Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215930 | XP_024636570.2 | 99.695 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.0 | 1336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215930 | sp|Q9FYQ8|TMN11_ARATH | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215930 | A0A396IID5 | 99.695 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.0 | 1336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0748740 | Msa1215930 | 0.997920 | 4.915040e-252 | -8.615850e-47 |
| Msa0425310 | Msa1215930 | 0.812894 | 3.369872e-51 | -8.615850e-47 |
| Msa0427420 | Msa1215930 | 0.818696 | 1.712722e-52 | -8.615850e-47 |
| Msa0427480 | Msa1215930 | 0.822074 | 2.876970e-53 | -8.615850e-47 |
| Msa0479420 | Msa1215930 | 0.820213 | 7.722438e-53 | -8.615850e-47 |
| Msa1065890 | Msa1215930 | 0.810311 | 1.227788e-50 | -8.615850e-47 |
| Msa0276860 | Msa1215930 | 0.803402 | 3.546085e-49 | -8.615850e-47 |
| Msa1111430 | Msa1215930 | 0.800512 | 1.391802e-48 | -8.615850e-47 |
| Msa1215930 | Msa1404680 | 0.834789 | 2.446003e-56 | -8.615850e-47 |
| Msa1215930 | Msa1455400 | 0.823944 | 1.054424e-53 | -8.615850e-47 |
| Msa0930770 | Msa1215930 | 0.801434 | 9.022487e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215930 | MtrunA17_Chr4g0065301 | 99.695 | 656 | 2 | 0 | 1 | 656 | 1 | 656 | 0.0 | 1336 |
| Msa1215930 | MtrunA17_Chr3g0120461 | 67.530 | 656 | 201 | 7 | 7 | 656 | 10 | 659 | 0.0 | 882 |
| Msa1215930 | MtrunA17_Chr5g0448371 | 67.085 | 638 | 201 | 7 | 23 | 656 | 33 | 665 | 0.0 | 872 |
| Msa1215930 | MtrunA17_Chr8g0342031 | 44.228 | 667 | 313 | 12 | 10 | 656 | 21 | 648 | 0.0 | 560 |
| Msa1215930 | MtrunA17_Chr1g0150181 | 43.891 | 663 | 314 | 12 | 14 | 656 | 13 | 637 | 0.0 | 543 |
| Msa1215930 | MtrunA17_Chr3g0136881 | 44.697 | 660 | 302 | 13 | 19 | 656 | 18 | 636 | 0.0 | 543 |
| Msa1215930 | MtrunA17_Chr8g0375501 | 27.116 | 638 | 378 | 15 | 32 | 656 | 28 | 591 | 1.55e-80 | 266 |
| Msa1215930 | MtrunA17_Chr5g0434001 | 27.201 | 636 | 381 | 16 | 32 | 656 | 43 | 607 | 4.29e-78 | 260 |
| Msa1215930 | MtrunA17_Chr6g0480551 | 27.969 | 640 | 375 | 17 | 29 | 656 | 23 | 588 | 4.33e-78 | 259 |
| Msa1215930 | MtrunA17_Chr4g0026371 | 28.527 | 638 | 366 | 15 | 32 | 656 | 29 | 589 | 2.27e-71 | 242 |
| Msa1215930 | MtrunA17_Chr8g0380651 | 36.905 | 420 | 247 | 9 | 247 | 656 | 178 | 589 | 9.15e-67 | 229 |
| Msa1215930 | MtrunA17_Chr2g0277491 | 36.930 | 417 | 245 | 9 | 250 | 656 | 175 | 583 | 2.30e-63 | 220 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215930 | AT5G35160.2 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| Msa1215930 | AT5G35160.3 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| Msa1215930 | AT5G35160.4 | 85.258 | 658 | 95 | 2 | 1 | 656 | 1 | 658 | 0.0 | 1149 |
| Msa1215930 | AT5G35160.1 | 81.763 | 658 | 90 | 3 | 1 | 656 | 1 | 630 | 0.0 | 1083 |
| Msa1215930 | AT4G12650.1 | 67.593 | 648 | 199 | 6 | 14 | 656 | 11 | 652 | 0.0 | 862 |
| Msa1215930 | AT3G13772.1 | 44.495 | 654 | 304 | 13 | 23 | 656 | 27 | 641 | 0.0 | 555 |
| Msa1215930 | AT5G10840.1 | 43.797 | 669 | 312 | 13 | 13 | 656 | 19 | 648 | 0.0 | 546 |
| Msa1215930 | AT5G25100.1 | 43.498 | 669 | 310 | 13 | 14 | 656 | 18 | 644 | 0.0 | 542 |
| Msa1215930 | AT2G24170.1 | 44.122 | 655 | 307 | 12 | 22 | 656 | 22 | 637 | 0.0 | 540 |
| Msa1215930 | AT5G25100.2 | 43.343 | 676 | 308 | 14 | 14 | 656 | 18 | 651 | 0.0 | 540 |
| Msa1215930 | AT1G55130.1 | 42.511 | 661 | 321 | 12 | 16 | 656 | 16 | 637 | 0.0 | 538 |
| Msa1215930 | AT2G24170.2 | 42.140 | 458 | 211 | 9 | 22 | 462 | 22 | 442 | 5.35e-120 | 365 |
| Msa1215930 | AT2G01970.1 | 27.889 | 649 | 383 | 16 | 20 | 656 | 17 | 592 | 3.13e-84 | 276 |
| Msa1215930 | AT1G08350.3 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.31e-81 | 268 |
| Msa1215930 | AT1G08350.2 | 29.376 | 657 | 370 | 19 | 14 | 656 | 13 | 589 | 3.31e-81 | 268 |
| Msa1215930 | AT1G14670.1 | 28.947 | 646 | 380 | 16 | 20 | 656 | 17 | 592 | 3.19e-80 | 266 |
| Msa1215930 | AT5G37310.1 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.67e-78 | 260 |
| Msa1215930 | AT5G37310.2 | 27.717 | 635 | 378 | 15 | 32 | 656 | 30 | 593 | 3.67e-78 | 260 |
| Msa1215930 | AT1G08350.1 | 28.351 | 582 | 329 | 15 | 88 | 656 | 2 | 508 | 1.41e-67 | 230 |
| Msa1215930 | AT1G08350.4 | 28.881 | 599 | 324 | 19 | 14 | 598 | 13 | 523 | 3.75e-67 | 229 |
| Msa1215930 | AT1G10950.1 | 36.691 | 417 | 246 | 9 | 250 | 656 | 181 | 589 | 9.33e-65 | 224 |
Find 182 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGGTCTCCTCATATTTA+TGG | 0.158373 | 8_1:-77387549 | None:intergenic |
| ATCAAATACAAGATAGTTTA+TGG | 0.166753 | 8_1:-77388820 | None:intergenic |
| CAATCTTGAACTTCCTATTA+TGG | 0.180368 | 8_1:+77388355 | Msa1215930:CDS |
| TTGGGTTCCTCTCTTCATTC+TGG | 0.207220 | 8_1:+77388934 | Msa1215930:CDS |
| GAGGAATTTCTCTAGGAATT+TGG | 0.209657 | 8_1:-77388521 | None:intergenic |
| CCCTGTTGGTATTAAGATTC+AGG | 0.247344 | 8_1:+77387483 | Msa1215930:CDS |
| TCCTTCTTTGTTGTGTATAA+TGG | 0.248630 | 8_1:+77388080 | Msa1215930:CDS |
| TTCTCAGATCCTTCCTTAAC+AGG | 0.259590 | 8_1:-77387616 | None:intergenic |
| GGATCGAGAATTCGCCTTAT+AGG | 0.263740 | 8_1:+77387278 | Msa1215930:CDS |
| ATGGTGATCACTTTCCTTGC+TGG | 0.283624 | 8_1:+77387913 | Msa1215930:CDS |
| GGTGATGGAGTTCAGATTCT+TGG | 0.295289 | 8_1:+77388105 | Msa1215930:CDS |
| ATTTGTTTGGTGTTTCAATC+AGG | 0.295668 | 8_1:+77387064 | Msa1215930:CDS |
| AGCGGCTGGCCTTCTTTAAT+AGG | 0.301449 | 8_1:-77387772 | None:intergenic |
| AATATAACAAAGAGAGAAAA+TGG | 0.302358 | 8_1:-77388402 | None:intergenic |
| TCTTTATCATGTCCAGCATT+TGG | 0.304826 | 8_1:+77388619 | Msa1215930:CDS |
| GACCAATGTGGCTCGTGTTA+TGG | 0.324827 | 8_1:+77387564 | Msa1215930:CDS |
| GGTAAACTATAATAACTAAA+TGG | 0.337219 | 8_1:-77387187 | None:intergenic |
| GGAATTTGGTTGGTTCTAAC+AGG | 0.337867 | 8_1:-77388507 | None:intergenic |
| TACTTTGGCTTCCCCATAAT+AGG | 0.338322 | 8_1:-77388368 | None:intergenic |
| AATCTTGAACTTCCTATTAT+GGG | 0.344499 | 8_1:+77388356 | Msa1215930:CDS |
| TGTTTCTGCAACTCTGTACT+TGG | 0.345457 | 8_1:+77388863 | Msa1215930:CDS |
| CTGGGTCATGGCTATTTGTT+TGG | 0.351997 | 8_1:+77387051 | Msa1215930:CDS |
| TTGTTATATTGCTATTGCTT+TGG | 0.352574 | 8_1:+77388415 | Msa1215930:CDS |
| TTATCTTCTTGAGAACTGTT+AGG | 0.357759 | 8_1:+77387947 | Msa1215930:CDS |
| GTAAACATCTTAAACCTATA+AGG | 0.359924 | 8_1:-77387292 | None:intergenic |
| GGGTATGGTTTCTACCTTCC+GGG | 0.364387 | 8_1:+77387085 | Msa1215930:CDS |
| ACCAATGTGGCTCGTGTTAT+GGG | 0.372249 | 8_1:+77387565 | Msa1215930:CDS |
| CACAACAAAGAAGGATTTGA+TGG | 0.373080 | 8_1:-77388072 | None:intergenic |
| GGTGCTGGCACCCTTCCCTT+TGG | 0.373371 | 8_1:+77388576 | Msa1215930:CDS |
| TCCTGAATCTTAATACCAAC+AGG | 0.375336 | 8_1:-77387484 | None:intergenic |
| CTTATCAAGCTCCTCATAAC+TGG | 0.375567 | 8_1:-77387980 | None:intergenic |
| CTCGATCCTCAATTCGTTGA+TGG | 0.377219 | 8_1:+77387894 | Msa1215930:CDS |
| ACACTTGTTGGTGGCTACTT+TGG | 0.378171 | 8_1:+77388459 | Msa1215930:CDS |
| GTCGATGGATCACATTTAAT+AGG | 0.380805 | 8_1:-77387739 | None:intergenic |
| CTTGGGATACTCACTCTTCA+TGG | 0.381798 | 8_1:+77388881 | Msa1215930:CDS |
| TCTGTCCCACTTACACTTGT+TGG | 0.386331 | 8_1:+77388447 | Msa1215930:CDS |
| TGGAAATCATTCTTTGCCTC+TGG | 0.395692 | 8_1:+77388768 | Msa1215930:CDS |
| GTGATGGAGTTCAGATTCTT+GGG | 0.403271 | 8_1:+77388106 | Msa1215930:CDS |
| TATCATGTCCAGCATTTGGA+TGG | 0.407267 | 8_1:+77388623 | Msa1215930:CDS |
| TACCCACACAATTATGCAAT+TGG | 0.410515 | 8_1:+77387112 | Msa1215930:CDS |
| GTACATGGTTGTTGGGTTTG+AGG | 0.411511 | 8_1:+77387645 | Msa1215930:CDS |
| TAAAGAACAGCTCAATGAAA+AGG | 0.422226 | 8_1:-77388602 | None:intergenic |
| TGGTTGGAAGCTTGTGGTGG+GGG | 0.425246 | 8_1:+77388035 | Msa1215930:CDS |
| AAGCCGGGGTACATGGTTGT+TGG | 0.426097 | 8_1:+77387637 | Msa1215930:CDS |
| GTGCGGCGATCAGAAGGGTT+GGG | 0.426321 | 8_1:+77388275 | Msa1215930:CDS |
| AGCCGGGGTACATGGTTGTT+GGG | 0.426832 | 8_1:+77387638 | Msa1215930:CDS |
| ATATCAAGTGGCCATCTAGA+TGG | 0.430148 | 8_1:+77387830 | Msa1215930:CDS |
| TCTGGTTGGAAGCTTGTGGT+GGG | 0.432889 | 8_1:+77388033 | Msa1215930:CDS |
| AAGTACAGAGTTGCAGAAAC+AGG | 0.445695 | 8_1:-77388861 | None:intergenic |
| CAGATGAATGAGGAGTTATC+TGG | 0.450439 | 8_1:+77388015 | Msa1215930:CDS |
| ATCTGGTTGGAAGCTTGTGG+TGG | 0.453164 | 8_1:+77388032 | Msa1215930:CDS |
| ACAATATTGTTTGCTGCACT+TGG | 0.457516 | 8_1:+77388141 | Msa1215930:CDS |
| ATGGAATGGCTCCTGTACTT+TGG | 0.461027 | 8_1:-77388383 | None:intergenic |
| TTGGTGTTTCAATCAGGGTA+TGG | 0.463389 | 8_1:+77387070 | Msa1215930:CDS |
| TGCACCTCTGTGTGGAGGAT+TGG | 0.467543 | 8_1:+77388736 | Msa1215930:CDS |
| TCTTCTGTGAAGTTGGATTG+AGG | 0.467795 | 8_1:+77388975 | Msa1215930:CDS |
| ATCTGAGAAGCCGGGGTACA+TGG | 0.468660 | 8_1:+77387630 | Msa1215930:CDS |
| AGGGTATGGTTTCTACCTTC+CGG | 0.473489 | 8_1:+77387084 | Msa1215930:CDS |
| GAGGGATCTGGCCAGTTATG+AGG | 0.477456 | 8_1:+77387969 | Msa1215930:CDS |
| GAGGATGAAGAAGGCAATAC+CGG | 0.480232 | 8_1:-77388331 | None:intergenic |
| TGTTCTTGTCCATAAATATG+AGG | 0.481033 | 8_1:+77387540 | Msa1215930:CDS |
| AGGGTTGGGTTTCAGTTGCA+TGG | 0.484208 | 8_1:+77388289 | Msa1215930:CDS |
| AAGTAAGCATCCCATCTAGA+TGG | 0.484918 | 8_1:-77387841 | None:intergenic |
| CGTGCGGCGATCAGAAGGGT+TGG | 0.485992 | 8_1:+77388274 | Msa1215930:CDS |
| AAGGATAGTGCTGAGAATCT+AGG | 0.486339 | 8_1:+77387235 | Msa1215930:CDS |
| GTCCCACTTACACTTGTTGG+TGG | 0.488890 | 8_1:+77388450 | Msa1215930:CDS |
| TTTGTTTGGTGTTTCAATCA+GGG | 0.489983 | 8_1:+77387065 | Msa1215930:CDS |
| CAAATTCAAATTCTGGGTCA+TGG | 0.490284 | 8_1:+77387039 | Msa1215930:CDS |
| TTGTGTATAATGGTTGGTGA+TGG | 0.492346 | 8_1:+77388090 | Msa1215930:CDS |
| ACTCGCGTGCGGCGATCAGA+AGG | 0.493442 | 8_1:+77388269 | Msa1215930:CDS |
| TACCTACGAGGTAACGTTTG+AGG | 0.495432 | 8_1:+77387801 | Msa1215930:CDS |
| ATGGGATGCTTACTTGAAGA+TGG | 0.497074 | 8_1:+77387849 | Msa1215930:CDS |
| CAGTTATGAGGAGCTTGATA+AGG | 0.497655 | 8_1:+77387981 | Msa1215930:CDS |
| ATGATACTTGGTATTGCTGC+TGG | 0.498593 | 8_1:+77388219 | Msa1215930:CDS |
| CTCAATGAAAAGGGTTCCAA+AGG | 0.503492 | 8_1:-77388592 | None:intergenic |
| GATCGAGAACCAATGGACTT+TGG | 0.504056 | 8_1:-77387878 | None:intergenic |
| TGTTGGTGACAGGCACAGTT+GGG | 0.507832 | 8_1:+77388916 | Msa1215930:CDS |
| AAAGCTGCTTGTTTCTTCCC+CGG | 0.509099 | 8_1:+77388312 | Msa1215930:CDS |
| TGCAATTGGTGATGAATTGT+CGG | 0.510847 | 8_1:+77387126 | Msa1215930:CDS |
| TGGAGGATTGGAGATGGTGG+TGG | 0.512530 | 8_1:+77388748 | Msa1215930:CDS |
| CAAGAACATTAAATCTAAGA+TGG | 0.515293 | 8_1:-77387525 | None:intergenic |
| CTAGCAATCATGTTGGTGAC+AGG | 0.515495 | 8_1:+77388906 | Msa1215930:CDS |
| GAGAACTGTTAGGAGGGATC+TGG | 0.516130 | 8_1:+77387957 | Msa1215930:CDS |
| GAATCTAGGTGAGCTTCTCA+TGG | 0.516684 | 8_1:+77387249 | Msa1215930:CDS |
| AAAGAACAGCTCAATGAAAA+GGG | 0.520078 | 8_1:-77388601 | None:intergenic |
| TCTTGTGGTGGTTTGTGCTG+AGG | 0.521715 | 8_1:+77388692 | Msa1215930:CDS |
| TAGCCACCAACAAGTGTAAG+TGG | 0.522399 | 8_1:-77388453 | None:intergenic |
| GTGGCTCGTGTTATGGGAAC+CGG | 0.523916 | 8_1:+77387571 | Msa1215930:CDS |
| ACCTGTGATAAGTGTTCCAC+GGG | 0.526211 | 8_1:-77388181 | None:intergenic |
| TGATCACCATCAACGAATTG+AGG | 0.527193 | 8_1:-77387900 | None:intergenic |
| TTCATGTCACCGGCCTCCCG+TGG | 0.527959 | 8_1:+77388165 | Msa1215930:CDS |
| AACACGGCCCATCCAAATGC+TGG | 0.527959 | 8_1:-77388631 | None:intergenic |
| AAGGAAGGATCTGAGAAGCC+GGG | 0.528711 | 8_1:+77387622 | Msa1215930:CDS |
| AATTTCTCTAGGAATTTGGT+TGG | 0.529324 | 8_1:-77388517 | None:intergenic |
| ATAAGTGTTCCACGGGAGGC+CGG | 0.530499 | 8_1:-77388174 | None:intergenic |
| ACCATTATACACAACAAAGA+AGG | 0.534847 | 8_1:-77388081 | None:intergenic |
| CTGGTTGGAAGCTTGTGGTG+GGG | 0.535511 | 8_1:+77388034 | Msa1215930:CDS |
| AATCATCTCAGCCGCATCAC+CGG | 0.536909 | 8_1:-77387590 | None:intergenic |
| TCTTTGTTGTGTATAATGGT+TGG | 0.537010 | 8_1:+77388084 | Msa1215930:CDS |
| TCACCAATTGCATAATTGTG+TGG | 0.538717 | 8_1:-77387115 | None:intergenic |
| CTTCTTGAGAACTGTTAGGA+GGG | 0.539675 | 8_1:+77387951 | Msa1215930:CDS |
| ATAGGCATTGCCACAGTCGA+TGG | 0.540885 | 8_1:-77387754 | None:intergenic |
| CGCTGCTGAGGAATTTCTCT+AGG | 0.541640 | 8_1:-77388528 | None:intergenic |
| TAAGGAAGGATCTGAGAAGC+CGG | 0.543364 | 8_1:+77387621 | Msa1215930:CDS |
| TCTTCTTGAGAACTGTTAGG+AGG | 0.545064 | 8_1:+77387950 | Msa1215930:CDS |
| AGGATGAAGAAGGCAATACC+GGG | 0.546046 | 8_1:-77388330 | None:intergenic |
| ATCATGTCCAGCATTTGGAT+GGG | 0.548416 | 8_1:+77388624 | Msa1215930:CDS |
| TATCAAGTGGCCATCTAGAT+GGG | 0.549497 | 8_1:+77387831 | Msa1215930:CDS |
| GGATCACATTTAATAGGTGA+CGG | 0.552812 | 8_1:-77387733 | None:intergenic |
| TGGTGGCTACTTTGGAGCAA+AGG | 0.554397 | 8_1:+77388467 | Msa1215930:CDS |
| AATCTAGGTGAGCTTCTCAT+GGG | 0.557996 | 8_1:+77387250 | Msa1215930:CDS |
| ATGTTGGTGACAGGCACAGT+TGG | 0.557996 | 8_1:+77388915 | Msa1215930:CDS |
| GGATGCTTACTTGAAGATGG+AGG | 0.561604 | 8_1:+77387852 | Msa1215930:CDS |
| TTCTTCGTAAAACGAATAGC+AGG | 0.562872 | 8_1:-77387430 | None:intergenic |
| TGGAGGGAGCCAAAGTCCAT+TGG | 0.566645 | 8_1:+77387869 | Msa1215930:CDS |
| TGAAAAGGGTTCCAAAGGGA+AGG | 0.570056 | 8_1:-77388587 | None:intergenic |
| CACCAATTGCATAATTGTGT+GGG | 0.570143 | 8_1:-77387114 | None:intergenic |
| TCTCAGATCCTTCCTTAACA+GGG | 0.572609 | 8_1:-77387615 | None:intergenic |
| TGGAGTTCAGATTCTTGGGA+TGG | 0.573301 | 8_1:+77388110 | Msa1215930:CDS |
| GTGGCAATGCCTATTAAAGA+AGG | 0.576450 | 8_1:+77387763 | Msa1215930:CDS |
| GATCACATTTAATAGGTGAC+GGG | 0.577005 | 8_1:-77387732 | None:intergenic |
| GTGTGGAGGATTGGAGATGG+TGG | 0.579374 | 8_1:+77388745 | Msa1215930:CDS |
| CAAGATTGTGAGGATGAAGA+AGG | 0.582999 | 8_1:-77388340 | None:intergenic |
| GATGTTTACTAATGAGTCTG+AGG | 0.583355 | 8_1:+77387306 | Msa1215930:CDS |
| GTTATCTGGTTGGAAGCTTG+TGG | 0.588427 | 8_1:+77388029 | Msa1215930:CDS |
| TCCCATAACACGAGCCACAT+TGG | 0.588765 | 8_1:-77387566 | None:intergenic |
| TGCACTTGGATTCATGTCAC+CGG | 0.589020 | 8_1:+77388155 | Msa1215930:CDS |
| GTTTCTGCAACTCTGTACTT+GGG | 0.589552 | 8_1:+77388864 | Msa1215930:CDS |
| AGATGGACTGGGTACCCTGT+TGG | 0.591209 | 8_1:+77387469 | Msa1215930:CDS |
| ATCTTGAACTTCCTATTATG+GGG | 0.592990 | 8_1:+77388357 | Msa1215930:CDS |
| TTATGGGGAAGCCAAAGTAC+AGG | 0.594384 | 8_1:+77388372 | Msa1215930:CDS |
| AATTGAGGATCGAGAACCAA+TGG | 0.597715 | 8_1:-77387885 | None:intergenic |
| GTTATGTTTCAGTTCGACTG+TGG | 0.597723 | 8_1:+77388241 | Msa1215930:CDS |
| TCCCGTGGAACACTTATCAC+AGG | 0.598031 | 8_1:+77388180 | Msa1215930:CDS |
| CTCGCGTGCGGCGATCAGAA+GGG | 0.598186 | 8_1:+77388270 | Msa1215930:CDS |
| CATGGTTCTAGCAATCATGT+TGG | 0.600699 | 8_1:+77388899 | Msa1215930:CDS |
| AAGAAGGATTTGATGGAGCA+CGG | 0.601804 | 8_1:-77388065 | None:intergenic |
| TACCTGTGATAAGTGTTCCA+CGG | 0.602595 | 8_1:-77388182 | None:intergenic |
| TCAATGAAAAGGGTTCCAAA+GGG | 0.608377 | 8_1:-77388591 | None:intergenic |
| TAATTGTGTGGGTAACTACC+CGG | 0.608773 | 8_1:-77387103 | None:intergenic |
| AACAAAGAGAGAAAATGGAA+TGG | 0.610331 | 8_1:-77388397 | None:intergenic |
| AGCTCAAGCACAGATGAATG+AGG | 0.617907 | 8_1:+77388005 | Msa1215930:CDS |
| CTCAGATCCTTCCTTAACAG+GGG | 0.621573 | 8_1:-77387614 | None:intergenic |
| ATCTAGGTGAGCTTCTCATG+GGG | 0.627364 | 8_1:+77387251 | Msa1215930:CDS |
| TCTGTGTGGAGGATTGGAGA+TGG | 0.630692 | 8_1:+77388742 | Msa1215930:CDS |
| CACGACGGATACCGCTGCTG+AGG | 0.631043 | 8_1:-77388540 | None:intergenic |
| GATGCTTACTTGAAGATGGA+GGG | 0.631078 | 8_1:+77387853 | Msa1215930:CDS |
| GAAAAGGGTTCCAAAGGGAA+GGG | 0.631885 | 8_1:-77388586 | None:intergenic |
| TGAATGAGGAGTTATCTGGT+TGG | 0.637187 | 8_1:+77388019 | Msa1215930:CDS |
| TCAGATCCTTCCTTAACAGG+GGG | 0.637373 | 8_1:-77387613 | None:intergenic |
| TGTGATAAGTGTTCCACGGG+AGG | 0.637733 | 8_1:-77388178 | None:intergenic |
| TGGTTCTAACAGGATACTCA+AGG | 0.638465 | 8_1:-77388497 | None:intergenic |
| CTCAGCAGCGGTATCCGTCG+TGG | 0.639819 | 8_1:+77388541 | Msa1215930:CDS |
| ACCCGAAAACATAGTAAACA+CGG | 0.641523 | 8_1:-77388647 | None:intergenic |
| TTGAGGAGAGTGATATCAAG+TGG | 0.642653 | 8_1:+77387818 | Msa1215930:CDS |
| GCATTATGCATAATACTACA+AGG | 0.643881 | 8_1:-77387673 | None:intergenic |
| ATAGGAAGTTCAAGATTGTG+AGG | 0.645085 | 8_1:-77388350 | None:intergenic |
| AACCCAACAACCATGTACCC+CGG | 0.645248 | 8_1:-77387640 | None:intergenic |
| CTAGAGAAATTCCTCAGCAG+CGG | 0.650903 | 8_1:+77388529 | Msa1215930:CDS |
| TTACATGCACCTCTGTGTGG+AGG | 0.651300 | 8_1:+77388731 | Msa1215930:CDS |
| AACTTACATGCACCTCTGTG+TGG | 0.652266 | 8_1:+77388728 | Msa1215930:CDS |
| CTCCTCAAACGTTACCTCGT+AGG | 0.655284 | 8_1:-77387803 | None:intergenic |
| AGGAAGGATCTGAGAAGCCG+GGG | 0.657385 | 8_1:+77387623 | Msa1215930:CDS |
| AGCCACCAACAAGTGTAAGT+GGG | 0.658396 | 8_1:-77388452 | None:intergenic |
| ACCTCGTAGGTAAACGCAAG+CGG | 0.659065 | 8_1:-77387790 | None:intergenic |
| TGGTGATGAATTGTCGGTGA+AGG | 0.659099 | 8_1:+77387132 | Msa1215930:CDS |
| GCCGCTTGCGTTTACCTACG+AGG | 0.660211 | 8_1:+77387789 | Msa1215930:CDS |
| ACACGAACCAGAATGAAGAG+AGG | 0.661550 | 8_1:-77388941 | None:intergenic |
| TGTTATGGGAACCGGTGATG+CGG | 0.663081 | 8_1:+77387579 | Msa1215930:CDS |
| TAACAAGAACAATACCAGCA+AGG | 0.672966 | 8_1:-77387927 | None:intergenic |
| CTAACAGGATACTCAAGGTG+AGG | 0.675817 | 8_1:-77388492 | None:intergenic |
| TTTGATCTCAAGAATCTGAG+TGG | 0.676176 | 8_1:+77388837 | Msa1215930:CDS |
| CTGTGGAGAACACTCGCGTG+CGG | 0.676822 | 8_1:+77388258 | Msa1215930:CDS |
| CCTGAATCTTAATACCAACA+GGG | 0.677762 | 8_1:-77387483 | None:intergenic |
| GTACAGTGCAACAGAACCAG+AGG | 0.685889 | 8_1:-77388784 | None:intergenic |
| TAAATGTGATCCATCGACTG+TGG | 0.688100 | 8_1:+77387744 | Msa1215930:CDS |
| CCTAGAACTAAAAGCCACGA+CGG | 0.690997 | 8_1:-77388555 | None:intergenic |
| TGTGTGGGTAACTACCCGGA+AGG | 0.693942 | 8_1:-77387099 | None:intergenic |
| TCTAGGTGAGCTTCTCATGG+GGG | 0.697948 | 8_1:+77387252 | Msa1215930:CDS |
| TAAATATGAGGAGACCAATG+TGG | 0.708708 | 8_1:+77387552 | Msa1215930:CDS |
| ATCTCCAATCCTCCACACAG+AGG | 0.744593 | 8_1:-77388740 | None:intergenic |
| GGATGAAGAAGGCAATACCG+GGG | 0.767636 | 8_1:-77388329 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCACAAATTCAAATTCT+GGG | + | chr8_1:77387033-77387052 | Msa1215930:CDS | 20.0% |
| !! | GGTAAACTATAATAACTAAA+TGG | - | chr8_1:77387190-77387209 | None:intergenic | 20.0% |
| !! | AATATAACAAAGAGAGAAAA+TGG | - | chr8_1:77388405-77388424 | None:intergenic | 20.0% |
| !! | ATCAAATACAAGATAGTTTA+TGG | - | chr8_1:77388823-77388842 | None:intergenic | 20.0% |
| !!! | TTTTCACAAATTCAAATTCT+GGG | + | chr8_1:77387033-77387052 | Msa1215930:CDS | 20.0% |
| !! | GGTAAACTATAATAACTAAA+TGG | - | chr8_1:77387190-77387209 | None:intergenic | 20.0% |
| !! | AATATAACAAAGAGAGAAAA+TGG | - | chr8_1:77388405-77388424 | None:intergenic | 20.0% |
| !! | ATCAAATACAAGATAGTTTA+TGG | - | chr8_1:77388823-77388842 | None:intergenic | 20.0% |
| !! | CTTTTCACAAATTCAAATTC+TGG | + | chr8_1:77387032-77387051 | Msa1215930:CDS | 25.0% |
| ! | GTAAACATCTTAAACCTATA+AGG | - | chr8_1:77387295-77387314 | None:intergenic | 25.0% |
| ! | CAAGAACATTAAATCTAAGA+TGG | - | chr8_1:77387528-77387547 | None:intergenic | 25.0% |
| ! | AATCTTGAACTTCCTATTAT+GGG | + | chr8_1:77388356-77388375 | Msa1215930:CDS | 25.0% |
| !! | TTGTTATATTGCTATTGCTT+TGG | + | chr8_1:77388415-77388434 | Msa1215930:CDS | 25.0% |
| !! | CTTTTCACAAATTCAAATTC+TGG | + | chr8_1:77387032-77387051 | Msa1215930:CDS | 25.0% |
| ! | GTAAACATCTTAAACCTATA+AGG | - | chr8_1:77387295-77387314 | None:intergenic | 25.0% |
| ! | CAAGAACATTAAATCTAAGA+TGG | - | chr8_1:77387528-77387547 | None:intergenic | 25.0% |
| ! | AATCTTGAACTTCCTATTAT+GGG | + | chr8_1:77388356-77388375 | Msa1215930:CDS | 25.0% |
| !! | TTGTTATATTGCTATTGCTT+TGG | + | chr8_1:77388415-77388434 | Msa1215930:CDS | 25.0% |
| !! | ATTTGTTTGGTGTTTCAATC+AGG | + | chr8_1:77387064-77387083 | Msa1215930:CDS | 30.0% |
| !! | TTTGTTTGGTGTTTCAATCA+GGG | + | chr8_1:77387065-77387084 | Msa1215930:CDS | 30.0% |
| ! | TTACCTTTTTGTAAACCTCA+AGG | + | chr8_1:77387205-77387224 | Msa1215930:CDS | 30.0% |
| ! | TACCTTTTTGTAAACCTCAA+GGG | + | chr8_1:77387206-77387225 | Msa1215930:CDS | 30.0% |
| AGTTCAAGATCTTGAAAAAG+AGG | + | chr8_1:77387365-77387384 | Msa1215930:CDS | 30.0% | |
| !! | AAGATGAGTACTTTTTGAGA+TGG | + | chr8_1:77387452-77387471 | Msa1215930:CDS | 30.0% |
| TGTTCTTGTCCATAAATATG+AGG | + | chr8_1:77387540-77387559 | Msa1215930:CDS | 30.0% | |
| GCATTATGCATAATACTACA+AGG | - | chr8_1:77387676-77387695 | None:intergenic | 30.0% | |
| TTATCTTCTTGAGAACTGTT+AGG | + | chr8_1:77387947-77387966 | Msa1215930:CDS | 30.0% | |
| ! | TCCTTCTTTGTTGTGTATAA+TGG | + | chr8_1:77388080-77388099 | Msa1215930:CDS | 30.0% |
| ACCATTATACACAACAAAGA+AGG | - | chr8_1:77388084-77388103 | None:intergenic | 30.0% | |
| ! | TCTTTGTTGTGTATAATGGT+TGG | + | chr8_1:77388084-77388103 | Msa1215930:CDS | 30.0% |
| !! | CTGTTTTTCTACATGATACT+TGG | + | chr8_1:77388207-77388226 | Msa1215930:CDS | 30.0% |
| CAATCTTGAACTTCCTATTA+TGG | + | chr8_1:77388355-77388374 | Msa1215930:CDS | 30.0% | |
| ATCTTGAACTTCCTATTATG+GGG | + | chr8_1:77388357-77388376 | Msa1215930:CDS | 30.0% | |
| AACAAAGAGAGAAAATGGAA+TGG | - | chr8_1:77388400-77388419 | None:intergenic | 30.0% | |
| ! | AATTTCTCTAGGAATTTGGT+TGG | - | chr8_1:77388520-77388539 | None:intergenic | 30.0% |
| AAAGAACAGCTCAATGAAAA+GGG | - | chr8_1:77388604-77388623 | None:intergenic | 30.0% | |
| TAAAGAACAGCTCAATGAAA+AGG | - | chr8_1:77388605-77388624 | None:intergenic | 30.0% | |
| !!! | CATTGTTTTGATTCTTCTTG+TGG | + | chr8_1:77388677-77388696 | Msa1215930:CDS | 30.0% |
| !! | ATTTGTTTGGTGTTTCAATC+AGG | + | chr8_1:77387064-77387083 | Msa1215930:CDS | 30.0% |
| !! | TTTGTTTGGTGTTTCAATCA+GGG | + | chr8_1:77387065-77387084 | Msa1215930:CDS | 30.0% |
| ! | TTACCTTTTTGTAAACCTCA+AGG | + | chr8_1:77387205-77387224 | Msa1215930:CDS | 30.0% |
| ! | TACCTTTTTGTAAACCTCAA+GGG | + | chr8_1:77387206-77387225 | Msa1215930:CDS | 30.0% |
| AGTTCAAGATCTTGAAAAAG+AGG | + | chr8_1:77387365-77387384 | Msa1215930:CDS | 30.0% | |
| !! | AAGATGAGTACTTTTTGAGA+TGG | + | chr8_1:77387452-77387471 | Msa1215930:CDS | 30.0% |
| TGTTCTTGTCCATAAATATG+AGG | + | chr8_1:77387540-77387559 | Msa1215930:CDS | 30.0% | |
| GCATTATGCATAATACTACA+AGG | - | chr8_1:77387676-77387695 | None:intergenic | 30.0% | |
| TTATCTTCTTGAGAACTGTT+AGG | + | chr8_1:77387947-77387966 | Msa1215930:CDS | 30.0% | |
| ! | TCCTTCTTTGTTGTGTATAA+TGG | + | chr8_1:77388080-77388099 | Msa1215930:CDS | 30.0% |
| ACCATTATACACAACAAAGA+AGG | - | chr8_1:77388084-77388103 | None:intergenic | 30.0% | |
| ! | TCTTTGTTGTGTATAATGGT+TGG | + | chr8_1:77388084-77388103 | Msa1215930:CDS | 30.0% |
| !! | CTGTTTTTCTACATGATACT+TGG | + | chr8_1:77388207-77388226 | Msa1215930:CDS | 30.0% |
| CAATCTTGAACTTCCTATTA+TGG | + | chr8_1:77388355-77388374 | Msa1215930:CDS | 30.0% | |
| ATCTTGAACTTCCTATTATG+GGG | + | chr8_1:77388357-77388376 | Msa1215930:CDS | 30.0% | |
| AACAAAGAGAGAAAATGGAA+TGG | - | chr8_1:77388400-77388419 | None:intergenic | 30.0% | |
| ! | AATTTCTCTAGGAATTTGGT+TGG | - | chr8_1:77388520-77388539 | None:intergenic | 30.0% |
| AAAGAACAGCTCAATGAAAA+GGG | - | chr8_1:77388604-77388623 | None:intergenic | 30.0% | |
| TAAAGAACAGCTCAATGAAA+AGG | - | chr8_1:77388605-77388624 | None:intergenic | 30.0% | |
| !!! | CATTGTTTTGATTCTTCTTG+TGG | + | chr8_1:77388677-77388696 | Msa1215930:CDS | 30.0% |
| CAAATTCAAATTCTGGGTCA+TGG | + | chr8_1:77387039-77387058 | Msa1215930:CDS | 35.0% | |
| TACCCACACAATTATGCAAT+TGG | + | chr8_1:77387112-77387131 | Msa1215930:CDS | 35.0% | |
| CACCAATTGCATAATTGTGT+GGG | - | chr8_1:77387117-77387136 | None:intergenic | 35.0% | |
| TCACCAATTGCATAATTGTG+TGG | - | chr8_1:77387118-77387137 | None:intergenic | 35.0% | |
| !! | TGCAATTGGTGATGAATTGT+CGG | + | chr8_1:77387126-77387145 | Msa1215930:CDS | 35.0% |
| ! | ACCTTTTTGTAAACCTCAAG+GGG | + | chr8_1:77387207-77387226 | Msa1215930:CDS | 35.0% |
| GATGTTTACTAATGAGTCTG+AGG | + | chr8_1:77387306-77387325 | Msa1215930:CDS | 35.0% | |
| TTCTTCGTAAAACGAATAGC+AGG | - | chr8_1:77387433-77387452 | None:intergenic | 35.0% | |
| !!! | AGTACTTTTTGAGATGGACT+GGG | + | chr8_1:77387458-77387477 | Msa1215930:CDS | 35.0% |
| CCTGAATCTTAATACCAACA+GGG | - | chr8_1:77387486-77387505 | None:intergenic | 35.0% | |
| TCCTGAATCTTAATACCAAC+AGG | - | chr8_1:77387487-77387506 | None:intergenic | 35.0% | |
| ! | CATTGGTCTCCTCATATTTA+TGG | - | chr8_1:77387552-77387571 | None:intergenic | 35.0% |
| TAAATATGAGGAGACCAATG+TGG | + | chr8_1:77387552-77387571 | Msa1215930:CDS | 35.0% | |
| GATCACATTTAATAGGTGAC+GGG | - | chr8_1:77387735-77387754 | None:intergenic | 35.0% | |
| GGATCACATTTAATAGGTGA+CGG | - | chr8_1:77387736-77387755 | None:intergenic | 35.0% | |
| GTCGATGGATCACATTTAAT+AGG | - | chr8_1:77387742-77387761 | None:intergenic | 35.0% | |
| TAACAAGAACAATACCAGCA+AGG | - | chr8_1:77387930-77387949 | None:intergenic | 35.0% | |
| CACAACAAAGAAGGATTTGA+TGG | - | chr8_1:77388075-77388094 | None:intergenic | 35.0% | |
| !! | TTGTGTATAATGGTTGGTGA+TGG | + | chr8_1:77388090-77388109 | Msa1215930:CDS | 35.0% |
| ! | ACAATATTGTTTGCTGCACT+TGG | + | chr8_1:77388141-77388160 | Msa1215930:CDS | 35.0% |
| ATAGGAAGTTCAAGATTGTG+AGG | - | chr8_1:77388353-77388372 | None:intergenic | 35.0% | |
| ! | GAGGAATTTCTCTAGGAATT+TGG | - | chr8_1:77388524-77388543 | None:intergenic | 35.0% |
| TCAATGAAAAGGGTTCCAAA+GGG | - | chr8_1:77388594-77388613 | None:intergenic | 35.0% | |
| TCTTTATCATGTCCAGCATT+TGG | + | chr8_1:77388619-77388638 | Msa1215930:CDS | 35.0% | |
| ACCCGAAAACATAGTAAACA+CGG | - | chr8_1:77388650-77388669 | None:intergenic | 35.0% | |
| !!! | TGTTTTGATTCTTCTTGTGG+TGG | + | chr8_1:77388680-77388699 | Msa1215930:CDS | 35.0% |
| TTTGATCTCAAGAATCTGAG+TGG | + | chr8_1:77388837-77388856 | Msa1215930:CDS | 35.0% | |
| !! | CTTGTTTTCTTCTGTGAAGT+TGG | + | chr8_1:77388968-77388987 | Msa1215930:CDS | 35.0% |
| CAAATTCAAATTCTGGGTCA+TGG | + | chr8_1:77387039-77387058 | Msa1215930:CDS | 35.0% | |
| TACCCACACAATTATGCAAT+TGG | + | chr8_1:77387112-77387131 | Msa1215930:CDS | 35.0% | |
| CACCAATTGCATAATTGTGT+GGG | - | chr8_1:77387117-77387136 | None:intergenic | 35.0% | |
| TCACCAATTGCATAATTGTG+TGG | - | chr8_1:77387118-77387137 | None:intergenic | 35.0% | |
| !! | TGCAATTGGTGATGAATTGT+CGG | + | chr8_1:77387126-77387145 | Msa1215930:CDS | 35.0% |
| ! | ACCTTTTTGTAAACCTCAAG+GGG | + | chr8_1:77387207-77387226 | Msa1215930:CDS | 35.0% |
| GATGTTTACTAATGAGTCTG+AGG | + | chr8_1:77387306-77387325 | Msa1215930:CDS | 35.0% | |
| TTCTTCGTAAAACGAATAGC+AGG | - | chr8_1:77387433-77387452 | None:intergenic | 35.0% | |
| !!! | AGTACTTTTTGAGATGGACT+GGG | + | chr8_1:77387458-77387477 | Msa1215930:CDS | 35.0% |
| CCTGAATCTTAATACCAACA+GGG | - | chr8_1:77387486-77387505 | None:intergenic | 35.0% | |
| TCCTGAATCTTAATACCAAC+AGG | - | chr8_1:77387487-77387506 | None:intergenic | 35.0% | |
| ! | CATTGGTCTCCTCATATTTA+TGG | - | chr8_1:77387552-77387571 | None:intergenic | 35.0% |
| TAAATATGAGGAGACCAATG+TGG | + | chr8_1:77387552-77387571 | Msa1215930:CDS | 35.0% | |
| GATCACATTTAATAGGTGAC+GGG | - | chr8_1:77387735-77387754 | None:intergenic | 35.0% | |
| GGATCACATTTAATAGGTGA+CGG | - | chr8_1:77387736-77387755 | None:intergenic | 35.0% | |
| GTCGATGGATCACATTTAAT+AGG | - | chr8_1:77387742-77387761 | None:intergenic | 35.0% | |
| TAACAAGAACAATACCAGCA+AGG | - | chr8_1:77387930-77387949 | None:intergenic | 35.0% | |
| CACAACAAAGAAGGATTTGA+TGG | - | chr8_1:77388075-77388094 | None:intergenic | 35.0% | |
| !! | TTGTGTATAATGGTTGGTGA+TGG | + | chr8_1:77388090-77388109 | Msa1215930:CDS | 35.0% |
| ! | ACAATATTGTTTGCTGCACT+TGG | + | chr8_1:77388141-77388160 | Msa1215930:CDS | 35.0% |
| ATAGGAAGTTCAAGATTGTG+AGG | - | chr8_1:77388353-77388372 | None:intergenic | 35.0% | |
| ! | GAGGAATTTCTCTAGGAATT+TGG | - | chr8_1:77388524-77388543 | None:intergenic | 35.0% |
| TCAATGAAAAGGGTTCCAAA+GGG | - | chr8_1:77388594-77388613 | None:intergenic | 35.0% | |
| TCTTTATCATGTCCAGCATT+TGG | + | chr8_1:77388619-77388638 | Msa1215930:CDS | 35.0% | |
| ACCCGAAAACATAGTAAACA+CGG | - | chr8_1:77388650-77388669 | None:intergenic | 35.0% | |
| !!! | TGTTTTGATTCTTCTTGTGG+TGG | + | chr8_1:77388680-77388699 | Msa1215930:CDS | 35.0% |
| TTTGATCTCAAGAATCTGAG+TGG | + | chr8_1:77388837-77388856 | Msa1215930:CDS | 35.0% | |
| !! | CTTGTTTTCTTCTGTGAAGT+TGG | + | chr8_1:77388968-77388987 | Msa1215930:CDS | 35.0% |
| ! | TTGGTGTTTCAATCAGGGTA+TGG | + | chr8_1:77387070-77387089 | Msa1215930:CDS | 40.0% |
| TAATTGTGTGGGTAACTACC+CGG | - | chr8_1:77387106-77387125 | None:intergenic | 40.0% | |
| ! | CCTTTTTGTAAACCTCAAGG+GGG | + | chr8_1:77387208-77387227 | Msa1215930:CDS | 40.0% |
| ! | AAGGATAGTGCTGAGAATCT+AGG | + | chr8_1:77387235-77387254 | Msa1215930:CDS | 40.0% |
| AATCTAGGTGAGCTTCTCAT+GGG | + | chr8_1:77387250-77387269 | Msa1215930:CDS | 40.0% | |
| !!! | GAGTACTTTTTGAGATGGAC+TGG | + | chr8_1:77387457-77387476 | Msa1215930:CDS | 40.0% |
| CCCTGTTGGTATTAAGATTC+AGG | + | chr8_1:77387483-77387502 | Msa1215930:CDS | 40.0% | |
| TCTCAGATCCTTCCTTAACA+GGG | - | chr8_1:77387618-77387637 | None:intergenic | 40.0% | |
| TTCTCAGATCCTTCCTTAAC+AGG | - | chr8_1:77387619-77387638 | None:intergenic | 40.0% | |
| ! | TAAATGTGATCCATCGACTG+TGG | + | chr8_1:77387744-77387763 | Msa1215930:CDS | 40.0% |
| GTGGCAATGCCTATTAAAGA+AGG | + | chr8_1:77387763-77387782 | Msa1215930:CDS | 40.0% | |
| TTGAGGAGAGTGATATCAAG+TGG | + | chr8_1:77387818-77387837 | Msa1215930:CDS | 40.0% | |
| ATATCAAGTGGCCATCTAGA+TGG | + | chr8_1:77387830-77387849 | Msa1215930:CDS | 40.0% | |
| TATCAAGTGGCCATCTAGAT+GGG | + | chr8_1:77387831-77387850 | Msa1215930:CDS | 40.0% | |
| AAGTAAGCATCCCATCTAGA+TGG | - | chr8_1:77387844-77387863 | None:intergenic | 40.0% | |
| ATGGGATGCTTACTTGAAGA+TGG | + | chr8_1:77387849-77387868 | Msa1215930:CDS | 40.0% | |
| GATGCTTACTTGAAGATGGA+GGG | + | chr8_1:77387853-77387872 | Msa1215930:CDS | 40.0% | |
| AATTGAGGATCGAGAACCAA+TGG | - | chr8_1:77387888-77387907 | None:intergenic | 40.0% | |
| TGATCACCATCAACGAATTG+AGG | - | chr8_1:77387903-77387922 | None:intergenic | 40.0% | |
| TCTTCTTGAGAACTGTTAGG+AGG | + | chr8_1:77387950-77387969 | Msa1215930:CDS | 40.0% | |
| CTTCTTGAGAACTGTTAGGA+GGG | + | chr8_1:77387951-77387970 | Msa1215930:CDS | 40.0% | |
| CTTATCAAGCTCCTCATAAC+TGG | - | chr8_1:77387983-77388002 | None:intergenic | 40.0% | |
| CAGTTATGAGGAGCTTGATA+AGG | + | chr8_1:77387981-77388000 | Msa1215930:CDS | 40.0% | |
| CAGATGAATGAGGAGTTATC+TGG | + | chr8_1:77388015-77388034 | Msa1215930:CDS | 40.0% | |
| TGAATGAGGAGTTATCTGGT+TGG | + | chr8_1:77388019-77388038 | Msa1215930:CDS | 40.0% | |
| AAGAAGGATTTGATGGAGCA+CGG | - | chr8_1:77388068-77388087 | None:intergenic | 40.0% | |
| ! | GTGATGGAGTTCAGATTCTT+GGG | + | chr8_1:77388106-77388125 | Msa1215930:CDS | 40.0% |
| TACCTGTGATAAGTGTTCCA+CGG | - | chr8_1:77388185-77388204 | None:intergenic | 40.0% | |
| ATGATACTTGGTATTGCTGC+TGG | + | chr8_1:77388219-77388238 | Msa1215930:CDS | 40.0% | |
| GTTATGTTTCAGTTCGACTG+TGG | + | chr8_1:77388241-77388260 | Msa1215930:CDS | 40.0% | |
| CAAGATTGTGAGGATGAAGA+AGG | - | chr8_1:77388343-77388362 | None:intergenic | 40.0% | |
| ! | TACTTTGGCTTCCCCATAAT+AGG | - | chr8_1:77388371-77388390 | None:intergenic | 40.0% |
| !! | TGGTTCTAACAGGATACTCA+AGG | - | chr8_1:77388500-77388519 | None:intergenic | 40.0% |
| !! | GGAATTTGGTTGGTTCTAAC+AGG | - | chr8_1:77388510-77388529 | None:intergenic | 40.0% |
| CTCAATGAAAAGGGTTCCAA+AGG | - | chr8_1:77388595-77388614 | None:intergenic | 40.0% | |
| TATCATGTCCAGCATTTGGA+TGG | + | chr8_1:77388623-77388642 | Msa1215930:CDS | 40.0% | |
| ATCATGTCCAGCATTTGGAT+GGG | + | chr8_1:77388624-77388643 | Msa1215930:CDS | 40.0% | |
| ! | GGCCGTGTTTACTATGTTTT+CGG | + | chr8_1:77388645-77388664 | Msa1215930:CDS | 40.0% |
| ! | GCCGTGTTTACTATGTTTTC+GGG | + | chr8_1:77388646-77388665 | Msa1215930:CDS | 40.0% |
| TGGAAATCATTCTTTGCCTC+TGG | + | chr8_1:77388768-77388787 | Msa1215930:CDS | 40.0% | |
| AAGTACAGAGTTGCAGAAAC+AGG | - | chr8_1:77388864-77388883 | None:intergenic | 40.0% | |
| ! | TGTTTCTGCAACTCTGTACT+TGG | + | chr8_1:77388863-77388882 | Msa1215930:CDS | 40.0% |
| GTTTCTGCAACTCTGTACTT+GGG | + | chr8_1:77388864-77388883 | Msa1215930:CDS | 40.0% | |
| !! | CATGGTTCTAGCAATCATGT+TGG | + | chr8_1:77388899-77388918 | Msa1215930:CDS | 40.0% |
| ! | TTGGTGTTTCAATCAGGGTA+TGG | + | chr8_1:77387070-77387089 | Msa1215930:CDS | 40.0% |
| TAATTGTGTGGGTAACTACC+CGG | - | chr8_1:77387106-77387125 | None:intergenic | 40.0% | |
| ! | CCTTTTTGTAAACCTCAAGG+GGG | + | chr8_1:77387208-77387227 | Msa1215930:CDS | 40.0% |
| ! | AAGGATAGTGCTGAGAATCT+AGG | + | chr8_1:77387235-77387254 | Msa1215930:CDS | 40.0% |
| AATCTAGGTGAGCTTCTCAT+GGG | + | chr8_1:77387250-77387269 | Msa1215930:CDS | 40.0% | |
| !!! | GAGTACTTTTTGAGATGGAC+TGG | + | chr8_1:77387457-77387476 | Msa1215930:CDS | 40.0% |
| CCCTGTTGGTATTAAGATTC+AGG | + | chr8_1:77387483-77387502 | Msa1215930:CDS | 40.0% | |
| TCTCAGATCCTTCCTTAACA+GGG | - | chr8_1:77387618-77387637 | None:intergenic | 40.0% | |
| TTCTCAGATCCTTCCTTAAC+AGG | - | chr8_1:77387619-77387638 | None:intergenic | 40.0% | |
| ! | TAAATGTGATCCATCGACTG+TGG | + | chr8_1:77387744-77387763 | Msa1215930:CDS | 40.0% |
| GTGGCAATGCCTATTAAAGA+AGG | + | chr8_1:77387763-77387782 | Msa1215930:CDS | 40.0% | |
| TTGAGGAGAGTGATATCAAG+TGG | + | chr8_1:77387818-77387837 | Msa1215930:CDS | 40.0% | |
| ATATCAAGTGGCCATCTAGA+TGG | + | chr8_1:77387830-77387849 | Msa1215930:CDS | 40.0% | |
| TATCAAGTGGCCATCTAGAT+GGG | + | chr8_1:77387831-77387850 | Msa1215930:CDS | 40.0% | |
| AAGTAAGCATCCCATCTAGA+TGG | - | chr8_1:77387844-77387863 | None:intergenic | 40.0% | |
| ATGGGATGCTTACTTGAAGA+TGG | + | chr8_1:77387849-77387868 | Msa1215930:CDS | 40.0% | |
| GATGCTTACTTGAAGATGGA+GGG | + | chr8_1:77387853-77387872 | Msa1215930:CDS | 40.0% | |
| AATTGAGGATCGAGAACCAA+TGG | - | chr8_1:77387888-77387907 | None:intergenic | 40.0% | |
| TGATCACCATCAACGAATTG+AGG | - | chr8_1:77387903-77387922 | None:intergenic | 40.0% | |
| TCTTCTTGAGAACTGTTAGG+AGG | + | chr8_1:77387950-77387969 | Msa1215930:CDS | 40.0% | |
| CTTCTTGAGAACTGTTAGGA+GGG | + | chr8_1:77387951-77387970 | Msa1215930:CDS | 40.0% | |
| CTTATCAAGCTCCTCATAAC+TGG | - | chr8_1:77387983-77388002 | None:intergenic | 40.0% | |
| CAGTTATGAGGAGCTTGATA+AGG | + | chr8_1:77387981-77388000 | Msa1215930:CDS | 40.0% | |
| CAGATGAATGAGGAGTTATC+TGG | + | chr8_1:77388015-77388034 | Msa1215930:CDS | 40.0% | |
| TGAATGAGGAGTTATCTGGT+TGG | + | chr8_1:77388019-77388038 | Msa1215930:CDS | 40.0% | |
| AAGAAGGATTTGATGGAGCA+CGG | - | chr8_1:77388068-77388087 | None:intergenic | 40.0% | |
| ! | GTGATGGAGTTCAGATTCTT+GGG | + | chr8_1:77388106-77388125 | Msa1215930:CDS | 40.0% |
| TACCTGTGATAAGTGTTCCA+CGG | - | chr8_1:77388185-77388204 | None:intergenic | 40.0% | |
| ATGATACTTGGTATTGCTGC+TGG | + | chr8_1:77388219-77388238 | Msa1215930:CDS | 40.0% | |
| GTTATGTTTCAGTTCGACTG+TGG | + | chr8_1:77388241-77388260 | Msa1215930:CDS | 40.0% | |
| CAAGATTGTGAGGATGAAGA+AGG | - | chr8_1:77388343-77388362 | None:intergenic | 40.0% | |
| ! | TACTTTGGCTTCCCCATAAT+AGG | - | chr8_1:77388371-77388390 | None:intergenic | 40.0% |
| !! | TGGTTCTAACAGGATACTCA+AGG | - | chr8_1:77388500-77388519 | None:intergenic | 40.0% |
| !! | GGAATTTGGTTGGTTCTAAC+AGG | - | chr8_1:77388510-77388529 | None:intergenic | 40.0% |
| CTCAATGAAAAGGGTTCCAA+AGG | - | chr8_1:77388595-77388614 | None:intergenic | 40.0% | |
| TATCATGTCCAGCATTTGGA+TGG | + | chr8_1:77388623-77388642 | Msa1215930:CDS | 40.0% | |
| ATCATGTCCAGCATTTGGAT+GGG | + | chr8_1:77388624-77388643 | Msa1215930:CDS | 40.0% | |
| ! | GGCCGTGTTTACTATGTTTT+CGG | + | chr8_1:77388645-77388664 | Msa1215930:CDS | 40.0% |
| ! | GCCGTGTTTACTATGTTTTC+GGG | + | chr8_1:77388646-77388665 | Msa1215930:CDS | 40.0% |
| TGGAAATCATTCTTTGCCTC+TGG | + | chr8_1:77388768-77388787 | Msa1215930:CDS | 40.0% | |
| AAGTACAGAGTTGCAGAAAC+AGG | - | chr8_1:77388864-77388883 | None:intergenic | 40.0% | |
| ! | TGTTTCTGCAACTCTGTACT+TGG | + | chr8_1:77388863-77388882 | Msa1215930:CDS | 40.0% |
| GTTTCTGCAACTCTGTACTT+GGG | + | chr8_1:77388864-77388883 | Msa1215930:CDS | 40.0% | |
| !! | CATGGTTCTAGCAATCATGT+TGG | + | chr8_1:77388899-77388918 | Msa1215930:CDS | 40.0% |
| CTGGGTCATGGCTATTTGTT+TGG | + | chr8_1:77387051-77387070 | Msa1215930:CDS | 45.0% | |
| AGGGTATGGTTTCTACCTTC+CGG | + | chr8_1:77387084-77387103 | Msa1215930:CDS | 45.0% | |
| ! | TGGTGATGAATTGTCGGTGA+AGG | + | chr8_1:77387132-77387151 | Msa1215930:CDS | 45.0% |
| CCCCCTTGAGGTTTACAAAA+AGG | - | chr8_1:77387211-77387230 | None:intergenic | 45.0% | |
| !! | TAAACCTCAAGGGGGTGTTA+AGG | + | chr8_1:77387216-77387235 | Msa1215930:CDS | 45.0% |
| GAATCTAGGTGAGCTTCTCA+TGG | + | chr8_1:77387249-77387268 | Msa1215930:CDS | 45.0% | |
| ATCTAGGTGAGCTTCTCATG+GGG | + | chr8_1:77387251-77387270 | Msa1215930:CDS | 45.0% | |
| GGATCGAGAATTCGCCTTAT+AGG | + | chr8_1:77387278-77387297 | Msa1215930:CDS | 45.0% | |
| ACCAATGTGGCTCGTGTTAT+GGG | + | chr8_1:77387565-77387584 | Msa1215930:CDS | 45.0% | |
| TGAGATGATTCCCCCTGTTA+AGG | + | chr8_1:77387603-77387622 | Msa1215930:CDS | 45.0% | |
| ATGATTCCCCCTGTTAAGGA+AGG | + | chr8_1:77387607-77387626 | Msa1215930:CDS | 45.0% | |
| TCAGATCCTTCCTTAACAGG+GGG | - | chr8_1:77387616-77387635 | None:intergenic | 45.0% | |
| CTCAGATCCTTCCTTAACAG+GGG | - | chr8_1:77387617-77387636 | None:intergenic | 45.0% | |
| TAAGGAAGGATCTGAGAAGC+CGG | + | chr8_1:77387621-77387640 | Msa1215930:CDS | 45.0% | |
| GTACATGGTTGTTGGGTTTG+AGG | + | chr8_1:77387645-77387664 | Msa1215930:CDS | 45.0% | |
| TACCTACGAGGTAACGTTTG+AGG | + | chr8_1:77387801-77387820 | Msa1215930:CDS | 45.0% | |
| GGATGCTTACTTGAAGATGG+AGG | + | chr8_1:77387852-77387871 | Msa1215930:CDS | 45.0% | |
| ! | GATCGAGAACCAATGGACTT+TGG | - | chr8_1:77387881-77387900 | None:intergenic | 45.0% |
| CTCGATCCTCAATTCGTTGA+TGG | + | chr8_1:77387894-77387913 | Msa1215930:CDS | 45.0% | |
| ATGGTGATCACTTTCCTTGC+TGG | + | chr8_1:77387913-77387932 | Msa1215930:CDS | 45.0% | |
| AGCTCAAGCACAGATGAATG+AGG | + | chr8_1:77388005-77388024 | Msa1215930:CDS | 45.0% | |
| GTTATCTGGTTGGAAGCTTG+TGG | + | chr8_1:77388029-77388048 | Msa1215930:CDS | 45.0% | |
| !! | GGTGATGGAGTTCAGATTCT+TGG | + | chr8_1:77388105-77388124 | Msa1215930:CDS | 45.0% |
| TGGAGTTCAGATTCTTGGGA+TGG | + | chr8_1:77388110-77388129 | Msa1215930:CDS | 45.0% | |
| TGCACTTGGATTCATGTCAC+CGG | + | chr8_1:77388155-77388174 | Msa1215930:CDS | 45.0% | |
| ACCTGTGATAAGTGTTCCAC+GGG | - | chr8_1:77388184-77388203 | None:intergenic | 45.0% | |
| ! | AAAGCTGCTTGTTTCTTCCC+CGG | + | chr8_1:77388312-77388331 | Msa1215930:CDS | 45.0% |
| AGGATGAAGAAGGCAATACC+GGG | - | chr8_1:77388333-77388352 | None:intergenic | 45.0% | |
| GAGGATGAAGAAGGCAATAC+CGG | - | chr8_1:77388334-77388353 | None:intergenic | 45.0% | |
| TTATGGGGAAGCCAAAGTAC+AGG | + | chr8_1:77388372-77388391 | Msa1215930:CDS | 45.0% | |
| ATGGAATGGCTCCTGTACTT+TGG | - | chr8_1:77388386-77388405 | None:intergenic | 45.0% | |
| TCTGTCCCACTTACACTTGT+TGG | + | chr8_1:77388447-77388466 | Msa1215930:CDS | 45.0% | |
| AGCCACCAACAAGTGTAAGT+GGG | - | chr8_1:77388455-77388474 | None:intergenic | 45.0% | |
| TAGCCACCAACAAGTGTAAG+TGG | - | chr8_1:77388456-77388475 | None:intergenic | 45.0% | |
| !! | ACACTTGTTGGTGGCTACTT+TGG | + | chr8_1:77388459-77388478 | Msa1215930:CDS | 45.0% |
| CTAACAGGATACTCAAGGTG+AGG | - | chr8_1:77388495-77388514 | None:intergenic | 45.0% | |
| CTAGAGAAATTCCTCAGCAG+CGG | + | chr8_1:77388529-77388548 | Msa1215930:CDS | 45.0% | |
| CCTAGAACTAAAAGCCACGA+CGG | - | chr8_1:77388558-77388577 | None:intergenic | 45.0% | |
| !!! | TGGCTTTTAGTTCTAGGTGC+TGG | + | chr8_1:77388561-77388580 | Msa1215930:CDS | 45.0% |
| GAAAAGGGTTCCAAAGGGAA+GGG | - | chr8_1:77388589-77388608 | None:intergenic | 45.0% | |
| TGAAAAGGGTTCCAAAGGGA+AGG | - | chr8_1:77388590-77388609 | None:intergenic | 45.0% | |
| AACTTACATGCACCTCTGTG+TGG | + | chr8_1:77388728-77388747 | Msa1215930:CDS | 45.0% | |
| CTTGGGATACTCACTCTTCA+TGG | + | chr8_1:77388881-77388900 | Msa1215930:CDS | 45.0% | |
| !! | CTAGCAATCATGTTGGTGAC+AGG | + | chr8_1:77388906-77388925 | Msa1215930:CDS | 45.0% |
| TTGGGTTCCTCTCTTCATTC+TGG | + | chr8_1:77388934-77388953 | Msa1215930:CDS | 45.0% | |
| ACACGAACCAGAATGAAGAG+AGG | - | chr8_1:77388944-77388963 | None:intergenic | 45.0% | |
| CTGGGTCATGGCTATTTGTT+TGG | + | chr8_1:77387051-77387070 | Msa1215930:CDS | 45.0% | |
| AGGGTATGGTTTCTACCTTC+CGG | + | chr8_1:77387084-77387103 | Msa1215930:CDS | 45.0% | |
| ! | TGGTGATGAATTGTCGGTGA+AGG | + | chr8_1:77387132-77387151 | Msa1215930:CDS | 45.0% |
| CCCCCTTGAGGTTTACAAAA+AGG | - | chr8_1:77387211-77387230 | None:intergenic | 45.0% | |
| !! | TAAACCTCAAGGGGGTGTTA+AGG | + | chr8_1:77387216-77387235 | Msa1215930:CDS | 45.0% |
| GAATCTAGGTGAGCTTCTCA+TGG | + | chr8_1:77387249-77387268 | Msa1215930:CDS | 45.0% | |
| ATCTAGGTGAGCTTCTCATG+GGG | + | chr8_1:77387251-77387270 | Msa1215930:CDS | 45.0% | |
| GGATCGAGAATTCGCCTTAT+AGG | + | chr8_1:77387278-77387297 | Msa1215930:CDS | 45.0% | |
| ACCAATGTGGCTCGTGTTAT+GGG | + | chr8_1:77387565-77387584 | Msa1215930:CDS | 45.0% | |
| TGAGATGATTCCCCCTGTTA+AGG | + | chr8_1:77387603-77387622 | Msa1215930:CDS | 45.0% | |
| ATGATTCCCCCTGTTAAGGA+AGG | + | chr8_1:77387607-77387626 | Msa1215930:CDS | 45.0% | |
| TCAGATCCTTCCTTAACAGG+GGG | - | chr8_1:77387616-77387635 | None:intergenic | 45.0% | |
| CTCAGATCCTTCCTTAACAG+GGG | - | chr8_1:77387617-77387636 | None:intergenic | 45.0% | |
| TAAGGAAGGATCTGAGAAGC+CGG | + | chr8_1:77387621-77387640 | Msa1215930:CDS | 45.0% | |
| GTACATGGTTGTTGGGTTTG+AGG | + | chr8_1:77387645-77387664 | Msa1215930:CDS | 45.0% | |
| TACCTACGAGGTAACGTTTG+AGG | + | chr8_1:77387801-77387820 | Msa1215930:CDS | 45.0% | |
| GGATGCTTACTTGAAGATGG+AGG | + | chr8_1:77387852-77387871 | Msa1215930:CDS | 45.0% | |
| ! | GATCGAGAACCAATGGACTT+TGG | - | chr8_1:77387881-77387900 | None:intergenic | 45.0% |
| CTCGATCCTCAATTCGTTGA+TGG | + | chr8_1:77387894-77387913 | Msa1215930:CDS | 45.0% | |
| ATGGTGATCACTTTCCTTGC+TGG | + | chr8_1:77387913-77387932 | Msa1215930:CDS | 45.0% | |
| AGCTCAAGCACAGATGAATG+AGG | + | chr8_1:77388005-77388024 | Msa1215930:CDS | 45.0% | |
| GTTATCTGGTTGGAAGCTTG+TGG | + | chr8_1:77388029-77388048 | Msa1215930:CDS | 45.0% | |
| !! | GGTGATGGAGTTCAGATTCT+TGG | + | chr8_1:77388105-77388124 | Msa1215930:CDS | 45.0% |
| TGGAGTTCAGATTCTTGGGA+TGG | + | chr8_1:77388110-77388129 | Msa1215930:CDS | 45.0% | |
| TGCACTTGGATTCATGTCAC+CGG | + | chr8_1:77388155-77388174 | Msa1215930:CDS | 45.0% | |
| ACCTGTGATAAGTGTTCCAC+GGG | - | chr8_1:77388184-77388203 | None:intergenic | 45.0% | |
| ! | AAAGCTGCTTGTTTCTTCCC+CGG | + | chr8_1:77388312-77388331 | Msa1215930:CDS | 45.0% |
| AGGATGAAGAAGGCAATACC+GGG | - | chr8_1:77388333-77388352 | None:intergenic | 45.0% | |
| GAGGATGAAGAAGGCAATAC+CGG | - | chr8_1:77388334-77388353 | None:intergenic | 45.0% | |
| TTATGGGGAAGCCAAAGTAC+AGG | + | chr8_1:77388372-77388391 | Msa1215930:CDS | 45.0% | |
| ATGGAATGGCTCCTGTACTT+TGG | - | chr8_1:77388386-77388405 | None:intergenic | 45.0% | |
| TCTGTCCCACTTACACTTGT+TGG | + | chr8_1:77388447-77388466 | Msa1215930:CDS | 45.0% | |
| AGCCACCAACAAGTGTAAGT+GGG | - | chr8_1:77388455-77388474 | None:intergenic | 45.0% | |
| TAGCCACCAACAAGTGTAAG+TGG | - | chr8_1:77388456-77388475 | None:intergenic | 45.0% | |
| !! | ACACTTGTTGGTGGCTACTT+TGG | + | chr8_1:77388459-77388478 | Msa1215930:CDS | 45.0% |
| CTAACAGGATACTCAAGGTG+AGG | - | chr8_1:77388495-77388514 | None:intergenic | 45.0% | |
| CTAGAGAAATTCCTCAGCAG+CGG | + | chr8_1:77388529-77388548 | Msa1215930:CDS | 45.0% | |
| CCTAGAACTAAAAGCCACGA+CGG | - | chr8_1:77388558-77388577 | None:intergenic | 45.0% | |
| !!! | TGGCTTTTAGTTCTAGGTGC+TGG | + | chr8_1:77388561-77388580 | Msa1215930:CDS | 45.0% |
| GAAAAGGGTTCCAAAGGGAA+GGG | - | chr8_1:77388589-77388608 | None:intergenic | 45.0% | |
| TGAAAAGGGTTCCAAAGGGA+AGG | - | chr8_1:77388590-77388609 | None:intergenic | 45.0% | |
| AACTTACATGCACCTCTGTG+TGG | + | chr8_1:77388728-77388747 | Msa1215930:CDS | 45.0% | |
| CTTGGGATACTCACTCTTCA+TGG | + | chr8_1:77388881-77388900 | Msa1215930:CDS | 45.0% | |
| !! | CTAGCAATCATGTTGGTGAC+AGG | + | chr8_1:77388906-77388925 | Msa1215930:CDS | 45.0% |
| TTGGGTTCCTCTCTTCATTC+TGG | + | chr8_1:77388934-77388953 | Msa1215930:CDS | 45.0% | |
| ACACGAACCAGAATGAAGAG+AGG | - | chr8_1:77388944-77388963 | None:intergenic | 45.0% | |
| GGGTATGGTTTCTACCTTCC+GGG | + | chr8_1:77387085-77387104 | Msa1215930:CDS | 50.0% | |
| CTATCCTTAACACCCCCTTG+AGG | - | chr8_1:77387223-77387242 | None:intergenic | 50.0% | |
| TCTAGGTGAGCTTCTCATGG+GGG | + | chr8_1:77387252-77387271 | Msa1215930:CDS | 50.0% | |
| GACCAATGTGGCTCGTGTTA+TGG | + | chr8_1:77387564-77387583 | Msa1215930:CDS | 50.0% | |
| TCCCATAACACGAGCCACAT+TGG | - | chr8_1:77387569-77387588 | None:intergenic | 50.0% | |
| TGTTATGGGAACCGGTGATG+CGG | + | chr8_1:77387579-77387598 | Msa1215930:CDS | 50.0% | |
| AATCATCTCAGCCGCATCAC+CGG | - | chr8_1:77387593-77387612 | None:intergenic | 50.0% | |
| AAGGAAGGATCTGAGAAGCC+GGG | + | chr8_1:77387622-77387641 | Msa1215930:CDS | 50.0% | |
| AACCCAACAACCATGTACCC+CGG | - | chr8_1:77387643-77387662 | None:intergenic | 50.0% | |
| ! | ATAGGCATTGCCACAGTCGA+TGG | - | chr8_1:77387757-77387776 | None:intergenic | 50.0% |
| !! | AGCGGCTGGCCTTCTTTAAT+AGG | - | chr8_1:77387775-77387794 | None:intergenic | 50.0% |
| ACCTCGTAGGTAAACGCAAG+CGG | - | chr8_1:77387793-77387812 | None:intergenic | 50.0% | |
| CTCCTCAAACGTTACCTCGT+AGG | - | chr8_1:77387806-77387825 | None:intergenic | 50.0% | |
| GAGAACTGTTAGGAGGGATC+TGG | + | chr8_1:77387957-77387976 | Msa1215930:CDS | 50.0% | |
| ATCTGGTTGGAAGCTTGTGG+TGG | + | chr8_1:77388032-77388051 | Msa1215930:CDS | 50.0% | |
| TCTGGTTGGAAGCTTGTGGT+GGG | + | chr8_1:77388033-77388052 | Msa1215930:CDS | 50.0% | |
| TGTGATAAGTGTTCCACGGG+AGG | - | chr8_1:77388181-77388200 | None:intergenic | 50.0% | |
| TCCCGTGGAACACTTATCAC+AGG | + | chr8_1:77388180-77388199 | Msa1215930:CDS | 50.0% | |
| AGGGTTGGGTTTCAGTTGCA+TGG | + | chr8_1:77388289-77388308 | Msa1215930:CDS | 50.0% | |
| GGATGAAGAAGGCAATACCG+GGG | - | chr8_1:77388332-77388351 | None:intergenic | 50.0% | |
| ! | GTCCCACTTACACTTGTTGG+TGG | + | chr8_1:77388450-77388469 | Msa1215930:CDS | 50.0% |
| !! | TGGTGGCTACTTTGGAGCAA+AGG | + | chr8_1:77388467-77388486 | Msa1215930:CDS | 50.0% |
| CGCTGCTGAGGAATTTCTCT+AGG | - | chr8_1:77388531-77388550 | None:intergenic | 50.0% | |
| !!! | CCGTCGTGGCTTTTAGTTCT+AGG | + | chr8_1:77388555-77388574 | Msa1215930:CDS | 50.0% |
| ! | TCTTGTGGTGGTTTGTGCTG+AGG | + | chr8_1:77388692-77388711 | Msa1215930:CDS | 50.0% |
| TTACATGCACCTCTGTGTGG+AGG | + | chr8_1:77388731-77388750 | Msa1215930:CDS | 50.0% | |
| ATCTCCAATCCTCCACACAG+AGG | - | chr8_1:77388743-77388762 | None:intergenic | 50.0% | |
| TCTGTGTGGAGGATTGGAGA+TGG | + | chr8_1:77388742-77388761 | Msa1215930:CDS | 50.0% | |
| GTACAGTGCAACAGAACCAG+AGG | - | chr8_1:77388787-77388806 | None:intergenic | 50.0% | |
| !! | ATGTTGGTGACAGGCACAGT+TGG | + | chr8_1:77388915-77388934 | Msa1215930:CDS | 50.0% |
| !! | TGTTGGTGACAGGCACAGTT+GGG | + | chr8_1:77388916-77388935 | Msa1215930:CDS | 50.0% |
| GGGTATGGTTTCTACCTTCC+GGG | + | chr8_1:77387085-77387104 | Msa1215930:CDS | 50.0% | |
| CTATCCTTAACACCCCCTTG+AGG | - | chr8_1:77387223-77387242 | None:intergenic | 50.0% | |
| TCTAGGTGAGCTTCTCATGG+GGG | + | chr8_1:77387252-77387271 | Msa1215930:CDS | 50.0% | |
| GACCAATGTGGCTCGTGTTA+TGG | + | chr8_1:77387564-77387583 | Msa1215930:CDS | 50.0% | |
| TCCCATAACACGAGCCACAT+TGG | - | chr8_1:77387569-77387588 | None:intergenic | 50.0% | |
| TGTTATGGGAACCGGTGATG+CGG | + | chr8_1:77387579-77387598 | Msa1215930:CDS | 50.0% | |
| AATCATCTCAGCCGCATCAC+CGG | - | chr8_1:77387593-77387612 | None:intergenic | 50.0% | |
| AAGGAAGGATCTGAGAAGCC+GGG | + | chr8_1:77387622-77387641 | Msa1215930:CDS | 50.0% | |
| AACCCAACAACCATGTACCC+CGG | - | chr8_1:77387643-77387662 | None:intergenic | 50.0% | |
| ! | ATAGGCATTGCCACAGTCGA+TGG | - | chr8_1:77387757-77387776 | None:intergenic | 50.0% |
| !! | AGCGGCTGGCCTTCTTTAAT+AGG | - | chr8_1:77387775-77387794 | None:intergenic | 50.0% |
| ACCTCGTAGGTAAACGCAAG+CGG | - | chr8_1:77387793-77387812 | None:intergenic | 50.0% | |
| CTCCTCAAACGTTACCTCGT+AGG | - | chr8_1:77387806-77387825 | None:intergenic | 50.0% | |
| GAGAACTGTTAGGAGGGATC+TGG | + | chr8_1:77387957-77387976 | Msa1215930:CDS | 50.0% | |
| ATCTGGTTGGAAGCTTGTGG+TGG | + | chr8_1:77388032-77388051 | Msa1215930:CDS | 50.0% | |
| TCTGGTTGGAAGCTTGTGGT+GGG | + | chr8_1:77388033-77388052 | Msa1215930:CDS | 50.0% | |
| TGTGATAAGTGTTCCACGGG+AGG | - | chr8_1:77388181-77388200 | None:intergenic | 50.0% | |
| TCCCGTGGAACACTTATCAC+AGG | + | chr8_1:77388180-77388199 | Msa1215930:CDS | 50.0% | |
| AGGGTTGGGTTTCAGTTGCA+TGG | + | chr8_1:77388289-77388308 | Msa1215930:CDS | 50.0% | |
| GGATGAAGAAGGCAATACCG+GGG | - | chr8_1:77388332-77388351 | None:intergenic | 50.0% | |
| ! | GTCCCACTTACACTTGTTGG+TGG | + | chr8_1:77388450-77388469 | Msa1215930:CDS | 50.0% |
| !! | TGGTGGCTACTTTGGAGCAA+AGG | + | chr8_1:77388467-77388486 | Msa1215930:CDS | 50.0% |
| CGCTGCTGAGGAATTTCTCT+AGG | - | chr8_1:77388531-77388550 | None:intergenic | 50.0% | |
| !!! | CCGTCGTGGCTTTTAGTTCT+AGG | + | chr8_1:77388555-77388574 | Msa1215930:CDS | 50.0% |
| ! | TCTTGTGGTGGTTTGTGCTG+AGG | + | chr8_1:77388692-77388711 | Msa1215930:CDS | 50.0% |
| TTACATGCACCTCTGTGTGG+AGG | + | chr8_1:77388731-77388750 | Msa1215930:CDS | 50.0% | |
| ATCTCCAATCCTCCACACAG+AGG | - | chr8_1:77388743-77388762 | None:intergenic | 50.0% | |
| TCTGTGTGGAGGATTGGAGA+TGG | + | chr8_1:77388742-77388761 | Msa1215930:CDS | 50.0% | |
| GTACAGTGCAACAGAACCAG+AGG | - | chr8_1:77388787-77388806 | None:intergenic | 50.0% | |
| !! | ATGTTGGTGACAGGCACAGT+TGG | + | chr8_1:77388915-77388934 | Msa1215930:CDS | 50.0% |
| !! | TGTTGGTGACAGGCACAGTT+GGG | + | chr8_1:77388916-77388935 | Msa1215930:CDS | 50.0% |
| TGTGTGGGTAACTACCCGGA+AGG | - | chr8_1:77387102-77387121 | None:intergenic | 55.0% | |
| GTGAGCTTCTCATGGGGGAT+CGG | + | chr8_1:77387257-77387276 | Msa1215930:CDS | 55.0% | |
| !! | AGATGGACTGGGTACCCTGT+TGG | + | chr8_1:77387469-77387488 | Msa1215930:CDS | 55.0% |
| GTGGCTCGTGTTATGGGAAC+CGG | + | chr8_1:77387571-77387590 | Msa1215930:CDS | 55.0% | |
| AGGAAGGATCTGAGAAGCCG+GGG | + | chr8_1:77387623-77387642 | Msa1215930:CDS | 55.0% | |
| ATCTGAGAAGCCGGGGTACA+TGG | + | chr8_1:77387630-77387649 | Msa1215930:CDS | 55.0% | |
| AAGCCGGGGTACATGGTTGT+TGG | + | chr8_1:77387637-77387656 | Msa1215930:CDS | 55.0% | |
| AGCCGGGGTACATGGTTGTT+GGG | + | chr8_1:77387638-77387657 | Msa1215930:CDS | 55.0% | |
| TGGAGGGAGCCAAAGTCCAT+TGG | + | chr8_1:77387869-77387888 | Msa1215930:CDS | 55.0% | |
| GAGGGATCTGGCCAGTTATG+AGG | + | chr8_1:77387969-77387988 | Msa1215930:CDS | 55.0% | |
| CTGGTTGGAAGCTTGTGGTG+GGG | + | chr8_1:77388034-77388053 | Msa1215930:CDS | 55.0% | |
| TGGTTGGAAGCTTGTGGTGG+GGG | + | chr8_1:77388035-77388054 | Msa1215930:CDS | 55.0% | |
| ATAAGTGTTCCACGGGAGGC+CGG | - | chr8_1:77388177-77388196 | None:intergenic | 55.0% | |
| AACACGGCCCATCCAAATGC+TGG | - | chr8_1:77388634-77388653 | None:intergenic | 55.0% | |
| TGCACCTCTGTGTGGAGGAT+TGG | + | chr8_1:77388736-77388755 | Msa1215930:CDS | 55.0% | |
| GTGTGGAGGATTGGAGATGG+TGG | + | chr8_1:77388745-77388764 | Msa1215930:CDS | 55.0% | |
| ! | TGGAGGATTGGAGATGGTGG+TGG | + | chr8_1:77388748-77388767 | Msa1215930:CDS | 55.0% |
| TGTGTGGGTAACTACCCGGA+AGG | - | chr8_1:77387102-77387121 | None:intergenic | 55.0% | |
| GTGAGCTTCTCATGGGGGAT+CGG | + | chr8_1:77387257-77387276 | Msa1215930:CDS | 55.0% | |
| !! | AGATGGACTGGGTACCCTGT+TGG | + | chr8_1:77387469-77387488 | Msa1215930:CDS | 55.0% |
| GTGGCTCGTGTTATGGGAAC+CGG | + | chr8_1:77387571-77387590 | Msa1215930:CDS | 55.0% | |
| AGGAAGGATCTGAGAAGCCG+GGG | + | chr8_1:77387623-77387642 | Msa1215930:CDS | 55.0% | |
| ATCTGAGAAGCCGGGGTACA+TGG | + | chr8_1:77387630-77387649 | Msa1215930:CDS | 55.0% | |
| AAGCCGGGGTACATGGTTGT+TGG | + | chr8_1:77387637-77387656 | Msa1215930:CDS | 55.0% | |
| AGCCGGGGTACATGGTTGTT+GGG | + | chr8_1:77387638-77387657 | Msa1215930:CDS | 55.0% | |
| TGGAGGGAGCCAAAGTCCAT+TGG | + | chr8_1:77387869-77387888 | Msa1215930:CDS | 55.0% | |
| GAGGGATCTGGCCAGTTATG+AGG | + | chr8_1:77387969-77387988 | Msa1215930:CDS | 55.0% | |
| CTGGTTGGAAGCTTGTGGTG+GGG | + | chr8_1:77388034-77388053 | Msa1215930:CDS | 55.0% | |
| TGGTTGGAAGCTTGTGGTGG+GGG | + | chr8_1:77388035-77388054 | Msa1215930:CDS | 55.0% | |
| ATAAGTGTTCCACGGGAGGC+CGG | - | chr8_1:77388177-77388196 | None:intergenic | 55.0% | |
| AACACGGCCCATCCAAATGC+TGG | - | chr8_1:77388634-77388653 | None:intergenic | 55.0% | |
| TGCACCTCTGTGTGGAGGAT+TGG | + | chr8_1:77388736-77388755 | Msa1215930:CDS | 55.0% | |
| GTGTGGAGGATTGGAGATGG+TGG | + | chr8_1:77388745-77388764 | Msa1215930:CDS | 55.0% | |
| ! | TGGAGGATTGGAGATGGTGG+TGG | + | chr8_1:77388748-77388767 | Msa1215930:CDS | 55.0% |
| CGTAGGTAAACGCAAGCGGC+TGG | - | chr8_1:77387789-77387808 | None:intergenic | 60.0% | |
| GCCGCTTGCGTTTACCTACG+AGG | + | chr8_1:77387789-77387808 | Msa1215930:CDS | 60.0% | |
| CTGTGGAGAACACTCGCGTG+CGG | + | chr8_1:77388258-77388277 | Msa1215930:CDS | 60.0% | |
| GTGCGGCGATCAGAAGGGTT+GGG | + | chr8_1:77388275-77388294 | Msa1215930:CDS | 60.0% | |
| CGTAGGTAAACGCAAGCGGC+TGG | - | chr8_1:77387789-77387808 | None:intergenic | 60.0% | |
| GCCGCTTGCGTTTACCTACG+AGG | + | chr8_1:77387789-77387808 | Msa1215930:CDS | 60.0% | |
| CTGTGGAGAACACTCGCGTG+CGG | + | chr8_1:77388258-77388277 | Msa1215930:CDS | 60.0% | |
| GTGCGGCGATCAGAAGGGTT+GGG | + | chr8_1:77388275-77388294 | Msa1215930:CDS | 60.0% | |
| TTCATGTCACCGGCCTCCCG+TGG | + | chr8_1:77388165-77388184 | Msa1215930:CDS | 65.0% | |
| ACTCGCGTGCGGCGATCAGA+AGG | + | chr8_1:77388269-77388288 | Msa1215930:CDS | 65.0% | |
| CTCGCGTGCGGCGATCAGAA+GGG | + | chr8_1:77388270-77388289 | Msa1215930:CDS | 65.0% | |
| CGTGCGGCGATCAGAAGGGT+TGG | + | chr8_1:77388274-77388293 | Msa1215930:CDS | 65.0% | |
| CACGACGGATACCGCTGCTG+AGG | - | chr8_1:77388543-77388562 | None:intergenic | 65.0% | |
| CTCAGCAGCGGTATCCGTCG+TGG | + | chr8_1:77388541-77388560 | Msa1215930:CDS | 65.0% | |
| !! | GGTGCTGGCACCCTTCCCTT+TGG | + | chr8_1:77388576-77388595 | Msa1215930:CDS | 65.0% |
| TTCATGTCACCGGCCTCCCG+TGG | + | chr8_1:77388165-77388184 | Msa1215930:CDS | 65.0% | |
| ACTCGCGTGCGGCGATCAGA+AGG | + | chr8_1:77388269-77388288 | Msa1215930:CDS | 65.0% | |
| CTCGCGTGCGGCGATCAGAA+GGG | + | chr8_1:77388270-77388289 | Msa1215930:CDS | 65.0% | |
| CGTGCGGCGATCAGAAGGGT+TGG | + | chr8_1:77388274-77388293 | Msa1215930:CDS | 65.0% | |
| CACGACGGATACCGCTGCTG+AGG | - | chr8_1:77388543-77388562 | None:intergenic | 65.0% | |
| CTCAGCAGCGGTATCCGTCG+TGG | + | chr8_1:77388541-77388560 | Msa1215930:CDS | 65.0% | |
| !! | GGTGCTGGCACCCTTCCCTT+TGG | + | chr8_1:77388576-77388595 | Msa1215930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 77387025 | 77388995 | 77387025 | ID=Msa1215930;Name=Msa1215930 |
| chr8_1 | mRNA | 77387025 | 77388995 | 77387025 | ID=Msa1215930-mRNA-1;Parent=Msa1215930;Name=Msa1215930-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|656 |
| chr8_1 | exon | 77387025 | 77388995 | 77387025 | ID=Msa1215930-mRNA-1:exon:26768;Parent=Msa1215930-mRNA-1 |
| chr8_1 | CDS | 77387025 | 77388995 | 77387025 | ID=Msa1215930-mRNA-1:cds;Parent=Msa1215930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
