Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0629030 | AES86702.1 | 97.396 | 192 | 5 | 0 | 1 | 192 | 1 | 192 | 2.64e-133 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0629030 | sp|Q9C523|DIR19_ARATH | 53.476 | 187 | 74 | 4 | 10 | 191 | 7 | 185 | 5.35e-64 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001360 | Msa0629030 | 0.822000 | 2.992754e-53 | -8.615850e-47 |
| Msa0004940 | Msa0629030 | 0.838979 | 2.083575e-57 | -8.615850e-47 |
| Msa0004990 | Msa0629030 | 0.828436 | 8.999682e-55 | -8.615850e-47 |
| Msa0024290 | Msa0629030 | 0.802883 | 4.540526e-49 | -8.615850e-47 |
| Msa0030710 | Msa0629030 | -0.800430 | 1.446446e-48 | -8.615850e-47 |
| Msa0031650 | Msa0629030 | 0.820854 | 5.502839e-53 | -8.615850e-47 |
| Msa0034800 | Msa0629030 | -0.831838 | 1.330453e-55 | -8.615850e-47 |
| Msa0046680 | Msa0629030 | 0.876989 | 8.999584e-69 | -8.615850e-47 |
| Msa0048950 | Msa0629030 | 0.809625 | 1.725305e-50 | -8.615850e-47 |
| Msa0053040 | Msa0629030 | 0.829696 | 4.456186e-55 | -8.615850e-47 |
| Msa0059880 | Msa0629030 | 0.827189 | 1.794910e-54 | -8.615850e-47 |
| Msa0060370 | Msa0629030 | 0.817081 | 3.966582e-52 | -8.615850e-47 |
| Msa0064990 | Msa0629030 | 0.809881 | 1.520000e-50 | -8.615850e-47 |
| Msa0072030 | Msa0629030 | 0.811952 | 5.411660e-51 | -8.615850e-47 |
| Msa0083200 | Msa0629030 | -0.835092 | 2.052090e-56 | -8.615850e-47 |
| Msa0093530 | Msa0629030 | 0.859350 | 4.394468e-63 | -8.615850e-47 |
| Msa0098380 | Msa0629030 | 0.820613 | 6.252318e-53 | -8.615850e-47 |
| Msa0107830 | Msa0629030 | 0.859629 | 3.625095e-63 | -8.615850e-47 |
| Msa0614960 | Msa0629030 | 0.847629 | 1.024571e-59 | -8.615850e-47 |
| Msa0628200 | Msa0629030 | 0.811115 | 8.228504e-51 | -8.615850e-47 |
| Msa0629030 | Msa0629040 | 0.922000 | 1.734025e-88 | -8.615850e-47 |
| Msa0629030 | Msa0640290 | 0.802781 | 4.766349e-49 | -8.615850e-47 |
| Msa0629030 | Msa0651820 | 0.852391 | 4.761215e-61 | -8.615850e-47 |
| Msa0629030 | Msa0652590 | 0.862971 | 3.471071e-64 | -8.615850e-47 |
| Msa0629030 | Msa0652600 | 0.822044 | 2.923208e-53 | -8.615850e-47 |
| Msa0629030 | Msa0652610 | 0.847685 | 9.887249e-60 | -8.615850e-47 |
| Msa0629030 | Msa0655370 | 0.843768 | 1.143409e-58 | -8.615850e-47 |
| Msa0629030 | Msa0657260 | 0.857605 | 1.456160e-62 | -8.615850e-47 |
| Msa0629030 | Msa0659100 | -0.802073 | 6.670740e-49 | -8.615850e-47 |
| Msa0629030 | Msa0666580 | 0.993632 | 4.262305e-201 | -8.615850e-47 |
| Msa0629030 | Msa0672090 | 0.818948 | 1.501444e-52 | -8.615850e-47 |
| Msa0629030 | Msa0678620 | 0.811072 | 8.405006e-51 | -8.615850e-47 |
| Msa0629030 | Msa0694320 | 0.824658 | 7.165588e-54 | -8.615850e-47 |
| Msa0629030 | Msa0699170 | 0.837184 | 6.037031e-57 | -8.615850e-47 |
| Msa0629030 | Msa0701490 | 0.858000 | 1.112412e-62 | -8.615850e-47 |
| Msa0629030 | Msa0701560 | 0.859490 | 3.990821e-63 | -8.615850e-47 |
| Msa0629030 | Msa0707870 | -0.814609 | 1.412275e-51 | -8.615850e-47 |
| Msa0629030 | Msa0709790 | 0.804143 | 2.488425e-49 | -8.615850e-47 |
| Msa0629030 | Msa0711230 | 0.826605 | 2.475269e-54 | -8.615850e-47 |
| Msa0629030 | Msa0716620 | 0.882870 | 7.247386e-71 | -8.615850e-47 |
| Msa0629030 | Msa0721260 | 0.868475 | 6.353153e-66 | -8.615850e-47 |
| Msa0629030 | Msa0727230 | 0.819176 | 1.332780e-52 | -8.615850e-47 |
| Msa0629030 | Msa0727480 | 0.810791 | 9.671361e-51 | -8.615850e-47 |
| Msa0629030 | Msa0728230 | 0.867218 | 1.608769e-65 | -8.615850e-47 |
| Msa0629030 | Msa0728520 | 0.920211 | 1.704860e-87 | -8.615850e-47 |
| Msa0629030 | Msa0728570 | 0.869251 | 3.561824e-66 | -8.615850e-47 |
| Msa0629030 | Msa0735280 | 0.800907 | 1.156438e-48 | -8.615850e-47 |
| Msa0629030 | Msa0738570 | 0.827100 | 1.885159e-54 | -8.615850e-47 |
| Msa0629030 | Msa0742690 | -0.805288 | 1.434972e-49 | -8.615850e-47 |
| Msa0629030 | Msa0743370 | 0.806537 | 7.837991e-50 | -8.615850e-47 |
| Msa0629030 | Msa0744540 | 0.803199 | 3.906044e-49 | -8.615850e-47 |
| Msa0629030 | Msa0744550 | 0.855199 | 7.407244e-62 | -8.615850e-47 |
| Msa0629030 | Msa0744560 | 0.848469 | 6.009773e-60 | -8.615850e-47 |
| Msa0629030 | Msa0744710 | 0.810127 | 1.345132e-50 | -8.615850e-47 |
| Msa0629030 | Msa0747710 | 0.835017 | 2.143131e-56 | -8.615850e-47 |
| Msa0629030 | Msa0749140 | 0.855185 | 7.476113e-62 | -8.615850e-47 |
| Msa0629030 | Msa0750790 | 0.860000 | 2.802147e-63 | -8.615850e-47 |
| Msa0629030 | Msa0750830 | 0.873943 | 9.934728e-68 | -8.615850e-47 |
| Msa0629030 | Msa0753410 | 0.882498 | 9.903446e-71 | -8.615850e-47 |
| Msa0629030 | Msa0772350 | 0.910721 | 1.363839e-82 | -8.615850e-47 |
| Msa0629030 | Msa0776540 | 0.917668 | 4.008380e-86 | -8.615850e-47 |
| Msa0629030 | Msa0777600 | 0.843111 | 1.713183e-58 | -8.615850e-47 |
| Msa0629030 | Msa0779830 | -0.800551 | 1.366680e-48 | -8.615850e-47 |
| Msa0629030 | Msa0783580 | 0.843655 | 1.225791e-58 | -8.615850e-47 |
| Msa0629030 | Msa0792890 | 0.850282 | 1.877712e-60 | -8.615850e-47 |
| Msa0629030 | Msa0793570 | 0.808773 | 2.627264e-50 | -8.615850e-47 |
| Msa0629030 | Msa0794200 | 0.857781 | 1.291925e-62 | -8.615850e-47 |
| Msa0629030 | Msa0794240 | 0.856766 | 2.576880e-62 | -8.615850e-47 |
| Msa0629030 | Msa0795320 | 0.844191 | 8.810510e-59 | -8.615850e-47 |
| Msa0629030 | Msa0795330 | 0.879938 | 8.279757e-70 | -8.615850e-47 |
| Msa0629030 | Msa0799120 | 0.814711 | 1.340859e-51 | -8.615850e-47 |
| Msa0629030 | Msa0814660 | 0.817170 | 3.788132e-52 | -8.615850e-47 |
| Msa0629030 | Msa0819110 | 0.842896 | 1.953932e-58 | -8.615850e-47 |
| Msa0629030 | Msa0826240 | 0.820027 | 8.518033e-53 | -8.615850e-47 |
| Msa0629030 | Msa0826360 | 0.863302 | 2.742841e-64 | -8.615850e-47 |
| Msa0629030 | Msa0826370 | 0.846687 | 1.856693e-59 | -8.615850e-47 |
| Msa0629030 | Msa0827560 | -0.812748 | 3.626405e-51 | -8.615850e-47 |
| Msa0629030 | Msa0828910 | 0.851047 | 1.144264e-60 | -8.615850e-47 |
| Msa0629030 | Msa0831320 | 0.800882 | 1.170159e-48 | -8.615850e-47 |
| Msa0629030 | Msa0831450 | 0.838611 | 2.594921e-57 | -8.615850e-47 |
| Msa0629030 | Msa0832360 | 0.814984 | 1.166255e-51 | -8.615850e-47 |
| Msa0629030 | Msa0837550 | 0.899911 | 1.239570e-77 | -8.615850e-47 |
| Msa0629030 | Msa0855260 | 0.817519 | 3.161559e-52 | -8.615850e-47 |
| Msa0629030 | Msa0859230 | 0.823750 | 1.170917e-53 | -8.615850e-47 |
| Msa0629030 | Msa0862750 | -0.810690 | 1.016749e-50 | -8.615850e-47 |
| Msa0629030 | Msa0865810 | 0.830948 | 2.203232e-55 | -8.615850e-47 |
| Msa0629030 | Msa0865820 | 0.838131 | 3.449418e-57 | -8.615850e-47 |
| Msa0629030 | Msa0865830 | 0.861607 | 9.108167e-64 | -8.615850e-47 |
| Msa0629030 | Msa0874750 | 0.858614 | 7.299251e-63 | -8.615850e-47 |
| Msa0629030 | Msa0883610 | 0.809213 | 2.114725e-50 | -8.615850e-47 |
| Msa0629030 | Msa0883640 | 0.821969 | 3.043601e-53 | -8.615850e-47 |
| Msa0629030 | Msa0886370 | 0.835258 | 1.863326e-56 | -8.615850e-47 |
| Msa0629030 | Msa0896920 | 0.826376 | 2.805920e-54 | -8.615850e-47 |
| Msa0629030 | Msa0902340 | 0.810752 | 9.858473e-51 | -8.615850e-47 |
| Msa0629030 | Msa0910560 | 0.874953 | 4.513572e-68 | -8.615850e-47 |
| Msa0629030 | Msa0910570 | 0.812966 | 3.248919e-51 | -8.615850e-47 |
| Msa0629030 | Msa0910590 | 0.859238 | 4.748719e-63 | -8.615850e-47 |
| Msa0629030 | Msa0910830 | 0.825332 | 4.965577e-54 | -8.615850e-47 |
| Msa0629030 | Msa0913500 | 0.812587 | 3.933809e-51 | -8.615850e-47 |
| Msa0629030 | Msa0913550 | 0.807067 | 6.058696e-50 | -8.615850e-47 |
| Msa0629030 | Msa0933050 | -0.809245 | 2.081908e-50 | -8.615850e-47 |
| Msa0629030 | Msa0945320 | 0.840813 | 6.934280e-58 | -8.615850e-47 |
| Msa0629030 | Msa0945330 | 0.838938 | 2.135287e-57 | -8.615850e-47 |
| Msa0629030 | Msa0948430 | 0.868123 | 8.251646e-66 | -8.615850e-47 |
| Msa0629030 | Msa0948460 | 0.821263 | 4.432078e-53 | -8.615850e-47 |
| Msa0629030 | Msa0951060 | 0.818175 | 2.248096e-52 | -8.615850e-47 |
| Msa0629030 | Msa0960090 | 0.823379 | 1.430065e-53 | -8.615850e-47 |
| Msa0629030 | Msa0970940 | -0.807696 | 4.454742e-50 | -8.615850e-47 |
| Msa0629030 | Msa0976400 | 0.880461 | 5.384231e-70 | -8.615850e-47 |
| Msa0629030 | Msa0985250 | 0.822808 | 1.943137e-53 | -8.615850e-47 |
| Msa0629030 | Msa0985260 | 0.808035 | 3.774422e-50 | -8.615850e-47 |
| Msa0629030 | Msa0985290 | 0.805945 | 1.044912e-49 | -8.615850e-47 |
| Msa0629030 | Msa0985380 | 0.888005 | 8.661466e-73 | -8.615850e-47 |
| Msa0629030 | Msa0985700 | 0.822059 | 2.899850e-53 | -8.615850e-47 |
| Msa0629030 | Msa0987550 | 0.826377 | 2.805179e-54 | -8.615850e-47 |
| Msa0629030 | Msa1021620 | 0.815847 | 7.493383e-52 | -8.615850e-47 |
| Msa0629030 | Msa1023430 | 0.913676 | 4.667846e-84 | -8.615850e-47 |
| Msa0629030 | Msa1024350 | 0.812093 | 5.042786e-51 | -8.615850e-47 |
| Msa0629030 | Msa1030210 | 0.812771 | 3.584066e-51 | -8.615850e-47 |
| Msa0629030 | Msa1035050 | 0.822259 | 2.606380e-53 | -8.615850e-47 |
| Msa0629030 | Msa1040330 | 0.852236 | 5.269292e-61 | -8.615850e-47 |
| Msa0629030 | Msa1061840 | 0.892493 | 1.509384e-74 | -8.615850e-47 |
| Msa0629030 | Msa1069250 | 0.833203 | 6.104321e-56 | -8.615850e-47 |
| Msa0629030 | Msa1071350 | 0.836087 | 1.148906e-56 | -8.615850e-47 |
| Msa0629030 | Msa1075090 | 0.809506 | 1.829613e-50 | -8.615850e-47 |
| Msa0629030 | Msa1083100 | 0.840491 | 8.420463e-58 | -8.615850e-47 |
| Msa0629030 | Msa1084340 | -0.803137 | 4.024075e-49 | -8.615850e-47 |
| Msa0629030 | Msa1085820 | 0.857734 | 1.334110e-62 | -8.615850e-47 |
| Msa0629030 | Msa1099650 | 0.822115 | 2.814713e-53 | -8.615850e-47 |
| Msa0629030 | Msa1107510 | 0.900651 | 5.918132e-78 | -8.615850e-47 |
| Msa0629030 | Msa1109880 | 0.805453 | 1.325285e-49 | -8.615850e-47 |
| Msa0629030 | Msa1109890 | 0.807773 | 4.291600e-50 | -8.615850e-47 |
| Msa0629030 | Msa1110900 | 0.865345 | 6.318349e-65 | -8.615850e-47 |
| Msa0629030 | Msa1118740 | 0.814328 | 1.629657e-51 | -8.615850e-47 |
| Msa0629030 | Msa1127940 | 0.850385 | 1.757545e-60 | -8.615850e-47 |
| Msa0629030 | Msa1129130 | -0.801902 | 7.231597e-49 | -8.615850e-47 |
| Msa0629030 | Msa1129470 | -0.815770 | 7.797506e-52 | -8.615850e-47 |
| Msa0629030 | Msa1131120 | 0.828068 | 1.103825e-54 | -8.615850e-47 |
| Msa0629030 | Msa1136630 | 0.841888 | 3.615756e-58 | -8.615850e-47 |
| Msa0629030 | Msa1136690 | 0.805647 | 1.206746e-49 | -8.615850e-47 |
| Msa0629030 | Msa1140700 | -0.803621 | 3.194985e-49 | -8.615850e-47 |
| Msa0629030 | Msa1142390 | 0.800966 | 1.124404e-48 | -8.615850e-47 |
| Msa0629030 | Msa1151070 | 0.906613 | 1.231028e-80 | -8.615850e-47 |
| Msa0629030 | Msa1154190 | -0.830630 | 2.635654e-55 | -8.615850e-47 |
| Msa0629030 | Msa1157200 | 0.808130 | 3.603171e-50 | -8.615850e-47 |
| Msa0629030 | Msa1165860 | 0.848788 | 4.903654e-60 | -8.615850e-47 |
| Msa0629030 | Msa1174450 | 0.822345 | 2.489135e-53 | -8.615850e-47 |
| Msa0629030 | Msa1177360 | -0.800987 | 1.113695e-48 | -8.615850e-47 |
| Msa0629030 | Msa1192790 | -0.809893 | 1.510438e-50 | -8.615850e-47 |
| Msa0629030 | Msa1202110 | 0.822483 | 2.312662e-53 | -8.615850e-47 |
| Msa0629030 | Msa1208050 | 0.803317 | 3.692243e-49 | -8.615850e-47 |
| Msa0629030 | Msa1208140 | 0.811224 | 7.790212e-51 | -8.615850e-47 |
| Msa0629030 | Msa1208830 | 0.818101 | 2.336116e-52 | -8.615850e-47 |
| Msa0629030 | Msa1208910 | 0.824294 | 8.724121e-54 | -8.615850e-47 |
| Msa0629030 | Msa1211610 | 0.818536 | 1.862608e-52 | -8.615850e-47 |
| Msa0629030 | Msa1221520 | 0.868642 | 5.608417e-66 | -8.615850e-47 |
| Msa0629030 | Msa1223560 | 0.834639 | 2.667569e-56 | -8.615850e-47 |
| Msa0629030 | Msa1235990 | -0.800515 | 1.389898e-48 | -8.615850e-47 |
| Msa0629030 | Msa1239190 | 0.801285 | 9.675494e-49 | -8.615850e-47 |
| Msa0629030 | Msa1254870 | 0.820563 | 6.421835e-53 | -8.615850e-47 |
| Msa0629030 | Msa1262910 | 0.807434 | 5.063616e-50 | -8.615850e-47 |
| Msa0629030 | Msa1263500 | 0.838818 | 2.293498e-57 | -8.615850e-47 |
| Msa0629030 | Msa1264940 | 0.855547 | 5.865029e-62 | -8.615850e-47 |
| Msa0629030 | Msa1292560 | 0.816711 | 4.803918e-52 | -8.615850e-47 |
| Msa0629030 | Msa1296490 | 0.818106 | 2.330426e-52 | -8.615850e-47 |
| Msa0629030 | Msa1299480 | 0.807173 | 5.751944e-50 | -8.615850e-47 |
| Msa0629030 | Msa1303150 | 0.866905 | 2.024888e-65 | -8.615850e-47 |
| Msa0629030 | Msa1314810 | 0.803091 | 4.112978e-49 | -8.615850e-47 |
| Msa0629030 | Msa1320160 | 0.801547 | 8.554322e-49 | -8.615850e-47 |
| Msa0629030 | Msa1323030 | 0.819358 | 1.211258e-52 | -8.615850e-47 |
| Msa0629030 | Msa1323120 | 0.808589 | 2.874970e-50 | -8.615850e-47 |
| Msa0629030 | Msa1327400 | -0.813483 | 2.502162e-51 | -8.615850e-47 |
| Msa0629030 | Msa1327420 | -0.811482 | 6.850160e-51 | -8.615850e-47 |
| Msa0629030 | Msa1328430 | 0.820454 | 6.800595e-53 | -8.615850e-47 |
| Msa0629030 | Msa1334000 | 0.878217 | 3.356906e-69 | -8.615850e-47 |
| Msa0629030 | Msa1344870 | -0.815887 | 7.341342e-52 | -8.615850e-47 |
| Msa0629030 | Msa1349420 | 0.847584 | 1.054490e-59 | -8.615850e-47 |
| Msa0629030 | Msa1359770 | 0.819130 | 1.365293e-52 | -8.615850e-47 |
| Msa0629030 | Msa1364690 | 0.829672 | 4.514615e-55 | -8.615850e-47 |
| Msa0629030 | Msa1375640 | 0.814480 | 1.508001e-51 | -8.615850e-47 |
| Msa0629030 | Msa1376520 | 0.841449 | 4.721497e-58 | -8.615850e-47 |
| Msa0629030 | Msa1378020 | 0.835817 | 1.345256e-56 | -8.615850e-47 |
| Msa0629030 | Msa1382740 | 0.806756 | 7.048293e-50 | -8.615850e-47 |
| Msa0629030 | Msa1383770 | 0.818479 | 1.918978e-52 | -8.615850e-47 |
| Msa0629030 | Msa1387610 | 0.826477 | 2.655198e-54 | -8.615850e-47 |
| Msa0629030 | Msa1394090 | -0.800139 | 1.658226e-48 | -8.615850e-47 |
| Msa0629030 | Msa1398110 | 0.861482 | 9.946673e-64 | -8.615850e-47 |
| Msa0629030 | Msa1398120 | 0.857376 | 1.702457e-62 | -8.615850e-47 |
| Msa0629030 | Msa1408320 | 0.834277 | 3.289882e-56 | -8.615850e-47 |
| Msa0629030 | Msa1419210 | 0.830347 | 3.090778e-55 | -8.615850e-47 |
| Msa0629030 | Msa1429190 | 0.835719 | 1.424568e-56 | -8.615850e-47 |
| Msa0629030 | Msa1437590 | 0.826880 | 2.128290e-54 | -8.615850e-47 |
| Msa0629030 | Msa1442910 | 0.819786 | 9.674120e-53 | -8.615850e-47 |
| Msa0629030 | Msa1449470 | 0.833843 | 4.223988e-56 | -8.615850e-47 |
| Msa0629030 | Msa1453890 | 0.808041 | 3.763740e-50 | -8.615850e-47 |
| Msa0629030 | Msa1459920 | 0.826995 | 1.996921e-54 | -8.615850e-47 |
| Msa0629030 | Msa1459930 | 0.870499 | 1.393025e-66 | -8.615850e-47 |
| Msa0629030 | Msa1463820 | 0.802697 | 4.959833e-49 | -8.615850e-47 |
| Msa0126430 | Msa0629030 | 0.816555 | 5.206846e-52 | -8.615850e-47 |
| Msa0126960 | Msa0629030 | 0.855471 | 6.169224e-62 | -8.615850e-47 |
| Msa0129290 | Msa0629030 | 0.917113 | 7.878579e-86 | -8.615850e-47 |
| Msa0143640 | Msa0629030 | 0.817122 | 3.883603e-52 | -8.615850e-47 |
| Msa0143830 | Msa0629030 | 0.800290 | 1.544447e-48 | -8.615850e-47 |
| Msa0143950 | Msa0629030 | 0.802774 | 4.781721e-49 | -8.615850e-47 |
| Msa0144000 | Msa0629030 | 0.805892 | 1.071754e-49 | -8.615850e-47 |
| Msa0150910 | Msa0629030 | 0.818421 | 1.977866e-52 | -8.615850e-47 |
| Msa0155850 | Msa0629030 | 0.800997 | 1.108512e-48 | -8.615850e-47 |
| Msa0163340 | Msa0629030 | 0.801278 | 9.708283e-49 | -8.615850e-47 |
| Msa0164350 | Msa0629030 | 0.807150 | 5.817450e-50 | -8.615850e-47 |
| Msa0171740 | Msa0629030 | 0.819423 | 1.170690e-52 | -8.615850e-47 |
| Msa0194370 | Msa0629030 | -0.801529 | 8.624684e-49 | -8.615850e-47 |
| Msa0196420 | Msa0629030 | 0.847151 | 1.386294e-59 | -8.615850e-47 |
| Msa0199440 | Msa0629030 | 0.802580 | 5.244743e-49 | -8.615850e-47 |
| Msa0199860 | Msa0629030 | 0.822697 | 2.062297e-53 | -8.615850e-47 |
| Msa0200080 | Msa0629030 | 0.854552 | 1.140822e-61 | -8.615850e-47 |
| Msa0200090 | Msa0629030 | 0.940509 | 2.064655e-100 | -8.615850e-47 |
| Msa0207220 | Msa0629030 | -0.804352 | 2.251550e-49 | -8.615850e-47 |
| Msa0207930 | Msa0629030 | 0.854434 | 1.234434e-61 | -8.615850e-47 |
| Msa0207970 | Msa0629030 | 0.853309 | 2.601660e-61 | -8.615850e-47 |
| Msa0214630 | Msa0629030 | 0.830469 | 2.885471e-55 | -8.615850e-47 |
| Msa0224200 | Msa0629030 | 0.801721 | 7.876931e-49 | -8.615850e-47 |
| Msa0238330 | Msa0629030 | 0.853372 | 2.495498e-61 | -8.615850e-47 |
| Msa0367350 | Msa0629030 | 0.818317 | 2.088248e-52 | -8.615850e-47 |
| Msa0372380 | Msa0629030 | -0.810120 | 1.349982e-50 | -8.615850e-47 |
| Msa0378240 | Msa0629030 | 0.825700 | 4.063766e-54 | -8.615850e-47 |
| Msa0378320 | Msa0629030 | 0.813293 | 2.754815e-51 | -8.615850e-47 |
| Msa0390200 | Msa0629030 | 0.857061 | 2.109397e-62 | -8.615850e-47 |
| Msa0396870 | Msa0629030 | 0.801460 | 8.910797e-49 | -8.615850e-47 |
| Msa0398690 | Msa0629030 | 0.806303 | 8.783150e-50 | -8.615850e-47 |
| Msa0400010 | Msa0629030 | 0.809036 | 2.307914e-50 | -8.615850e-47 |
| Msa0415010 | Msa0629030 | 0.817915 | 2.574314e-52 | -8.615850e-47 |
| Msa0420890 | Msa0629030 | 0.818406 | 1.993279e-52 | -8.615850e-47 |
| Msa0421080 | Msa0629030 | 0.899902 | 1.250323e-77 | -8.615850e-47 |
| Msa0423690 | Msa0629030 | 0.801359 | 9.347645e-49 | -8.615850e-47 |
| Msa0427660 | Msa0629030 | 0.806269 | 8.928926e-50 | -8.615850e-47 |
| Msa0433090 | Msa0629030 | 0.831517 | 1.596030e-55 | -8.615850e-47 |
| Msa0434910 | Msa0629030 | 0.810213 | 1.288774e-50 | -8.615850e-47 |
| Msa0438520 | Msa0629030 | 0.800770 | 1.233254e-48 | -8.615850e-47 |
| Msa0447160 | Msa0629030 | 0.814791 | 1.286751e-51 | -8.615850e-47 |
| Msa0459930 | Msa0629030 | 0.818167 | 2.257945e-52 | -8.615850e-47 |
| Msa0463890 | Msa0629030 | 0.816436 | 5.535602e-52 | -8.615850e-47 |
| Msa0466850 | Msa0629030 | 0.876488 | 1.341958e-68 | -8.615850e-47 |
| Msa0480530 | Msa0629030 | 0.804476 | 2.121620e-49 | -8.615850e-47 |
| Msa0480540 | Msa0629030 | 0.851273 | 9.878135e-61 | -8.615850e-47 |
| Msa0480550 | Msa0629030 | 0.844792 | 6.069092e-59 | -8.615850e-47 |
| Msa0242710 | Msa0629030 | 0.868477 | 6.343975e-66 | -8.615850e-47 |
| Msa0242720 | Msa0629030 | 0.831050 | 2.079603e-55 | -8.615850e-47 |
| Msa0244030 | Msa0629030 | 0.800830 | 1.199076e-48 | -8.615850e-47 |
| Msa0255010 | Msa0629030 | 0.835142 | 1.993117e-56 | -8.615850e-47 |
| Msa0267700 | Msa0629030 | 0.809988 | 1.441279e-50 | -8.615850e-47 |
| Msa0271700 | Msa0629030 | 0.852852 | 3.516311e-61 | -8.615850e-47 |
| Msa0271720 | Msa0629030 | 0.841812 | 3.787397e-58 | -8.615850e-47 |
| Msa0275730 | Msa0629030 | 0.824432 | 8.098929e-54 | -8.615850e-47 |
| Msa0280160 | Msa0629030 | 0.804288 | 2.320909e-49 | -8.615850e-47 |
| Msa0280930 | Msa0629030 | 0.863019 | 3.356188e-64 | -8.615850e-47 |
| Msa0280940 | Msa0629030 | 0.828666 | 7.917994e-55 | -8.615850e-47 |
| Msa0280990 | Msa0629030 | 0.831353 | 1.751220e-55 | -8.615850e-47 |
| Msa0281000 | Msa0629030 | 0.814173 | 1.763391e-51 | -8.615850e-47 |
| Msa0288280 | Msa0629030 | -0.809473 | 1.859749e-50 | -8.615850e-47 |
| Msa0294090 | Msa0629030 | 0.814104 | 1.826287e-51 | -8.615850e-47 |
| Msa0303650 | Msa0629030 | 0.802690 | 4.978456e-49 | -8.615850e-47 |
| Msa0310190 | Msa0629030 | 0.818969 | 1.484920e-52 | -8.615850e-47 |
| Msa0316230 | Msa0629030 | 0.831454 | 1.653847e-55 | -8.615850e-47 |
| Msa0319830 | Msa0629030 | 0.824715 | 6.946184e-54 | -8.615850e-47 |
| Msa0320130 | Msa0629030 | 0.910238 | 2.343019e-82 | -8.615850e-47 |
| Msa0320140 | Msa0629030 | 0.913583 | 5.202571e-84 | -8.615850e-47 |
| Msa0320160 | Msa0629030 | 0.870933 | 1.002864e-66 | -8.615850e-47 |
| Msa0324810 | Msa0629030 | 0.832282 | 1.033185e-55 | -8.615850e-47 |
| Msa0331190 | Msa0629030 | 0.803089 | 4.116644e-49 | -8.615850e-47 |
| Msa0336640 | Msa0629030 | 0.815749 | 7.880354e-52 | -8.615850e-47 |
| Msa0346170 | Msa0629030 | 0.804040 | 2.614282e-49 | -8.615850e-47 |
| Msa0350180 | Msa0629030 | 0.803032 | 4.230439e-49 | -8.615850e-47 |
| Msa0353010 | Msa0629030 | 0.816480 | 5.410901e-52 | -8.615850e-47 |
| Msa0485290 | Msa0629030 | 0.813209 | 2.874161e-51 | -8.615850e-47 |
| Msa0489370 | Msa0629030 | 0.850769 | 1.370678e-60 | -8.615850e-47 |
| Msa0491980 | Msa0629030 | 0.822339 | 2.497753e-53 | -8.615850e-47 |
| Msa0493710 | Msa0629030 | 0.808081 | 3.689379e-50 | -8.615850e-47 |
| Msa0493870 | Msa0629030 | 0.837119 | 6.273401e-57 | -8.615850e-47 |
| Msa0500440 | Msa0629030 | 0.828404 | 9.160477e-55 | -8.615850e-47 |
| Msa0510870 | Msa0629030 | 0.823294 | 1.497045e-53 | -8.615850e-47 |
| Msa0513670 | Msa0629030 | 0.871995 | 4.465581e-67 | -8.615850e-47 |
| Msa0518490 | Msa0629030 | 0.805177 | 1.513923e-49 | -8.615850e-47 |
| Msa0524710 | Msa0629030 | 0.826570 | 2.523465e-54 | -8.615850e-47 |
| Msa0531040 | Msa0629030 | 0.806153 | 9.443445e-50 | -8.615850e-47 |
| Msa0531800 | Msa0629030 | 0.817037 | 4.058987e-52 | -8.615850e-47 |
| Msa0533510 | Msa0629030 | 0.801604 | 8.325132e-49 | -8.615850e-47 |
| Msa0537210 | Msa0629030 | 0.835177 | 1.953384e-56 | -8.615850e-47 |
| Msa0538450 | Msa0629030 | 0.808424 | 3.118555e-50 | -8.615850e-47 |
| Msa0548790 | Msa0629030 | 0.824646 | 7.209587e-54 | -8.615850e-47 |
| Msa0557240 | Msa0629030 | 0.825895 | 3.653143e-54 | -8.615850e-47 |
| Msa0559440 | Msa0629030 | -0.801265 | 9.767828e-49 | -8.615850e-47 |
| Msa0561110 | Msa0629030 | 0.835156 | 1.977210e-56 | -8.615850e-47 |
| Msa0561830 | Msa0629030 | 0.852479 | 4.493085e-61 | -8.615850e-47 |
| Msa0565120 | Msa0629030 | 0.830146 | 3.461488e-55 | -8.615850e-47 |
| Msa0566530 | Msa0629030 | 0.840491 | 8.422255e-58 | -8.615850e-47 |
| Msa0568110 | Msa0629030 | 0.812177 | 4.833616e-51 | -8.615850e-47 |
| Msa0568780 | Msa0629030 | -0.802216 | 6.232153e-49 | -8.615850e-47 |
| Msa0570460 | Msa0629030 | 0.815573 | 8.628345e-52 | -8.615850e-47 |
| Msa0572700 | Msa0629030 | 0.849376 | 3.365218e-60 | -8.615850e-47 |
| Msa0576510 | Msa0629030 | -0.803078 | 4.138977e-49 | -8.615850e-47 |
| Msa0580840 | Msa0629030 | 0.819837 | 9.418547e-53 | -8.615850e-47 |
| Msa0587930 | Msa0629030 | 0.801840 | 7.447675e-49 | -8.615850e-47 |
| Msa0588730 | Msa0629030 | 0.859005 | 5.575852e-63 | -8.615850e-47 |
| Msa0594470 | Msa0629030 | 0.837402 | 5.309845e-57 | -8.615850e-47 |
| Msa0597800 | Msa0629030 | 0.816326 | 5.857234e-52 | -8.615850e-47 |
| Msa0597820 | Msa0629030 | 0.832297 | 1.024179e-55 | -8.615850e-47 |
| Msa0598610 | Msa0629030 | -0.801042 | 1.085097e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0629030 | MtrunA17_Chr4g0005131 | 97.396 | 192 | 5 | 0 | 1 | 192 | 1 | 192 | 2.42e-137 | 381 |
| Msa0629030 | MtrunA17_Chr4g0005111 | 68.817 | 186 | 56 | 1 | 6 | 191 | 7 | 190 | 1.80e-89 | 260 |
| Msa0629030 | MtrunA17_Chr4g0005091 | 63.441 | 186 | 53 | 2 | 6 | 191 | 5 | 175 | 5.74e-77 | 228 |
| Msa0629030 | MtrunA17_Chr4g0005081 | 61.413 | 184 | 65 | 3 | 13 | 191 | 15 | 197 | 8.48e-71 | 213 |
| Msa0629030 | MtrunA17_Chr4g0005071 | 60.109 | 183 | 68 | 3 | 13 | 191 | 15 | 196 | 2.21e-68 | 207 |
| Msa0629030 | MtrunA17_Chr7g0243501 | 57.447 | 188 | 75 | 2 | 7 | 191 | 7 | 192 | 8.58e-67 | 202 |
| Msa0629030 | MtrunA17_Chr4g0005041 | 61.047 | 172 | 60 | 3 | 24 | 191 | 30 | 198 | 5.84e-66 | 201 |
| Msa0629030 | MtrunA17_Chr4g0005031 | 56.497 | 177 | 74 | 2 | 17 | 191 | 46 | 221 | 5.40e-65 | 199 |
| Msa0629030 | MtrunA17_Chr4g0005011 | 57.143 | 168 | 66 | 4 | 24 | 188 | 30 | 194 | 3.66e-62 | 191 |
| Msa0629030 | MtrunA17_Chr1g0175911 | 47.668 | 193 | 91 | 5 | 6 | 191 | 3 | 192 | 3.83e-54 | 171 |
| Msa0629030 | MtrunA17_Chr7g0259071 | 42.077 | 183 | 99 | 5 | 11 | 191 | 14 | 191 | 2.47e-47 | 153 |
| Msa0629030 | MtrunA17_Chr7g0259091 | 39.773 | 176 | 103 | 3 | 18 | 191 | 20 | 194 | 8.26e-44 | 144 |
| Msa0629030 | MtrunA17_Chr4g0037481 | 42.105 | 152 | 88 | 0 | 40 | 191 | 41 | 192 | 5.49e-43 | 142 |
| Msa0629030 | MtrunA17_Chr7g0259101 | 40.909 | 176 | 101 | 3 | 18 | 191 | 20 | 194 | 1.46e-42 | 146 |
| Msa0629030 | MtrunA17_Chr7g0259101 | 38.068 | 176 | 106 | 3 | 18 | 191 | 219 | 393 | 1.56e-40 | 141 |
| Msa0629030 | MtrunA17_Chr1g0177051 | 45.395 | 152 | 80 | 3 | 40 | 190 | 36 | 185 | 2.27e-42 | 140 |
| Msa0629030 | MtrunA17_Chr7g0259121 | 42.857 | 168 | 91 | 3 | 29 | 191 | 26 | 193 | 2.25e-40 | 136 |
| Msa0629030 | MtrunA17_Chr3g0085311 | 40.306 | 196 | 103 | 4 | 1 | 190 | 1 | 188 | 2.48e-36 | 125 |
| Msa0629030 | MtrunA17_Chr3g0085291 | 38.860 | 193 | 108 | 4 | 1 | 190 | 1 | 186 | 5.38e-35 | 121 |
| Msa0629030 | MtrunA17_Chr3g0136641 | 40.373 | 161 | 93 | 2 | 32 | 191 | 30 | 188 | 8.60e-35 | 121 |
| Msa0629030 | MtrunA17_Chr5g0446751 | 39.267 | 191 | 102 | 5 | 7 | 191 | 7 | 189 | 2.94e-33 | 117 |
| Msa0629030 | MtrunA17_Chr3g0136631 | 36.269 | 193 | 112 | 4 | 4 | 191 | 3 | 189 | 2.97e-33 | 117 |
| Msa0629030 | MtrunA17_Chr3g0085321 | 35.897 | 195 | 113 | 5 | 1 | 190 | 1 | 188 | 1.48e-32 | 115 |
| Msa0629030 | MtrunA17_Chr3g0085301 | 40.411 | 146 | 84 | 2 | 45 | 190 | 51 | 193 | 2.08e-31 | 112 |
| Msa0629030 | MtrunA17_Chr4g0040551 | 36.735 | 147 | 90 | 1 | 45 | 191 | 42 | 185 | 5.98e-30 | 108 |
| Msa0629030 | MtrunA17_Chr3g0090231 | 34.254 | 181 | 115 | 2 | 12 | 191 | 8 | 185 | 7.41e-30 | 108 |
| Msa0629030 | MtrunA17_Chr4g0024951 | 34.483 | 145 | 88 | 2 | 45 | 186 | 33 | 173 | 1.14e-22 | 89.7 |
| Msa0629030 | MtrunA17_Chr4g0068391 | 37.500 | 144 | 87 | 2 | 49 | 191 | 39 | 180 | 2.62e-22 | 89.0 |
| Msa0629030 | MtrunA17_Chr4g0024961 | 33.793 | 145 | 89 | 2 | 45 | 186 | 33 | 173 | 1.43e-21 | 87.0 |
| Msa0629030 | MtrunA17_Chr4g0068381 | 32.515 | 163 | 106 | 2 | 29 | 191 | 22 | 180 | 4.42e-21 | 85.5 |
| Msa0629030 | MtrunA17_Chr8g0387711 | 32.298 | 161 | 83 | 5 | 30 | 174 | 18 | 168 | 9.61e-14 | 66.2 |
| Msa0629030 | MtrunA17_Chr1g0169281 | 38.298 | 94 | 57 | 1 | 78 | 171 | 141 | 233 | 5.69e-13 | 65.5 |
| Msa0629030 | MtrunA17_Chr1g0169511 | 39.362 | 94 | 56 | 1 | 78 | 171 | 135 | 227 | 1.89e-12 | 63.9 |
| Msa0629030 | MtrunA17_Chr1g0169291 | 39.362 | 94 | 56 | 1 | 78 | 171 | 135 | 227 | 2.05e-12 | 63.9 |
| Msa0629030 | MtrunA17_Chr8g0387701 | 33.333 | 135 | 78 | 4 | 49 | 174 | 41 | 172 | 1.36e-11 | 60.8 |
| Msa0629030 | MtrunA17_Chr8g0370501 | 26.056 | 142 | 103 | 1 | 46 | 187 | 42 | 181 | 6.93e-11 | 58.9 |
| Msa0629030 | MtrunA17_Chr8g0370591 | 26.056 | 142 | 103 | 1 | 46 | 187 | 42 | 181 | 7.59e-11 | 58.5 |
| Msa0629030 | MtrunA17_Chr1g0212861 | 34.711 | 121 | 68 | 4 | 79 | 190 | 235 | 353 | 9.04e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0629030 | AT1G58170.1 | 53.476 | 187 | 74 | 4 | 10 | 191 | 7 | 185 | 5.44e-65 | 198 |
| Msa0629030 | AT1G55210.1 | 51.323 | 189 | 85 | 5 | 6 | 191 | 3 | 187 | 4.05e-57 | 178 |
| Msa0629030 | AT1G55210.2 | 51.323 | 189 | 85 | 5 | 6 | 191 | 3 | 187 | 4.05e-57 | 178 |
| Msa0629030 | AT5G49040.1 | 50.847 | 177 | 84 | 2 | 17 | 191 | 16 | 191 | 9.09e-56 | 175 |
| Msa0629030 | AT3G13650.1 | 51.445 | 173 | 79 | 4 | 20 | 191 | 18 | 186 | 8.04e-53 | 167 |
| Msa0629030 | AT3G13662.1 | 49.425 | 174 | 78 | 5 | 7 | 178 | 7 | 172 | 5.29e-47 | 152 |
| Msa0629030 | AT1G65870.1 | 47.260 | 146 | 76 | 1 | 45 | 190 | 45 | 189 | 2.95e-45 | 148 |
| Msa0629030 | AT5G49030.3 | 50.602 | 166 | 79 | 2 | 17 | 180 | 16 | 180 | 3.49e-44 | 157 |
| Msa0629030 | AT3G13660.1 | 57.143 | 119 | 51 | 0 | 73 | 191 | 7 | 125 | 2.63e-42 | 139 |
| Msa0629030 | AT5G42500.1 | 41.818 | 165 | 93 | 2 | 26 | 190 | 24 | 185 | 1.80e-40 | 136 |
| Msa0629030 | AT1G22900.1 | 46.575 | 146 | 75 | 2 | 45 | 190 | 51 | 193 | 4.39e-39 | 132 |
| Msa0629030 | AT5G42510.1 | 41.875 | 160 | 90 | 2 | 31 | 190 | 26 | 182 | 5.06e-39 | 132 |
| Msa0629030 | AT2G21100.1 | 41.447 | 152 | 88 | 1 | 39 | 190 | 37 | 187 | 6.59e-38 | 129 |
| Msa0629030 | AT2G21100.2 | 41.447 | 152 | 88 | 1 | 39 | 190 | 37 | 187 | 6.59e-38 | 129 |
| Msa0629030 | AT3G58090.1 | 46.364 | 110 | 59 | 0 | 81 | 190 | 162 | 271 | 2.17e-32 | 117 |
| Msa0629030 | AT4G38700.1 | 34.694 | 196 | 117 | 5 | 1 | 191 | 1 | 190 | 1.99e-28 | 105 |
| Msa0629030 | AT2G21110.1 | 32.432 | 185 | 116 | 4 | 11 | 191 | 7 | 186 | 5.73e-28 | 103 |
| Msa0629030 | AT4G23690.1 | 36.029 | 136 | 77 | 5 | 36 | 166 | 32 | 162 | 2.24e-15 | 71.2 |
| Msa0629030 | AT4G11210.1 | 31.579 | 171 | 103 | 6 | 12 | 178 | 7 | 167 | 4.18e-14 | 67.8 |
| Msa0629030 | AT4G11190.1 | 30.935 | 139 | 85 | 4 | 44 | 178 | 36 | 167 | 1.42e-12 | 63.5 |
Find 48 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAAAAGAGTTGTTAAATT+TGG | 0.090030 | 4_3:-9839294 | None:intergenic |
| AAGTTTGGTGTCAAGGTTAA+AGG | 0.229203 | 4_3:-9839347 | None:intergenic |
| AAGTAGCTGCTAGCCACTTT+AGG | 0.300872 | 4_3:+9839207 | Msa0629030:CDS |
| CTAAAAGAGTTGTTAAATTT+GGG | 0.308915 | 4_3:-9839293 | None:intergenic |
| TTGGGAAGTGGTTGAATGAT+TGG | 0.327500 | 4_3:-9839275 | None:intergenic |
| TTGTTTGAAGGAAAGTATAA+TGG | 0.337558 | 4_3:+9839458 | Msa0629030:CDS |
| GGGTGTAGAAAGAGAGTAGA+AGG | 0.394648 | 4_3:-9839115 | None:intergenic |
| GGGAGTACCATTACTATCTC+TGG | 0.407901 | 4_3:+9839479 | Msa0629030:CDS |
| ATGAACTTTGCCTTGTTTGA+AGG | 0.417944 | 4_3:+9839446 | Msa0629030:CDS |
| TGTTTGAAGGAAAGTATAAT+GGG | 0.433452 | 4_3:+9839459 | Msa0629030:CDS |
| CAGCATATCCCTTAGCAAAT+CGG | 0.436333 | 4_3:-9839562 | None:intergenic |
| ATTTATTGAGCTTACAAAAC+CGG | 0.438981 | 4_3:-9839165 | None:intergenic |
| AGTTTGGTGTCAAGGTTAAA+GGG | 0.445162 | 4_3:-9839346 | None:intergenic |
| TACCAGTGATCGGTGGTAGC+GGG | 0.446390 | 4_3:+9839534 | Msa0629030:CDS |
| CTAGCCACTTTAGGTTCTAC+TGG | 0.448964 | 4_3:+9839216 | Msa0629030:CDS |
| AACTTGACCTCAAAATTGTT+AGG | 0.452723 | 4_3:+9839365 | Msa0629030:CDS |
| TACTTTCTTTGTAAGCAACT+TGG | 0.452780 | 4_3:-9839189 | None:intergenic |
| AAGGAACGTCGCAAACGATA+AGG | 0.481824 | 4_3:+9839502 | Msa0629030:CDS |
| ACTTTCTTTGTAAGCAACTT+GGG | 0.483229 | 4_3:-9839188 | None:intergenic |
| TGACCTCAAAATTGTTAGGT+AGG | 0.497868 | 4_3:+9839369 | Msa0629030:CDS |
| TACACCCTCACAATTGTCAC+TGG | 0.498118 | 4_3:+9839131 | Msa0629030:CDS |
| AAATTGTTAGGTAGGGCTCA+AGG | 0.500966 | 4_3:+9839377 | Msa0629030:CDS |
| TGAGGTCAAGTTTGGTGTCA+AGG | 0.506209 | 4_3:-9839354 | None:intergenic |
| GAGTTGTTAAATTTGGGAAG+TGG | 0.508093 | 4_3:-9839287 | None:intergenic |
| GTTCTACTGGCAAGACATAG+TGG | 0.508556 | 4_3:+9839229 | Msa0629030:CDS |
| ACCCCGCTACCACCGATCAC+TGG | 0.532338 | 4_3:-9839536 | None:intergenic |
| TTACCAGTGATCGGTGGTAG+CGG | 0.542224 | 4_3:+9839533 | Msa0629030:CDS |
| AATTGTTAGGTAGGGCTCAA+GGG | 0.543701 | 4_3:+9839378 | Msa0629030:CDS |
| TGGTTGAATGATTGGAATGG+AGG | 0.546721 | 4_3:-9839267 | None:intergenic |
| GTATTCAACCACGGTATCCC+CGG | 0.549581 | 4_3:-9839615 | None:intergenic |
| CTTGCCAGTAGAACCTAAAG+TGG | 0.555578 | 4_3:-9839220 | None:intergenic |
| GACCTCAAAATTGTTAGGTA+GGG | 0.562175 | 4_3:+9839370 | Msa0629030:CDS |
| ACCAGTGATCGGTGGTAGCG+GGG | 0.577667 | 4_3:+9839535 | Msa0629030:CDS |
| GTCACTGGACAAGATGAGAC+CGG | 0.584277 | 4_3:+9839146 | Msa0629030:CDS |
| AAGTGGTTGAATGATTGGAA+TGG | 0.586361 | 4_3:-9839270 | None:intergenic |
| ATTATACTTTCCTTCAAACA+AGG | 0.587601 | 4_3:-9839456 | None:intergenic |
| AACCATAAGAAAATCAAGCT+CGG | 0.592742 | 4_3:-9839423 | None:intergenic |
| GTTAGAGAGTTACCAGTGAT+CGG | 0.602234 | 4_3:+9839524 | Msa0629030:CDS |
| TTCTACTGGCAAGACATAGT+GGG | 0.624056 | 4_3:+9839230 | Msa0629030:CDS |
| TTTCATAACCGGGGATACCG+TGG | 0.641517 | 4_3:+9839607 | Msa0629030:CDS |
| GTACCATTACTATCTCTGGA+AGG | 0.647934 | 4_3:+9839483 | Msa0629030:CDS |
| ATAAACATTGTATTCAACCA+CGG | 0.650255 | 4_3:-9839624 | None:intergenic |
| GTTCCTTCCAGAGATAGTAA+TGG | 0.662479 | 4_3:-9839486 | None:intergenic |
| AAGCTCGGTTTGCGATGTAG+CGG | 0.665030 | 4_3:-9839408 | None:intergenic |
| TACTGGCAAGACATAGTGGG+AGG | 0.669570 | 4_3:+9839233 | Msa0629030:CDS |
| CTTGTCCAGTGACAATTGTG+AGG | 0.674513 | 4_3:-9839136 | None:intergenic |
| TTGTCCAGTGACAATTGTGA+GGG | 0.677874 | 4_3:-9839135 | None:intergenic |
| AGAGAGTTACCAGTGATCGG+TGG | 0.703961 | 4_3:+9839527 | Msa0629030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGGAAGAAAAAAAGTTTTT+GGG | - | chr4_3:9839099-9839118 | None:intergenic | 20.0% |
| !! | CTAAAAGAGTTGTTAAATTT+GGG | - | chr4_3:9839296-9839315 | None:intergenic | 20.0% |
| !! | ACTAAAAGAGTTGTTAAATT+TGG | - | chr4_3:9839297-9839316 | None:intergenic | 20.0% |
| !! | GAAGGAAGAAAAAAAGTTTT+TGG | - | chr4_3:9839100-9839119 | None:intergenic | 25.0% |
| ! | ATTTATTGAGCTTACAAAAC+CGG | - | chr4_3:9839168-9839187 | None:intergenic | 25.0% |
| ! | ATTATACTTTCCTTCAAACA+AGG | - | chr4_3:9839459-9839478 | None:intergenic | 25.0% |
| !! | TTGTTTGAAGGAAAGTATAA+TGG | + | chr4_3:9839458-9839477 | Msa0629030:CDS | 25.0% |
| !! | TGTTTGAAGGAAAGTATAAT+GGG | + | chr4_3:9839459-9839478 | Msa0629030:CDS | 25.0% |
| !!! | ATCTCTTTTGATTTCATAAC+CGG | + | chr4_3:9839596-9839615 | Msa0629030:CDS | 25.0% |
| ! | ATAAACATTGTATTCAACCA+CGG | - | chr4_3:9839627-9839646 | None:intergenic | 25.0% |
| ACTTTCTTTGTAAGCAACTT+GGG | - | chr4_3:9839191-9839210 | None:intergenic | 30.0% | |
| TACTTTCTTTGTAAGCAACT+TGG | - | chr4_3:9839192-9839211 | None:intergenic | 30.0% | |
| ! | AACAACTCTTTTAGTGCTTT+TGG | + | chr4_3:9839302-9839321 | Msa0629030:CDS | 30.0% |
| !!! | AACAATTTTGAGGTCAAGTT+TGG | - | chr4_3:9839365-9839384 | None:intergenic | 30.0% |
| AACTTGACCTCAAAATTGTT+AGG | + | chr4_3:9839365-9839384 | Msa0629030:CDS | 30.0% | |
| AACCATAAGAAAATCAAGCT+CGG | - | chr4_3:9839426-9839445 | None:intergenic | 30.0% | |
| !!! | TCTCTTTTGATTTCATAACC+GGG | + | chr4_3:9839597-9839616 | Msa0629030:CDS | 30.0% |
| AAGTGGTTGAATGATTGGAA+TGG | - | chr4_3:9839273-9839292 | None:intergenic | 35.0% | |
| GAGTTGTTAAATTTGGGAAG+TGG | - | chr4_3:9839290-9839309 | None:intergenic | 35.0% | |
| !! | CTCTTTTAGTGCTTTTGGTT+TGG | + | chr4_3:9839307-9839326 | Msa0629030:CDS | 35.0% |
| !! | AGTTTGGTGTCAAGGTTAAA+GGG | - | chr4_3:9839349-9839368 | None:intergenic | 35.0% |
| !! | AAGTTTGGTGTCAAGGTTAA+AGG | - | chr4_3:9839350-9839369 | None:intergenic | 35.0% |
| TGACCTCAAAATTGTTAGGT+AGG | + | chr4_3:9839369-9839388 | Msa0629030:CDS | 35.0% | |
| GACCTCAAAATTGTTAGGTA+GGG | + | chr4_3:9839370-9839389 | Msa0629030:CDS | 35.0% | |
| ! | AACCGAGCTTGATTTTCTTA+TGG | + | chr4_3:9839421-9839440 | Msa0629030:CDS | 35.0% |
| !! | ATGAACTTTGCCTTGTTTGA+AGG | + | chr4_3:9839446-9839465 | Msa0629030:CDS | 35.0% |
| !!! | CTCTTTTGATTTCATAACCG+GGG | + | chr4_3:9839598-9839617 | Msa0629030:CDS | 35.0% |
| TTGTCCAGTGACAATTGTGA+GGG | - | chr4_3:9839138-9839157 | None:intergenic | 40.0% | |
| TTCTACTGGCAAGACATAGT+GGG | + | chr4_3:9839230-9839249 | Msa0629030:CDS | 40.0% | |
| TGGTTGAATGATTGGAATGG+AGG | - | chr4_3:9839270-9839289 | None:intergenic | 40.0% | |
| TTGGGAAGTGGTTGAATGAT+TGG | - | chr4_3:9839278-9839297 | None:intergenic | 40.0% | |
| !!! | TTAGTGCTTTTGGTTTGGTG+AGG | + | chr4_3:9839312-9839331 | Msa0629030:CDS | 40.0% |
| ! | AGCCCTACCTAACAATTTTG+AGG | - | chr4_3:9839375-9839394 | None:intergenic | 40.0% |
| AAATTGTTAGGTAGGGCTCA+AGG | + | chr4_3:9839377-9839396 | Msa0629030:CDS | 40.0% | |
| AATTGTTAGGTAGGGCTCAA+GGG | + | chr4_3:9839378-9839397 | Msa0629030:CDS | 40.0% | |
| GTACCATTACTATCTCTGGA+AGG | + | chr4_3:9839483-9839502 | Msa0629030:CDS | 40.0% | |
| GTTCCTTCCAGAGATAGTAA+TGG | - | chr4_3:9839489-9839508 | None:intergenic | 40.0% | |
| GTTAGAGAGTTACCAGTGAT+CGG | + | chr4_3:9839524-9839543 | Msa0629030:CDS | 40.0% | |
| CAGCATATCCCTTAGCAAAT+CGG | - | chr4_3:9839565-9839584 | None:intergenic | 40.0% | |
| GGGTGTAGAAAGAGAGTAGA+AGG | - | chr4_3:9839118-9839137 | None:intergenic | 45.0% | |
| TACACCCTCACAATTGTCAC+TGG | + | chr4_3:9839131-9839150 | Msa0629030:CDS | 45.0% | |
| CTTGTCCAGTGACAATTGTG+AGG | - | chr4_3:9839139-9839158 | None:intergenic | 45.0% | |
| ! | AAGTAGCTGCTAGCCACTTT+AGG | + | chr4_3:9839207-9839226 | Msa0629030:CDS | 45.0% |
| ! | CTAGCCACTTTAGGTTCTAC+TGG | + | chr4_3:9839216-9839235 | Msa0629030:CDS | 45.0% |
| CTTGCCAGTAGAACCTAAAG+TGG | - | chr4_3:9839223-9839242 | None:intergenic | 45.0% | |
| GTTCTACTGGCAAGACATAG+TGG | + | chr4_3:9839229-9839248 | Msa0629030:CDS | 45.0% | |
| !! | TGAGGTCAAGTTTGGTGTCA+AGG | - | chr4_3:9839357-9839376 | None:intergenic | 45.0% |
| !! | GGGAGTACCATTACTATCTC+TGG | + | chr4_3:9839479-9839498 | Msa0629030:CDS | 45.0% |
| AAGGAACGTCGCAAACGATA+AGG | + | chr4_3:9839502-9839521 | Msa0629030:CDS | 45.0% | |
| !!! | GGGGTTTTCCGATTTGCTAA+GGG | + | chr4_3:9839554-9839573 | Msa0629030:CDS | 45.0% |
| GTCACTGGACAAGATGAGAC+CGG | + | chr4_3:9839146-9839165 | Msa0629030:CDS | 50.0% | |
| ! | TACTGGCAAGACATAGTGGG+AGG | + | chr4_3:9839233-9839252 | Msa0629030:CDS | 50.0% |
| ! | AAGCTCGGTTTGCGATGTAG+CGG | - | chr4_3:9839411-9839430 | None:intergenic | 50.0% |
| AGAGAGTTACCAGTGATCGG+TGG | + | chr4_3:9839527-9839546 | Msa0629030:CDS | 50.0% | |
| TTACCAGTGATCGGTGGTAG+CGG | + | chr4_3:9839533-9839552 | Msa0629030:CDS | 50.0% | |
| !!! | CGGGGTTTTCCGATTTGCTA+AGG | + | chr4_3:9839553-9839572 | Msa0629030:CDS | 50.0% |
| TTTCATAACCGGGGATACCG+TGG | + | chr4_3:9839607-9839626 | Msa0629030:CDS | 50.0% | |
| GTATTCAACCACGGTATCCC+CGG | - | chr4_3:9839618-9839637 | None:intergenic | 50.0% | |
| TACCAGTGATCGGTGGTAGC+GGG | + | chr4_3:9839534-9839553 | Msa0629030:CDS | 55.0% | |
| ! | ACCAGTGATCGGTGGTAGCG+GGG | + | chr4_3:9839535-9839554 | Msa0629030:CDS | 60.0% |
| ACCCCGCTACCACCGATCAC+TGG | - | chr4_3:9839539-9839558 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 9839086 | 9839664 | 9839086 | ID=Msa0629030;Name=Msa0629030 |
| chr4_3 | mRNA | 9839086 | 9839664 | 9839086 | ID=Msa0629030-mRNA-1;Parent=Msa0629030;Name=Msa0629030-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|192 |
| chr4_3 | exon | 9839086 | 9839664 | 9839086 | ID=Msa0629030-mRNA-1:exon:2960;Parent=Msa0629030-mRNA-1 |
| chr4_3 | CDS | 9839086 | 9839664 | 9839086 | ID=Msa0629030-mRNA-1:cds;Parent=Msa0629030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
