.534455e-59 | -8.615850e-47 |
| Msa0011930 | Msa0870650 | 0.836040 | 1.181296e-56 | -8.615850e-47 |
| Msa0011930 | Msa0871720 | 0.832724 | 8.028970e-56 | -8.615850e-47 |
| Msa0011930 | Msa0878510 | 0.816165 | 6.363349e-52 | -8.615850e-47 |
| Msa0011930 | Msa0903710 | 0.844048 | 9.623853e-59 | -8.615850e-47 |
| Msa0011930 | Msa0903780 | 0.823537 | 1.313294e-53 | -8.615850e-47 |
| Msa0011930 | Msa0921420 | 0.805793 | 1.124688e-49 | -8.615850e-47 |
| Msa0011930 | Msa0932350 | 0.803091 | 4.113722e-49 | -8.615850e-47 |
| Msa0011930 | Msa0936380 | 0.862798 | 3.926622e-64 | -8.615850e-47 |
| Msa0011930 | Msa0936390 | 0.805524 | 1.280583e-49 | -8.615850e-47 |
| Msa0011930 | Msa0937020 | 0.847370 | 1.207087e-59 | -8.615850e-47 |
| Msa0011930 | Msa0944200 | 0.841144 | 5.677061e-58 | -8.615850e-47 |
| Msa0011930 | Msa0944610 | 0.809760 | 1.613847e-50 | -8.615850e-47 |
| Msa0011930 | Msa0962840 | 0.816579 | 5.141672e-52 | -8.615850e-47 |
| Msa0011930 | Msa0973140 | 0.847473 | 1.130793e-59 | -8.615850e-47 |
| Msa0011930 | Msa0974290 | 0.805568 | 1.253539e-49 | -8.615850e-47 |
| Msa0011930 | Msa0986510 | 0.800414 | 1.457337e-48 | -8.615850e-47 |
| Msa0011930 | Msa0992600 | 0.808358 | 3.221422e-50 | -8.615850e-47 |
| Msa0011930 | Msa1009750 | 0.824757 | 6.790542e-54 | -8.615850e-47 |
| Msa0011930 | Msa1022820 | 0.812280 | 4.589241e-51 | -8.615850e-47 |
| Msa0011930 | Msa1027360 | 0.806185 | 9.301990e-50 | -8.615850e-47 |
| Msa0011930 | Msa1033660 | 0.821065 | 4.921001e-53 | -8.615850e-47 |
| Msa0011930 | Msa1034500 | 0.840108 | 1.060617e-57 | -8.615850e-47 |
| Msa0011930 | Msa1050700 | 0.819590 | 1.072290e-52 | -8.615850e-47 |
| Msa0011930 | Msa1050740 | 0.824066 | 9.872874e-54 | -8.615850e-47 |
| Msa0011930 | Msa1051330 | 0.802226 | 6.202599e-49 | -8.615850e-47 |
| Msa0011930 | Msa1059960 | 0.812658 | 3.795512e-51 | -8.615850e-47 |
| Msa0011930 | Msa1061980 | 0.874119 | 8.659227e-68 | -8.615850e-47 |
| Msa0011930 | Msa1064250 | 0.800239 | 1.582465e-48 | -8.615850e-47 |
| Msa0011930 | Msa1073490 | 0.810436 | 1.153611e-50 | -8.615850e-47 |
| Msa0011930 | Msa1079230 | 0.804643 | 1.957239e-49 | -8.615850e-47 |
| Msa0011930 | Msa1080640 | 0.802293 | 6.010091e-49 | -8.615850e-47 |
| Msa0011930 | Msa1089450 | 0.833434 | 5.346254e-56 | -8.615850e-47 |
| Msa0011930 | Msa1093100 | 0.802434 | 5.619497e-49 | -8.615850e-47 |
| Msa0011930 | Msa1095650 | 0.811171 | 7.999340e-51 | -8.615850e-47 |
| Msa0011930 | Msa1097820 | 0.822321 | 2.522192e-53 | -8.615850e-47 |
| Msa0011930 | Msa1098890 | 0.814325 | 1.632118e-51 | -8.615850e-47 |
| Msa0011930 | Msa1105160 | 0.800427 | 1.448342e-48 | -8.615850e-47 |
| Msa0011930 | Msa1107370 | 0.802679 | 5.003987e-49 | -8.615850e-47 |
| Msa0011930 | Msa1127590 | 0.806468 | 8.106918e-50 | -8.615850e-47 |
| Msa0011930 | Msa1137570 | 0.803944 | 2.737065e-49 | -8.615850e-47 |
| Msa0011930 | Msa1142670 | 0.826781 | 2.247119e-54 | -8.615850e-47 |
| Msa0011930 | Msa1160310 | 0.814074 | 1.853918e-51 | -8.615850e-47 |
| Msa0011930 | Msa1163540 | 0.822082 | 2.864877e-53 | -8.615850e-47 |
| Msa0011930 | Msa1168550 | 0.830544 | 2.766864e-55 | -8.615850e-47 |
| Msa0011930 | Msa1168590 | 0.823931 | 1.061911e-53 | -8.615850e-47 |
| Msa0011930 | Msa1173300 | 0.812094 | 5.040222e-51 | -8.615850e-47 |
| Msa0011930 | Msa1188560 | 0.836100 | 1.140457e-56 | -8.615850e-47 |
| Msa0011930 | Msa1189650 | 0.800958 | 1.128887e-48 | -8.615850e-47 |
| Msa0011930 | Msa1201810 | 0.800539 | 1.374728e-48 | -8.615850e-47 |
| Msa0011930 | Msa1204100 | -0.836871 | 7.256042e-57 | -8.615850e-47 |
| Msa0011930 | Msa1208220 | 0.802546 | 5.328772e-49 | -8.615850e-47 |
| Msa0011930 | Msa1208580 | 0.827715 | 1.342224e-54 | -8.615850e-47 |
| Msa0011930 | Msa1211340 | 0.811957 | 5.397040e-51 | -8.615850e-47 |
| Msa0011930 | Msa1226270 | 0.802254 | 6.121252e-49 | -8.615850e-47 |
| Msa0011930 | Msa1230130 | 0.810260 | 1.258931e-50 | -8.615850e-47 |
| Msa0011930 | Msa1236460 | 0.802082 | 6.642433e-49 | -8.615850e-47 |
| Msa0011930 | Msa1242640 | 0.815179 | 1.055666e-51 | -8.615850e-47 |
| Msa0011930 | Msa1243870 | 0.821126 | 4.765937e-53 | -8.615850e-47 |
| Msa0011930 | Msa1252850 | -0.831963 | 1.238851e-55 | -8.615850e-47 |
| Msa0011930 | Msa1258170 | 0.808675 | 2.756317e-50 | -8.615850e-47 |
| Msa0011930 | Msa1258890 | 0.825940 | 3.563851e-54 | -8.615850e-47 |
| Msa0011930 | Msa1259640 | 0.805976 | 1.029059e-49 | -8.615850e-47 |
| Msa0011930 | Msa1262010 | 0.807910 | 4.013515e-50 | -8.615850e-47 |
| Msa0011930 | Msa1271130 | 0.813267 | 2.790355e-51 | -8.615850e-47 |
| Msa0011930 | Msa1275590 | 0.820467 | 6.756261e-53 | -8.615850e-47 |
| Msa0011930 | Msa1276970 | 0.829430 | 5.169554e-55 | -8.615850e-47 |
| Msa0011930 | Msa1279140 | -0.821016 | 5.050463e-53 | -8.615850e-47 |
| Msa0011930 | Msa1284900 | 0.829455 | 5.097766e-55 | -8.615850e-47 |
| Msa0011930 | Msa1285550 | 0.800592 | 1.340566e-48 | -8.615850e-47 |
| Msa0011930 | Msa1297170 | 0.811433 | 7.020143e-51 | -8.615850e-47 |
| Msa0011930 | Msa1303270 | 0.812126 | 4.959079e-51 | -8.615850e-47 |
| Msa0011930 | Msa1303280 | 0.806501 | 7.979191e-50 | -8.615850e-47 |
| Msa0011930 | Msa1307600 | 0.819541 | 1.100239e-52 | -8.615850e-47 |
| Msa0011930 | Msa1319820 | 0.828363 | 9.370392e-55 | -8.615850e-47 |
| Msa0011930 | Msa1320820 | 0.817382 | 3.394561e-52 | -8.615850e-47 |
| Msa0011930 | Msa1328640 | 0.816648 | 4.962816e-52 | -8.615850e-47 |
| Msa0011930 | Msa1329050 | -0.838525 | 2.730563e-57 | -8.615850e-47 |
| Msa0011930 | Msa1329790 | 0.811049 | 8.500817e-51 | -8.615850e-47 |
| Msa0011930 | Msa1344310 | 0.800701 | 1.273957e-48 | -8.615850e-47 |
| Msa0011930 | Msa1345810 | 0.821638 | 3.630368e-53 | -8.615850e-47 |
| Msa0011930 | Msa1348090 | 0.805948 | 1.042959e-49 | -8.615850e-47 |
| Msa0011930 | Msa1355450 | 0.824089 | 9.750124e-54 | -8.615850e-47 |
| Msa0011930 | Msa1359560 | 0.804409 | 2.190069e-49 | -8.615850e-47 |
| Msa0011930 | Msa1359920 | 0.815575 | 8.616135e-52 | -8.615850e-47 |
| Msa0011930 | Msa1360980 | 0.808111 | 3.636261e-50 | -8.615850e-47 |
| Msa0011930 | Msa1368430 | 0.818028 | 2.427213e-52 | -8.615850e-47 |
| Msa0011930 | Msa1369690 | 0.824700 | 7.003687e-54 | -8.615850e-47 |
| Msa0011930 | Msa1371520 | 0.833373 | 5.537094e-56 | -8.615850e-47 |
| Msa0011930 | Msa1373820 | 0.812175 | 4.839397e-51 | -8.615850e-47 |
| Msa0011930 | Msa1379590 | 0.810930 | 9.020735e-51 | -8.615850e-47 |
| Msa0011930 | Msa1383230 | 0.811593 | 6.479860e-51 | -8.615850e-47 |
| Msa0011930 | Msa1383530 | 0.802661 | 5.045437e-49 | -8.615850e-47 |
| Msa0011930 | Msa1385890 | 0.809490 | 1.843936e-50 | -8.615850e-47 |
| Msa0011930 | Msa1386710 | 0.809065 | 2.275174e-50 | -8.615850e-47 |
| Msa0011930 | Msa1393820 | 0.812237 | 4.690168e-51 | -8.615850e-47 |
| Msa0011930 | Msa1398090 | 0.802025 | 6.822708e-49 | -8.615850e-47 |
| Msa0011930 | Msa1401270 | 0.808540 | 2.945873e-50 | -8.615850e-47 |
| Msa0011930 | Msa1409950 | 0.817772 | 2.773324e-52 | -8.615850e-47 |
| Msa0011930 | Msa1410420 | 0.824675 | 7.099848e-54 | -8.615850e-47 |
| Msa0011930 | Msa1411950 | 0.806335 | 8.647093e-50 | -8.615850e-47 |
| Msa0011930 | Msa1418240 | 0.852818 | 3.595310e-61 | -8.615850e-47 |
| Msa0011930 | Msa1420250 | 0.814368 | 1.596909e-51 | -8.615850e-47 |
| Msa0011930 | Msa1424350 | 0.822417 | 2.394987e-53 | -8.615850e-47 |
| Msa0011930 | Msa1424640 | 0.810580 | 1.074275e-50 | -8.615850e-47 |
| Msa0011930 | Msa1432480 | 0.802842 | 4.630693e-49 | -8.615850e-47 |
| Msa0011930 | Msa1446780 | 0.800567 | 1.356782e-48 | -8.615850e-47 |
| Msa0011930 | Msa1447180 | 0.800283 | 1.550112e-48 | -8.615850e-47 |
| Msa0011930 | Msa1449860 | 0.809848 | 1.544735e-50 | -8.615850e-47 |
| Msa0011930 | Msa1453360 | 0.825418 | 4.738153e-54 | -8.615850e-47 |
| Msa0011930 | Msa1454450 | 0.810016 | 1.421474e-50 | -8.615850e-47 |
| Msa0011930 | Msa1454530 | 0.824225 | 9.058246e-54 | -8.615850e-47 |
| Msa0011930 | Msa1456230 | 0.817737 | 2.824120e-52 | -8.615850e-47 |
| Msa0011930 | Msa1458340 | 0.822531 | 2.253848e-53 | -8.615850e-47 |
| Msa0011930 | Msa1461540 | 0.807755 | 4.328041e-50 | -8.615850e-47 |
| Msa0011930 | Msa1462660 | 0.807604 | 4.659948e-50 | -8.615850e-47 |
| Msa0011930 | Msa1465570 | 0.837938 | 3.868062e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0011930 | MtrunA17_Chr1g0160501 | 99.422 | 173 | 1 | 0 | 1 | 173 | 1 | 173 | 2.26e-127 | 354 |
| Msa0011930 | MtrunA17_Chr1g0197081 | 59.627 | 161 | 64 | 1 | 1 | 160 | 42 | 202 | 7.16e-71 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0011930 | AT1G30110.2 | 77.714 | 175 | 37 | 1 | 1 | 173 | 1 | 175 | 5.06e-101 | 288 |
| Msa0011930 | AT1G30110.1 | 77.714 | 175 | 37 | 1 | 1 | 173 | 1 | 175 | 5.06e-101 | 288 |
| Msa0011930 | AT3G10620.1 | 57.764 | 161 | 67 | 1 | 1 | 160 | 56 | 216 | 2.00e-68 | 207 |
| Msa0011930 | AT5G06340.1 | 56.250 | 160 | 69 | 1 | 1 | 159 | 55 | 214 | 1.57e-62 | 192 |
Find 77 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCCACTCTGCAAATTC+TGG | 0.093641 | 1_1:+17986397 | None:intergenic |
| CCCGGTTTAGAAAATAAATT+TGG | 0.192294 | 1_1:+17985788 | None:intergenic |
| TTCTCTAATAGCAGCAGATT+TGG | 0.244965 | 1_1:+17987193 | None:intergenic |
| CTCAGTAAGTGAAATGGATT+TGG | 0.268607 | 1_1:+17985904 | None:intergenic |
| AACACTCAACTATTTGTAAA+TGG | 0.270794 | 1_1:-17985872 | Msa0011930:three_prime_UTR |
| CAGAATTTGCAGAGTGGAAA+TGG | 0.298244 | 1_1:-17986396 | Msa0011930:CDS |
| GGCTAAAGTCAATCGTCTTT+GGG | 0.307296 | 1_1:-17986821 | Msa0011930:CDS |
| TTCGCGTACATCTGTGCCTT+TGG | 0.307652 | 1_1:-17986070 | Msa0011930:three_prime_UTR |
| TGTTACTTGTTTGTTATTGT+TGG | 0.316374 | 1_1:+17988341 | None:intergenic |
| CAAAATTGTTCCTTGTACTT+AGG | 0.322157 | 1_1:+17985697 | None:intergenic |
| ACCTGCTCAATAACTTCTTC+AGG | 0.335949 | 1_1:+17986367 | None:intergenic |
| AGGCTAAAGTCAATCGTCTT+TGG | 0.336576 | 1_1:-17986822 | Msa0011930:CDS |
| AGTGAAATTAGATAAGAAAA+TGG | 0.345012 | 1_1:+17986129 | None:intergenic |
| GTTGCATTTCCTTGAAAGTA+AGG | 0.354258 | 1_1:+17986211 | None:intergenic |
| ACCTTCAAGCCTTACTTTCA+AGG | 0.360232 | 1_1:-17986220 | Msa0011930:CDS |
| GTGCATTACAGGTTGATAAA+TGG | 0.375642 | 1_1:-17986873 | Msa0011930:intron |
| TCTCTAATAGCAGCAGATTT+GGG | 0.380677 | 1_1:+17987194 | None:intergenic |
| TCGCGTACATCTGTGCCTTT+GGG | 0.385910 | 1_1:-17986069 | Msa0011930:three_prime_UTR |
| GCTTCCAGATTGAATGTTCC+AGG | 0.385919 | 1_1:-17987381 | Msa0011930:CDS |
| ATTTCCACTCTGCAAATTCT+GGG | 0.388442 | 1_1:+17986398 | None:intergenic |
| GGTTGTTACAACTTCTTCAT+AGG | 0.389048 | 1_1:+17986240 | None:intergenic |
| CTGAAATGACATCATGTTTG+AGG | 0.390357 | 1_1:-17985604 | Msa0011930:three_prime_UTR |
| GGTAGTTAGAACTTTCCATT+AGG | 0.400278 | 1_1:-17985847 | Msa0011930:three_prime_UTR |
| TCCATTTCACTTACTGAGGT+TGG | 0.401653 | 1_1:-17985899 | Msa0011930:three_prime_UTR |
| AGAGAACTTCGAGAAGAAAC+TGG | 0.413791 | 1_1:-17987176 | Msa0011930:CDS |
| TACAAGAAGCAAGTACCTAA+TGG | 0.421481 | 1_1:+17985832 | None:intergenic |
| TCTCATCAATTCAGATGATC+AGG | 0.421614 | 1_1:-17988266 | Msa0011930:intron |
| TCCTTGAAAGTAAGGCTTGA+AGG | 0.425267 | 1_1:+17986219 | None:intergenic |
| TCCAACCTCAGTAAGTGAAA+TGG | 0.425402 | 1_1:+17985898 | None:intergenic |
| TGAGGCATTTGCCATGCTCC+TGG | 0.426678 | 1_1:+17987363 | None:intergenic |
| AAATTCTGGGTCTGCTTCAC+CGG | 0.426680 | 1_1:+17986411 | None:intergenic |
| TTTCAGAGAACATGTTAGAA+TGG | 0.445184 | 1_1:+17985621 | None:intergenic |
| TGCTCCTGGAACATTCAATC+TGG | 0.446702 | 1_1:+17987377 | None:intergenic |
| AGGAGCATGGCAAATGCCTC+AGG | 0.465802 | 1_1:-17987361 | Msa0011930:intron |
| GAAACAAAGATAAAGAGTGT+TGG | 0.480520 | 1_1:+17988398 | None:intergenic |
| GAACATGTTAGAATGGTTGA+TGG | 0.481954 | 1_1:+17985628 | None:intergenic |
| AAAATATCGAGCTTGAAATC+CGG | 0.488170 | 1_1:+17986031 | None:intergenic |
| CCTGCTCAATAACTTCTTCA+GGG | 0.490006 | 1_1:+17986368 | None:intergenic |
| CCCTGAAGAAGTTATTGAGC+AGG | 0.490394 | 1_1:-17986368 | Msa0011930:intron |
| GTGTTGACAGTGCGAACGTA+TGG | 0.490885 | 1_1:-17985946 | Msa0011930:three_prime_UTR |
| ACGCGAATGCTTGAAATTTG+TGG | 0.493230 | 1_1:+17986086 | None:intergenic |
| GGCATGGACAGGCACAGAAA+TGG | 0.494440 | 1_1:-17986789 | Msa0011930:intron |
| AGAATTTGCAGAGTGGAAAT+GGG | 0.503598 | 1_1:-17986395 | Msa0011930:CDS |
| TGGGTCAAAATCAGACAATC+CGG | 0.506184 | 1_1:-17986050 | Msa0011930:three_prime_UTR |
| GTTACAACTTCTTCATAGGT+AGG | 0.511880 | 1_1:+17986244 | None:intergenic |
| GGGAGGAGAATGGCATGGAC+AGG | 0.513397 | 1_1:-17986800 | Msa0011930:CDS |
| ATGAGACAGACACCAACGTT+AGG | 0.524807 | 1_1:+17988283 | None:intergenic |
| ATCGTCTTTGGGGAGGAGAA+TGG | 0.528661 | 1_1:-17986810 | Msa0011930:CDS |
| TTGACTTTAGCCTTCACAGC+AGG | 0.532701 | 1_1:+17986832 | None:intergenic |
| TTGTTTATAACTTAAGTACA+AGG | 0.537609 | 1_1:-17985677 | Msa0011930:three_prime_UTR |
| TGACTTCCCTCCTGCTGTGA+AGG | 0.542301 | 1_1:-17986842 | Msa0011930:CDS |
| CTCAACTATTTGTAAATGGA+TGG | 0.543339 | 1_1:-17985868 | Msa0011930:three_prime_UTR |
| CAAATCCATTTCACTTACTG+AGG | 0.549203 | 1_1:-17985903 | Msa0011930:three_prime_UTR |
| TCACAATCATCCTCGCAGCC+CGG | 0.551358 | 1_1:+17985770 | None:intergenic |
| ACTTTAGCCTTCACAGCAGG+AGG | 0.558265 | 1_1:+17986835 | None:intergenic |
| CAACACAAACACAACACAAG+TGG | 0.567169 | 1_1:+17988454 | None:intergenic |
| GATTGAATGTTCCAGGAGCA+TGG | 0.573208 | 1_1:-17987374 | Msa0011930:CDS |
| TTCTGGGTCTGCTTCACCGG+TGG | 0.576581 | 1_1:+17986414 | None:intergenic |
| GAGGTGTGAATGATGAGTAC+TGG | 0.579208 | 1_1:+17988428 | None:intergenic |
| TTCGCACTGTCAACACGTGT+TGG | 0.590594 | 1_1:+17985953 | None:intergenic |
| AAAGAGTGTTGGAGATGATG+AGG | 0.592928 | 1_1:+17988409 | None:intergenic |
| ATAGTATTGTATTGTGAATG+TGG | 0.598793 | 1_1:+17988492 | None:intergenic |
| TGACTTGATACCTAAGTACA+AGG | 0.602640 | 1_1:-17985707 | Msa0011930:three_prime_UTR |
| GCTAAAGTCAATCGTCTTTG+GGG | 0.604526 | 1_1:-17986820 | Msa0011930:CDS |
| AACAAGTAACAGCTAAGACA+TGG | 0.618371 | 1_1:-17988329 | Msa0011930:exon |
| CGAAATGTAAATCGACAAAG+TGG | 0.620980 | 1_1:-17986183 | Msa0011930:CDS |
| CTTTGGGGAGGAGAATGGCA+TGG | 0.624852 | 1_1:-17986805 | Msa0011930:CDS |
| GACAGACACCAACGTTAGGA+CGG | 0.631134 | 1_1:+17988287 | None:intergenic |
| GGTGAAATCAACTTAGCCAC+CGG | 0.634355 | 1_1:-17986430 | Msa0011930:CDS |
| CTTTAGCCTTCACAGCAGGA+GGG | 0.649727 | 1_1:+17986836 | None:intergenic |
| AAAGTCAATCGTCTTTGGGG+AGG | 0.655166 | 1_1:-17986817 | Msa0011930:CDS |
| ACGTTAGGACGGTAACCTTG+TGG | 0.657862 | 1_1:+17988298 | None:intergenic |
| GTCTGCTGAGATAATCGCTG+AGG | 0.670608 | 1_1:-17987147 | Msa0011930:intron |
| GTATAGATCTGTTGATGTCG+CGG | 0.674346 | 1_1:-17985741 | Msa0011930:three_prime_UTR |
| CAGACCCAGAATTTGCAGAG+TGG | 0.693037 | 1_1:-17986402 | Msa0011930:CDS |
| CAAGGTTACCGTCCTAACGT+TGG | 0.707808 | 1_1:-17988295 | Msa0011930:CDS |
| GACATGGAGAATCTTCCACA+AGG | 0.720171 | 1_1:-17988313 | Msa0011930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAAAAAAAAAGA+TGG | + | chr1_1:17985863-17985882 | None:intergenic | 10.0% |
| !!! | ATTATTTAAGTTATTTGAAT+TGG | + | chr1_1:17986793-17986812 | None:intergenic | 10.0% |
| !!! | ATTAATTGTTTGTAGATTTT+AGG | - | chr1_1:17986059-17986078 | Msa0011930:three_prime_UTR | 15.0% |
| !!! | AATTTTCCATAATTCATTTT+TGG | - | chr1_1:17986103-17986122 | Msa0011930:three_prime_UTR | 15.0% |
| !!! | ATGTTGTAAATTTAACTTAA+AGG | - | chr1_1:17986535-17986554 | Msa0011930:intron | 15.0% |
| !!! | ATATTTTTTCGAGTAAAATT+TGG | - | chr1_1:17987499-17987518 | Msa0011930:intron | 15.0% |
| !! | ATGAAATTAAAAAAAGATGA+CGG | - | chr1_1:17987639-17987658 | Msa0011930:intron | 15.0% |
| !! | TGAAAATTTAGGTAAGAATA+TGG | - | chr1_1:17985906-17985925 | Msa0011930:three_prime_UTR | 20.0% |
| !!! | TGTTGTTTGTAGATATTTTT+TGG | - | chr1_1:17986034-17986053 | Msa0011930:three_prime_UTR | 20.0% |
| !!! | TGAAGTTGATTTATACTTTA+AGG | + | chr1_1:17986229-17986248 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTTCAGATATTTG+TGG | - | chr1_1:17986687-17986706 | Msa0011930:intron | 20.0% |
| !!! | AATTTTTTGACTGTTCTTTT+GGG | - | chr1_1:17986841-17986860 | Msa0011930:CDS | 20.0% |
| !!! | ACAAAAGCATATATTAACAA+TGG | - | chr1_1:17987383-17987402 | Msa0011930:CDS | 20.0% |
| !!! | TCTTTTGTTATTAATAAGCA+TGG | - | chr1_1:17987538-17987557 | Msa0011930:intron | 20.0% |
| !! | ATCAATTACGAACATTTAAT+AGG | - | chr1_1:17987610-17987629 | Msa0011930:intron | 20.0% |
| !! | AGTGAAATTAGATAAGAAAA+TGG | + | chr1_1:17987964-17987983 | None:intergenic | 20.0% |
| !!! | TTTTCTTATCTAATTTCACT+TGG | - | chr1_1:17987964-17987983 | Msa0011930:intron | 20.0% |
| !! | TTGTTTATAACTTAAGTACA+AGG | - | chr1_1:17988413-17988432 | Msa0011930:five_prime_UTR | 20.0% |
| ! | ATAGTATTGTATTGTGAATG+TGG | + | chr1_1:17985601-17985620 | None:intergenic | 25.0% |
| !!! | TAAACTTTTTCTTCTCTCTA+AGG | - | chr1_1:17985720-17985739 | Msa0011930:three_prime_UTR | 25.0% |
| !!! | TGTTACTTGTTTGTTATTGT+TGG | + | chr1_1:17985752-17985771 | None:intergenic | 25.0% |
| !! | AACCTTTTCTGAATCTATTT+TGG | - | chr1_1:17985950-17985969 | Msa0011930:three_prime_UTR | 25.0% |
| ! | AACCAAAATAGATTCAGAAA+AGG | + | chr1_1:17985955-17985974 | None:intergenic | 25.0% |
| !!! | TTCTGAATCTATTTTGGTTT+TGG | - | chr1_1:17985956-17985975 | Msa0011930:three_prime_UTR | 25.0% |
| !!! | TTCCATAATTCATTTTTGGT+TGG | - | chr1_1:17986107-17986126 | Msa0011930:three_prime_UTR | 25.0% |
| ! | AACCAACCAAAAATGAATTA+TGG | + | chr1_1:17986112-17986131 | None:intergenic | 25.0% |
| !!! | TTTGGTTGGTTTTCTATTTT+TGG | - | chr1_1:17986121-17986140 | Msa0011930:three_prime_UTR | 25.0% |
| !!! | TTATATTTTTGTTAACCCTC+TGG | - | chr1_1:17986297-17986316 | Msa0011930:intron | 25.0% |
| !! | TGATTAATGTTTTCCATCAA+AGG | + | chr1_1:17986423-17986442 | None:intergenic | 25.0% |
| !!! | TTAAAGCAAAGTGTTTTTCT+TGG | - | chr1_1:17986478-17986497 | Msa0011930:intron | 25.0% |
| ! | TACACTGTTATAGCATATAT+AGG | + | chr1_1:17986584-17986603 | None:intergenic | 25.0% |
| !!! | CAATTTTTTGACTGTTCTTT+TGG | - | chr1_1:17986840-17986859 | Msa0011930:CDS | 25.0% |
| !!! | ATTTTTTGACTGTTCTTTTG+GGG | - | chr1_1:17986842-17986861 | Msa0011930:CDS | 25.0% |
| ! | AACTAAATGCAGAAAAGAAA+AGG | + | chr1_1:17986980-17986999 | None:intergenic | 25.0% |
| ! | AAGAGAAACATTTAAGAATG+TGG | + | chr1_1:17987361-17987380 | None:intergenic | 25.0% |
| !!! | TTTGTTATTAATAAGCATGG+TGG | - | chr1_1:17987541-17987560 | Msa0011930:intron | 25.0% |
| ! | ACAAAGTCAGTATTTCTTAT+TGG | - | chr1_1:17987575-17987594 | Msa0011930:intron | 25.0% |
| !! | GAAAAATACATACTTGTTAC+AGG | + | chr1_1:17987766-17987785 | None:intergenic | 25.0% |
| ! | TGTTTGAAAAACTAATCACT+CGG | - | chr1_1:17987788-17987807 | Msa0011930:intron | 25.0% |
| ! | AACACTCAACTATTTGTAAA+TGG | - | chr1_1:17988218-17988237 | Msa0011930:intron | 25.0% |
| !!! | GCCAAATTTATTTTCTAAAC+CGG | - | chr1_1:17988301-17988320 | Msa0011930:CDS | 25.0% |
| !!! | CCAAATTTATTTTCTAAACC+GGG | - | chr1_1:17988302-17988321 | Msa0011930:CDS | 25.0% |
| ! | GAAACAAAGATAAAGAGTGT+TGG | + | chr1_1:17985695-17985714 | None:intergenic | 30.0% |
| GAATATGGTGTCTTAATCTA+AGG | - | chr1_1:17985921-17985940 | Msa0011930:three_prime_UTR | 30.0% | |
| ! | ATTTTAGGCTCTACTAAAGA+TGG | - | chr1_1:17986074-17986093 | Msa0011930:three_prime_UTR | 30.0% |
| !! | GTTGATTTATACTTTAAGGC+TGG | + | chr1_1:17986225-17986244 | None:intergenic | 30.0% |
| AATTTCTGTGGAACAATTCT+TGG | + | chr1_1:17986374-17986393 | None:intergenic | 30.0% | |
| CAATCTAGATTCAATTTCTG+TGG | + | chr1_1:17986386-17986405 | None:intergenic | 30.0% | |
| TGGCTAGATTTGGAAAATTT+AGG | - | chr1_1:17986498-17986517 | Msa0011930:intron | 30.0% | |
| ATATGCTATAACAGTGTACT+AGG | - | chr1_1:17986586-17986605 | Msa0011930:intron | 30.0% | |
| GTATACTAGTACATAATGTG+AGG | + | chr1_1:17986758-17986777 | None:intergenic | 30.0% | |
| AGAACAGTCAAAAAATTGCT+CGG | + | chr1_1:17986838-17986857 | None:intergenic | 30.0% | |
| !! | AGAAATACTGACTTTGTTAG+CGG | + | chr1_1:17987572-17987591 | None:intergenic | 30.0% |
| AAAATATCGAGCTTGAAATC+CGG | + | chr1_1:17988062-17988081 | None:intergenic | 30.0% | |
| CTCAACTATTTGTAAATGGA+TGG | - | chr1_1:17988222-17988241 | Msa0011930:intron | 30.0% | |
| CCCGGTTTAGAAAATAAATT+TGG | + | chr1_1:17988305-17988324 | None:intergenic | 30.0% | |
| CAAAATTGTTCCTTGTACTT+AGG | + | chr1_1:17988396-17988415 | None:intergenic | 30.0% | |
| TTTCAGAGAACATGTTAGAA+TGG | + | chr1_1:17988472-17988491 | None:intergenic | 30.0% | |
| AACAAGTAACAGCTAAGACA+TGG | - | chr1_1:17985761-17985780 | Msa0011930:three_prime_UTR | 35.0% | |
| TCTCATCAATTCAGATGATC+AGG | - | chr1_1:17985824-17985843 | Msa0011930:three_prime_UTR | 35.0% | |
| ! | GTGTTTTTCTTGGCTAGATT+TGG | - | chr1_1:17986488-17986507 | Msa0011930:intron | 35.0% |
| ! | TAATTTGTATGACTACGACG+AGG | - | chr1_1:17986643-17986662 | Msa0011930:intron | 35.0% |
| !!! | ACTGTTCTTTTGGGGTTTTT+AGG | - | chr1_1:17986850-17986869 | Msa0011930:CDS | 35.0% |
| !!! | CTGTTCTTTTGGGGTTTTTA+GGG | - | chr1_1:17986851-17986870 | Msa0011930:CDS | 35.0% |
| !!! | TTTTAGGGAGGTATTGAAGA+TGG | - | chr1_1:17986866-17986885 | Msa0011930:intron | 35.0% |
| TCTCTAATAGCAGCAGATTT+GGG | + | chr1_1:17986899-17986918 | None:intergenic | 35.0% | |
| TTCTCTAATAGCAGCAGATT+TGG | + | chr1_1:17986900-17986919 | None:intergenic | 35.0% | |
| ATCAATACTCCATAGAGCAT+CGG | + | chr1_1:17987041-17987060 | None:intergenic | 35.0% | |
| !! | GTGCATTACAGGTTGATAAA+TGG | - | chr1_1:17987217-17987236 | Msa0011930:CDS | 35.0% |
| TGCATCAATGAAAGCGATAT+AGG | - | chr1_1:17987431-17987450 | Msa0011930:intron | 35.0% | |
| CGAAAAAATATCACGAGACA+AGG | + | chr1_1:17987490-17987509 | None:intergenic | 35.0% | |
| ATTTCCACTCTGCAAATTCT+GGG | + | chr1_1:17987695-17987714 | None:intergenic | 35.0% | |
| AGAATTTGCAGAGTGGAAAT+GGG | - | chr1_1:17987695-17987714 | Msa0011930:intron | 35.0% | |
| TAATAATCGATTACAGGCAG+TGG | - | chr1_1:17987812-17987831 | Msa0011930:intron | 35.0% | |
| GTTACAACTTCTTCATAGGT+AGG | + | chr1_1:17987849-17987868 | None:intergenic | 35.0% | |
| GGTTGTTACAACTTCTTCAT+AGG | + | chr1_1:17987853-17987872 | None:intergenic | 35.0% | |
| GTTGCATTTCCTTGAAAGTA+AGG | + | chr1_1:17987882-17987901 | None:intergenic | 35.0% | |
| CGAAATGTAAATCGACAAAG+TGG | - | chr1_1:17987907-17987926 | Msa0011930:intron | 35.0% | |
| !! | ATTGTCTGATTTTGACCCAA+AGG | + | chr1_1:17988039-17988058 | None:intergenic | 35.0% |
| ! | CTCAGTAAGTGAAATGGATT+TGG | + | chr1_1:17988189-17988208 | None:intergenic | 35.0% |
| CAAATCCATTTCACTTACTG+AGG | - | chr1_1:17988187-17988206 | Msa0011930:intron | 35.0% | |
| GGTAGTTAGAACTTTCCATT+AGG | - | chr1_1:17988243-17988262 | Msa0011930:intron | 35.0% | |
| TACAAGAAGCAAGTACCTAA+TGG | + | chr1_1:17988261-17988280 | None:intergenic | 35.0% | |
| TGACTTGATACCTAAGTACA+AGG | - | chr1_1:17988383-17988402 | Msa0011930:five_prime_UTR | 35.0% | |
| GAACATGTTAGAATGGTTGA+TGG | + | chr1_1:17988465-17988484 | None:intergenic | 35.0% | |
| CTGAAATGACATCATGTTTG+AGG | - | chr1_1:17988486-17988505 | Msa0011930:five_prime_UTR | 35.0% | |
| CAACACAAACACAACACAAG+TGG | + | chr1_1:17985639-17985658 | None:intergenic | 40.0% | |
| !! | AAAGAGTGTTGGAGATGATG+AGG | + | chr1_1:17985684-17985703 | None:intergenic | 40.0% |
| TCCATCAAAGGACAATCGTT+CGG | + | chr1_1:17986411-17986430 | None:intergenic | 40.0% | |
| TAACCGCAAACCAAGTGATT+GGG | + | chr1_1:17986452-17986471 | None:intergenic | 40.0% | |
| ATAACCGCAAACCAAGTGAT+TGG | + | chr1_1:17986453-17986472 | None:intergenic | 40.0% | |
| CAGTGTACTAGGAATTAGAG+AGG | - | chr1_1:17986597-17986616 | Msa0011930:intron | 40.0% | |
| !!! | TTCTTTTGGGGTTTTTAGGG+AGG | - | chr1_1:17986854-17986873 | Msa0011930:CDS | 40.0% |
| AGAGAACTTCGAGAAGAAAC+TGG | - | chr1_1:17986914-17986933 | Msa0011930:intron | 40.0% | |
| ATTTCTCTGCGATAACTCTG+TGG | - | chr1_1:17987162-17987181 | Msa0011930:CDS | 40.0% | |
| TGACAGTGTTTGTGCATTAC+AGG | - | chr1_1:17987206-17987225 | Msa0011930:CDS | 40.0% | |
| AGGCTAAAGTCAATCGTCTT+TGG | - | chr1_1:17987268-17987287 | Msa0011930:intron | 40.0% | |
| GGCTAAAGTCAATCGTCTTT+GGG | - | chr1_1:17987269-17987288 | Msa0011930:intron | 40.0% | |
| GCTAAAGTCAATCGTCTTTG+GGG | - | chr1_1:17987270-17987289 | Msa0011930:intron | 40.0% | |
| CATTTCCACTCTGCAAATTC+TGG | + | chr1_1:17987696-17987715 | None:intergenic | 40.0% | |
| CAGAATTTGCAGAGTGGAAA+TGG | - | chr1_1:17987694-17987713 | Msa0011930:intron | 40.0% | |
| CCTGCTCAATAACTTCTTCA+GGG | + | chr1_1:17987725-17987744 | None:intergenic | 40.0% | |
| ACCTGCTCAATAACTTCTTC+AGG | + | chr1_1:17987726-17987745 | None:intergenic | 40.0% | |
| CTCGGCTAATAATCGATTAC+AGG | - | chr1_1:17987806-17987825 | Msa0011930:intron | 40.0% | |
| ACCTTCAAGCCTTACTTTCA+AGG | - | chr1_1:17987870-17987889 | Msa0011930:intron | 40.0% | |
| TCCTTGAAAGTAAGGCTTGA+AGG | + | chr1_1:17987874-17987893 | None:intergenic | 40.0% | |
| ACGCGAATGCTTGAAATTTG+TGG | + | chr1_1:17988007-17988026 | None:intergenic | 40.0% | |
| TGGGTCAAAATCAGACAATC+CGG | - | chr1_1:17988040-17988059 | Msa0011930:intron | 40.0% | |
| TCCATTTCACTTACTGAGGT+TGG | - | chr1_1:17988191-17988210 | Msa0011930:intron | 40.0% | |
| TCCAACCTCAGTAAGTGAAA+TGG | + | chr1_1:17988195-17988214 | None:intergenic | 40.0% | |
| GTATAGATCTGTTGATGTCG+CGG | - | chr1_1:17988349-17988368 | Msa0011930:five_prime_UTR | 40.0% | |
| GAGGTGTGAATGATGAGTAC+TGG | + | chr1_1:17985665-17985684 | None:intergenic | 45.0% | |
| GACATGGAGAATCTTCCACA+AGG | - | chr1_1:17985777-17985796 | Msa0011930:three_prime_UTR | 45.0% | |
| ATGAGACAGACACCAACGTT+AGG | + | chr1_1:17985810-17985829 | None:intergenic | 45.0% | |
| ! | TTGTTAACCCTCTGGTTCAG+TGG | - | chr1_1:17986305-17986324 | Msa0011930:intron | 45.0% |
| GGAAGGACCTGATAATTCGT+CGG | - | chr1_1:17986326-17986345 | Msa0011930:intron | 45.0% | |
| TTCACGACCGACGAATTATC+AGG | + | chr1_1:17986336-17986355 | None:intergenic | 45.0% | |
| TTGTATGACTACGACGAGGA+AGG | - | chr1_1:17986647-17986666 | Msa0011930:intron | 45.0% | |
| TGTATGACTACGACGAGGAA+GGG | - | chr1_1:17986648-17986667 | Msa0011930:intron | 45.0% | |
| GCTTCCAGATTGAATGTTCC+AGG | - | chr1_1:17986709-17986728 | Msa0011930:intron | 45.0% | |
| TGCTCCTGGAACATTCAATC+TGG | + | chr1_1:17986716-17986735 | None:intergenic | 45.0% | |
| GATTGAATGTTCCAGGAGCA+TGG | - | chr1_1:17986716-17986735 | Msa0011930:intron | 45.0% | |
| ACATAATGTGAGGTCACCTG+AGG | + | chr1_1:17986748-17986767 | None:intergenic | 45.0% | |
| ! | TTGACTTTAGCCTTCACAGC+AGG | + | chr1_1:17987261-17987280 | None:intergenic | 45.0% |
| ! | AAAGTCAATCGTCTTTGGGG+AGG | - | chr1_1:17987273-17987292 | Msa0011930:intron | 45.0% |
| CATTTACTCCATGCACACTC+AGG | + | chr1_1:17987460-17987479 | None:intergenic | 45.0% | |
| CTGAGTGTGCATGGAGTAAA+TGG | - | chr1_1:17987458-17987477 | Msa0011930:intron | 45.0% | |
| GGTGAAATCAACTTAGCCAC+CGG | - | chr1_1:17987660-17987679 | Msa0011930:intron | 45.0% | |
| AAATTCTGGGTCTGCTTCAC+CGG | + | chr1_1:17987682-17987701 | None:intergenic | 45.0% | |
| CCCTGAAGAAGTTATTGAGC+AGG | - | chr1_1:17987722-17987741 | Msa0011930:intron | 45.0% | |
| !!! | TTTTTTATTAATGAAAATTT+AGG | - | chr1_1:17985895-17985914 | Msa0011930:three_prime_UTR | 5.0% |
| ACGTTAGGACGGTAACCTTG+TGG | + | chr1_1:17985795-17985814 | None:intergenic | 50.0% | |
| CAAGGTTACCGTCCTAACGT+TGG | - | chr1_1:17985795-17985814 | Msa0011930:three_prime_UTR | 50.0% | |
| GACAGACACCAACGTTAGGA+CGG | + | chr1_1:17985806-17985825 | None:intergenic | 50.0% | |
| ! | TAACCCTCTGGTTCAGTGGA+AGG | - | chr1_1:17986309-17986328 | Msa0011930:intron | 50.0% |
| GCCGAACGATTGTCCTTTGA+TGG | - | chr1_1:17986407-17986426 | Msa0011930:CDS | 50.0% | |
| ATCACCTGAGCCCAATCACT+TGG | - | chr1_1:17986439-17986458 | Msa0011930:CDS | 50.0% | |
| CAAACCAAGTGATTGGGCTC+AGG | + | chr1_1:17986446-17986465 | None:intergenic | 50.0% | |
| ! | GAGCCCAATCACTTGGTTTG+CGG | - | chr1_1:17986446-17986465 | Msa0011930:CDS | 50.0% |
| ACGACGAGGAAGGGAAATCA+TGG | - | chr1_1:17986657-17986676 | Msa0011930:intron | 50.0% | |
| GTCTGCTGAGATAATCGCTG+AGG | - | chr1_1:17986943-17986962 | Msa0011930:intron | 50.0% | |
| TACGTCTAGCCGATGCTCTA+TGG | - | chr1_1:17987029-17987048 | Msa0011930:intron | 50.0% | |
| ! | CTTTAGCCTTCACAGCAGGA+GGG | + | chr1_1:17987257-17987276 | None:intergenic | 50.0% |
| ! | ACTTTAGCCTTCACAGCAGG+AGG | + | chr1_1:17987258-17987277 | None:intergenic | 50.0% |
| ! | ATCGTCTTTGGGGAGGAGAA+TGG | - | chr1_1:17987280-17987299 | Msa0011930:intron | 50.0% |
| ATAGGAAGCCTGAGTGTGCA+TGG | - | chr1_1:17987449-17987468 | Msa0011930:intron | 50.0% | |
| CAGACCCAGAATTTGCAGAG+TGG | - | chr1_1:17987688-17987707 | Msa0011930:intron | 50.0% | |
| TTCGCGTACATCTGTGCCTT+TGG | - | chr1_1:17988020-17988039 | Msa0011930:intron | 50.0% | |
| TCGCGTACATCTGTGCCTTT+GGG | - | chr1_1:17988021-17988040 | Msa0011930:intron | 50.0% | |
| TTCGCACTGTCAACACGTGT+TGG | + | chr1_1:17988140-17988159 | None:intergenic | 50.0% | |
| ! | GTGTTGACAGTGCGAACGTA+TGG | - | chr1_1:17988144-17988163 | Msa0011930:intron | 50.0% |
| ! | ATTTTCTAAACCGGGCTGCG+AGG | - | chr1_1:17988310-17988329 | Msa0011930:CDS | 50.0% |
| GGTCCTTCCACTGAACCAGA+GGG | + | chr1_1:17986315-17986334 | None:intergenic | 55.0% | |
| AGGTCCTTCCACTGAACCAG+AGG | + | chr1_1:17986316-17986335 | None:intergenic | 55.0% | |
| ! | TGAGGCATTTGCCATGCTCC+TGG | + | chr1_1:17986730-17986749 | None:intergenic | 55.0% |
| ! | AGGAGCATGGCAAATGCCTC+AGG | - | chr1_1:17986729-17986748 | Msa0011930:intron | 55.0% |
| TGACTTCCCTCCTGCTGTGA+AGG | - | chr1_1:17987248-17987267 | Msa0011930:intron | 55.0% | |
| ! | CTTTGGGGAGGAGAATGGCA+TGG | - | chr1_1:17987285-17987304 | Msa0011930:intron | 55.0% |
| GGCATGGACAGGCACAGAAA+TGG | - | chr1_1:17987301-17987320 | Msa0011930:intron | 55.0% | |
| TCACAATCATCCTCGCAGCC+CGG | + | chr1_1:17988323-17988342 | None:intergenic | 55.0% | |
| GGGAGGAGAATGGCATGGAC+AGG | - | chr1_1:17987290-17987309 | Msa0011930:intron | 60.0% | |
| TTCTGGGTCTGCTTCACCGG+TGG | + | chr1_1:17987679-17987698 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 17985597 | 17988515 | 17985597 | ID=Msa0011930;Name=Msa0011930 |
| chr1_1 | mRNA | 17985597 | 17988515 | 17985597 | ID=Msa0011930-mRNA-1;Parent=Msa0011930;Name=Msa0011930-mRNA-1;_AED=0.14;_eAED=0.14;_QI=183|1|1|1|1|1|6|583|173 |
| chr1_1 | exon | 17985597 | 17986284 | 17985597 | ID=Msa0011930-mRNA-1:exon:6538;Parent=Msa0011930-mRNA-1 |
| chr1_1 | exon | 17986369 | 17986480 | 17986369 | ID=Msa0011930-mRNA-1:exon:6537;Parent=Msa0011930-mRNA-1 |
| chr1_1 | exon | 17986790 | 17986884 | 17986790 | ID=Msa0011930-mRNA-1:exon:6536;Parent=Msa0011930-mRNA-1 |
| chr1_1 | exon | 17987148 | 17987240 | 17987148 | ID=Msa0011930-mRNA-1:exon:6535;Parent=Msa0011930-mRNA-1 |
| chr1_1 | exon | 17987362 | 17987412 | 17987362 | ID=Msa0011930-mRNA-1:exon:6534;Parent=Msa0011930-mRNA-1 |
| chr1_1 | exon | 17988267 | 17988515 | 17988267 | ID=Msa0011930-mRNA-1:exon:6533;Parent=Msa0011930-mRNA-1 |
| chr1_1 | five_prime_UTR | 17988333 | 17988515 | 17988333 | ID=Msa0011930-mRNA-1:five_prime_utr;Parent=Msa0011930-mRNA-1 |
| chr1_1 | CDS | 17988267 | 17988332 | 17988267 | ID=Msa0011930-mRNA-1:cds;Parent=Msa0011930-mRNA-1 |
| chr1_1 | CDS | 17987362 | 17987412 | 17987362 | ID=Msa0011930-mRNA-1:cds;Parent=Msa0011930-mRNA-1 |
| chr1_1 | CDS | 17987148 | 17987240 | 17987148 | ID=Msa0011930-mRNA-1:cds;Parent=Msa0011930-mRNA-1 |
| chr1_1 | CDS | 17986790 | 17986884 | 17986790 | ID=Msa0011930-mRNA-1:cds;Parent=Msa0011930-mRNA-1 |
| chr1_1 | CDS | 17986369 | 17986480 | 17986369 | ID=Msa0011930-mRNA-1:cds;Parent=Msa0011930-mRNA-1 |
| chr1_1 | CDS | 17986180 | 17986284 | 17986180 | ID=Msa0011930-mRNA-1:cds;Parent=Msa0011930-mRNA-1 |
| chr1_1 | three_prime_UTR | 17985597 | 17986179 | 17985597 | ID=Msa0011930-mRNA-1:three_prime_utr;Parent=Msa0011930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
