AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1111430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111430 MtrunA17_Chr7g0246371 92.529 696 22 4 1 695 1 667 0.0 1315
Msa1111430 MtrunA17_Chr8g0351091 82.867 607 101 2 89 692 6 612 0.0 1059
Msa1111430 MtrunA17_Chr3g0138381 59.638 607 229 4 100 690 57 663 0.0 736
Msa1111430 MtrunA17_Chr2g0290961 59.766 512 201 3 180 691 160 666 0.0 655
Msa1111430 MtrunA17_Chr8g0383241 58.333 468 190 1 225 692 29 491 0.0 597
Msa1111430 MtrunA17_Chr2g0283461 48.069 466 233 5 231 690 70 532 6.82e-162 476
Msa1111430 MtrunA17_Chr7g0235161 57.843 408 166 4 285 688 151 556 2.46e-158 468
Msa1111430 MtrunA17_Chr4g0061711 46.869 495 244 7 206 691 51 535 1.10e-157 466
Msa1111430 MtrunA17_Chr2g0308241 47.312 465 237 5 231 690 73 534 3.20e-156 462
Msa1111430 MtrunA17_Chr7g0260711 46.970 462 217 3 232 690 216 652 4.13e-152 456
Msa1111430 MtrunA17_Chr6g0456071 48.408 471 223 8 240 691 85 554 2.37e-147 440
Msa1111430 MtrunA17_Chr1g0184751 43.497 469 233 7 227 690 156 597 7.95e-134 407
Msa1111430 MtrunA17_Chr2g0277591 42.918 466 233 6 231 690 70 508 8.48e-134 404
Msa1111430 MtrunA17_Chr7g0218571 42.727 440 216 8 277 692 110 537 8.02e-121 371
Msa1111430 MtrunA17_Chr2g0319311 41.346 416 225 5 294 690 124 539 1.17e-113 353
Msa1111430 MtrunA17_Chr6g0454101 44.365 417 213 5 295 692 116 532 4.23e-112 348
Msa1111430 MtrunA17_Chr4g0076011 40.201 398 210 5 321 690 74 471 1.75e-101 319
Msa1111430 MtrunA17_Chr3g0097091 38.322 441 238 11 271 690 101 528 7.88e-95 303
Msa1111430 MtrunA17_Chr7g0245621 34.440 482 286 6 218 690 183 643 4.22e-83 276
Msa1111430 MtrunA17_Chr4g0076331 57.286 199 55 3 495 690 1 172 3.14e-67 218
Msa1111430 MtrunA17_Chr6g0451981 24.776 335 201 12 369 682 64 368 6.86e-21 95.1
Msa1111430 MtrunA17_Chr7g0269751 29.231 195 130 4 496 682 159 353 6.71e-20 92.0
Msa1111430 MtrunA17_Chr4g0066331 26.482 253 151 7 447 665 69 320 9.56e-20 91.3
Msa1111430 MtrunA17_Chr7g0259321 29.714 175 118 3 496 665 151 325 1.16e-19 91.3
Msa1111430 MtrunA17_Chr3g0127611 29.648 199 124 5 496 682 140 334 1.69e-19 90.5
Msa1111430 MtrunA17_Chr3g0141321 26.768 198 136 5 496 684 139 336 1.26e-17 85.1
Msa1111430 MtrunA17_Chr5g0414981 24.242 330 203 12 366 680 76 373 3.61e-17 84.7
Msa1111430 MtrunA17_Chr8g0373671 27.461 193 129 5 496 677 142 334 6.07e-17 82.8
Msa1111430 MtrunA17_Chr1g0154521 28.141 199 133 5 496 684 165 363 8.05e-17 82.8
Msa1111430 MtrunA17_Chr5g0403501 27.778 198 134 5 496 684 166 363 3.60e-15 77.8
Msa1111430 MtrunA17_Chr1g0196511 29.143 175 119 3 496 665 154 328 5.40e-14 73.9
Msa1111430 MtrunA17_Chr4g0076341 41.463 82 43 1 233 314 16 92 4.25e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111430 AT3G61130.1 70.145 690 170 7 7 692 16 673 0.0 991
Msa1111430 AT4G38270.1 63.019 530 190 2 169 692 151 680 0.0 725
Msa1111430 AT4G38270.2 63.019 530 190 2 169 692 147 676 0.0 725
Msa1111430 AT2G46480.3 60.417 528 202 4 168 692 17 540 0.0 671
Msa1111430 AT2G46480.4 60.189 530 204 4 166 692 28 553 0.0 671
Msa1111430 AT5G47780.1 64.052 459 163 1 233 691 159 615 0.0 649
Msa1111430 AT2G46480.2 57.008 528 195 5 168 692 17 515 0.0 616
Msa1111430 AT2G46480.1 57.008 528 195 5 168 692 30 528 0.0 615
Msa1111430 AT3G25140.1 55.658 433 179 6 270 691 128 558 4.35e-168 494
Msa1111430 AT1G18580.1 48.614 469 229 4 228 688 70 534 1.45e-163 481
Msa1111430 AT2G20810.1 47.957 465 231 7 234 690 74 535 5.23e-151 449
Msa1111430 AT3G02350.1 52.535 434 198 5 262 688 125 557 1.80e-149 446
Msa1111430 AT2G30575.1 44.181 464 232 3 232 692 171 610 1.44e-142 430
Msa1111430 AT1G06780.1 44.156 462 232 2 232 690 149 587 3.36e-139 421
Msa1111430 AT1G06780.2 44.156 462 232 2 232 690 162 600 4.35e-139 421
Msa1111430 AT3G01040.2 45.215 418 210 5 294 692 115 532 9.13e-119 366
Msa1111430 AT3G01040.3 45.215 418 210 5 294 692 115 532 9.13e-119 366
Msa1111430 AT5G15470.1 45.564 417 208 5 295 692 116 532 1.64e-117 363
Msa1111430 AT5G54690.1 38.753 449 244 7 261 690 96 532 2.54e-110 344
Msa1111430 AT3G01040.1 42.344 418 189 6 294 692 115 499 5.25e-103 324
Msa1111430 AT2G38650.2 36.402 478 277 7 218 690 162 617 5.64e-98 315
Msa1111430 AT2G38650.1 36.402 478 277 7 218 690 162 617 5.64e-98 315
Msa1111430 AT3G58790.1 36.580 462 256 11 259 690 84 538 1.20e-88 288
Msa1111430 AT3G58790.2 38.366 404 223 8 309 690 7 406 3.72e-88 282
Msa1111430 AT2G38650.3 37.143 385 216 6 218 598 162 524 8.60e-76 253
Msa1111430 AT3G06260.1 30.857 175 116 3 496 665 150 324 3.83e-21 95.9
Msa1111430 AT4G02130.3 28.205 195 132 4 496 682 150 344 2.20e-20 93.6
Msa1111430 AT4G02130.1 28.205 195 132 4 496 682 150 344 2.20e-20 93.6
Msa1111430 AT4G02130.2 28.205 195 132 4 496 682 150 344 2.20e-20 93.6
Msa1111430 AT1G70090.1 28.571 196 131 5 496 682 169 364 3.75e-19 90.5
Msa1111430 AT1G70090.2 28.571 196 131 5 496 682 169 364 3.75e-19 90.5
Msa1111430 AT3G62660.1 27.179 195 134 4 496 682 164 358 7.17e-19 89.4
Msa1111430 AT1G02720.1 28.718 195 131 4 496 682 165 359 9.71e-19 89.0
Msa1111430 AT1G02720.2 28.718 195 131 4 496 682 165 359 9.71e-19 89.0
Msa1111430 AT3G28340.1 28.351 194 129 6 494 677 153 346 1.86e-18 88.2
Msa1111430 AT1G19300.1 27.778 198 134 5 496 684 150 347 1.91e-17 85.1
Msa1111430 AT1G24170.1 23.913 322 192 10 379 682 81 367 1.74e-16 82.4
Msa1111430 AT3G50760.1 26.396 197 136 4 494 681 134 330 4.72e-15 77.4
Msa1111430 AT1G13250.1 27.225 191 134 3 496 681 144 334 6.43e-13 71.2

Find 179 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCTTGTGCTTGCCTCTTT+TGG 0.128192 7_3:+57135112 None:intergenic
GTTACTGATAAACTAAATTT+TGG 0.147550 7_3:-57133281 Msa1111430:CDS
TCTTGTCTAAGATGTGTTTC+TGG 0.168293 7_3:+57134779 None:intergenic
GTTCCCTATGACTGAGAATT+TGG 0.196098 7_3:-57133614 Msa1111430:CDS
TCCACAAGTTTATCCGAAAT+TGG 0.201752 7_3:-57133021 Msa1111430:CDS
GAAATAATCTTTCTGCTTCT+TGG 0.205764 7_3:-57134948 Msa1111430:CDS
GACAGGGTACTATGGAAATT+AGG 0.250416 7_3:-57132392 Msa1111430:CDS
TAAGCCGTGTTTGCAGTTCT+TGG 0.267033 7_3:+57134013 None:intergenic
TTGAGATTGCCAGGTTAAAA+AGG 0.272840 7_3:+57132047 None:intergenic
TATGACTGCAAGTTGGTTAT+TGG 0.275774 7_3:-57133802 Msa1111430:CDS
ATATCACAGGTGGCAGAATT+TGG 0.278377 7_3:-57132748 Msa1111430:intron
AGAAGGATTTGACTGGATTA+TGG 0.290586 7_3:-57132962 Msa1111430:CDS
ACCCTTCTGGCTAGCCTTAC+GGG 0.301649 7_3:+57134621 None:intergenic
AAAAGAATCTTATCCAATTT+CGG 0.301889 7_3:+57133008 None:intergenic
AAAGAGAGTCAGCGTGCTTT+AGG 0.304821 7_3:-57133991 Msa1111430:CDS
ATGGTTATACTTGACATATT+TGG 0.307908 7_3:+57132178 None:intergenic
CTGCTTCTTGGAGAGTTGTT+GGG 0.314790 7_3:-57134936 Msa1111430:CDS
GAGAAGGAAGGAAGATCTTC+AGG 0.324973 7_3:-57134746 Msa1111430:intron
CCAGGGCTAATGACATTCTA+TGG 0.326202 7_3:-57132359 Msa1111430:CDS
TCAGTTGATTCAGCAGTTCT+AGG 0.328896 7_3:-57134168 Msa1111430:CDS
TCTGCTTCTTGGAGAGTTGT+TGG 0.331359 7_3:-57134937 Msa1111430:CDS
CACCCTTCTGGCTAGCCTTA+CGG 0.339727 7_3:+57134620 None:intergenic
CCTATTCTCAGACAATGTTT+TGG 0.343893 7_3:-57133566 Msa1111430:CDS
TGACAAAGTATCGTCCTTAC+TGG 0.346721 7_3:-57132202 Msa1111430:CDS
CAAAACATTGTCTGAGAATA+GGG 0.349585 7_3:+57133567 None:intergenic
AATGGGCCAAGTTCTTTCTA+AGG 0.354321 7_3:-57133839 Msa1111430:CDS
TCATGGCATGTACTCGGTTT+GGG 0.356589 7_3:-57132314 Msa1111430:CDS
ATCATGGCATGTACTCGGTT+TGG 0.363039 7_3:-57132315 Msa1111430:CDS
TGCCTTCTGTTCTCTCCATT+TGG 0.363246 7_3:+57135159 None:intergenic
TATGTCCAGCACGAATGATA+TGG 0.364399 7_3:-57134995 Msa1111430:CDS
TCAGAAGTAGCTTTCTTGTA+TGG 0.364711 7_3:-57131758 Msa1111430:three_prime_UTR
AAGAAGCAGAAAGATTATTT+CGG 0.364907 7_3:+57134950 None:intergenic
AGTATAACCATCCTTATCTT+AGG 0.371790 7_3:-57132166 Msa1111430:CDS
CTTGTCTAAGATGTGTTTCT+GGG 0.373678 7_3:+57134780 None:intergenic
TTAACCAAATTCTCAGTCAT+AGG 0.376964 7_3:+57133610 None:intergenic
CCAAAACATTGTCTGAGAAT+AGG 0.379751 7_3:+57133566 None:intergenic
TGTTCTTTGTACTTAGGAAT+TGG 0.386136 7_3:+57132111 None:intergenic
TTCTAGGTAAATACAACCTT+TGG 0.386455 7_3:-57134152 Msa1111430:CDS
CTTTCGCCTTAGAAAGAACT+TGG 0.387580 7_3:+57133833 None:intergenic
AGTTGGTTATTGGGAAAGTA+AGG 0.391814 7_3:-57133792 Msa1111430:CDS
ATGACTGCAAGTTGGTTATT+GGG 0.393638 7_3:-57133801 Msa1111430:CDS
AAAGAGTGTTCTTTGTACTT+AGG 0.396075 7_3:+57132105 None:intergenic
AAGAATGATGCTCACCCTTC+TGG 0.396798 7_3:+57134608 None:intergenic
ACAGGGTACTATGGAAATTA+GGG 0.397082 7_3:-57132391 Msa1111430:CDS
AATGAACATGTTTGATTTGA+AGG 0.399962 7_3:-57132799 Msa1111430:CDS
GTCATTGCTATCTCTAACCA+TGG 0.402027 7_3:+57132221 None:intergenic
GCAGCAGTTGTACACTATAA+TGG 0.404766 7_3:-57132254 Msa1111430:CDS
ACTGCTGATGAGCAGGTTAG+AGG 0.405243 7_3:-57133757 Msa1111430:CDS
GGCTGCTGAGTTGGTACAAC+AGG 0.408103 7_3:-57134241 Msa1111430:CDS
AATGAAAGAGTATTATTTCA+AGG 0.412072 7_3:-57133132 Msa1111430:CDS
AGGCTGGGGTATGTATATTC+TGG 0.412941 7_3:+57132077 None:intergenic
TTGAGCATTGAAAGATACTT+TGG 0.416508 7_3:+57133062 None:intergenic
AGAATGAAGACAGGGTACTA+TGG 0.423957 7_3:-57132400 Msa1111430:CDS
TTCAGCGTTAATCATGGAAT+CGG 0.429604 7_3:-57137145 Msa1111430:five_prime_UTR
TGCACTTTCAGCGTTAATCA+TGG 0.432330 7_3:-57137151 Msa1111430:five_prime_UTR
ATAATCCAGTCAAATCCTTC+TGG 0.433499 7_3:+57132964 None:intergenic
GACTTCAAACGCAACAAATC+AGG 0.442440 7_3:-57134908 Msa1111430:intron
AGCTTACAGTTCCTAAGATA+AGG 0.446048 7_3:+57132155 None:intergenic
TGGGACGAGGTAGTAATCTA+TGG 0.447368 7_3:+57133651 None:intergenic
AGATCATAGGAGATTTAGAT+TGG 0.447574 7_3:-57137197 None:intergenic
TGATCCCAATGCTTGTGGTT+GGG 0.448672 7_3:-57132829 Msa1111430:CDS
GCACTTCACTTGAGATTGCC+AGG 0.449730 7_3:+57132038 None:intergenic
GATTCAAGCTGTCTCAAGAC+TGG 0.449905 7_3:+57133161 None:intergenic
AGTTAAGATATTTGTCGAAT+CGG 0.454272 7_3:+57132880 None:intergenic
AGGAAAAGAAGATCCTCCTT+TGG 0.456132 7_3:+57137017 None:intergenic
GATAAGCAGTGAATTCCATT+TGG 0.456313 7_3:+57133685 None:intergenic
GATGCGAGATCAGATCATTA+TGG 0.457993 7_3:-57134085 Msa1111430:CDS
ACATGCCATGATTTATTTAG+CGG 0.458664 7_3:+57132326 None:intergenic
AATTCCATTTGGTATGGTCT+TGG 0.460571 7_3:+57133696 None:intergenic
CTCCGATGTTACAAGCCAAC+AGG 0.462187 7_3:-57135281 Msa1111430:CDS
AATGCTTGTGGTTGGGCATA+CGG 0.463683 7_3:-57132822 Msa1111430:CDS
AGGTGAAACACATGCTTTGA+AGG 0.468782 7_3:+57133305 None:intergenic
ATGTCCAGCACGAATGATAT+GGG 0.468872 7_3:-57134994 Msa1111430:CDS
TTGACATATTTGGTCCAGTA+AGG 0.471463 7_3:+57132188 None:intergenic
AGCGGCATTGTATGTGTGTA+TGG 0.472570 7_3:+57137051 None:intergenic
AAAGAGTATTATTTCAAGGC+AGG 0.473099 7_3:-57133128 Msa1111430:CDS
TAGGTAAATACAACCTTTGG+AGG 0.475012 7_3:-57134149 Msa1111430:CDS
TTGTCTCAAATTAGTGAGAA+TGG 0.475535 7_3:+57131885 None:intergenic
AGAGAAAAGGATGGCAAAGC+GGG 0.478274 7_3:-57134262 Msa1111430:CDS
TGCAGCAATTAATAGAGAAA+AGG 0.478481 7_3:-57134275 Msa1111430:intron
AGAGAGGGTTTATGGCGTAA+TGG 0.483737 7_3:+57137111 None:intergenic
TTATGGAATGTGGATCTTCA+TGG 0.483883 7_3:-57132945 Msa1111430:CDS
TCCAATTTCGGATAAACTTG+TGG 0.484620 7_3:+57133020 None:intergenic
GATCTTCATGGAAAAGTTAA+CGG 0.487784 7_3:-57132933 Msa1111430:CDS
CACATCCGCTAAATAAATCA+TGG 0.490767 7_3:-57132331 Msa1111430:CDS
TTTGATTTCAGAATGAAGAC+AGG 0.492079 7_3:-57132409 Msa1111430:intron
GGCAAAGCGGGCTGCTGAGT+TGG 0.492938 7_3:-57134250 Msa1111430:CDS
GCTACAAACTGCTGATGAGC+AGG 0.495112 7_3:-57133764 Msa1111430:CDS
TCTTGGCAGCCAACTGACTA+AGG 0.499672 7_3:+57133713 None:intergenic
GGCTGTTGCAGGCTACCAAA+TGG 0.500770 7_3:-57135174 Msa1111430:intron
TATGCCCAACCACAAGCATT+GGG 0.502397 7_3:+57132825 None:intergenic
CCATAGAATGTCATTAGCCC+TGG 0.504949 7_3:+57132359 None:intergenic
TAGGGCATAATGATAAAGAC+TGG 0.506359 7_3:+57133585 None:intergenic
ATAACTGCAAGAAAGCTACT+TGG 0.509296 7_3:+57131710 None:intergenic
TCTTAGACAAGAAGTTCAAA+AGG 0.513227 7_3:-57134768 Msa1111430:CDS
GCAGGCCACCCATCCACTAC+TGG 0.513960 7_3:-57133110 Msa1111430:CDS
ACATAGATTGTAGCTTTACC+AGG 0.515583 7_3:+57133227 None:intergenic
CTTGTGGAAGATAGAACCTC+AGG 0.518942 7_3:+57133036 None:intergenic
AAAATGTTGATGAATTTAAG+TGG 0.519458 7_3:-57133202 Msa1111430:CDS
AGAAGAACAAAAGCGAGAAG+AGG 0.522077 7_3:+57136997 None:intergenic
TGTAAGCTAAGTGAATGGTC+TGG 0.522229 7_3:-57132140 Msa1111430:CDS
ATCTCCGTACGATCTATACT+TGG 0.524349 7_3:+57132284 None:intergenic
GGGATAGAGATGGCGAAGCA+AGG 0.525715 7_3:+57131956 None:intergenic
GTTGTCCAGAAGGATTTGAC+TGG 0.529202 7_3:-57132969 Msa1111430:CDS
TTGATCCCAATGCTTGTGGT+TGG 0.532084 7_3:-57132830 Msa1111430:CDS
CGAGGTAGTAATCTATGGTA+AGG 0.535897 7_3:+57133656 None:intergenic
GCAGTGAATTCCATTTGGTA+TGG 0.537356 7_3:+57133690 None:intergenic
AGGCCCCATATCATTCGTGC+TGG 0.538645 7_3:+57134990 None:intergenic
GTATGCCCAACCACAAGCAT+TGG 0.539148 7_3:+57132824 None:intergenic
CAAGCATTGACTCTATCACT+TGG 0.542541 7_3:+57131991 None:intergenic
CAGTCCAAGTATAGATCGTA+CGG 0.543562 7_3:-57132288 Msa1111430:CDS
AGCATCAGAGTATACAATGA+AGG 0.550055 7_3:+57131824 None:intergenic
AAGCACATTCCTTAGTCAGT+TGG 0.552027 7_3:-57133722 Msa1111430:CDS
GCTGCCAAGACCATACCAAA+TGG 0.554333 7_3:-57133700 Msa1111430:CDS
AACTTTGATCCCAATGCTTG+TGG 0.555666 7_3:-57132834 Msa1111430:CDS
AGAATGCTGATTCTACCGTT+CGG 0.555890 7_3:-57134110 Msa1111430:CDS
AGATCAGATCATTATGGCTA+GGG 0.557672 7_3:-57134079 Msa1111430:CDS
ACATTACTGGCATATATCAC+AGG 0.557897 7_3:-57132761 Msa1111430:CDS
TAACCAAATTCTCAGTCATA+GGG 0.564966 7_3:+57133611 None:intergenic
ACAAGAAGTTCAAAAGGAGA+AGG 0.565190 7_3:-57134762 Msa1111430:CDS
CATTGTATACTCTGATGCTA+CGG 0.566493 7_3:-57131820 Msa1111430:three_prime_UTR
TCCCGTAAGGCTAGCCAGAA+GGG 0.568105 7_3:-57134622 Msa1111430:intron
AAAATCAATGGCAATGGCGT+GGG 0.568567 7_3:+57131936 None:intergenic
GAGATCAGATCATTATGGCT+AGG 0.570674 7_3:-57134080 Msa1111430:CDS
ACTGCAAGAAAGCTACTTGG+AGG 0.572652 7_3:+57131713 None:intergenic
GTCCCGTAAGGCTAGCCAGA+AGG 0.574160 7_3:-57134623 Msa1111430:CDS
AAATTAGGGACATTACCTCC+AGG 0.574173 7_3:-57132377 Msa1111430:CDS
CCTTTGGTTCTGTTGTTAAG+CGG 0.576686 7_3:+57137033 None:intergenic
ACATGTTTGATTTGAAGGTG+TGG 0.576976 7_3:-57132794 Msa1111430:CDS
AATAAATCATGGCATGTACT+CGG 0.577057 7_3:-57132320 Msa1111430:CDS
TACCTGTTGGCTTGTAACAT+CGG 0.579742 7_3:+57135279 None:intergenic
TTAGAAGCACCAGTAGTGGA+TGG 0.580206 7_3:+57133101 None:intergenic
GAAGTTCAAAAGGAGAAGGA+AGG 0.583365 7_3:-57134758 Msa1111430:CDS
GAGATTAGAAGCACCAGTAG+TGG 0.588353 7_3:+57133097 None:intergenic
GGATAGAGATGGCGAAGCAA+GGG 0.590200 7_3:+57131957 None:intergenic
TCAATTGTATGACTGCAAGT+TGG 0.592735 7_3:-57133809 Msa1111430:CDS
GGAACTGTAAGCTAAGTGAA+TGG 0.593776 7_3:-57132145 Msa1111430:CDS
TACCAAATGGAGAGAACAGA+AGG 0.593932 7_3:-57135161 Msa1111430:CDS
CTGATCTCGCATCAACCGAA+CGG 0.595642 7_3:+57134095 None:intergenic
TTTCAATGCTCAACCACCTG+AGG 0.596049 7_3:-57133052 Msa1111430:CDS
TACAGTTCCTAAGATAAGGA+TGG 0.597078 7_3:+57132159 None:intergenic
ATTCAAGCTGTCTCAAGACT+GGG 0.597835 7_3:+57133162 None:intergenic
TAACTTAAGCTCTGTTCGCG+AGG 0.597875 7_3:-57131648 None:intergenic
GTATACTCTGATGCTACGGA+TGG 0.599754 7_3:-57131816 Msa1111430:three_prime_UTR
TGTACCAAGAACTGCAAACA+CGG 0.602677 7_3:-57134017 Msa1111430:CDS
GTATAAAACGAGCTACCTGT+TGG 0.602839 7_3:+57135266 None:intergenic
AATTTAGTTTATCAGTAACA+AGG 0.603779 7_3:+57133285 None:intergenic
TGATGACATTGTTGTCCAGA+AGG 0.605837 7_3:-57132979 Msa1111430:CDS
TTTGACTGGATTATGGAATG+TGG 0.606404 7_3:-57132955 Msa1111430:CDS
ATTGTGCATACCTCTGGTGT+AGG 0.607000 7_3:+57133947 None:intergenic
TAGAAGCACCAGTAGTGGAT+GGG 0.607302 7_3:+57133102 None:intergenic
ATGCAGCAGGTCTTCCTCAG+TGG 0.620368 7_3:-57134653 Msa1111430:intron
GCAATTAATAGAGAAAAGGA+TGG 0.621349 7_3:-57134271 Msa1111430:CDS
CTCAACTGTTGTGAATGCAA+AGG 0.621934 7_3:-57133524 Msa1111430:intron
CCGCTTAACAACAGAACCAA+AGG 0.625978 7_3:-57137033 Msa1111430:CDS
AAGCACCAGTAGTGGATGGG+TGG 0.630751 7_3:+57133105 None:intergenic
ATAATGGTAATATGAAGCCA+TGG 0.631825 7_3:-57132238 Msa1111430:CDS
GTTGGTTATTGGGAAAGTAA+GGG 0.635336 7_3:-57133791 Msa1111430:CDS
GAGTCAGCGTGCTTTAGGTG+AGG 0.637586 7_3:-57133986 Msa1111430:CDS
CTTAACAACAGAACCAAAGG+AGG 0.638099 7_3:-57137030 Msa1111430:CDS
CTGGGGTATGTATATTCTGG+AGG 0.642602 7_3:+57132080 None:intergenic
AGGATCTTTATAAGTAAACA+AGG 0.645552 7_3:+57131844 None:intergenic
TTGATTTCAGAATGAAGACA+GGG 0.646041 7_3:-57132408 Msa1111430:intron
AGTGGACTGATAGTCCCGTA+AGG 0.647693 7_3:-57134635 Msa1111430:CDS
GAAGCGAAGAAGAAGATGAG+AGG 0.651947 7_3:+57136961 None:intergenic
AATTCAATCATACTCTAACA+AGG 0.652292 7_3:+57132016 None:intergenic
AGGGCATAATGATAAAGACT+GGG 0.655474 7_3:+57133586 None:intergenic
TAGAATGTCATTAGCCCTGG+AGG 0.657306 7_3:+57132362 None:intergenic
AATTAGGGACATTACCTCCA+GGG 0.657912 7_3:-57132376 Msa1111430:CDS
TAGAGAAAAGGATGGCAAAG+CGG 0.669580 7_3:-57134263 Msa1111430:CDS
ATTCTCACTAATTTGAGACA+AGG 0.669921 7_3:-57131883 Msa1111430:three_prime_UTR
TAGATTGTAGCTTTACCAGG+AGG 0.679016 7_3:+57133230 None:intergenic
TGTCCAGCACGAATGATATG+GGG 0.682822 7_3:-57134993 Msa1111430:CDS
GCAATGGCGTGGGATAGAGA+TGG 0.686084 7_3:+57131946 None:intergenic
AACGGTGCAGTTGAAACATG+TGG 0.702671 7_3:-57132915 Msa1111430:CDS
TTACTGGCATATATCACAGG+TGG 0.707903 7_3:-57132758 Msa1111430:CDS
GTGGAAGATAGAACCTCAGG+TGG 0.712503 7_3:+57133039 None:intergenic
CTGATGCTGACCTACACCAG+AGG 0.718609 7_3:-57133957 Msa1111430:intron
ACGGGACTATCAGTCCACTG+AGG 0.806472 7_3:+57134639 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAACAAAATGTTATTTTTT+TGG - chr7_3:57132114-57132133 Msa1111430:three_prime_UTR 10.0%
!!! CATTATTATAATTTTGTAAA+TGG - chr7_3:57132533-57132552 Msa1111430:intron 10.0%
!! ATTATTTATCAAATAATAGA+TGG + chr7_3:57135455-57135474 None:intergenic 10.0%
!!! ATTAGTTTTAAAATAGAAAT+TGG + chr7_3:57136248-57136267 None:intergenic 10.0%
!!! TTTATTGTTTTTGTTCAATT+CGG - chr7_3:57132052-57132071 Msa1111430:three_prime_UTR 15.0%
!!! ATAATTTTGTAAATGGAATT+TGG - chr7_3:57132540-57132559 Msa1111430:intron 15.0%
!! TAGCATTCTAATAATATAAT+TGG - chr7_3:57133448-57133467 Msa1111430:intron 15.0%
!! TTAATGAAAAATTAATGAGA+AGG + chr7_3:57134167-57134186 None:intergenic 15.0%
!! TTCACTAAAGATAATTAATT+AGG + chr7_3:57134963-57134982 None:intergenic 15.0%
!! AAATCAAACATGAAAAAAAA+TGG + chr7_3:57136418-57136437 None:intergenic 15.0%
!! CTTGATTATAATTCAGTAAT+GGG - chr7_3:57132019-57132038 Msa1111430:three_prime_UTR 20.0%
!!! TTATTGTTTTTGTTCAATTC+GGG - chr7_3:57132053-57132072 Msa1111430:three_prime_UTR 20.0%
!!! TCTTTTCTTGATTTTTGATT+TGG - chr7_3:57132227-57132246 Msa1111430:CDS 20.0%
!!! ATTTGTTAATCAACTGAATT+TGG - chr7_3:57132332-57132351 Msa1111430:CDS 20.0%
!! ATGTATGCATTGTATTAAAT+GGG - chr7_3:57132871-57132890 Msa1111430:CDS 20.0%
!! TACAAACACAATTTAGTTAA+TGG + chr7_3:57134292-57134311 None:intergenic 20.0%
!! AACATAAGTTAATGAATGAA+GGG + chr7_3:57135492-57135511 None:intergenic 20.0%
!!! AATTTAGTTTATCAGTAACA+AGG + chr7_3:57135557-57135576 None:intergenic 20.0%
!!! GTTACTGATAAACTAAATTT+TGG - chr7_3:57135558-57135577 Msa1111430:intron 20.0%
!!! AAAATGTTGATGAATTTAAG+TGG - chr7_3:57135637-57135656 Msa1111430:intron 20.0%
!!! AATGAAAGAGTATTATTTCA+AGG - chr7_3:57135707-57135726 Msa1111430:intron 20.0%
!! AAAAGAATCTTATCCAATTT+CGG + chr7_3:57135834-57135853 None:intergenic 20.0%
! CCATTACTGAATTATAATCA+AGG + chr7_3:57132021-57132040 None:intergenic 25.0%
! CCTTGATTATAATTCAGTAA+TGG - chr7_3:57132018-57132037 Msa1111430:three_prime_UTR 25.0%
!! TTTAGGAGGAAATTAGTTTA+AGG - chr7_3:57132419-57132438 Msa1111430:intron 25.0%
! TAAACTCTATAGCAGTATAT+CGG + chr7_3:57132721-57132740 None:intergenic 25.0%
! TATACTGCTATAGAGTTTAT+AGG - chr7_3:57132722-57132741 Msa1111430:intron 25.0%
! ATACTGCTATAGAGTTTATA+GGG - chr7_3:57132723-57132742 Msa1111430:intron 25.0%
! GATGTATGCATTGTATTAAA+TGG - chr7_3:57132870-57132889 Msa1111430:CDS 25.0%
!!! TTATTGGTTTAAATCCTTGT+GGG + chr7_3:57133045-57133064 None:intergenic 25.0%
! CATATGATCCTTCTATTATA+TGG - chr7_3:57133274-57133293 Msa1111430:CDS 25.0%
!!! TTATACATTTTCAGGTTCAT+TGG - chr7_3:57133590-57133609 Msa1111430:CDS 25.0%
!!! CTTTTGGAAAAAGAGATTTA+AGG + chr7_3:57133714-57133733 None:intergenic 25.0%
!! TAAATCTCTTTTTCCAAAAG+AGG - chr7_3:57133714-57133733 Msa1111430:CDS 25.0%
!!! ACAATATGGTATTGATTAGA+AGG + chr7_3:57133808-57133827 None:intergenic 25.0%
! TCTAATCAATACCATATTGT+AGG - chr7_3:57133808-57133827 Msa1111430:CDS 25.0%
! AAGAAGCAGAAAGATTATTT+CGG + chr7_3:57133892-57133911 None:intergenic 25.0%
! ACATTAAAATCAGTAGCAAT+AGG + chr7_3:57134017-57134036 None:intergenic 25.0%
! GTGAAATAAAATAAAGCATG+GGG + chr7_3:57134145-57134164 None:intergenic 25.0%
! GGTGAAATAAAATAAAGCAT+GGG + chr7_3:57134146-57134165 None:intergenic 25.0%
! AGGTGAAATAAAATAAAGCA+TGG + chr7_3:57134147-57134166 None:intergenic 25.0%
!! TAATTTTTCATTAATGCAGC+AGG - chr7_3:57134173-57134192 Msa1111430:CDS 25.0%
!! CATGCTATTTGTATATGAAA+AGG + chr7_3:57134373-57134392 None:intergenic 25.0%
! ACATGAAAAAATCAAAGCAA+TGG - chr7_3:57134982-57135001 Msa1111430:CDS 25.0%
! CATGAAAAAATCAAAGCAAT+GGG - chr7_3:57134983-57135002 Msa1111430:CDS 25.0%
!!! ACATTCCTTTTTAAAGATGA+TGG - chr7_3:57135392-57135411 Msa1111430:intron 25.0%
!! CAAATCCATCATCTTTAAAA+AGG + chr7_3:57135400-57135419 None:intergenic 25.0%
! CAACATAAGTTAATGAATGA+AGG + chr7_3:57135493-57135512 None:intergenic 25.0%
! CAATAAAAACCACATATTCA+TGG + chr7_3:57135586-57135605 None:intergenic 25.0%
! AGTTAAGATATTTGTCGAAT+CGG + chr7_3:57135962-57135981 None:intergenic 25.0%
!!! TCAAAGTTTTTTGCAATATG+TGG + chr7_3:57135993-57136012 None:intergenic 25.0%
!!! AATGAACATGTTTGATTTGA+AGG - chr7_3:57136040-57136059 Msa1111430:intron 25.0%
!! TTACATCATGTTTCTATTCT+CGG - chr7_3:57136139-57136158 Msa1111430:intron 25.0%
! ATGGTTATACTTGACATATT+TGG + chr7_3:57136664-57136683 None:intergenic 25.0%
! AATTCAATCATACTCTAACA+AGG + chr7_3:57136826-57136845 None:intergenic 25.0%
! GAATGAAAAGCAAAAATCAA+TGG + chr7_3:57136918-57136937 None:intergenic 25.0%
! AGGATCTTTATAAGTAAACA+AGG + chr7_3:57136998-57137017 None:intergenic 25.0%
ATAGAAACAGAACACGAAAT+GGG + chr7_3:57131989-57132008 None:intergenic 30.0%
AATAGAAACAGAACACGAAA+TGG + chr7_3:57131990-57132009 None:intergenic 30.0%
AAGTGTTAAGTAGTGCAATT+GGG - chr7_3:57132161-57132180 Msa1111430:CDS 30.0%
TGAGATAAAAACACATTTGC+AGG - chr7_3:57132454-57132473 Msa1111430:intron 30.0%
GAGATAAAAACACATTTGCA+GGG - chr7_3:57132455-57132474 Msa1111430:intron 30.0%
TTAAGCCAAGTATATACTCT+TGG + chr7_3:57132498-57132517 None:intergenic 30.0%
TATACTTGGCTTAAGTTCAT+TGG - chr7_3:57132504-57132523 Msa1111430:intron 30.0%
!! CTTATTGGTTTAAATCCTTG+TGG + chr7_3:57133046-57133065 None:intergenic 30.0%
TCTAATACTCACTCTCTTAT+TGG + chr7_3:57133061-57133080 None:intergenic 30.0%
ACATCATTAATGAGTAGCAA+AGG + chr7_3:57133142-57133161 None:intergenic 30.0%
! TAGAGCATCCATATAATAGA+AGG + chr7_3:57133285-57133304 None:intergenic 30.0%
GTCCTGTTTAAACACAAATA+TGG - chr7_3:57133320-57133339 Msa1111430:intron 30.0%
AGCCATATTTGTGTTTAAAC+AGG + chr7_3:57133325-57133344 None:intergenic 30.0%
!!! ATCCTCATCTTTTGTTGTTA+AGG - chr7_3:57133359-57133378 Msa1111430:intron 30.0%
! AGCTCGTTTTATACATTTTC+AGG - chr7_3:57133582-57133601 Msa1111430:CDS 30.0%
AACGACATAGGGTAAAAAAA+TGG + chr7_3:57133645-57133664 None:intergenic 30.0%
!!! ATTTTTTTACCCTATGTCGT+TGG - chr7_3:57133644-57133663 Msa1111430:CDS 30.0%
!! ATGGTATTGATTAGAAGGTT+GGG + chr7_3:57133803-57133822 None:intergenic 30.0%
!! TATGGTATTGATTAGAAGGT+TGG + chr7_3:57133804-57133823 None:intergenic 30.0%
AACATCAAGAACCTACAATA+TGG + chr7_3:57133822-57133841 None:intergenic 30.0%
GAAATAATCTTTCTGCTTCT+TGG - chr7_3:57133891-57133910 Msa1111430:intron 30.0%
AATAGGACAATAATGCCTTT+CGG + chr7_3:57134000-57134019 None:intergenic 30.0%
TCTTAGACAAGAAGTTCAAA+AGG - chr7_3:57134071-57134090 Msa1111430:CDS 30.0%
ATCAAGGCTACTATTATTGT+AGG + chr7_3:57134427-57134446 None:intergenic 30.0%
TGAAAATATTGTTTGACCTG+TGG - chr7_3:57134465-57134484 Msa1111430:intron 30.0%
TGCAGCAATTAATAGAGAAA+AGG - chr7_3:57134564-57134583 Msa1111430:intron 30.0%
GCAATTAATAGAGAAAAGGA+TGG - chr7_3:57134568-57134587 Msa1111430:intron 30.0%
TTCTAGGTAAATACAACCTT+TGG - chr7_3:57134687-57134706 Msa1111430:intron 30.0%
! TTTCATTTTCTTTCCTCCAA+AGG + chr7_3:57134706-57134725 None:intergenic 30.0%
TAACCAAATTCTCAGTCATA+GGG + chr7_3:57135231-57135250 None:intergenic 30.0%
TTAACCAAATTCTCAGTCAT+AGG + chr7_3:57135232-57135251 None:intergenic 30.0%
CAAAACATTGTCTGAGAATA+GGG + chr7_3:57135275-57135294 None:intergenic 30.0%
! AGTCTTTTATGATACATGTG+CGG - chr7_3:57135350-57135369 Msa1111430:intron 30.0%
AAGTTAATGAATGAAGGGTT+GGG + chr7_3:57135487-57135506 None:intergenic 30.0%
TAAGTTAATGAATGAAGGGT+TGG + chr7_3:57135488-57135507 None:intergenic 30.0%
!! AAAGAGTATTATTTCAAGGC+AGG - chr7_3:57135711-57135730 Msa1111430:intron 30.0%
!! TTGAGCATTGAAAGATACTT+TGG + chr7_3:57135780-57135799 None:intergenic 30.0%
GATCTTCATGGAAAAGTTAA+CGG - chr7_3:57135906-57135925 Msa1111430:intron 30.0%
! TTTGATTTCAGAATGAAGAC+AGG - chr7_3:57136430-57136449 Msa1111430:intron 30.0%
TTGATTTCAGAATGAAGACA+GGG - chr7_3:57136431-57136450 Msa1111430:intron 30.0%
ACATGCCATGATTTATTTAG+CGG + chr7_3:57136516-57136535 None:intergenic 30.0%
AATAAATCATGGCATGTACT+CGG - chr7_3:57136519-57136538 Msa1111430:intron 30.0%
ATAATGGTAATATGAAGCCA+TGG - chr7_3:57136601-57136620 Msa1111430:intron 30.0%
AGTATAACCATCCTTATCTT+AGG - chr7_3:57136673-57136692 Msa1111430:intron 30.0%
TGTTCTTTGTACTTAGGAAT+TGG + chr7_3:57136731-57136750 None:intergenic 30.0%
!! AAAGAGTGTTCTTTGTACTT+AGG + chr7_3:57136737-57136756 None:intergenic 30.0%
AAAGCAAAAATCAATGGCAA+TGG + chr7_3:57136912-57136931 None:intergenic 30.0%
TTGTCTCAAATTAGTGAGAA+TGG + chr7_3:57136957-57136976 None:intergenic 30.0%
! ATTCTCACTAATTTGAGACA+AGG - chr7_3:57136956-57136975 Msa1111430:CDS 30.0%
!!! GGTTTTGAAGGAGTAAATTA+AGG - chr7_3:57137102-57137121 Msa1111430:five_prime_UTR 30.0%
TTCAGCGTTAATCATGGAAT+CGG - chr7_3:57131694-57131713 Msa1111430:three_prime_UTR 35.0%
ACTTCTTCTTCTTCTTCTTC+CGG - chr7_3:57131911-57131930 Msa1111430:three_prime_UTR 35.0%
! GAAGTGTTAAGTAGTGCAAT+TGG - chr7_3:57132160-57132179 Msa1111430:CDS 35.0%
! TAAGTAGTGCAATTGGGTTT+TGG - chr7_3:57132167-57132186 Msa1111430:CDS 35.0%
CTATGTTGTAGTGATTACTG+AGG - chr7_3:57132255-57132274 Msa1111430:CDS 35.0%
TTGTAGTGATTACTGAGGTT+TGG - chr7_3:57132260-57132279 Msa1111430:CDS 35.0%
ACTGAATTTGGCTACTGTAT+TGG - chr7_3:57132344-57132363 Msa1111430:CDS 35.0%
ACTGTATTGGATTTAGATGC+TGG - chr7_3:57132357-57132376 Msa1111430:CDS 35.0%
CTGTATTGGATTTAGATGCT+GGG - chr7_3:57132358-57132377 Msa1111430:CDS 35.0%
TGTATTGGATTTAGATGCTG+GGG - chr7_3:57132359-57132378 Msa1111430:CDS 35.0%
!! TTGAAATTTGAAGCACTGTG+TGG - chr7_3:57132386-57132405 Msa1111430:CDS 35.0%
TGTGTGGTTAAGTTCACTTT+AGG - chr7_3:57132402-57132421 Msa1111430:intron 35.0%
TATAGCAGTATATCGGATAG+CGG + chr7_3:57132714-57132733 None:intergenic 35.0%
GCTATAGAGTTTATAGGGTT+CGG - chr7_3:57132728-57132747 Msa1111430:intron 35.0%
TGGGATTAACAAAACGTAGA+TGG - chr7_3:57132768-57132787 Msa1111430:CDS 35.0%
TCCAACACTCACTCTATTAT+TGG - chr7_3:57132964-57132983 Msa1111430:CDS 35.0%
TCCAATAATAGAGTGAGTGT+TGG + chr7_3:57132968-57132987 None:intergenic 35.0%
AAAATTGAACCCACACAAAG+TGG + chr7_3:57133011-57133030 None:intergenic 35.0%
GTCCTTAACAACAAAAGATG+AGG + chr7_3:57133364-57133383 None:intergenic 35.0%
! CGGAAATTTTCTAGACTCAA+AGG + chr7_3:57133872-57133891 None:intergenic 35.0%
ATAGGACAATAATGCCTTTC+GGG + chr7_3:57133999-57134018 None:intergenic 35.0%
! CTTGTCTAAGATGTGTTTCT+GGG + chr7_3:57134062-57134081 None:intergenic 35.0%
! TCTTGTCTAAGATGTGTTTC+TGG + chr7_3:57134063-57134082 None:intergenic 35.0%
ACAAGAAGTTCAAAAGGAGA+AGG - chr7_3:57134077-57134096 Msa1111430:CDS 35.0%
! ATCTCCCATACCTTTTAATG+TGG - chr7_3:57134322-57134341 Msa1111430:intron 35.0%
! AGCACCACATTAAAAGGTAT+GGG + chr7_3:57134329-57134348 None:intergenic 35.0%
AAGCACCACATTAAAAGGTA+TGG + chr7_3:57134330-57134349 None:intergenic 35.0%
ATCACAAGCACCACATTAAA+AGG + chr7_3:57134335-57134354 None:intergenic 35.0%
GCTACTATTATTGTAGGTTG+GGG + chr7_3:57134421-57134440 None:intergenic 35.0%
GGCTACTATTATTGTAGGTT+GGG + chr7_3:57134422-57134441 None:intergenic 35.0%
AGGCTACTATTATTGTAGGT+TGG + chr7_3:57134423-57134442 None:intergenic 35.0%
CAGAACATCATACTTCATCA+AGG + chr7_3:57134443-57134462 None:intergenic 35.0%
TAGGTAAATACAACCTTTGG+AGG - chr7_3:57134690-57134709 Msa1111430:intron 35.0%
AGATCAGATCATTATGGCTA+GGG - chr7_3:57134760-57134779 Msa1111430:CDS 35.0%
TCAATTGTATGACTGCAAGT+TGG - chr7_3:57135030-57135049 Msa1111430:intron 35.0%
!! TATGACTGCAAGTTGGTTAT+TGG - chr7_3:57135037-57135056 Msa1111430:intron 35.0%
!! ATGACTGCAAGTTGGTTATT+GGG - chr7_3:57135038-57135057 Msa1111430:intron 35.0%
AGTTGGTTATTGGGAAAGTA+AGG - chr7_3:57135047-57135066 Msa1111430:intron 35.0%
GTTGGTTATTGGGAAAGTAA+GGG - chr7_3:57135048-57135067 Msa1111430:intron 35.0%
AATTCCATTTGGTATGGTCT+TGG + chr7_3:57135146-57135165 None:intergenic 35.0%
GATAAGCAGTGAATTCCATT+TGG + chr7_3:57135157-57135176 None:intergenic 35.0%
! ATAGGGAACTTTCTCTTTTC+AGG + chr7_3:57135214-57135233 None:intergenic 35.0%
AGGGCATAATGATAAAGACT+GGG + chr7_3:57135256-57135275 None:intergenic 35.0%
TAGGGCATAATGATAAAGAC+TGG + chr7_3:57135257-57135276 None:intergenic 35.0%
CCAAAACATTGTCTGAGAAT+AGG + chr7_3:57135276-57135295 None:intergenic 35.0%
! CCTATTCTCAGACAATGTTT+TGG - chr7_3:57135273-57135292 Msa1111430:CDS 35.0%
! GTCTTTTATGATACATGTGC+GGG - chr7_3:57135351-57135370 Msa1111430:intron 35.0%
!! AAAGATGATGGATTTGAGCT+TGG - chr7_3:57135404-57135423 Msa1111430:intron 35.0%
!!! ATTTTGGAGCCATGAATATG+TGG - chr7_3:57135574-57135593 Msa1111430:intron 35.0%
! TGGTTTTTATTGAATCCTCC+TGG - chr7_3:57135594-57135613 Msa1111430:intron 35.0%
! ACATAGATTGTAGCTTTACC+AGG + chr7_3:57135615-57135634 None:intergenic 35.0%
TCCACAAGTTTATCCGAAAT+TGG - chr7_3:57135818-57135837 Msa1111430:intron 35.0%
TCCAATTTCGGATAAACTTG+TGG + chr7_3:57135822-57135841 None:intergenic 35.0%
ATAATCCAGTCAAATCCTTC+TGG + chr7_3:57135878-57135897 None:intergenic 35.0%
AGAAGGATTTGACTGGATTA+TGG - chr7_3:57135877-57135896 Msa1111430:intron 35.0%
TTTGACTGGATTATGGAATG+TGG - chr7_3:57135884-57135903 Msa1111430:intron 35.0%
TTATGGAATGTGGATCTTCA+TGG - chr7_3:57135894-57135913 Msa1111430:intron 35.0%
!! ACATGTTTGATTTGAAGGTG+TGG - chr7_3:57136045-57136064 Msa1111430:intron 35.0%
! TTTGAAGGTGTGGAAAAAGA+AGG - chr7_3:57136055-57136074 Msa1111430:intron 35.0%
TGGAAAAAGAAGGACATTAC+TGG - chr7_3:57136065-57136084 Msa1111430:intron 35.0%
ACATTACTGGCATATATCAC+AGG - chr7_3:57136078-57136097 Msa1111430:intron 35.0%
GAGCAAATTGAACATAACAG+CGG - chr7_3:57136115-57136134 Msa1111430:intron 35.0%
! CATGTTTCTATTCTCGGAAT+TGG - chr7_3:57136145-57136164 Msa1111430:intron 35.0%
! ACAGGGTACTATGGAAATTA+GGG - chr7_3:57136448-57136467 Msa1111430:intron 35.0%
CACATCCGCTAAATAAATCA+TGG - chr7_3:57136508-57136527 Msa1111430:intron 35.0%
TTGACATATTTGGTCCAGTA+AGG + chr7_3:57136654-57136673 None:intergenic 35.0%
TACAGTTCCTAAGATAAGGA+TGG + chr7_3:57136683-57136702 None:intergenic 35.0%
AGCTTACAGTTCCTAAGATA+AGG + chr7_3:57136687-57136706 None:intergenic 35.0%
TTGAGATTGCCAGGTTAAAA+AGG + chr7_3:57136795-57136814 None:intergenic 35.0%
AGCATCAGAGTATACAATGA+AGG + chr7_3:57137018-57137037 None:intergenic 35.0%
CATTGTATACTCTGATGCTA+CGG - chr7_3:57137019-57137038 Msa1111430:CDS 35.0%
TCAGAAGTAGCTTTCTTGTA+TGG - chr7_3:57137081-57137100 Msa1111430:five_prime_UTR 35.0%
!!! GCTTTCTTGTATGGTTTTGA+AGG - chr7_3:57137090-57137109 Msa1111430:five_prime_UTR 35.0%
ATAACTGCAAGAAAGCTACT+TGG + chr7_3:57137132-57137151 None:intergenic 35.0%
TGCACTTTCAGCGTTAATCA+TGG - chr7_3:57131688-57131707 Msa1111430:three_prime_UTR 40.0%
!! CCTTTGGTTCTGTTGTTAAG+CGG + chr7_3:57131809-57131828 None:intergenic 40.0%
CTTAACAACAGAACCAAAGG+AGG - chr7_3:57131809-57131828 Msa1111430:three_prime_UTR 40.0%
AGGAAAAGAAGATCCTCCTT+TGG + chr7_3:57131825-57131844 None:intergenic 40.0%
AGAAGAACAAAAGCGAGAAG+AGG + chr7_3:57131845-57131864 None:intergenic 40.0%
! TGTAAGATCTGTGCTTGCTA+TGG - chr7_3:57132138-57132157 Msa1111430:CDS 40.0%
! TACTGAGGTTTGGAGTGATT+TGG - chr7_3:57132270-57132289 Msa1111430:CDS 40.0%
! ACTGAGGTTTGGAGTGATTT+GGG - chr7_3:57132271-57132290 Msa1111430:CDS 40.0%
CACACTAACACTACCATCAA+TGG + chr7_3:57132305-57132324 None:intergenic 40.0%
GTGGTTAAGTTCACTTTAGG+AGG - chr7_3:57132405-57132424 Msa1111430:intron 40.0%
! TGCTGCCAAGAGTATATACT+TGG - chr7_3:57132490-57132509 Msa1111430:intron 40.0%
TGTAGATCAGTGCACTATTG+CGG - chr7_3:57132589-57132608 Msa1111430:intron 40.0%
ATAGCAGTATATCGGATAGC+GGG + chr7_3:57132713-57132732 None:intergenic 40.0%
CTTTGCACTTTAGATACCCT+AGG - chr7_3:57132811-57132830 Msa1111430:CDS 40.0%
ATTAAATGGGAACAGCCGAT+AGG - chr7_3:57132884-57132903 Msa1111430:CDS 40.0%
TTAAATGGGAACAGCCGATA+GGG - chr7_3:57132885-57132904 Msa1111430:CDS 40.0%
!! ATGGCTACAATGGTTGATAG+AGG - chr7_3:57132909-57132928 Msa1111430:CDS 40.0%
TTTCAAAGTGTAGACCCACA+AGG - chr7_3:57133028-57133047 Msa1111430:CDS 40.0%
! AGTGTTGCTAGCATTACTCA+TGG - chr7_3:57133098-57133117 Msa1111430:CDS 40.0%
! TTCCTCGGTTTAGAACTCAT+TGG - chr7_3:57133219-57133238 Msa1111430:CDS 40.0%
AGTGTAATGTCCTTGATGTG+AGG - chr7_3:57133410-57133429 Msa1111430:intron 40.0%
ATTTCTTCCTCCTCACATCA+AGG + chr7_3:57133423-57133442 None:intergenic 40.0%
TGATGTGAGGAGGAAGAAAT+AGG - chr7_3:57133423-57133442 Msa1111430:intron 40.0%
!! TACCTGTTGGCTTGTAACAT+CGG + chr7_3:57133563-57133582 None:intergenic 40.0%
GTATAAAACGAGCTACCTGT+TGG + chr7_3:57133576-57133595 None:intergenic 40.0%
TACCAAATGGAGAGAACAGA+AGG - chr7_3:57133678-57133697 Msa1111430:CDS 40.0%
!! GTATTGATTAGAAGGTTGGG+AGG + chr7_3:57133800-57133819 None:intergenic 40.0%
TATGTCCAGCACGAATGATA+TGG - chr7_3:57133844-57133863 Msa1111430:CDS 40.0%
ATGTCCAGCACGAATGATAT+GGG - chr7_3:57133845-57133864 Msa1111430:CDS 40.0%
GACTTCAAACGCAACAAATC+AGG - chr7_3:57133931-57133950 Msa1111430:intron 40.0%
CAAACGCAACAAATCAGGTT+AGG - chr7_3:57133936-57133955 Msa1111430:intron 40.0%
TAGGACAATAATGCCTTTCG+GGG + chr7_3:57133998-57134017 None:intergenic 40.0%
GAAGTTCAAAAGGAGAAGGA+AGG - chr7_3:57134081-57134100 Msa1111430:CDS 40.0%
ATAAAGAAAACTCGCTCCAC+AGG + chr7_3:57134484-57134503 None:intergenic 40.0%
TAGAGAAAAGGATGGCAAAG+CGG - chr7_3:57134576-57134595 Msa1111430:intron 40.0%
! TCAGTTGATTCAGCAGTTCT+AGG - chr7_3:57134671-57134690 Msa1111430:intron 40.0%
!! AGAATGCTGATTCTACCGTT+CGG - chr7_3:57134729-57134748 Msa1111430:intron 40.0%
GATGCGAGATCAGATCATTA+TGG - chr7_3:57134754-57134773 Msa1111430:CDS 40.0%
GAGATCAGATCATTATGGCT+AGG - chr7_3:57134759-57134778 Msa1111430:CDS 40.0%
TGTACCAAGAACTGCAAACA+CGG - chr7_3:57134822-57134841 Msa1111430:intron 40.0%
CAGAAAATTGTGCATACCTC+TGG + chr7_3:57134901-57134920 None:intergenic 40.0%
AATGGGCCAAGTTCTTTCTA+AGG - chr7_3:57135000-57135019 Msa1111430:CDS 40.0%
CTTTCGCCTTAGAAAGAACT+TGG + chr7_3:57135009-57135028 None:intergenic 40.0%
AAGCACATTCCTTAGTCAGT+TGG - chr7_3:57135117-57135136 Msa1111430:CDS 40.0%
GCAGTGAATTCCATTTGGTA+TGG + chr7_3:57135152-57135171 None:intergenic 40.0%
CGAGGTAGTAATCTATGGTA+AGG + chr7_3:57135186-57135205 None:intergenic 40.0%
!!! GGAACTTTCTCTTTTCAGGT+GGG + chr7_3:57135210-57135229 None:intergenic 40.0%
GTTCCCTATGACTGAGAATT+TGG - chr7_3:57135225-57135244 Msa1111430:intron 40.0%
CTCAACTGTTGTGAATGCAA+AGG - chr7_3:57135315-57135334 Msa1111430:intron 40.0%
GTTGTTGTCTTTGACATTGC+AGG - chr7_3:57135509-57135528 Msa1111430:intron 40.0%
AGGTGAAACACATGCTTTGA+AGG + chr7_3:57135537-57135556 None:intergenic 40.0%
! TAGATTGTAGCTTTACCAGG+AGG + chr7_3:57135612-57135631 None:intergenic 40.0%
ATTCAAGCTGTCTCAAGACT+GGG + chr7_3:57135680-57135699 None:intergenic 40.0%
TGATGACATTGTTGTCCAGA+AGG - chr7_3:57135860-57135879 Msa1111430:intron 40.0%
AACTTTGATCCCAATGCTTG+TGG - chr7_3:57136005-57136024 Msa1111430:intron 40.0%
TTACTGGCATATATCACAGG+TGG - chr7_3:57136081-57136100 Msa1111430:intron 40.0%
ATATCACAGGTGGCAGAATT+TGG - chr7_3:57136091-57136110 Msa1111430:intron 40.0%
AACCAAGGAATCTAGACTGT+TGG + chr7_3:57136307-57136326 None:intergenic 40.0%
AGCATGATTCCCTACAGTTA+GGG + chr7_3:57136347-57136366 None:intergenic 40.0%
! AGAATGAAGACAGGGTACTA+TGG - chr7_3:57136439-57136458 Msa1111430:intron 40.0%
! GACAGGGTACTATGGAAATT+AGG - chr7_3:57136447-57136466 Msa1111430:intron 40.0%
AAATTAGGGACATTACCTCC+AGG - chr7_3:57136462-57136481 Msa1111430:intron 40.0%
AATTAGGGACATTACCTCCA+GGG - chr7_3:57136463-57136482 Msa1111430:intron 40.0%
CAGTCCAAGTATAGATCGTA+CGG - chr7_3:57136551-57136570 Msa1111430:intron 40.0%
ATCTCCGTACGATCTATACT+TGG + chr7_3:57136558-57136577 None:intergenic 40.0%
GCAGCAGTTGTACACTATAA+TGG - chr7_3:57136585-57136604 Msa1111430:intron 40.0%
GTCATTGCTATCTCTAACCA+TGG + chr7_3:57136621-57136640 None:intergenic 40.0%
GGAACTGTAAGCTAAGTGAA+TGG - chr7_3:57136694-57136713 Msa1111430:intron 40.0%
TGTAAGCTAAGTGAATGGTC+TGG - chr7_3:57136699-57136718 Msa1111430:intron 40.0%
TAAAAAGGAGACAGAAGGCT+GGG + chr7_3:57136780-57136799 None:intergenic 40.0%
TTAAAAAGGAGACAGAAGGC+TGG + chr7_3:57136781-57136800 None:intergenic 40.0%
CAGGTTAAAAAGGAGACAGA+AGG + chr7_3:57136785-57136804 None:intergenic 40.0%
! CTTCTGTCTCCTTTTTAACC+TGG - chr7_3:57136783-57136802 Msa1111430:intron 40.0%
!! CAAGCATTGACTCTATCACT+TGG + chr7_3:57136851-57136870 None:intergenic 40.0%
AAAATCAATGGCAATGGCGT+GGG + chr7_3:57136906-57136925 None:intergenic 40.0%
AAAAATCAATGGCAATGGCG+TGG + chr7_3:57136907-57136926 None:intergenic 40.0%
AGAGAGGGTTTATGGCGTAA+TGG + chr7_3:57131731-57131750 None:intergenic 45.0%
AGAGAGAGAGAGAGGGTTTA+TGG + chr7_3:57131739-57131758 None:intergenic 45.0%
AGCGGCATTGTATGTGTGTA+TGG + chr7_3:57131791-57131810 None:intergenic 45.0%
CCGCTTAACAACAGAACCAA+AGG - chr7_3:57131806-57131825 Msa1111430:three_prime_UTR 45.0%
GAAGCGAAGAAGAAGATGAG+AGG + chr7_3:57131881-57131900 None:intergenic 45.0%
! GAGAGAGAGAGAGTATGAAC+CGG + chr7_3:57131933-57131952 None:intergenic 45.0%
TTCGGGAGTAGTGTAGTAGA+AGG - chr7_3:57132070-57132089 Msa1111430:three_prime_UTR 45.0%
! GGTTTGGAGTGATTTGGGAT+AGG - chr7_3:57132276-57132295 Msa1111430:CDS 45.0%
TTGGGATAGGTGACCATTGA+TGG - chr7_3:57132289-57132308 Msa1111430:CDS 45.0%
ATTGGATTTAGATGCTGGGG+TGG - chr7_3:57132362-57132381 Msa1111430:CDS 45.0%
ATCACAGAGAATCCTACCAC+TGG + chr7_3:57132624-57132643 None:intergenic 45.0%
AGATACCCTAGGACTTTGTG+AGG - chr7_3:57132822-57132841 Msa1111430:CDS 45.0%
GCTAACCTCACAAAGTCCTA+GGG + chr7_3:57132830-57132849 None:intergenic 45.0%
TGCTAACCTCACAAAGTCCT+AGG + chr7_3:57132831-57132850 None:intergenic 45.0%
CCATTGTAGCCATTCCCTAT+CGG + chr7_3:57132902-57132921 None:intergenic 45.0%
ATATGTCCCACCACTTTGTG+TGG - chr7_3:57132998-57133017 Msa1111430:CDS 45.0%
TATGTCCCACCACTTTGTGT+GGG - chr7_3:57132999-57133018 Msa1111430:CDS 45.0%
TTGAACCCACACAAAGTGGT+GGG + chr7_3:57133007-57133026 None:intergenic 45.0%
ATTGAACCCACACAAAGTGG+TGG + chr7_3:57133008-57133027 None:intergenic 45.0%
GTTTCGCTCTTGTACTTCCT+CGG - chr7_3:57133204-57133223 Msa1111430:CDS 45.0%
!! CACCAATGAGTTCTAAACCG+AGG + chr7_3:57133224-57133243 None:intergenic 45.0%
GTAATGTCCTTGATGTGAGG+AGG - chr7_3:57133413-57133432 Msa1111430:intron 45.0%
TGCCTTCTGTTCTCTCCATT+TGG + chr7_3:57133683-57133702 None:intergenic 45.0%
TGTCCAGCACGAATGATATG+GGG - chr7_3:57133846-57133865 Msa1111430:CDS 45.0%
TCTGCTTCTTGGAGAGTTGT+TGG - chr7_3:57133902-57133921 Msa1111430:intron 45.0%
CTGCTTCTTGGAGAGTTGTT+GGG - chr7_3:57133903-57133922 Msa1111430:intron 45.0%
! AAGTTTGATTTCCCCCCGAA+AGG - chr7_3:57133982-57134001 Msa1111430:CDS 45.0%
AGGACAATAATGCCTTTCGG+GGG + chr7_3:57133997-57134016 None:intergenic 45.0%
GAGAAGGAAGGAAGATCTTC+AGG - chr7_3:57134093-57134112 Msa1111430:CDS 45.0%
AAGAATGATGCTCACCCTTC+TGG + chr7_3:57134234-57134253 None:intergenic 45.0%
AGAAGGGTGAGCATCATTCT+TGG - chr7_3:57134233-57134252 Msa1111430:CDS 45.0%
AGAGAAAAGGATGGCAAAGC+GGG - chr7_3:57134577-57134596 Msa1111430:intron 45.0%
TAAGCCGTGTTTGCAGTTCT+TGG + chr7_3:57134829-57134848 None:intergenic 45.0%
AAAGAGAGTCAGCGTGCTTT+AGG - chr7_3:57134848-57134867 Msa1111430:intron 45.0%
ATTGTGCATACCTCTGGTGT+AGG + chr7_3:57134895-57134914 None:intergenic 45.0%
TGGGACGAGGTAGTAATCTA+TGG + chr7_3:57135191-57135210 None:intergenic 45.0%
!! GGGAACTTTCTCTTTTCAGG+TGG + chr7_3:57135211-57135230 None:intergenic 45.0%
ACTGTTGCAAGCAAAACACG+TGG + chr7_3:57135432-57135451 None:intergenic 45.0%
GATTCAAGCTGTCTCAAGAC+TGG + chr7_3:57135681-57135700 None:intergenic 45.0%
!! TAGAAGCACCAGTAGTGGAT+GGG + chr7_3:57135740-57135759 None:intergenic 45.0%
!! TTAGAAGCACCAGTAGTGGA+TGG + chr7_3:57135741-57135760 None:intergenic 45.0%
!! GAGATTAGAAGCACCAGTAG+TGG + chr7_3:57135745-57135764 None:intergenic 45.0%
TTTCAATGCTCAACCACCTG+AGG - chr7_3:57135787-57135806 Msa1111430:intron 45.0%
CTTGTGGAAGATAGAACCTC+AGG + chr7_3:57135806-57135825 None:intergenic 45.0%
GTTGTCCAGAAGGATTTGAC+TGG - chr7_3:57135870-57135889 Msa1111430:intron 45.0%
AACGGTGCAGTTGAAACATG+TGG - chr7_3:57135924-57135943 Msa1111430:intron 45.0%
TTGATCCCAATGCTTGTGGT+TGG - chr7_3:57136009-57136028 Msa1111430:intron 45.0%
TGATCCCAATGCTTGTGGTT+GGG - chr7_3:57136010-57136029 Msa1111430:intron 45.0%
TATGCCCAACCACAAGCATT+GGG + chr7_3:57136017-57136036 None:intergenic 45.0%
AATGCTTGTGGTTGGGCATA+CGG - chr7_3:57136017-57136036 Msa1111430:intron 45.0%
CAACCACGAATCTCGAATCT+CGG - chr7_3:57136196-57136215 Msa1111430:intron 45.0%
AGCCAACAGTCTAGATTCCT+TGG - chr7_3:57136302-57136321 Msa1111430:intron 45.0%
AGTCTAGATTCCTTGGTTGC+AGG - chr7_3:57136309-57136328 Msa1111430:intron 45.0%
GAGCATGATTCCCTACAGTT+AGG + chr7_3:57136348-57136367 None:intergenic 45.0%
TAGAATGTCATTAGCCCTGG+AGG + chr7_3:57136480-57136499 None:intergenic 45.0%
CCATAGAATGTCATTAGCCC+TGG + chr7_3:57136483-57136502 None:intergenic 45.0%
CCAGGGCTAATGACATTCTA+TGG - chr7_3:57136480-57136499 Msa1111430:intron 45.0%
ATCATGGCATGTACTCGGTT+TGG - chr7_3:57136524-57136543 Msa1111430:intron 45.0%
TCATGGCATGTACTCGGTTT+GGG - chr7_3:57136525-57136544 Msa1111430:intron 45.0%
CTGGGGTATGTATATTCTGG+AGG + chr7_3:57136762-57136781 None:intergenic 45.0%
AGGCTGGGGTATGTATATTC+TGG + chr7_3:57136765-57136784 None:intergenic 45.0%
AAAAAGGAGACAGAAGGCTG+GGG + chr7_3:57136779-57136798 None:intergenic 45.0%
GTATACTCTGATGCTACGGA+TGG - chr7_3:57137023-57137042 Msa1111430:CDS 45.0%
ACTGCAAGAAAGCTACTTGG+AGG + chr7_3:57137129-57137148 None:intergenic 45.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr7_3:57131746-57131765 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr7_3:57131745-57131764 None:intergenic 50.0%
ATTGCGGAATGACCTACCAG+TGG - chr7_3:57132605-57132624 Msa1111430:intron 50.0%
CAGAGAATCCTACCACTGGT+AGG + chr7_3:57132620-57132639 None:intergenic 50.0%
TTCAGCAGTGGCAGTTGTCA+CGG - chr7_3:57132670-57132689 Msa1111430:intron 50.0%
!! CAGTATATCGGATAGCGGGA+TGG + chr7_3:57132709-57132728 None:intergenic 50.0%
CCGATAGGGAATGGCTACAA+TGG - chr7_3:57132899-57132918 Msa1111430:CDS 50.0%
CAAGAGCGAAACAGCAACAG+AGG + chr7_3:57133196-57133215 None:intergenic 50.0%
CTCCGATGTTACAAGCCAAC+AGG - chr7_3:57133558-57133577 Msa1111430:CDS 50.0%
CTGCAACAGCCAACGACATA+GGG + chr7_3:57133656-57133675 None:intergenic 50.0%
! CAGCTTGTGCTTGCCTCTTT+TGG + chr7_3:57133730-57133749 None:intergenic 50.0%
GGACAATAATGCCTTTCGGG+GGG + chr7_3:57133996-57134015 None:intergenic 50.0%
!! AGTGGACTGATAGTCCCGTA+AGG - chr7_3:57134204-57134223 Msa1111430:CDS 50.0%
CTGATCTCGCATCAACCGAA+CGG + chr7_3:57134747-57134766 None:intergenic 50.0%
GCTACAAACTGCTGATGAGC+AGG - chr7_3:57135075-57135094 Msa1111430:intron 50.0%
ACTGCTGATGAGCAGGTTAG+AGG - chr7_3:57135082-57135101 Msa1111430:intron 50.0%
TCTTGGCAGCCAACTGACTA+AGG + chr7_3:57135129-57135148 None:intergenic 50.0%
GCTGCCAAGACCATACCAAA+TGG - chr7_3:57135139-57135158 Msa1111430:CDS 50.0%
!!! TTCTCTTTTCAGGTGGGACG+AGG + chr7_3:57135204-57135223 None:intergenic 50.0%
GTGGAAGATAGAACCTCAGG+TGG + chr7_3:57135803-57135822 None:intergenic 50.0%
GTATGCCCAACCACAAGCAT+TGG + chr7_3:57136018-57136037 None:intergenic 50.0%
TGGTTGCGTGCAGTACTATG+TGG + chr7_3:57136182-57136201 None:intergenic 50.0%
GAATCTCGAATCTCGGCTGT+TGG - chr7_3:57136203-57136222 Msa1111430:intron 50.0%
! ACTGTTGGCTGAGGATCAGA+CGG + chr7_3:57136292-57136311 None:intergenic 50.0%
! GGAATCTAGACTGTTGGCTG+AGG + chr7_3:57136301-57136320 None:intergenic 50.0%
TGTGTGCTTGCCCTAACTGT+AGG - chr7_3:57136334-57136353 Msa1111430:intron 50.0%
GTGTGCTTGCCCTAACTGTA+GGG - chr7_3:57136335-57136354 Msa1111430:intron 50.0%
GCACTTCACTTGAGATTGCC+AGG + chr7_3:57136804-57136823 None:intergenic 50.0%
GGATAGAGATGGCGAAGCAA+GGG + chr7_3:57136885-57136904 None:intergenic 50.0%
CGGAATGACCTACCAGTGGT+AGG - chr7_3:57132609-57132628 Msa1111430:intron 55.0%
! TGAAGGCGAGCTGGCTCATA+GGG + chr7_3:57132654-57132673 None:intergenic 55.0%
GTGACAACTGCCACTGCTGA+AGG + chr7_3:57132671-57132690 None:intergenic 55.0%
GTTGTCACGGTCGCGAATTG+TGG - chr7_3:57132683-57132702 Msa1111430:intron 55.0%
TGGGAACAGCCGATAGGGAA+TGG - chr7_3:57132890-57132909 Msa1111430:CDS 55.0%
CCTGCAACAGCCAACGACAT+AGG + chr7_3:57133657-57133676 None:intergenic 55.0%
! CCTATGTCGTTGGCTGTTGC+AGG - chr7_3:57133654-57133673 Msa1111430:CDS 55.0%
GGCTGTTGCAGGCTACCAAA+TGG - chr7_3:57133665-57133684 Msa1111430:CDS 55.0%
AGGCCCCATATCATTCGTGC+TGG + chr7_3:57133852-57133871 None:intergenic 55.0%
ATGCAGCAGGTCTTCCTCAG+TGG - chr7_3:57134186-57134205 Msa1111430:CDS 55.0%
ACGGGACTATCAGTCCACTG+AGG + chr7_3:57134203-57134222 None:intergenic 55.0%
! TCCCGTAAGGCTAGCCAGAA+GGG - chr7_3:57134217-57134236 Msa1111430:CDS 55.0%
!! ACCCTTCTGGCTAGCCTTAC+GGG + chr7_3:57134221-57134240 None:intergenic 55.0%
!! CACCCTTCTGGCTAGCCTTA+CGG + chr7_3:57134222-57134241 None:intergenic 55.0%
!! GGCTGCTGAGTTGGTACAAC+AGG - chr7_3:57134598-57134617 Msa1111430:intron 55.0%
! GAGTCAGCGTGCTTTAGGTG+AGG - chr7_3:57134853-57134872 Msa1111430:intron 55.0%
CTGATGCTGACCTACACCAG+AGG - chr7_3:57134882-57134901 Msa1111430:intron 55.0%
!! AAGCACCAGTAGTGGATGGG+TGG + chr7_3:57135737-57135756 None:intergenic 55.0%
CAGCCGAGATTCGAGATTCG+TGG + chr7_3:57136202-57136221 None:intergenic 55.0%
AGCACACAGTCCTGCAACCA+AGG + chr7_3:57136322-57136341 None:intergenic 55.0%
GGGATAGAGATGGCGAAGCA+AGG + chr7_3:57136886-57136905 None:intergenic 55.0%
GCAATGGCGTGGGATAGAGA+TGG + chr7_3:57136896-57136915 None:intergenic 55.0%
! CGAGCTGGCTCATAGGGAGA+TGG + chr7_3:57132648-57132667 None:intergenic 60.0%
! CTGAAGGCGAGCTGGCTCAT+AGG + chr7_3:57132655-57132674 None:intergenic 60.0%
GGCACGACACGTCGCTATCT+GGG - chr7_3:57132749-57132768 Msa1111430:CDS 60.0%
! GTCCCGTAAGGCTAGCCAGA+AGG - chr7_3:57134216-57134235 Msa1111430:CDS 60.0%
AGCCAGCTCGCCTTCAGCAG+TGG - chr7_3:57132658-57132677 Msa1111430:intron 65.0%
TGCCACTGCTGAAGGCGAGC+TGG + chr7_3:57132663-57132682 None:intergenic 65.0%
CGGCACGACACGTCGCTATC+TGG - chr7_3:57132748-57132767 Msa1111430:intron 65.0%
!! GGCAAAGCGGGCTGCTGAGT+TGG - chr7_3:57134589-57134608 Msa1111430:intron 65.0%
GCAGGCCACCCATCCACTAC+TGG - chr7_3:57135729-57135748 Msa1111430:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 57131649 57137212 57131649 ID=Msa1111430;Name=Msa1111430
chr7_3 mRNA 57131649 57137212 57131649 ID=Msa1111430-mRNA-1;Parent=Msa1111430;Name=Msa1111430-mRNA-1;_AED=0.04;_eAED=0.05;_QI=154|0.77|0.8|1|0.77|0.8|10|487|695
chr7_3 exon 57131649 57132420 57131649 ID=Msa1111430-mRNA-1:exon:12210;Parent=Msa1111430-mRNA-1
chr7_3 exon 57132749 57133330 57132749 ID=Msa1111430-mRNA-1:exon:12209;Parent=Msa1111430-mRNA-1
chr7_3 exon 57133525 57133882 57133525 ID=Msa1111430-mRNA-1:exon:12208;Parent=Msa1111430-mRNA-1
chr7_3 exon 57133958 57134292 57133958 ID=Msa1111430-mRNA-1:exon:12207;Parent=Msa1111430-mRNA-1
chr7_3 exon 57134623 57134669 57134623 ID=Msa1111430-mRNA-1:exon:12206;Parent=Msa1111430-mRNA-1
chr7_3 exon 57134747 57134810 57134747 ID=Msa1111430-mRNA-1:exon:12205;Parent=Msa1111430-mRNA-1
chr7_3 exon 57134909 57135031 57134909 ID=Msa1111430-mRNA-1:exon:12204;Parent=Msa1111430-mRNA-1
chr7_3 exon 57135089 57135185 57135089 ID=Msa1111430-mRNA-1:exon:12203;Parent=Msa1111430-mRNA-1
chr7_3 exon 57135250 57135316 57135250 ID=Msa1111430-mRNA-1:exon:12202;Parent=Msa1111430-mRNA-1
chr7_3 exon 57136929 57137212 57136929 ID=Msa1111430-mRNA-1:exon:12201;Parent=Msa1111430-mRNA-1
chr7_3 five_prime_UTR 57137059 57137212 57137059 ID=Msa1111430-mRNA-1:five_prime_utr;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57136929 57137058 57136929 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57135250 57135316 57135250 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57135089 57135185 57135089 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57134909 57135031 57134909 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57134747 57134810 57134747 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57134623 57134669 57134623 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57133958 57134292 57133958 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57133525 57133882 57133525 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57132749 57133330 57132749 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 CDS 57132136 57132420 57132136 ID=Msa1111430-mRNA-1:cds;Parent=Msa1111430-mRNA-1
chr7_3 three_prime_UTR 57131649 57132135 57131649 ID=Msa1111430-mRNA-1:three_prime_utr;Parent=Msa1111430-mRNA-1
Gene Sequence

>Msa1111430

ATGCCGCTTAACAACAGAACCAAAGGAGGATCTTCTTTTCCTCTTCTCGCTTTTGTTCTTCTCTGTCTTCTCGCTCCTCTCATCTTCTTCTTCGCTTCATCTCTTCACACTTCTTCTTCTTCTTCTTCCGATCACAATGATATCTCCGATGTTACAAGCCAACAGGTAGCTCGTTTTATACATTTTCAGGTTCATTGGCTACCAAATGGAGAGAACAGAAGGCACTACACGACCTTAAATCTCTTTTTCCAAAAGAGGCAAGCACAAGCTGACATCACTCTTGTTTTGTCTTTCGTTCTTGATGTTATTATGTCCAGCACGAATGATATGGGGCCTTTGAGTCTAGAAAATTTCCGAAATAATCTTTCTGCTTCTTGGAGAGTTGTTGGGTCAAAGACTTCAAACGCAACAAATCAGCTAAACAACCCAGAAACACATCTTAGACAAGAAGTTCAAAAGGAGAAGGAAGGAAGATCTTCAGCAGGTCTTCCTCAGTGGACTGATAGTCCCGTAAGGCTAGCCAGAAGGCAATTAATAGAGAAAAGGATGGCAAAGCGGGCTGCTGAGTTGGTACAACAGGATGATGAAGTTATTGTAAAACTTGAAGATTTAGCTATTGAACGTTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACCTTTGGAGGAAAGAAAATGAAAATGAGAATGCTGATTCTACCGTTCGGTTGATGCGAGATCAGATCATTATGGCTAGGGTATACTTGAGTATTGCAAAGATGAAGAACAAGCTTGAATTGTACCAAGAACTGCAAACACGGCTTAAAGAGAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGACCTACACCAGAGTGAACATGAAAAAATCAAAGCAATGGGCCAAGTTCTTTCTAAGGCGAAAGATCAATTGTATGACTGCAAGTTGGTTATTGGGAAAGTAAGGGCAATGCTACAAACTGCTGATGAGCAGGTTAGAGGCTTGAAGAAACAAAGCACATTCCTTAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCACTGCTTATCGATGCGCCTTACCATAGATTACTACCTCGTCCCACCTGAAAAGAGAAAGTTCCCTATGACTGAGAATTTGGTTAATCCCAGTCTTTATCATTATGCCCTATTCTCAGACAATGTTTTGGCTGCATCTGTTGTTGTCAACTCAACTGTTGTGAATGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAATATGTGGTTTTTATTGAATCCTCCTGGTAAAGCTACAATCTATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCTTACTGCCCAGTCTTGAGACAGCTTGAATCTGCGACAATGAAAGAGTATTATTTCAAGGCAGGCCACCCATCCACTACTGGTGCTTCTAATCTCAAATACAGAAATCCAAAGTATCTTTCAATGCTCAACCACCTGAGGTTCTATCTTCCACAAGTTTATCCGAAATTGGATAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGAATGTGGATCTTCATGGAAAAGTTAACGGTGCAGTTGAAACATGTGGTGAGAGCTTTCACCGATTCGACAAATATCTTAACTTTTCAAATCCACATATTGCAAAAAACTTTGATCCCAATGCTTGTGGTTGGGCATACGGAATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAGGACATTACTGGCATATATCACAGGTGGCAGAATTTGAATGAAGACAGGGTACTATGGAAATTAGGGACATTACCTCCAGGGCTAATGACATTCTATGGATTAACACATCCGCTAAATAAATCATGGCATGTACTCGGTTTGGGTTACAGTCCAAGTATAGATCGTACGGAGATTGAGAATGCAGCAGTTGTACACTATAATGGTAATATGAAGCCATGGTTAGAGATAGCAATGACAAAGTATCGTCCTTACTGGACCAAATATGTCAAGTATAACCATCCTTATCTTAGGAACTGTAAGCTAAGTGAATGGTCTGGATAA
Protein sequence

>Msa1111430

MPLNNRTKGGSSFPLLAFVLLCLLAPLIFFFASSLHTSSSSSSDHNDISDVTSQQVARFIHFQVHWLPNGENRRHYTTLNLFFQKRQAQADITLVLSFVLDVIMSSTNDMGPLSLENFRNNLSASWRVVGSKTSNATNQLNNPETHLRQEVQKEKEGRSSAGLPQWTDSPVRLARRQLIEKRMAKRAAELVQQDDEVIVKLEDLAIERSKSVDSAVLGKYNLWRKENENENADSTVRLMRDQIIMARVYLSIAKMKNKLELYQELQTRLKESQRALGEATSDADLHQSEHEKIKAMGQVLSKAKDQLYDCKLVIGKVRAMLQTADEQVRGLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLVPPEKRKFPMTENLVNPSLYHYALFSDNVLAASVVVNSTVVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIYVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPSTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWNVDLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNCKLSEWSG*