AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1065890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1065890 MtrunA17_Chr7g0246371 97.349 679 6 3 1 679 1 667 0.0 1361
Msa1065890 MtrunA17_Chr8g0351091 82.645 605 103 1 74 676 8 612 0.0 1060
Msa1065890 MtrunA17_Chr3g0138381 59.473 607 230 4 84 674 57 663 0.0 734
Msa1065890 MtrunA17_Chr2g0290961 59.766 512 201 3 164 675 160 666 0.0 654
Msa1065890 MtrunA17_Chr8g0383241 58.333 468 190 1 209 676 29 491 0.0 596
Msa1065890 MtrunA17_Chr2g0283461 48.069 466 233 5 215 674 70 532 7.78e-163 478
Msa1065890 MtrunA17_Chr7g0235161 57.421 411 169 4 269 675 151 559 8.15e-158 466
Msa1065890 MtrunA17_Chr4g0061711 46.667 495 245 7 190 675 51 535 3.20e-157 464
Msa1065890 MtrunA17_Chr2g0308241 47.312 465 237 5 215 674 73 534 2.61e-156 462
Msa1065890 MtrunA17_Chr7g0260711 47.186 462 216 3 216 674 216 652 2.83e-153 458
Msa1065890 MtrunA17_Chr6g0456071 48.408 471 223 8 224 675 85 554 5.27e-147 439
Msa1065890 MtrunA17_Chr1g0184751 43.710 469 232 7 211 674 156 597 7.76e-135 409
Msa1065890 MtrunA17_Chr2g0277591 42.918 466 233 6 215 674 70 508 2.45e-134 404
Msa1065890 MtrunA17_Chr7g0218571 42.727 440 216 8 261 676 110 537 9.07e-121 370
Msa1065890 MtrunA17_Chr2g0319311 41.346 416 225 5 278 674 124 539 1.40e-113 352
Msa1065890 MtrunA17_Chr6g0454101 41.915 470 237 7 241 676 65 532 2.56e-112 348
Msa1065890 MtrunA17_Chr4g0076011 40.201 398 210 5 305 674 74 471 1.30e-101 318
Msa1065890 MtrunA17_Chr3g0097091 38.688 442 235 11 255 674 101 528 9.52e-96 305
Msa1065890 MtrunA17_Chr7g0245621 34.369 483 287 6 202 675 183 644 3.60e-83 275
Msa1065890 MtrunA17_Chr4g0076331 57.286 199 55 3 479 674 1 172 2.43e-67 218
Msa1065890 MtrunA17_Chr6g0451981 24.776 335 201 12 353 666 64 368 6.08e-21 95.5
Msa1065890 MtrunA17_Chr7g0269751 29.231 195 130 4 480 666 159 353 8.14e-20 91.7
Msa1065890 MtrunA17_Chr4g0066331 26.482 253 151 7 431 649 69 320 1.13e-19 91.3
Msa1065890 MtrunA17_Chr7g0259321 29.714 175 118 3 480 649 151 325 1.23e-19 91.3
Msa1065890 MtrunA17_Chr3g0127611 29.648 199 124 5 480 666 140 334 1.87e-19 90.5
Msa1065890 MtrunA17_Chr3g0141321 26.768 198 136 5 480 668 139 336 1.39e-17 84.7
Msa1065890 MtrunA17_Chr5g0414981 24.242 330 203 12 350 664 76 373 4.29e-17 84.3
Msa1065890 MtrunA17_Chr8g0373671 27.461 193 129 5 480 661 142 334 7.71e-17 82.4
Msa1065890 MtrunA17_Chr1g0154521 28.141 199 133 5 480 668 165 363 9.06e-17 82.8
Msa1065890 MtrunA17_Chr5g0403501 27.778 198 134 5 480 668 166 363 3.63e-15 77.8
Msa1065890 MtrunA17_Chr1g0196511 29.143 175 119 3 480 649 154 328 6.02e-14 73.9
Msa1065890 MtrunA17_Chr4g0076341 40.244 82 44 1 217 298 16 92 2.83e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1065890 AT3G61130.1 72.511 673 167 6 7 676 16 673 0.0 1013
Msa1065890 AT4G38270.1 63.019 530 190 2 153 676 151 680 0.0 724
Msa1065890 AT4G38270.2 63.019 530 190 2 153 676 147 676 0.0 724
Msa1065890 AT2G46480.3 60.377 530 203 4 150 676 15 540 0.0 674
Msa1065890 AT2G46480.4 60.377 530 203 4 150 676 28 553 0.0 673
Msa1065890 AT5G47780.1 64.052 459 163 1 217 675 159 615 0.0 648
Msa1065890 AT2G46480.2 57.197 528 194 5 152 676 17 515 0.0 618
Msa1065890 AT2G46480.1 56.981 530 196 5 150 676 28 528 0.0 618
Msa1065890 AT3G25140.1 55.658 433 179 6 254 675 128 558 6.70e-168 493
Msa1065890 AT1G18580.1 48.614 469 229 4 212 672 70 534 3.81e-163 480
Msa1065890 AT2G20810.1 47.957 465 231 7 218 674 74 535 8.48e-152 451
Msa1065890 AT3G02350.1 52.174 437 201 5 246 675 125 560 3.25e-149 445
Msa1065890 AT2G30575.1 44.181 464 232 3 216 676 171 610 1.95e-142 429
Msa1065890 AT1G06780.1 44.372 462 231 2 216 674 149 587 5.73e-140 422
Msa1065890 AT1G06780.2 44.372 462 231 2 216 674 162 600 1.01e-139 422
Msa1065890 AT3G01040.2 45.215 418 210 5 278 676 115 532 1.64e-118 365
Msa1065890 AT3G01040.3 45.215 418 210 5 278 676 115 532 1.64e-118 365
Msa1065890 AT5G15470.1 45.673 416 207 5 280 676 117 532 1.91e-117 362
Msa1065890 AT5G54690.1 38.753 449 244 7 245 674 96 532 2.93e-110 343
Msa1065890 AT3G01040.1 42.344 418 189 6 278 676 115 499 7.69e-103 323
Msa1065890 AT2G38650.2 36.402 478 277 7 202 674 162 617 2.07e-98 315
Msa1065890 AT2G38650.1 36.402 478 277 7 202 674 162 617 2.07e-98 315
Msa1065890 AT3G58790.2 38.366 404 223 8 293 674 7 406 2.53e-88 282
Msa1065890 AT3G58790.1 36.364 462 257 10 243 674 84 538 2.56e-88 286
Msa1065890 AT2G38650.3 37.143 385 216 6 202 582 162 524 4.22e-76 254
Msa1065890 AT3G06260.1 30.857 175 116 3 480 649 150 324 3.83e-21 95.9
Msa1065890 AT4G02130.3 28.205 195 132 4 480 666 150 344 2.35e-20 93.6
Msa1065890 AT4G02130.1 28.205 195 132 4 480 666 150 344 2.35e-20 93.6
Msa1065890 AT4G02130.2 28.205 195 132 4 480 666 150 344 2.35e-20 93.6
Msa1065890 AT1G70090.1 28.571 196 131 5 480 666 169 364 3.91e-19 90.5
Msa1065890 AT1G70090.2 28.571 196 131 5 480 666 169 364 3.91e-19 90.5
Msa1065890 AT3G62660.1 27.179 195 134 4 480 666 164 358 8.08e-19 89.4
Msa1065890 AT1G02720.1 28.718 195 131 4 480 666 165 359 1.18e-18 88.6
Msa1065890 AT1G02720.2 28.718 195 131 4 480 666 165 359 1.18e-18 88.6
Msa1065890 AT3G28340.1 28.351 194 129 6 478 661 153 346 2.02e-18 88.2
Msa1065890 AT1G19300.1 27.778 198 134 5 480 668 150 347 1.88e-17 85.1
Msa1065890 AT1G24170.1 23.913 322 192 10 363 666 81 367 1.99e-16 82.4
Msa1065890 AT3G50760.1 26.396 197 136 4 478 665 134 330 5.14e-15 77.4
Msa1065890 AT1G13250.1 25.424 295 180 9 363 649 56 318 8.84e-13 70.9

Find 183 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTACTGATAAACTAAATTT+TGG 0.147550 7_2:-59801156 Msa1065890:CDS
CAGCTTGTGCTTACCTCTTT+TGG 0.165480 7_2:+59802985 None:intergenic
TCTTGTCTAAGATGTGTTTC+TGG 0.168293 7_2:+59802653 None:intergenic
GTTCCCTATGACTGAGAATT+TGG 0.196098 7_2:-59801488 Msa1065890:CDS
TCCACAAGTTTATCCGAAAT+TGG 0.201752 7_2:-59800896 Msa1065890:CDS
GAAATAATCTTTCTGCTTCT+TGG 0.205764 7_2:-59802821 Msa1065890:CDS
AGAGAGAGAAAGAGGGTTTA+TGG 0.225889 7_2:+59804922 None:intergenic
GACAGGGTACTATGGAAATT+AGG 0.250416 7_2:-59800267 Msa1065890:CDS
TAAGCCGTGTTTGCAGTTCT+TGG 0.267033 7_2:+59801887 None:intergenic
TTGAGATTGCCAGGTTAAAA+AGG 0.272840 7_2:+59799922 None:intergenic
ATATCACAGGTGGCAGAATT+TGG 0.278377 7_2:-59800623 Msa1065890:intron
AGAAGGATTTGACTGGATTA+TGG 0.290586 7_2:-59800837 Msa1065890:CDS
ACCCTTCTGGCTAGCCTTAC+GGG 0.301649 7_2:+59802495 None:intergenic
AAAAGAATCTTATCCAATTT+CGG 0.301889 7_2:+59800883 None:intergenic
AAAGAGAGTCAGCGTGCTTT+AGG 0.304821 7_2:-59801865 Msa1065890:CDS
ATGGTTATACTTGACATATT+TGG 0.307908 7_2:+59800053 None:intergenic
CTGCTTCTTGGAGAGTTGTT+GGG 0.314790 7_2:-59802809 Msa1065890:CDS
GAGAAGGAAGGAAGATCTTC+AGG 0.324973 7_2:-59802620 Msa1065890:intron
CCAGGGCTAATGACATTCTA+TGG 0.326202 7_2:-59800234 Msa1065890:CDS
TCAGTTGATTCAGCAGTTCT+AGG 0.328896 7_2:-59802042 Msa1065890:CDS
TCTGCTTCTTGGAGAGTTGT+TGG 0.331359 7_2:-59802810 Msa1065890:CDS
CACCCTTCTGGCTAGCCTTA+CGG 0.339727 7_2:+59802494 None:intergenic
CCTATTCTCAGACAATGTTT+TGG 0.343893 7_2:-59801440 Msa1065890:CDS
TGACAAAGTATCGTCCTTAC+TGG 0.346721 7_2:-59800077 Msa1065890:CDS
AATGGGCCAAGTTCTTTCTA+AGG 0.347501 7_2:-59801713 Msa1065890:CDS
CAAAACATTGTCTGAGAATA+GGG 0.349585 7_2:+59801441 None:intergenic
TCATGGCATGTACTCGGTTT+GGG 0.356589 7_2:-59800189 Msa1065890:CDS
ATCATGGCATGTACTCGGTT+TGG 0.363039 7_2:-59800190 Msa1065890:CDS
TGCCTTCTGTTCTCTCCATT+TGG 0.363246 7_2:+59803032 None:intergenic
TATGTCCAGCACGAATGATA+TGG 0.364399 7_2:-59802868 Msa1065890:CDS
TCAGAAGTAGCTTTCTTGTA+TGG 0.364711 7_2:-59799633 Msa1065890:three_prime_UTR
AAGAAGCAGAAAGATTATTT+CGG 0.364907 7_2:+59802823 None:intergenic
AGTATAACCATCCTTATCTT+AGG 0.371790 7_2:-59800041 Msa1065890:CDS
CTTGTCTAAGATGTGTTTCT+GGG 0.373678 7_2:+59802654 None:intergenic
TTAACCAAATTCTCAGTCAT+AGG 0.376964 7_2:+59801484 None:intergenic
CCAAAACATTGTCTGAGAAT+AGG 0.379751 7_2:+59801440 None:intergenic
TGTTCTTTGTACTTAGGAAT+TGG 0.386136 7_2:+59799986 None:intergenic
TTCTAGGTAAATACAACCTT+TGG 0.386455 7_2:-59802026 Msa1065890:CDS
CTTTCGCCTTAGAAAGAACT+TGG 0.387580 7_2:+59801707 None:intergenic
TGGGAGGAGGTAGTAATCTA+TGG 0.391808 7_2:+59801525 None:intergenic
AAAGAGTGTTCTTTGTACTT+AGG 0.396075 7_2:+59799980 None:intergenic
AAGAATGATGCTCACCCTTC+TGG 0.396798 7_2:+59802482 None:intergenic
ACAGGGTACTATGGAAATTA+GGG 0.397082 7_2:-59800266 Msa1065890:CDS
AATGAACATGTTTGATTTGA+AGG 0.399962 7_2:-59800674 Msa1065890:CDS
GTCATTGCTATCTCTAACCA+TGG 0.402027 7_2:+59800096 None:intergenic
GCAGCAGTTGTACACTATAA+TGG 0.404766 7_2:-59800129 Msa1065890:CDS
ACTGCTGATGAGCAGGTTAG+AGG 0.405243 7_2:-59801631 Msa1065890:CDS
GGCTGCTGAGTTGGTACAAC+AGG 0.408103 7_2:-59802115 Msa1065890:CDS
AATGAAAGAGTATTATTTCA+AGG 0.412072 7_2:-59801007 Msa1065890:CDS
AGGCTGGGGTATGTATATTC+TGG 0.412941 7_2:+59799952 None:intergenic
TTGAGCATTGAAAGATACTT+TGG 0.416508 7_2:+59800937 None:intergenic
AGTTGGTCATTGGGAAAGTA+AGG 0.419193 7_2:-59801666 Msa1065890:CDS
AGAATGAAGACAGGGTACTA+TGG 0.423957 7_2:-59800275 Msa1065890:CDS
TTCAGCGTTAATCATGGAAT+CGG 0.429604 7_2:-59804964 Msa1065890:five_prime_UTR
TGCACTTTCAGCGTTAATCA+TGG 0.432330 7_2:-59804970 Msa1065890:five_prime_UTR
ATAATCCAGTCAAATCCTTC+TGG 0.433499 7_2:+59800839 None:intergenic
GACTTCAAACGCAACAAATC+AGG 0.442440 7_2:-59802781 Msa1065890:intron
AATTGAGAAGAGAGAGAAAG+AGG 0.445793 7_2:+59804914 None:intergenic
AGCTTACAGTTCCTAAGATA+AGG 0.446048 7_2:+59800030 None:intergenic
TGATCCCAATGCTTGTGGTT+GGG 0.448672 7_2:-59800704 Msa1065890:CDS
GCACTTCACTTGAGATTGCC+AGG 0.449730 7_2:+59799913 None:intergenic
GATTCAAGCTGTCTCAAGAC+TGG 0.449905 7_2:+59801036 None:intergenic
TATGACTGCAAGTTGGTCAT+TGG 0.451408 7_2:-59801676 Msa1065890:CDS
AGTTAAGATATTTGTCGAAT+CGG 0.454272 7_2:+59800755 None:intergenic
AGGAAAAGAAGATCCTCCTT+TGG 0.456132 7_2:+59804852 None:intergenic
GATAAGCAGTGAATTCCATT+TGG 0.456313 7_2:+59801559 None:intergenic
GATGCGAGATCAGATCATTA+TGG 0.457993 7_2:-59801959 Msa1065890:CDS
ACATGCCATGATTTATTTAG+CGG 0.458664 7_2:+59800201 None:intergenic
AATTCCATTTGGTATGGTCT+TGG 0.460571 7_2:+59801570 None:intergenic
AATGCTTGTGGTTGGGCATA+CGG 0.463683 7_2:-59800697 Msa1065890:CDS
AGGTGAAACACATGCTTTGA+AGG 0.468782 7_2:+59801180 None:intergenic
ATGTCCAGCACGAATGATAT+GGG 0.468872 7_2:-59802867 Msa1065890:CDS
AGATCATAGAAGATTTAGAT+TGG 0.468955 7_2:-59805010 None:intergenic
TTGACATATTTGGTCCAGTA+AGG 0.471463 7_2:+59800063 None:intergenic
AAAGAGTATTATTTCAAGGC+AGG 0.473099 7_2:-59801003 Msa1065890:CDS
TAGGTAAATACAACCTTTGG+AGG 0.475012 7_2:-59802023 Msa1065890:CDS
TTGTCTCAAATTAGTGAGAA+TGG 0.475535 7_2:+59799760 None:intergenic
AGAGAAAAGGATGGCAAAGC+GGG 0.478274 7_2:-59802136 Msa1065890:CDS
TGCAGCAATTAATAGAGAAA+AGG 0.478481 7_2:-59802149 Msa1065890:intron
TTATGGAATGTGGATCTTCA+TGG 0.483883 7_2:-59800820 Msa1065890:CDS
TCCAATTTCGGATAAACTTG+TGG 0.484620 7_2:+59800895 None:intergenic
ATTGAGAAGAGAGAGAAAGA+GGG 0.486992 7_2:+59804915 None:intergenic
GATCTTCATGGAAAAGTTAA+CGG 0.487784 7_2:-59800808 Msa1065890:CDS
CACATCCGCTAAATAAATCA+TGG 0.490767 7_2:-59800206 Msa1065890:CDS
CTCCGATGTTACAAGCCAAC+GGG 0.490954 7_2:-59803154 Msa1065890:CDS
TTTGATTTCAGAATGAAGAC+AGG 0.492079 7_2:-59800284 Msa1065890:intron
GGCAAAGCGGGCTGCTGAGT+TGG 0.492938 7_2:-59802124 Msa1065890:CDS
GCTACAAACTGCTGATGAGC+AGG 0.495112 7_2:-59801638 Msa1065890:CDS
AGCGGCATTGTATGTGTGTA+TGG 0.498221 7_2:+59804886 None:intergenic
AAAGAGGGTTTATGGCGTAA+TGG 0.498421 7_2:+59804930 None:intergenic
TCTTGGCAGCCAACTGACTA+AGG 0.499672 7_2:+59801587 None:intergenic
TATGCCCAACCACAAGCATT+GGG 0.502397 7_2:+59800700 None:intergenic
CCATAGAATGTCATTAGCCC+TGG 0.504949 7_2:+59800234 None:intergenic
TAGGGCATAATGATAAAGAC+TGG 0.506359 7_2:+59801459 None:intergenic
ATAACTGCAAGAAAGCTACT+TGG 0.509296 7_2:+59799585 None:intergenic
TCTTAGACAAGAAGTTCAAA+AGG 0.513227 7_2:-59802642 Msa1065890:CDS
GCAGGCCACCCATCCACTAC+TGG 0.513960 7_2:-59800985 Msa1065890:CDS
ACATAGATTGTAGCTTTACC+AGG 0.515583 7_2:+59801102 None:intergenic
CTTGTGGAAGATAGAACCTC+AGG 0.518942 7_2:+59800911 None:intergenic
AAAATGTTGATGAATTTAAG+TGG 0.519458 7_2:-59801077 Msa1065890:CDS
TGTAAGCTAAGTGAATGGTC+TGG 0.522229 7_2:-59800015 Msa1065890:CDS
ATCTCCGTACGATCTATACT+TGG 0.524349 7_2:+59800159 None:intergenic
GGGATAGAGATGGCGAAGCA+AGG 0.525715 7_2:+59799831 None:intergenic
ATGACTGCAAGTTGGTCATT+GGG 0.527394 7_2:-59801675 Msa1065890:CDS
GTTGTCCAGAAGGATTTGAC+TGG 0.529202 7_2:-59800844 Msa1065890:CDS
TTGATCCCAATGCTTGTGGT+TGG 0.532084 7_2:-59800705 Msa1065890:CDS
GCAGTGAATTCCATTTGGTA+TGG 0.537356 7_2:+59801564 None:intergenic
AGAAGAACGAAAGCGAGAAG+AGG 0.537473 7_2:+59804832 None:intergenic
AGGCCCCATATCATTCGTGC+TGG 0.538645 7_2:+59802863 None:intergenic
GTATGCCCAACCACAAGCAT+TGG 0.539148 7_2:+59800699 None:intergenic
CAAGCATTGACTCTATCACT+TGG 0.542541 7_2:+59799866 None:intergenic
CAGTCCAAGTATAGATCGTA+CGG 0.543562 7_2:-59800163 Msa1065890:CDS
AGCATCAGAGTATACAATGA+AGG 0.550055 7_2:+59799699 None:intergenic
AAGCACATTCCTTAGTCAGT+TGG 0.552027 7_2:-59801596 Msa1065890:CDS
GCTGCCAAGACCATACCAAA+TGG 0.554333 7_2:-59801574 Msa1065890:CDS
AACTTTGATCCCAATGCTTG+TGG 0.555666 7_2:-59800709 Msa1065890:CDS
AGAATGCTGATTCTACCGTT+CGG 0.555890 7_2:-59801984 Msa1065890:CDS
AGATCAGATCATTATGGCTA+GGG 0.557672 7_2:-59801953 Msa1065890:CDS
GGAGGTAGTAATCTATGGTA+AGG 0.557714 7_2:+59801530 None:intergenic
ACATTACTGGCATATATCAC+AGG 0.557897 7_2:-59800636 Msa1065890:CDS
TAACCAAATTCTCAGTCATA+GGG 0.564966 7_2:+59801485 None:intergenic
CCTTTGGTTCTGTTGTTGAG+CGG 0.565143 7_2:+59804868 None:intergenic
ACAAGAAGTTCAAAAGGAGA+AGG 0.565190 7_2:-59802636 Msa1065890:CDS
CATTGTATACTCTGATGCTA+CGG 0.566493 7_2:-59799695 Msa1065890:three_prime_UTR
TACCCGTTGGCTTGTAACAT+CGG 0.566893 7_2:+59803152 None:intergenic
TCCCGTAAGGCTAGCCAGAA+GGG 0.568105 7_2:-59802496 Msa1065890:intron
AAAATCAATGGCAATGGCGT+GGG 0.568567 7_2:+59799811 None:intergenic
GAGATCAGATCATTATGGCT+AGG 0.570674 7_2:-59801954 Msa1065890:CDS
ACTGCAAGAAAGCTACTTGG+AGG 0.572652 7_2:+59799588 None:intergenic
GTCCCGTAAGGCTAGCCAGA+AGG 0.574160 7_2:-59802497 Msa1065890:CDS
AAATTAGGGACATTACCTCC+AGG 0.574173 7_2:-59800252 Msa1065890:CDS
ACATGTTTGATTTGAAGGTG+TGG 0.576976 7_2:-59800669 Msa1065890:CDS
AATAAATCATGGCATGTACT+CGG 0.577057 7_2:-59800195 Msa1065890:CDS
GGCTGTTGCAGGCTACCAAA+TGG 0.577386 7_2:-59803047 Msa1065890:intron
TTAGAAGCACCAGTAGTGGA+TGG 0.580206 7_2:+59800976 None:intergenic
GAAGTTCAAAAGGAGAAGGA+AGG 0.583365 7_2:-59802632 Msa1065890:CDS
GAGATTAGAAGCACCAGTAG+TGG 0.588353 7_2:+59800972 None:intergenic
GGATAGAGATGGCGAAGCAA+GGG 0.590200 7_2:+59799832 None:intergenic
GGAACTGTAAGCTAAGTGAA+TGG 0.593776 7_2:-59800020 Msa1065890:CDS
TACCAAATGGAGAGAACAGA+AGG 0.593932 7_2:-59803034 Msa1065890:CDS
CTGATCTCGCATCAACCGAA+CGG 0.595642 7_2:+59801969 None:intergenic
TTTCAATGCTCAACCACCTG+AGG 0.596049 7_2:-59800927 Msa1065890:CDS
TACAGTTCCTAAGATAAGGA+TGG 0.597078 7_2:+59800034 None:intergenic
ATTCAAGCTGTCTCAAGACT+GGG 0.597835 7_2:+59801037 None:intergenic
TAACTTAAGCTCTGTTCGCG+AGG 0.597875 7_2:-59799516 None:intergenic
GTATACTCTGATGCTACGGA+TGG 0.599754 7_2:-59799691 Msa1065890:three_prime_UTR
TGTACCAAGAACTGCAAACA+CGG 0.602677 7_2:-59801891 Msa1065890:CDS
AATTTAGTTTATCAGTAACA+AGG 0.603779 7_2:+59801160 None:intergenic
TGATGACATTGTTGTCCAGA+AGG 0.605837 7_2:-59800854 Msa1065890:CDS
TTTGACTGGATTATGGAATG+TGG 0.606404 7_2:-59800830 Msa1065890:CDS
ATTGTGCATACCTCTGGTGT+AGG 0.607000 7_2:+59801821 None:intergenic
TAGAAGCACCAGTAGTGGAT+GGG 0.607302 7_2:+59800977 None:intergenic
TCTCCGATGTTACAAGCCAA+CGG 0.617445 7_2:-59803155 Msa1065890:CDS
TCAATTGTATGACTGCAAGT+TGG 0.617572 7_2:-59801683 Msa1065890:CDS
GTATAAAACGAGCTACCCGT+TGG 0.619832 7_2:+59803139 None:intergenic
ATGCAGCAGGTCTTCCTCAG+TGG 0.620368 7_2:-59802527 Msa1065890:intron
GCAATTAATAGAGAAAAGGA+TGG 0.621349 7_2:-59802145 Msa1065890:CDS
CTCAACTGTTGTGAATGCAA+AGG 0.621934 7_2:-59801398 Msa1065890:intron
CTCAACAACAGAACCAAAGG+AGG 0.622199 7_2:-59804865 Msa1065890:CDS
CCGCTCAACAACAGAACCAA+AGG 0.623536 7_2:-59804868 Msa1065890:CDS
AAGCACCAGTAGTGGATGGG+TGG 0.630751 7_2:+59800980 None:intergenic
ATAATGGTAATATGAAGCCA+TGG 0.631825 7_2:-59800113 Msa1065890:CDS
GAGTCAGCGTGCTTTAGGTG+AGG 0.637586 7_2:-59801860 Msa1065890:CDS
CTGGGGTATGTATATTCTGG+AGG 0.642602 7_2:+59799955 None:intergenic
AGGATCTTTATAAGTAAACA+AGG 0.645552 7_2:+59799719 None:intergenic
TTGATTTCAGAATGAAGACA+GGG 0.646041 7_2:-59800283 Msa1065890:intron
AGTGGACTGATAGTCCCGTA+AGG 0.647693 7_2:-59802509 Msa1065890:CDS
GAAGCGAAGAAGAAGATGAG+AGG 0.651947 7_2:+59804796 None:intergenic
AATTCAATCATACTCTAACA+AGG 0.652292 7_2:+59799891 None:intergenic
AGGGCATAATGATAAAGACT+GGG 0.655474 7_2:+59801460 None:intergenic
TAGAATGTCATTAGCCCTGG+AGG 0.657306 7_2:+59800237 None:intergenic
AATTAGGGACATTACCTCCA+GGG 0.657912 7_2:-59800251 Msa1065890:CDS
GTTGGTCATTGGGAAAGTAA+GGG 0.665899 7_2:-59801665 Msa1065890:CDS
TAGAGAAAAGGATGGCAAAG+CGG 0.669580 7_2:-59802137 Msa1065890:CDS
ATTCTCACTAATTTGAGACA+AGG 0.669921 7_2:-59799758 Msa1065890:three_prime_UTR
TAGATTGTAGCTTTACCAGG+AGG 0.679016 7_2:+59801105 None:intergenic
TGTCCAGCACGAATGATATG+GGG 0.682822 7_2:-59802866 Msa1065890:CDS
GCAATGGCGTGGGATAGAGA+TGG 0.686084 7_2:+59799821 None:intergenic
AACGGTGCAGTTGAAACATG+TGG 0.702671 7_2:-59800790 Msa1065890:CDS
TTACTGGCATATATCACAGG+TGG 0.707903 7_2:-59800633 Msa1065890:CDS
GTGGAAGATAGAACCTCAGG+TGG 0.712503 7_2:+59800914 None:intergenic
CTGATGCTGACCTACACCAG+AGG 0.718609 7_2:-59801831 Msa1065890:intron
ACGGGACTATCAGTCCACTG+AGG 0.806472 7_2:+59802513 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAACAAAATGTTATTTTTT+TGG - chr7_2:59799951-59799970 Msa1065890:three_prime_UTR 10.0%
!!! CATTATTATAATTTTGTAAA+TGG - chr7_2:59800341-59800360 Msa1065890:intron 10.0%
!! ATTATTTATCAAATAATAGA+TGG + chr7_2:59803261-59803280 None:intergenic 10.0%
!!! ATTAGTTTTAAAATAGAAAT+TGG + chr7_2:59804054-59804073 None:intergenic 10.0%
!!! TTTATTGTTTTTGTTCAATT+TGG - chr7_2:59799889-59799908 Msa1065890:three_prime_UTR 15.0%
!!! TGTTTTCTTGATTTTTTATT+TGG - chr7_2:59800064-59800083 Msa1065890:CDS 15.0%
!!! ATTTGTTAATTAACTGAATT+TGG - chr7_2:59800140-59800159 Msa1065890:CDS 15.0%
!!! ATAATTTTGTAAATGGAATT+TGG - chr7_2:59800348-59800367 Msa1065890:intron 15.0%
!! TAGCATTCTAATAATATAAT+TGG - chr7_2:59801256-59801275 Msa1065890:intron 15.0%
!! TTAATGAAAAATTAATGAGA+AGG + chr7_2:59801974-59801993 None:intergenic 15.0%
!! TTCACTAAAGATAATTAATT+AGG + chr7_2:59802770-59802789 None:intergenic 15.0%
!! AAATCAAACATGAAAAAAAA+TGG + chr7_2:59804224-59804243 None:intergenic 15.0%
!! CTTGATTATAATTCAGTAAT+GGG - chr7_2:59799856-59799875 Msa1065890:three_prime_UTR 20.0%
!! ATGTATGCATTGTATTAAAT+GGG - chr7_2:59800679-59800698 Msa1065890:CDS 20.0%
!! TACAAACACAATTTAGTTAA+TGG + chr7_2:59802099-59802118 None:intergenic 20.0%
!! ACATGAAAAAATCAAAGAAA+TGG - chr7_2:59802789-59802808 Msa1065890:CDS 20.0%
!! CATGAAAAAATCAAAGAAAT+GGG - chr7_2:59802790-59802809 Msa1065890:CDS 20.0%
!!! TCAAATCCATCATTTTAAAA+AGG + chr7_2:59803207-59803226 None:intergenic 20.0%
!! AACATAAGTTAATGAATGAA+GGG + chr7_2:59803298-59803317 None:intergenic 20.0%
!!! AATTTAGTTTATCAGTAACA+AGG + chr7_2:59803363-59803382 None:intergenic 20.0%
!!! GTTACTGATAAACTAAATTT+TGG - chr7_2:59803364-59803383 Msa1065890:intron 20.0%
!!! AAAATGTTGATGAATTTAAG+TGG - chr7_2:59803443-59803462 Msa1065890:intron 20.0%
!!! AATGAAAGAGTATTATTTCA+AGG - chr7_2:59803513-59803532 Msa1065890:intron 20.0%
!! AAAAGAATCTTATCCAATTT+CGG + chr7_2:59803640-59803659 None:intergenic 20.0%
! ATAGAAACAAAACACGAAAT+GGG + chr7_2:59799826-59799845 None:intergenic 25.0%
! AATAGAAACAAAACACGAAA+TGG + chr7_2:59799827-59799846 None:intergenic 25.0%
! CCATTACTGAATTATAATCA+AGG + chr7_2:59799858-59799877 None:intergenic 25.0%
! CCTTGATTATAATTCAGTAA+TGG - chr7_2:59799855-59799874 Msa1065890:three_prime_UTR 25.0%
!! TTTAGGAGGAAATTAGTTTA+AGG - chr7_2:59800227-59800246 Msa1065890:CDS 25.0%
! TAAACTCTATAGCAGTATAT+CGG + chr7_2:59800529-59800548 None:intergenic 25.0%
! TATACTGCTATAGAGTTTAT+AGG - chr7_2:59800530-59800549 Msa1065890:intron 25.0%
! ATACTGCTATAGAGTTTATA+GGG - chr7_2:59800531-59800550 Msa1065890:intron 25.0%
! GATGTATGCATTGTATTAAA+TGG - chr7_2:59800678-59800697 Msa1065890:CDS 25.0%
!!! TTATTGGTTTAAATCCTTGT+GGG + chr7_2:59800853-59800872 None:intergenic 25.0%
! CATATGATCCTTCTATTATA+TGG - chr7_2:59801082-59801101 Msa1065890:CDS 25.0%
!!! TTATACATTTTCAGGTTCAT+TGG - chr7_2:59801398-59801417 Msa1065890:intron 25.0%
! AACAACATAGGGTAAAAAAA+TGG + chr7_2:59801453-59801472 None:intergenic 25.0%
!!! ATTTTTTTACCCTATGTTGT+TGG - chr7_2:59801452-59801471 Msa1065890:CDS 25.0%
!!! CTTTTGGAAAAAGAGATTTA+AGG + chr7_2:59801522-59801541 None:intergenic 25.0%
!! TAAATCTCTTTTTCCAAAAG+AGG - chr7_2:59801522-59801541 Msa1065890:CDS 25.0%
!!! ACAATATGGTATTGATTAGA+AGG + chr7_2:59801616-59801635 None:intergenic 25.0%
! TCTAATCAATACCATATTGT+AGG - chr7_2:59801616-59801635 Msa1065890:CDS 25.0%
! AAGAAGCAGAAAGATTATTT+CGG + chr7_2:59801700-59801719 None:intergenic 25.0%
! ACATTAAAATCAGTAGCAAT+AGG + chr7_2:59801825-59801844 None:intergenic 25.0%
! GTGAAATAAAATAAAGCATG+GGG + chr7_2:59801952-59801971 None:intergenic 25.0%
! GGTGAAATAAAATAAAGCAT+GGG + chr7_2:59801953-59801972 None:intergenic 25.0%
! AGGTGAAATAAAATAAAGCA+TGG + chr7_2:59801954-59801973 None:intergenic 25.0%
!! TAATTTTTCATTAATGCAGC+AGG - chr7_2:59801980-59801999 Msa1065890:CDS 25.0%
!! CATGCTATTTGTATATGATA+AGG + chr7_2:59802180-59802199 None:intergenic 25.0%
!!! CACATTCCTTTTTAAAATGA+TGG - chr7_2:59803198-59803217 Msa1065890:intron 25.0%
! CAACATAAGTTAATGAATGA+AGG + chr7_2:59803299-59803318 None:intergenic 25.0%
! CAATAAAAACCACATATTCA+TGG + chr7_2:59803392-59803411 None:intergenic 25.0%
! AGTTAAGATATTTGTCGAAT+CGG + chr7_2:59803768-59803787 None:intergenic 25.0%
!!! TCAAAGTTTTTTGCAATATG+TGG + chr7_2:59803799-59803818 None:intergenic 25.0%
!!! AATGAACATGTTTGATTTGA+AGG - chr7_2:59803846-59803865 Msa1065890:intron 25.0%
!! CTACATAATGTTTCTATTCT+CGG - chr7_2:59803945-59803964 Msa1065890:intron 25.0%
! ATGGTTATACTTGACATATT+TGG + chr7_2:59804470-59804489 None:intergenic 25.0%
! AATTCAATCATACTCTAACA+AGG + chr7_2:59804632-59804651 None:intergenic 25.0%
! GAATGAAAAGCAAAAATCAA+TGG + chr7_2:59804724-59804743 None:intergenic 25.0%
! AGGATCTTTATAAGTAAACA+AGG + chr7_2:59804804-59804823 None:intergenic 25.0%
AAGTGTTAAGTAGTGCAATT+GGG - chr7_2:59799998-59800017 Msa1065890:exon 30.0%
TGAGATAAAAACACATTTGC+AGG - chr7_2:59800262-59800281 Msa1065890:CDS 30.0%
GAGATAAAAACACATTTGCA+GGG - chr7_2:59800263-59800282 Msa1065890:CDS 30.0%
TCAAGCTAAGTATATACTCT+TGG + chr7_2:59800306-59800325 None:intergenic 30.0%
! TATACTTAGCTTGAGTTCAT+TGG - chr7_2:59800312-59800331 Msa1065890:intron 30.0%
!! CTTATTGGTTTAAATCCTTG+TGG + chr7_2:59800854-59800873 None:intergenic 30.0%
TCTAATACTCACTCTCTTAT+TGG + chr7_2:59800869-59800888 None:intergenic 30.0%
ACATCATTAATGAGTAGCAA+AGG + chr7_2:59800950-59800969 None:intergenic 30.0%
! TAGAGCATCCATATAATAGA+AGG + chr7_2:59801093-59801112 None:intergenic 30.0%
GTCCTGTTTAAACACAAATA+TGG - chr7_2:59801128-59801147 Msa1065890:CDS 30.0%
AGCCATATTTGTGTTTAAAC+AGG + chr7_2:59801133-59801152 None:intergenic 30.0%
!!! ATCCTCATCTTTTGTTGTTA+AGG - chr7_2:59801167-59801186 Msa1065890:CDS 30.0%
! AGCTCGTTTTATACATTTTC+AGG - chr7_2:59801390-59801409 Msa1065890:intron 30.0%
!! ATGGTATTGATTAGAAGGTT+GGG + chr7_2:59801611-59801630 None:intergenic 30.0%
!! TATGGTATTGATTAGAAGGT+TGG + chr7_2:59801612-59801631 None:intergenic 30.0%
AACATCAAGAACCTACAATA+TGG + chr7_2:59801630-59801649 None:intergenic 30.0%
GAAATAATCTTTCTGCTTCT+TGG - chr7_2:59801699-59801718 Msa1065890:CDS 30.0%
AATAGGACAATAATGCCTTT+CGG + chr7_2:59801808-59801827 None:intergenic 30.0%
TCTTAGACAAGAAGTTCAAA+AGG - chr7_2:59801878-59801897 Msa1065890:CDS 30.0%
ATCAAGGCTACTATTATTGT+AGG + chr7_2:59802234-59802253 None:intergenic 30.0%
CAAAACATCATACTTCATCA+AGG + chr7_2:59802250-59802269 None:intergenic 30.0%
TGAAAATATTGTTTGACCTG+TGG - chr7_2:59802272-59802291 Msa1065890:intron 30.0%
TGCAGCAATTAATAGAGAAA+AGG - chr7_2:59802371-59802390 Msa1065890:intron 30.0%
GCAATTAATAGAGAAAAGGA+TGG - chr7_2:59802375-59802394 Msa1065890:intron 30.0%
TTCTAGGTAAATACAACCTT+TGG - chr7_2:59802494-59802513 Msa1065890:intron 30.0%
! TTTCATTTTCTTTCCTCCAA+AGG + chr7_2:59802513-59802532 None:intergenic 30.0%
TAACCAAATTCTCAGTCATA+GGG + chr7_2:59803038-59803057 None:intergenic 30.0%
TTAACCAAATTCTCAGTCAT+AGG + chr7_2:59803039-59803058 None:intergenic 30.0%
CAAAACATTGTCTGAGAATA+GGG + chr7_2:59803082-59803101 None:intergenic 30.0%
! AGTCTTTTATGATACATGTG+CGG - chr7_2:59803157-59803176 Msa1065890:CDS 30.0%
!! TAAAATGATGGATTTGAGCT+TGG - chr7_2:59803210-59803229 Msa1065890:intron 30.0%
AAGTTAATGAATGAAGGGTT+GGG + chr7_2:59803293-59803312 None:intergenic 30.0%
TAAGTTAATGAATGAAGGGT+TGG + chr7_2:59803294-59803313 None:intergenic 30.0%
!! AAAGAGTATTATTTCAAGGC+AGG - chr7_2:59803517-59803536 Msa1065890:intron 30.0%
!! TTGAGCATTGAAAGATACTT+TGG + chr7_2:59803586-59803605 None:intergenic 30.0%
GATCTTCATGGAAAAGTTAA+CGG - chr7_2:59803712-59803731 Msa1065890:intron 30.0%
GAGCAAATTGAACATAACAT+CGG - chr7_2:59803921-59803940 Msa1065890:intron 30.0%
! AATGTTTCTATTCTCGGAAT+TGG - chr7_2:59803951-59803970 Msa1065890:intron 30.0%
! TTTGATTTCAGAATGAAGAC+AGG - chr7_2:59804236-59804255 Msa1065890:intron 30.0%
TTGATTTCAGAATGAAGACA+GGG - chr7_2:59804237-59804256 Msa1065890:intron 30.0%
ACATGCCATGATTTATTTAG+CGG + chr7_2:59804322-59804341 None:intergenic 30.0%
AATAAATCATGGCATGTACT+CGG - chr7_2:59804325-59804344 Msa1065890:intron 30.0%
ATAATGGTAATATGAAGCCA+TGG - chr7_2:59804407-59804426 Msa1065890:intron 30.0%
AGTATAACCATCCTTATCTT+AGG - chr7_2:59804479-59804498 Msa1065890:intron 30.0%
TGTTCTTTGTACTTAGGAAT+TGG + chr7_2:59804537-59804556 None:intergenic 30.0%
!! AAAGAGTGTTCTTTGTACTT+AGG + chr7_2:59804543-59804562 None:intergenic 30.0%
AAAGCAAAAATCAATGGCAA+TGG + chr7_2:59804718-59804737 None:intergenic 30.0%
TTGTCTCAAATTAGTGAGAA+TGG + chr7_2:59804763-59804782 None:intergenic 30.0%
! ATTCTCACTAATTTGAGACA+AGG - chr7_2:59804762-59804781 Msa1065890:intron 30.0%
!!! GGTTTTGAAGGAGTAAATTA+AGG - chr7_2:59804908-59804927 Msa1065890:five_prime_UTR 30.0%
TTCAGCGTTAATCATGGAAT+CGG - chr7_2:59799556-59799575 Msa1065890:three_prime_UTR 35.0%
ATTGAGAAGAGAGAGAAAGA+GGG + chr7_2:59799608-59799627 None:intergenic 35.0%
AATTGAGAAGAGAGAGAAAG+AGG + chr7_2:59799609-59799628 None:intergenic 35.0%
! GAAGTGTTAAGTAGTGCAAT+TGG - chr7_2:59799997-59800016 Msa1065890:exon 35.0%
! TAAGTAGTGCAATTGGGTTT+TGG - chr7_2:59800004-59800023 Msa1065890:exon 35.0%
CACACTAACACTATCATCAA+TGG + chr7_2:59800113-59800132 None:intergenic 35.0%
ACTGAATTTGGCTACTGTAT+TGG - chr7_2:59800152-59800171 Msa1065890:CDS 35.0%
ACTGTATTGGATTTAGATGC+TGG - chr7_2:59800165-59800184 Msa1065890:CDS 35.0%
CTGTATTGGATTTAGATGCT+GGG - chr7_2:59800166-59800185 Msa1065890:CDS 35.0%
TGTATTGGATTTAGATGCTG+GGG - chr7_2:59800167-59800186 Msa1065890:CDS 35.0%
!! TTGAAATTTGAAGCACTGTG+TGG - chr7_2:59800194-59800213 Msa1065890:CDS 35.0%
TGTGTGGTTAAGTTCACTTT+AGG - chr7_2:59800210-59800229 Msa1065890:CDS 35.0%
TATAGCAGTATATCGGATAG+CGG + chr7_2:59800522-59800541 None:intergenic 35.0%
GCTATAGAGTTTATAGGGTT+CGG - chr7_2:59800536-59800555 Msa1065890:intron 35.0%
TGGGATTAACAAAACGTAGA+TGG - chr7_2:59800576-59800595 Msa1065890:intron 35.0%
TGCAATAATAGAGTGAGTGT+TGG + chr7_2:59800776-59800795 None:intergenic 35.0%
AAAATTGAACCCACACAAAG+TGG + chr7_2:59800819-59800838 None:intergenic 35.0%
GTCCTTAACAACAAAAGATG+AGG + chr7_2:59801172-59801191 None:intergenic 35.0%
! CGGAAATTTTCTAGACTCAA+AGG + chr7_2:59801680-59801699 None:intergenic 35.0%
ATAGGACAATAATGCCTTTC+GGG + chr7_2:59801807-59801826 None:intergenic 35.0%
! CTTGTCTAAGATGTGTTTCT+GGG + chr7_2:59801869-59801888 None:intergenic 35.0%
! TCTTGTCTAAGATGTGTTTC+TGG + chr7_2:59801870-59801889 None:intergenic 35.0%
ACAAGAAGTTCAAAAGGAGA+AGG - chr7_2:59801884-59801903 Msa1065890:CDS 35.0%
! ATCTCCCATACCTTTTAATG+TGG - chr7_2:59802129-59802148 Msa1065890:CDS 35.0%
! AGCACCACATTAAAAGGTAT+GGG + chr7_2:59802136-59802155 None:intergenic 35.0%
AAGCACCACATTAAAAGGTA+TGG + chr7_2:59802137-59802156 None:intergenic 35.0%
ATCACAAGCACCACATTAAA+AGG + chr7_2:59802142-59802161 None:intergenic 35.0%
GCTACTATTATTGTAGGTTG+GGG + chr7_2:59802228-59802247 None:intergenic 35.0%
GGCTACTATTATTGTAGGTT+GGG + chr7_2:59802229-59802248 None:intergenic 35.0%
AGGCTACTATTATTGTAGGT+TGG + chr7_2:59802230-59802249 None:intergenic 35.0%
TAGGTAAATACAACCTTTGG+AGG - chr7_2:59802497-59802516 Msa1065890:CDS 35.0%
AGATCAGATCATTATGGCTA+GGG - chr7_2:59802567-59802586 Msa1065890:intron 35.0%
TCAATTGTATGACTGCAAGT+TGG - chr7_2:59802837-59802856 Msa1065890:CDS 35.0%
AATTCCATTTGGTATGGTCT+TGG + chr7_2:59802953-59802972 None:intergenic 35.0%
GATAAGCAGTGAATTCCATT+TGG + chr7_2:59802964-59802983 None:intergenic 35.0%
! ATAGGGAACTTTCTCTTTTC+AGG + chr7_2:59803021-59803040 None:intergenic 35.0%
AGGGCATAATGATAAAGACT+GGG + chr7_2:59803063-59803082 None:intergenic 35.0%
TAGGGCATAATGATAAAGAC+TGG + chr7_2:59803064-59803083 None:intergenic 35.0%
CCAAAACATTGTCTGAGAAT+AGG + chr7_2:59803083-59803102 None:intergenic 35.0%
! CCTATTCTCAGACAATGTTT+TGG - chr7_2:59803080-59803099 Msa1065890:intron 35.0%
! GTCTTTTATGATACATGTGC+GGG - chr7_2:59803158-59803177 Msa1065890:CDS 35.0%
!!! ATTTTGGAGCCATGAATATG+TGG - chr7_2:59803380-59803399 Msa1065890:intron 35.0%
! TGGTTTTTATTGAATCCTCC+TGG - chr7_2:59803400-59803419 Msa1065890:intron 35.0%
! ACATAGATTGTAGCTTTACC+AGG + chr7_2:59803421-59803440 None:intergenic 35.0%
TCCACAAGTTTATCCGAAAT+TGG - chr7_2:59803624-59803643 Msa1065890:intron 35.0%
TCCAATTTCGGATAAACTTG+TGG + chr7_2:59803628-59803647 None:intergenic 35.0%
ATAATCCAGTCAAATCCTTC+TGG + chr7_2:59803684-59803703 None:intergenic 35.0%
AGAAGGATTTGACTGGATTA+TGG - chr7_2:59803683-59803702 Msa1065890:intron 35.0%
TTTGACTGGATTATGGAATG+TGG - chr7_2:59803690-59803709 Msa1065890:intron 35.0%
TTATGGAATGTGGATCTTCA+TGG - chr7_2:59803700-59803719 Msa1065890:intron 35.0%
!! ACATGTTTGATTTGAAGGTG+TGG - chr7_2:59803851-59803870 Msa1065890:intron 35.0%
! TTTGAAGGTGTGGAAAAAGA+AGG - chr7_2:59803861-59803880 Msa1065890:intron 35.0%
TGGAAAAAGAAGGACATTAC+TGG - chr7_2:59803871-59803890 Msa1065890:intron 35.0%
ACATTACTGGCATATATCAC+AGG - chr7_2:59803884-59803903 Msa1065890:intron 35.0%
! ACAGGGTACTATGGAAATTA+GGG - chr7_2:59804254-59804273 Msa1065890:intron 35.0%
CACATCCGCTAAATAAATCA+TGG - chr7_2:59804314-59804333 Msa1065890:intron 35.0%
TTGACATATTTGGTCCAGTA+AGG + chr7_2:59804460-59804479 None:intergenic 35.0%
TACAGTTCCTAAGATAAGGA+TGG + chr7_2:59804489-59804508 None:intergenic 35.0%
AGCTTACAGTTCCTAAGATA+AGG + chr7_2:59804493-59804512 None:intergenic 35.0%
TTGAGATTGCCAGGTTAAAA+AGG + chr7_2:59804601-59804620 None:intergenic 35.0%
AGCATCAGAGTATACAATGA+AGG + chr7_2:59804824-59804843 None:intergenic 35.0%
CATTGTATACTCTGATGCTA+CGG - chr7_2:59804825-59804844 Msa1065890:CDS 35.0%
TCAGAAGTAGCTTTCTTGTA+TGG - chr7_2:59804887-59804906 Msa1065890:exon 35.0%
!!! GCTTTCTTGTATGGTTTTGA+AGG - chr7_2:59804896-59804915 Msa1065890:five_prime_UTR 35.0%
ATAACTGCAAGAAAGCTACT+TGG + chr7_2:59804938-59804957 None:intergenic 35.0%
TGCACTTTCAGCGTTAATCA+TGG - chr7_2:59799550-59799569 Msa1065890:three_prime_UTR 40.0%
AAAGAGGGTTTATGGCGTAA+TGG + chr7_2:59799593-59799612 None:intergenic 40.0%
AGAGAGAGAAAGAGGGTTTA+TGG + chr7_2:59799601-59799620 None:intergenic 40.0%
AGGAAAAGAAGATCCTCCTT+TGG + chr7_2:59799671-59799690 None:intergenic 40.0%
CACACTTCTTCTTCTTCTTC+CGG - chr7_2:59799754-59799773 Msa1065890:three_prime_UTR 40.0%
TTTGGCAGTAGTGTAGTAGA+AGG - chr7_2:59799907-59799926 Msa1065890:three_prime_UTR 40.0%
! TGTAAGATCTGTGCTTGCTA+TGG - chr7_2:59799975-59799994 Msa1065890:three_prime_UTR 40.0%
GTGGTTAAGTTCACTTTAGG+AGG - chr7_2:59800213-59800232 Msa1065890:CDS 40.0%
TGTAGATCAGTGCACTATTG+CGG - chr7_2:59800397-59800416 Msa1065890:intron 40.0%
ATAGCAGTATATCGGATAGC+GGG + chr7_2:59800521-59800540 None:intergenic 40.0%
CTTTGCACTTTAGATACCCT+AGG - chr7_2:59800619-59800638 Msa1065890:intron 40.0%
ATTAAATGGGAACAGCCGAT+AGG - chr7_2:59800692-59800711 Msa1065890:CDS 40.0%
TTAAATGGGAACAGCCGATA+GGG - chr7_2:59800693-59800712 Msa1065890:CDS 40.0%
!! ATGGCTACAATGGTTGATAG+AGG - chr7_2:59800717-59800736 Msa1065890:CDS 40.0%
TTTCAAAGTGTAGACCCACA+AGG - chr7_2:59800836-59800855 Msa1065890:CDS 40.0%
! AGTGTTGCTAGCATTACTCA+TGG - chr7_2:59800906-59800925 Msa1065890:CDS 40.0%
! TTCCTCGGTTTAGAACTCAT+TGG - chr7_2:59801027-59801046 Msa1065890:CDS 40.0%
AGTGTAATGTCCTTGATGTG+AGG - chr7_2:59801218-59801237 Msa1065890:intron 40.0%
ATTTCTTCCTCCTCACATCA+AGG + chr7_2:59801231-59801250 None:intergenic 40.0%
TGATGTGAGGAGGAAGAAAT+AGG - chr7_2:59801231-59801250 Msa1065890:intron 40.0%
TACCAAATGGAGAGAACAGA+AGG - chr7_2:59801486-59801505 Msa1065890:CDS 40.0%
!! GTATTGATTAGAAGGTTGGG+AGG + chr7_2:59801608-59801627 None:intergenic 40.0%
TATGTCCAGCACGAATGATA+TGG - chr7_2:59801652-59801671 Msa1065890:CDS 40.0%
ATGTCCAGCACGAATGATAT+GGG - chr7_2:59801653-59801672 Msa1065890:CDS 40.0%
GACTTCAAACGCAACAAATC+AGG - chr7_2:59801739-59801758 Msa1065890:intron 40.0%
CAAACGCAACAAATCAGGTT+AGG - chr7_2:59801744-59801763 Msa1065890:intron 40.0%
TAGGACAATAATGCCTTTCG+GGG + chr7_2:59801806-59801825 None:intergenic 40.0%
GAAGTTCAAAAGGAGAAGGA+AGG - chr7_2:59801888-59801907 Msa1065890:CDS 40.0%
ATAAAGAAAACTCGCTCCAC+AGG + chr7_2:59802291-59802310 None:intergenic 40.0%
TAGAGAAAAGGATGGCAAAG+CGG - chr7_2:59802383-59802402 Msa1065890:intron 40.0%
! TCAGTTGATTCAGCAGTTCT+AGG - chr7_2:59802478-59802497 Msa1065890:intron 40.0%
!! AGAATGCTGATTCTACCGTT+CGG - chr7_2:59802536-59802555 Msa1065890:intron 40.0%
GATGCGAGATCAGATCATTA+TGG - chr7_2:59802561-59802580 Msa1065890:intron 40.0%
GAGATCAGATCATTATGGCT+AGG - chr7_2:59802566-59802585 Msa1065890:intron 40.0%
TGTACCAAGAACTGCAAACA+CGG - chr7_2:59802629-59802648 Msa1065890:CDS 40.0%
CAGAAAATTGTGCATACCTC+TGG + chr7_2:59802708-59802727 None:intergenic 40.0%
AATGGGCCAAGTTCTTTCTA+AGG - chr7_2:59802807-59802826 Msa1065890:CDS 40.0%
CTTTCGCCTTAGAAAGAACT+TGG + chr7_2:59802816-59802835 None:intergenic 40.0%
!! TATGACTGCAAGTTGGTCAT+TGG - chr7_2:59802844-59802863 Msa1065890:CDS 40.0%
!! ATGACTGCAAGTTGGTCATT+GGG - chr7_2:59802845-59802864 Msa1065890:CDS 40.0%
AGTTGGTCATTGGGAAAGTA+AGG - chr7_2:59802854-59802873 Msa1065890:CDS 40.0%
GTTGGTCATTGGGAAAGTAA+GGG - chr7_2:59802855-59802874 Msa1065890:CDS 40.0%
AAGCACATTCCTTAGTCAGT+TGG - chr7_2:59802924-59802943 Msa1065890:intron 40.0%
GCAGTGAATTCCATTTGGTA+TGG + chr7_2:59802959-59802978 None:intergenic 40.0%
GGAGGTAGTAATCTATGGTA+AGG + chr7_2:59802993-59803012 None:intergenic 40.0%
!!! GGAACTTTCTCTTTTCAGGT+GGG + chr7_2:59803017-59803036 None:intergenic 40.0%
GTTCCCTATGACTGAGAATT+TGG - chr7_2:59803032-59803051 Msa1065890:CDS 40.0%
CTCAACTGTTGTGAATGCAA+AGG - chr7_2:59803122-59803141 Msa1065890:intron 40.0%
GTTGTTGTCTTTGACATTGC+AGG - chr7_2:59803315-59803334 Msa1065890:intron 40.0%
AGGTGAAACACATGCTTTGA+AGG + chr7_2:59803343-59803362 None:intergenic 40.0%
! TAGATTGTAGCTTTACCAGG+AGG + chr7_2:59803418-59803437 None:intergenic 40.0%
ATTCAAGCTGTCTCAAGACT+GGG + chr7_2:59803486-59803505 None:intergenic 40.0%
TGATGACATTGTTGTCCAGA+AGG - chr7_2:59803666-59803685 Msa1065890:intron 40.0%
AACTTTGATCCCAATGCTTG+TGG - chr7_2:59803811-59803830 Msa1065890:intron 40.0%
TTACTGGCATATATCACAGG+TGG - chr7_2:59803887-59803906 Msa1065890:intron 40.0%
ATATCACAGGTGGCAGAATT+TGG - chr7_2:59803897-59803916 Msa1065890:intron 40.0%
AACCAAGGAATCTAGACTGT+TGG + chr7_2:59804113-59804132 None:intergenic 40.0%
AGCATGATTCCCTACAGTTA+GGG + chr7_2:59804153-59804172 None:intergenic 40.0%
! AGAATGAAGACAGGGTACTA+TGG - chr7_2:59804245-59804264 Msa1065890:intron 40.0%
! GACAGGGTACTATGGAAATT+AGG - chr7_2:59804253-59804272 Msa1065890:intron 40.0%
AAATTAGGGACATTACCTCC+AGG - chr7_2:59804268-59804287 Msa1065890:intron 40.0%
AATTAGGGACATTACCTCCA+GGG - chr7_2:59804269-59804288 Msa1065890:intron 40.0%
CAGTCCAAGTATAGATCGTA+CGG - chr7_2:59804357-59804376 Msa1065890:intron 40.0%
ATCTCCGTACGATCTATACT+TGG + chr7_2:59804364-59804383 None:intergenic 40.0%
GCAGCAGTTGTACACTATAA+TGG - chr7_2:59804391-59804410 Msa1065890:intron 40.0%
GTCATTGCTATCTCTAACCA+TGG + chr7_2:59804427-59804446 None:intergenic 40.0%
!! TGACAAAGTATCGTCCTTAC+TGG - chr7_2:59804443-59804462 Msa1065890:intron 40.0%
TAAAAAGGAGACAGAAGGCT+GGG + chr7_2:59804586-59804605 None:intergenic 40.0%
TTAAAAAGGAGACAGAAGGC+TGG + chr7_2:59804587-59804606 None:intergenic 40.0%
CAGGTTAAAAAGGAGACAGA+AGG + chr7_2:59804591-59804610 None:intergenic 40.0%
! CTTCTGTCTCCTTTTTAACC+TGG - chr7_2:59804589-59804608 Msa1065890:intron 40.0%
!! CAAGCATTGACTCTATCACT+TGG + chr7_2:59804657-59804676 None:intergenic 40.0%
AAAATCAATGGCAATGGCGT+GGG + chr7_2:59804712-59804731 None:intergenic 40.0%
AAAAATCAATGGCAATGGCG+TGG + chr7_2:59804713-59804732 None:intergenic 40.0%
AGCGGCATTGTATGTGTGTA+TGG + chr7_2:59799637-59799656 None:intergenic 45.0%
!! CCTTTGGTTCTGTTGTTGAG+CGG + chr7_2:59799655-59799674 None:intergenic 45.0%
CTCAACAACAGAACCAAAGG+AGG - chr7_2:59799655-59799674 Msa1065890:three_prime_UTR 45.0%
AGAAGAACGAAAGCGAGAAG+AGG + chr7_2:59799691-59799710 None:intergenic 45.0%
GAAGCGAAGAAGAAGATGAG+AGG + chr7_2:59799727-59799746 None:intergenic 45.0%
! CAGAGAGAGAGAGTATGAAC+CGG + chr7_2:59799776-59799795 None:intergenic 45.0%
ATTGGATTTAGATGCTGGGG+TGG - chr7_2:59800170-59800189 Msa1065890:CDS 45.0%
ATCACAGAGAATCCTACCAC+TGG + chr7_2:59800432-59800451 None:intergenic 45.0%
AGATACCCTAGGACTTTGTG+AGG - chr7_2:59800630-59800649 Msa1065890:CDS 45.0%
GCTAACCTCACAAAGTCCTA+GGG + chr7_2:59800638-59800657 None:intergenic 45.0%
TGCTAACCTCACAAAGTCCT+AGG + chr7_2:59800639-59800658 None:intergenic 45.0%
CCATTGTAGCCATTCCCTAT+CGG + chr7_2:59800710-59800729 None:intergenic 45.0%
ATATGTCCCACCACTTTGTG+TGG - chr7_2:59800806-59800825 Msa1065890:CDS 45.0%
TATGTCCCACCACTTTGTGT+GGG - chr7_2:59800807-59800826 Msa1065890:CDS 45.0%
TTGAACCCACACAAAGTGGT+GGG + chr7_2:59800815-59800834 None:intergenic 45.0%
ATTGAACCCACACAAAGTGG+TGG + chr7_2:59800816-59800835 None:intergenic 45.0%
GTTTCGCTCTTGTACTTCCT+CGG - chr7_2:59801012-59801031 Msa1065890:CDS 45.0%
!! CACCAATGAGTTCTAAACCG+AGG + chr7_2:59801032-59801051 None:intergenic 45.0%
GTAATGTCCTTGATGTGAGG+AGG - chr7_2:59801221-59801240 Msa1065890:intron 45.0%
TCTCCGATGTTACAAGCCAA+CGG - chr7_2:59801365-59801384 Msa1065890:intron 45.0%
!! TACCCGTTGGCTTGTAACAT+CGG + chr7_2:59801371-59801390 None:intergenic 45.0%
GTATAAAACGAGCTACCCGT+TGG + chr7_2:59801384-59801403 None:intergenic 45.0%
CTGCAACAGCCAACAACATA+GGG + chr7_2:59801464-59801483 None:intergenic 45.0%
TGCCTTCTGTTCTCTCCATT+TGG + chr7_2:59801491-59801510 None:intergenic 45.0%
! CAGCTTGTGCTTACCTCTTT+TGG + chr7_2:59801538-59801557 None:intergenic 45.0%
TGTCCAGCACGAATGATATG+GGG - chr7_2:59801654-59801673 Msa1065890:CDS 45.0%
TCTGCTTCTTGGAGAGTTGT+TGG - chr7_2:59801710-59801729 Msa1065890:CDS 45.0%
CTGCTTCTTGGAGAGTTGTT+GGG - chr7_2:59801711-59801730 Msa1065890:CDS 45.0%
! AAGTTTGATTTCCCCCCGAA+AGG - chr7_2:59801790-59801809 Msa1065890:intron 45.0%
AGGACAATAATGCCTTTCGG+GGG + chr7_2:59801805-59801824 None:intergenic 45.0%
GAGAAGGAAGGAAGATCTTC+AGG - chr7_2:59801900-59801919 Msa1065890:CDS 45.0%
AAGAATGATGCTCACCCTTC+TGG + chr7_2:59802041-59802060 None:intergenic 45.0%
AGAAGGGTGAGCATCATTCT+TGG - chr7_2:59802040-59802059 Msa1065890:CDS 45.0%
AGAGAAAAGGATGGCAAAGC+GGG - chr7_2:59802384-59802403 Msa1065890:intron 45.0%
TAAGCCGTGTTTGCAGTTCT+TGG + chr7_2:59802636-59802655 None:intergenic 45.0%
AAAGAGAGTCAGCGTGCTTT+AGG - chr7_2:59802655-59802674 Msa1065890:CDS 45.0%
ATTGTGCATACCTCTGGTGT+AGG + chr7_2:59802702-59802721 None:intergenic 45.0%
TGGGAGGAGGTAGTAATCTA+TGG + chr7_2:59802998-59803017 None:intergenic 45.0%
!!! ACTTTCTCTTTTCAGGTGGG+AGG + chr7_2:59803014-59803033 None:intergenic 45.0%
!! GGGAACTTTCTCTTTTCAGG+TGG + chr7_2:59803018-59803037 None:intergenic 45.0%
ACTGTTGCAAGCAAAACACG+TGG + chr7_2:59803238-59803257 None:intergenic 45.0%
GATTCAAGCTGTCTCAAGAC+TGG + chr7_2:59803487-59803506 None:intergenic 45.0%
!! TAGAAGCACCAGTAGTGGAT+GGG + chr7_2:59803546-59803565 None:intergenic 45.0%
!! TTAGAAGCACCAGTAGTGGA+TGG + chr7_2:59803547-59803566 None:intergenic 45.0%
!! GAGATTAGAAGCACCAGTAG+TGG + chr7_2:59803551-59803570 None:intergenic 45.0%
TTTCAATGCTCAACCACCTG+AGG - chr7_2:59803593-59803612 Msa1065890:intron 45.0%
CTTGTGGAAGATAGAACCTC+AGG + chr7_2:59803612-59803631 None:intergenic 45.0%
GTTGTCCAGAAGGATTTGAC+TGG - chr7_2:59803676-59803695 Msa1065890:intron 45.0%
AACGGTGCAGTTGAAACATG+TGG - chr7_2:59803730-59803749 Msa1065890:intron 45.0%
TTGATCCCAATGCTTGTGGT+TGG - chr7_2:59803815-59803834 Msa1065890:intron 45.0%
TGATCCCAATGCTTGTGGTT+GGG - chr7_2:59803816-59803835 Msa1065890:intron 45.0%
TATGCCCAACCACAAGCATT+GGG + chr7_2:59803823-59803842 None:intergenic 45.0%
AATGCTTGTGGTTGGGCATA+CGG - chr7_2:59803823-59803842 Msa1065890:intron 45.0%
CAACCACGAATCTCGAATCT+CGG - chr7_2:59804002-59804021 Msa1065890:intron 45.0%
AGCCAACAGTCTAGATTCCT+TGG - chr7_2:59804108-59804127 Msa1065890:intron 45.0%
AGTCTAGATTCCTTGGTTGC+AGG - chr7_2:59804115-59804134 Msa1065890:intron 45.0%
TGTGTGTTTGCCCTAACTGT+AGG - chr7_2:59804140-59804159 Msa1065890:intron 45.0%
GTGTGTTTGCCCTAACTGTA+GGG - chr7_2:59804141-59804160 Msa1065890:intron 45.0%
GAGCATGATTCCCTACAGTT+AGG + chr7_2:59804154-59804173 None:intergenic 45.0%
TAGAATGTCATTAGCCCTGG+AGG + chr7_2:59804286-59804305 None:intergenic 45.0%
CCATAGAATGTCATTAGCCC+TGG + chr7_2:59804289-59804308 None:intergenic 45.0%
CCAGGGCTAATGACATTCTA+TGG - chr7_2:59804286-59804305 Msa1065890:intron 45.0%
ATCATGGCATGTACTCGGTT+TGG - chr7_2:59804330-59804349 Msa1065890:intron 45.0%
TCATGGCATGTACTCGGTTT+GGG - chr7_2:59804331-59804350 Msa1065890:intron 45.0%
CTGGGGTATGTATATTCTGG+AGG + chr7_2:59804568-59804587 None:intergenic 45.0%
AGGCTGGGGTATGTATATTC+TGG + chr7_2:59804571-59804590 None:intergenic 45.0%
AAAAAGGAGACAGAAGGCTG+GGG + chr7_2:59804585-59804604 None:intergenic 45.0%
GTATACTCTGATGCTACGGA+TGG - chr7_2:59804829-59804848 Msa1065890:CDS 45.0%
ACTGCAAGAAAGCTACTTGG+AGG + chr7_2:59804935-59804954 None:intergenic 45.0%
CCGCTCAACAACAGAACCAA+AGG - chr7_2:59799652-59799671 Msa1065890:three_prime_UTR 50.0%
ATTGCGGAATGACCTACCAG+TGG - chr7_2:59800413-59800432 Msa1065890:intron 50.0%
CAGAGAATCCTACCACTGGT+AGG + chr7_2:59800428-59800447 None:intergenic 50.0%
TTCAGCAGTGGCAGTTGTCA+CGG - chr7_2:59800478-59800497 Msa1065890:intron 50.0%
!! CAGTATATCGGATAGCGGGA+TGG + chr7_2:59800517-59800536 None:intergenic 50.0%
CCGATAGGGAATGGCTACAA+TGG - chr7_2:59800707-59800726 Msa1065890:CDS 50.0%
CAAGAGCGAAACAGCAACAG+AGG + chr7_2:59801004-59801023 None:intergenic 50.0%
CTCCGATGTTACAAGCCAAC+GGG - chr7_2:59801366-59801385 Msa1065890:intron 50.0%
CCTGCAACAGCCAACAACAT+AGG + chr7_2:59801465-59801484 None:intergenic 50.0%
! CCTATGTTGTTGGCTGTTGC+AGG - chr7_2:59801462-59801481 Msa1065890:CDS 50.0%
GGACAATAATGCCTTTCGGG+GGG + chr7_2:59801804-59801823 None:intergenic 50.0%
!! AGTGGACTGATAGTCCCGTA+AGG - chr7_2:59802011-59802030 Msa1065890:CDS 50.0%
CTGATCTCGCATCAACCGAA+CGG + chr7_2:59802554-59802573 None:intergenic 50.0%
GCTACAAACTGCTGATGAGC+AGG - chr7_2:59802882-59802901 Msa1065890:CDS 50.0%
ACTGCTGATGAGCAGGTTAG+AGG - chr7_2:59802889-59802908 Msa1065890:intron 50.0%
TCTTGGCAGCCAACTGACTA+AGG + chr7_2:59802936-59802955 None:intergenic 50.0%
GCTGCCAAGACCATACCAAA+TGG - chr7_2:59802946-59802965 Msa1065890:intron 50.0%
!!! TTCTCTTTTCAGGTGGGAGG+AGG + chr7_2:59803011-59803030 None:intergenic 50.0%
GTGGAAGATAGAACCTCAGG+TGG + chr7_2:59803609-59803628 None:intergenic 50.0%
GTATGCCCAACCACAAGCAT+TGG + chr7_2:59803824-59803843 None:intergenic 50.0%
TGGTTGCGTGCAGTACTATG+TGG + chr7_2:59803988-59804007 None:intergenic 50.0%
GAATCTCGAATCTCGGCTGT+TGG - chr7_2:59804009-59804028 Msa1065890:intron 50.0%
! ACTGTTGGCTGAGGATCAGA+CGG + chr7_2:59804098-59804117 None:intergenic 50.0%
! GGAATCTAGACTGTTGGCTG+AGG + chr7_2:59804107-59804126 None:intergenic 50.0%
AACACACAGTCCTGCAACCA+AGG + chr7_2:59804128-59804147 None:intergenic 50.0%
GCACTTCACTTGAGATTGCC+AGG + chr7_2:59804610-59804629 None:intergenic 50.0%
GGATAGAGATGGCGAAGCAA+GGG + chr7_2:59804691-59804710 None:intergenic 50.0%
CGGAATGACCTACCAGTGGT+AGG - chr7_2:59800417-59800436 Msa1065890:intron 55.0%
! TGAAGGCGAGCTGGCTCATA+GGG + chr7_2:59800462-59800481 None:intergenic 55.0%
GTGACAACTGCCACTGCTGA+AGG + chr7_2:59800479-59800498 None:intergenic 55.0%
GTTGTCACGGTCGCGAATTG+TGG - chr7_2:59800491-59800510 Msa1065890:intron 55.0%
TGGGAACAGCCGATAGGGAA+TGG - chr7_2:59800698-59800717 Msa1065890:CDS 55.0%
GGCTGTTGCAGGCTACCAAA+TGG - chr7_2:59801473-59801492 Msa1065890:CDS 55.0%
AGGCCCCATATCATTCGTGC+TGG + chr7_2:59801660-59801679 None:intergenic 55.0%
ATGCAGCAGGTCTTCCTCAG+TGG - chr7_2:59801993-59802012 Msa1065890:CDS 55.0%
ACGGGACTATCAGTCCACTG+AGG + chr7_2:59802010-59802029 None:intergenic 55.0%
! TCCCGTAAGGCTAGCCAGAA+GGG - chr7_2:59802024-59802043 Msa1065890:CDS 55.0%
!! ACCCTTCTGGCTAGCCTTAC+GGG + chr7_2:59802028-59802047 None:intergenic 55.0%
!! CACCCTTCTGGCTAGCCTTA+CGG + chr7_2:59802029-59802048 None:intergenic 55.0%
!! GGCTGCTGAGTTGGTACAAC+AGG - chr7_2:59802405-59802424 Msa1065890:intron 55.0%
! GAGTCAGCGTGCTTTAGGTG+AGG - chr7_2:59802660-59802679 Msa1065890:CDS 55.0%
CTGATGCTGACCTACACCAG+AGG - chr7_2:59802689-59802708 Msa1065890:intron 55.0%
!! AAGCACCAGTAGTGGATGGG+TGG + chr7_2:59803543-59803562 None:intergenic 55.0%
CAGCCGAGATTCGAGATTCG+TGG + chr7_2:59804008-59804027 None:intergenic 55.0%
GGGATAGAGATGGCGAAGCA+AGG + chr7_2:59804692-59804711 None:intergenic 55.0%
GCAATGGCGTGGGATAGAGA+TGG + chr7_2:59804702-59804721 None:intergenic 55.0%
! CGAGCTGGCTCATAGGGAGA+TGG + chr7_2:59800456-59800475 None:intergenic 60.0%
! CTGAAGGCGAGCTGGCTCAT+AGG + chr7_2:59800463-59800482 None:intergenic 60.0%
GGCACGACACGTCGCTATCT+GGG - chr7_2:59800557-59800576 Msa1065890:intron 60.0%
! GTCCCGTAAGGCTAGCCAGA+AGG - chr7_2:59802023-59802042 Msa1065890:CDS 60.0%
AGCCAGCTCGCCTTCAGCAG+TGG - chr7_2:59800466-59800485 Msa1065890:intron 65.0%
TGCCACTGCTGAAGGCGAGC+TGG + chr7_2:59800471-59800490 None:intergenic 65.0%
CGGCACGACACGTCGCTATC+TGG - chr7_2:59800556-59800575 Msa1065890:intron 65.0%
!! GGCAAAGCGGGCTGCTGAGT+TGG - chr7_2:59802396-59802415 Msa1065890:intron 65.0%
GCAGGCCACCCATCCACTAC+TGG - chr7_2:59803535-59803554 Msa1065890:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 59799517 59805025 59799517 ID=Msa1065890;Name=Msa1065890
chr7_2 mRNA 59799517 59805025 59799517 ID=Msa1065890-mRNA-1;Parent=Msa1065890;Name=Msa1065890-mRNA-1;_AED=0.05;_eAED=0.05;_QI=132|1|1|1|1|1|10|494|679
chr7_2 exon 59799517 59800295 59799517 ID=Msa1065890-mRNA-1:exon:11582;Parent=Msa1065890-mRNA-1
chr7_2 exon 59800624 59801205 59800624 ID=Msa1065890-mRNA-1:exon:11581;Parent=Msa1065890-mRNA-1
chr7_2 exon 59801399 59801756 59801399 ID=Msa1065890-mRNA-1:exon:11580;Parent=Msa1065890-mRNA-1
chr7_2 exon 59801832 59802166 59801832 ID=Msa1065890-mRNA-1:exon:11579;Parent=Msa1065890-mRNA-1
chr7_2 exon 59802497 59802543 59802497 ID=Msa1065890-mRNA-1:exon:11578;Parent=Msa1065890-mRNA-1
chr7_2 exon 59802621 59802684 59802621 ID=Msa1065890-mRNA-1:exon:11577;Parent=Msa1065890-mRNA-1
chr7_2 exon 59802782 59802904 59802782 ID=Msa1065890-mRNA-1:exon:11576;Parent=Msa1065890-mRNA-1
chr7_2 exon 59802999 59803058 59802999 ID=Msa1065890-mRNA-1:exon:11575;Parent=Msa1065890-mRNA-1
chr7_2 exon 59803131 59803189 59803131 ID=Msa1065890-mRNA-1:exon:11574;Parent=Msa1065890-mRNA-1
chr7_2 exon 59804767 59805025 59804767 ID=Msa1065890-mRNA-1:exon:11573;Parent=Msa1065890-mRNA-1
chr7_2 five_prime_UTR 59804894 59805025 59804894 ID=Msa1065890-mRNA-1:five_prime_utr;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59804767 59804893 59804767 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59803131 59803189 59803131 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59802999 59803058 59802999 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59802782 59802904 59802782 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59802621 59802684 59802621 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59802497 59802543 59802497 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59801832 59802166 59801832 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59801399 59801756 59801399 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59800624 59801205 59800624 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 CDS 59800011 59800295 59800011 ID=Msa1065890-mRNA-1:cds;Parent=Msa1065890-mRNA-1
chr7_2 three_prime_UTR 59799517 59800010 59799517 ID=Msa1065890-mRNA-1:three_prime_utr;Parent=Msa1065890-mRNA-1
Gene Sequence

>Msa1065890

ATGCCGCTCAACAACAGAACCAAAGGAGGATCTTCTTTTCCTCTTCTCGCTTTCGTTCTTCTCTGTCTTCTCGCTCCTCTCATCTTCTTCTTCGCTTCATCTCTTCACACTTCTTCTTCTTCTTCCGATCACAATGATATCTCCGATGTTACAAGCCAACGGGTAGCTCGTTTTATACATTTTCAGGCTACCAAATGGAGAGAACAGAAGGCACTACACGACCTTAAATCTCTTTTTCCAAAAGAGGTTCTTGATGTTATTATGTCCAGCACGAATGATATGGGGCCTTTGAGTCTAGAAAATTTCCGAAATAATCTTTCTGCTTCTTGGAGAGTTGTTGGGTCAAAGACTTCAAACGCAACAAATCAGCTAAACAACCCAGAAACACATCTTAGACAAGAAGTTCAAAAGGAGAAGGAAGGAAGATCTTCAGCAGGTCTTCCTCAGTGGACTGATAGTCCCGTAAGGCTAGCCAGAAGGCAATTAATAGAGAAAAGGATGGCAAAGCGGGCTGCTGAGTTGGTACAACAGGATGATGAAGTTATTGTAAAACTTGAAGATTTAGCTATTGAACGTTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACCTTTGGAGGAAAGAAAATGAAAATGAGAATGCTGATTCTACCGTTCGGTTGATGCGAGATCAGATCATTATGGCTAGGGTATACTTGAGTATTGCAAAGATGAAGAACAAGCTTGAATTGTACCAAGAACTGCAAACACGGCTTAAAGAGAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGACCTACACCAGAGTGAACATGAAAAAATCAAAGAAATGGGCCAAGTTCTTTCTAAGGCGAAAGATCAATTGTATGACTGCAAGTTGGTCATTGGGAAAGTAAGGGCAATGCTACAAACTGCTGATGAGCAGGTTAGAGGCTTGAAGAAACAAAGCACATTCCTTAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCACTGCTTATCGATGCGCCTTACCATAGATTACTACCTCCTCCCACCTGAAAAGAGAAAGTTCCCTATGACTGAGAATTTGGTTAATCCCAGTCTTTATCATTATGCCCTATTCTCAGACAATGTTTTGGCTGCATCTGTTGTTGTCAACTCAACTGTTGTGAATGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAATATGTGGTTTTTATTGAATCCTCCTGGTAAAGCTACAATCTATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCTTACTGCCCAGTCTTGAGACAGCTTGAATCTGCGACAATGAAAGAGTATTATTTCAAGGCAGGCCACCCATCCACTACTGGTGCTTCTAATCTCAAATACAGAAATCCAAAGTATCTTTCAATGCTCAACCACCTGAGGTTCTATCTTCCACAAGTTTATCCGAAATTGGATAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGAATGTGGATCTTCATGGAAAAGTTAACGGTGCAGTTGAAACATGTGGTGAGAGCTTTCACCGATTCGACAAATATCTTAACTTTTCAAATCCACATATTGCAAAAAACTTTGATCCCAATGCTTGTGGTTGGGCATACGGAATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAGGACATTACTGGCATATATCACAGGTGGCAGAATTTGAATGAAGACAGGGTACTATGGAAATTAGGGACATTACCTCCAGGGCTAATGACATTCTATGGATTAACACATCCGCTAAATAAATCATGGCATGTACTCGGTTTGGGTTACAGTCCAAGTATAGATCGTACGGAGATTGAGAATGCAGCAGTTGTACACTATAATGGTAATATGAAGCCATGGTTAGAGATAGCAATGACAAAGTATCGTCCTTACTGGACCAAATATGTCAAGTATAACCATCCTTATCTTAGGAACTGTAAGCTAAGTGAATGGTCTGGATAA
Protein sequence

>Msa1065890

MPLNNRTKGGSSFPLLAFVLLCLLAPLIFFFASSLHTSSSSSDHNDISDVTSQRVARFIHFQATKWREQKALHDLKSLFPKEVLDVIMSSTNDMGPLSLENFRNNLSASWRVVGSKTSNATNQLNNPETHLRQEVQKEKEGRSSAGLPQWTDSPVRLARRQLIEKRMAKRAAELVQQDDEVIVKLEDLAIERSKSVDSAVLGKYNLWRKENENENADSTVRLMRDQIIMARVYLSIAKMKNKLELYQELQTRLKESQRALGEATSDADLHQSEHEKIKEMGQVLSKAKDQLYDCKLVIGKVRAMLQTADEQVRGLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPMTENLVNPSLYHYALFSDNVLAASVVVNSTVVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIYVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPSTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWNVDLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNCKLSEWSG*