AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1080150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080150 MtrunA17_Chr7g0265781 92.441 979 43 6 1 949 51 1028 0.0 1820
Msa1080150 MtrunA17_Chr1g0179281 53.792 1002 377 24 3 949 51 1021 0.0 924
Msa1080150 MtrunA17_Chr6g0452881 36.712 365 179 10 28 353 37 388 8.59e-56 208
Msa1080150 MtrunA17_Chr6g0452881 35.632 174 105 5 771 939 645 816 1.63e-28 123
Msa1080150 MtrunA17_Chr4g0037071 33.333 174 109 5 771 939 15 186 1.10e-24 103
Msa1080150 MtrunA17_Chr6g0452891 33.529 170 79 8 777 936 72 217 1.75e-20 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080150 AT2G36480.2 50.498 402 167 7 3 379 54 448 2.55e-108 358
Msa1080150 AT2G36480.2 40.164 244 134 5 698 940 716 948 3.97e-45 176
Msa1080150 AT2G36480.1 50.498 402 167 7 3 379 54 448 2.55e-108 358
Msa1080150 AT2G36480.1 40.164 244 134 5 698 940 716 948 3.97e-45 176
Msa1080150 AT4G04885.1 40.227 353 149 13 20 350 52 364 1.75e-56 210
Msa1080150 AT4G04885.1 37.427 171 90 6 774 934 625 788 5.50e-30 128
Msa1080150 AT1G66500.1 31.977 172 96 7 774 935 227 387 2.86e-20 95.1
Msa1080150 AT5G43620.1 31.818 176 92 7 774 935 220 381 7.45e-20 93.6

Find 295 sgRNAs with CRISPR-Local

Find 571 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTGCCTTTCTAAATATT+TGG 0.133248 7_2:+79437950 None:intergenic
ACTTCTCGTAATTGATTTAT+TGG 0.142148 7_2:+79435059 None:intergenic
GACAGTATTGTTAAGAATAT+TGG 0.166316 7_2:-79438542 Msa1080150:CDS
ATTGCTGCTGTCCCGTAATT+TGG 0.179531 7_2:+79435526 None:intergenic
AGCTGCTGTTGCTGAGGTTT+TGG 0.194493 7_2:+79435222 None:intergenic
TGTCAAATCTACACATTCTT+TGG 0.195787 7_2:-79433287 Msa1080150:three_prime_UTR
TGGATTCAAGGTATTCTTAT+TGG 0.211269 7_2:+79434798 None:intergenic
CCCTCCTTCGATGCGTAATT+TGG 0.215915 7_2:-79435418 Msa1080150:CDS
ACCTGGCTTCATATTCAATT+TGG 0.235053 7_2:+79435658 None:intergenic
TTTATGCAGCTGATAAATTA+AGG 0.237610 7_2:+79433209 None:intergenic
ACATGTAATCGAAGAATTAT+TGG 0.248282 7_2:-79434473 Msa1080150:CDS
TTCTAGTGTTTCAAATAGTT+TGG 0.249454 7_2:-79436975 Msa1080150:CDS
GAGCTTAAAAGATTTGAAAT+TGG 0.266321 7_2:+79434778 None:intergenic
TCTTAAAACATCTCAACATT+TGG 0.272228 7_2:-79435373 Msa1080150:CDS
TTATTAACCTTTGTTCCAAT+TGG 0.272469 7_2:+79435767 None:intergenic
CCCGACCACATTAATTTCTT+CGG 0.274359 7_2:-79434974 Msa1080150:CDS
CTACTTTCCATCTCGCTATC+TGG 0.283979 7_2:+79434088 None:intergenic
AGTAACTGTCCATCTCAAAT+AGG 0.286697 7_2:-79435027 Msa1080150:CDS
CGTTGCCTTTCTAAATATTT+GGG 0.287620 7_2:+79437951 None:intergenic
CCGACCACATTAATTTCTTC+GGG 0.290620 7_2:-79434973 Msa1080150:CDS
TGCCATTCGTTCCAATGTTC+AGG 0.291207 7_2:-79435313 Msa1080150:CDS
GCCTTCCCTTGCGGTAGTTT+TGG 0.294785 7_2:+79434901 None:intergenic
AGCACCGAAGTCTGTGAATT+TGG 0.302197 7_2:-79436846 Msa1080150:CDS
ATAGTCAAATTAGTAATTAT+CGG 0.306134 7_2:+79439629 None:intergenic
ACAGTATTGTTAAGAATATT+GGG 0.313571 7_2:-79438541 Msa1080150:CDS
GGAGGGTTGCGTATTGTTAC+TGG 0.318530 7_2:+79435435 None:intergenic
GGGTACCCTTGATAAGCTTC+TGG 0.325665 7_2:+79433831 None:intergenic
GAGACTGAGAATCACTTCTA+AGG 0.328918 7_2:+79438003 None:intergenic
TTCCAATTGGGTGTGTGATT+TGG 0.329546 7_2:+79435780 None:intergenic
ATTGCGGTGATTGTGGTATT+AGG 0.330585 7_2:-79434435 Msa1080150:CDS
CTTCTCGTAATTGATTTATT+GGG 0.331979 7_2:+79435060 None:intergenic
GTCAAATCTACACATTCTTT+GGG 0.350866 7_2:-79433286 Msa1080150:three_prime_UTR
TATTAACCTTTGTTCCAATT+GGG 0.351939 7_2:+79435768 None:intergenic
TGGTGCTGCACGTCCATGGC+TGG 0.353776 7_2:-79437187 Msa1080150:CDS
TAAAGGAGTATTTGATGATA+TGG 0.354621 7_2:-79437261 Msa1080150:CDS
GATGGCCGATGAAGACAATT+TGG 0.356986 7_2:-79436684 Msa1080150:intron
CAATAGGAATGTCCAAATTA+CGG 0.359280 7_2:-79435538 Msa1080150:CDS
ACCATTTCTTTGCCCGGATA+AGG 0.361597 7_2:+79436901 None:intergenic
CTTGATGCGGCGGTGGTTGA+GGG 0.366523 7_2:+79439705 None:intergenic
AAGATTTGAAATTGGATTCA+AGG 0.366649 7_2:+79434786 None:intergenic
GTTTCAAATAGTTTGGGTTC+AGG 0.366649 7_2:-79436968 Msa1080150:CDS
GATAAAGCGAAGGCAGCTTT+TGG 0.368771 7_2:+79438570 None:intergenic
ACTAATTTGACTATAATTGC+TGG 0.373637 7_2:-79439620 Msa1080150:CDS
GGTGTTGCAGAGACCTTATC+CGG 0.374381 7_2:-79436914 Msa1080150:CDS
CTTAAAACATCTCAACATTT+GGG 0.380724 7_2:-79435372 Msa1080150:CDS
ATTGGAACAAAGGTTAATAA+AGG 0.381415 7_2:-79435764 Msa1080150:CDS
TCTTGATGCGGCGGTGGTTG+AGG 0.387175 7_2:+79439704 None:intergenic
TCTAGTGTTTCAAATAGTTT+GGG 0.389260 7_2:-79436974 Msa1080150:CDS
CAAAATTTGTTTGACTGCTT+AGG 0.389354 7_2:+79433742 None:intergenic
AGCATCATCTGCCTCAATTC+TGG 0.390784 7_2:+79434594 None:intergenic
TGACAGCAATGCTTTCAGTT+TGG 0.399143 7_2:+79434674 None:intergenic
GCATAATATTATCCGCCGTT+TGG 0.399325 7_2:+79433361 None:intergenic
TCTGCGGCGAAATCGATTGC+TGG 0.405177 7_2:-79439587 Msa1080150:CDS
GTCACTTTGGCTTTGACTAA+AGG 0.406869 7_2:+79435141 None:intergenic
AAGAAACAACTACCATCATC+TGG 0.412085 7_2:-79435728 Msa1080150:CDS
TCTATGCCGCATACAACAAT+AGG 0.416550 7_2:-79435554 Msa1080150:CDS
ATTTGCATATTTAACACCTA+TGG 0.416585 7_2:-79433581 Msa1080150:three_prime_UTR
TTTAACACCTATGGGGATAC+CGG 0.416971 7_2:-79433572 Msa1080150:three_prime_UTR
AAAACCTCAGCAACAGCAGC+TGG 0.418357 7_2:-79435220 Msa1080150:CDS
ACTGGGACAGCTGAAGAAAC+AGG 0.419209 7_2:+79434625 None:intergenic
ACAAAAGAAAGAGAACAAAA+TGG 0.424354 7_2:-79434367 Msa1080150:CDS
AATAGGAATGTCCAAATTAC+GGG 0.424890 7_2:-79435537 Msa1080150:CDS
TAAATCAATTACGAGAAGTC+TGG 0.426887 7_2:-79435055 Msa1080150:CDS
CAATTGGGTGTGTGATTTGG+AGG 0.427496 7_2:+79435783 None:intergenic
TAAAACAGACGGGAGTCAAT+TGG 0.428390 7_2:-79434230 Msa1080150:CDS
ATTCATAACTTGTATTGCAT+TGG 0.428430 7_2:-79433867 Msa1080150:three_prime_UTR
CCGAAGAAATTAATGTGGTC+GGG 0.430521 7_2:+79434974 None:intergenic
ACCTTATCCGGGCAAAGAAA+TGG 0.430710 7_2:-79436902 Msa1080150:CDS
TCTCGCTATCTGGATTGTTC+AGG 0.430835 7_2:+79434098 None:intergenic
CTCCAAATCACACACCCAAT+TGG 0.432800 7_2:-79435782 Msa1080150:CDS
TGCATTTCTCGAATGACATC+AGG 0.434562 7_2:+79434499 None:intergenic
AGCTGATGCACCACGATTGT+TGG 0.437300 7_2:+79434837 None:intergenic
TTCATATTCAATTTGGCACT+TGG 0.438918 7_2:+79435665 None:intergenic
GGGTTTAAGCCTACTCGGTC+AGG 0.439200 7_2:-79435006 Msa1080150:CDS
GTAACTGTCCATCTCAAATA+GGG 0.440250 7_2:-79435026 Msa1080150:CDS
CGTTGCATACTAAAACTAGA+TGG 0.443364 7_2:-79433801 Msa1080150:three_prime_UTR
ACATCAGATGACTGGATTGC+TGG 0.443441 7_2:-79434313 Msa1080150:CDS
TTTAGTATGCAACGAGAACC+TGG 0.444406 7_2:+79433810 None:intergenic
GCTTTGGTGCTGCACGTCCA+TGG 0.445719 7_2:-79437191 Msa1080150:CDS
GGTTCAGGTGTTGGAAGAAC+CGG 0.446940 7_2:-79436953 Msa1080150:CDS
AAGAGCATCGGCGGAGCCTA+TGG 0.447109 7_2:-79437013 Msa1080150:CDS
TGCAGCACCAAAGCTCGATC+TGG 0.447225 7_2:+79437200 None:intergenic
GCAGTGCAATGTCAAAGAAC+TGG 0.449666 7_2:-79436805 Msa1080150:CDS
CAACGACAACAACCTACCTC+TGG 0.451366 7_2:-79439809 Msa1080150:five_prime_UTR
CACGTCCATGGCTGGATCCT+AGG 0.451919 7_2:-79437179 Msa1080150:CDS
AGAGTAGGTGAATAATCATT+TGG 0.453893 7_2:+79434925 None:intergenic
GTAGCATAGCGCACAACATT+TGG 0.454690 7_2:+79433115 None:intergenic
CGATTGTTGGAGGAAGTAGA+TGG 0.455761 7_2:+79434850 None:intergenic
CTCAAGTTGTTAGAGACATT+AGG 0.457050 7_2:+79436719 None:intergenic
AATCATTTCACCTACCCTGC+TGG 0.462666 7_2:+79437917 None:intergenic
TCGATTGCTGGTGCTGTTTG+TGG 0.463089 7_2:-79439575 Msa1080150:CDS
TTTGCATATTTAACACCTAT+GGG 0.466087 7_2:-79433580 Msa1080150:three_prime_UTR
AACGTCTTCAGCAGTCCAGC+AGG 0.469296 7_2:-79437932 Msa1080150:CDS
ACCAGCTCTTGATGCGGCGG+TGG 0.470882 7_2:+79439698 None:intergenic
AGAGGAGTTCATGTGGGATG+AGG 0.471007 7_2:-79436768 Msa1080150:CDS
CTTGTATTGCATTGGAGCCA+AGG 0.471717 7_2:-79433859 Msa1080150:three_prime_UTR
AACTTCAATCCCGCGGTCAA+TGG 0.473692 7_2:-79438047 Msa1080150:CDS
ACAGAAATTAGAAATCTCAT+TGG 0.476065 7_2:-79434535 Msa1080150:CDS
AGAGAGGCCAGATCGAGCTT+TGG 0.476139 7_2:-79437207 Msa1080150:CDS
ATAAGCTTCTGGCTTAACCT+TGG 0.478038 7_2:+79433842 None:intergenic
CTCCTGTCCATTCAAGTATG+AGG 0.480383 7_2:-79438136 Msa1080150:CDS
TTGAGGAAACGTTCGTGAAG+TGG 0.480657 7_2:+79439829 None:intergenic
ATCACAAGAGAAGGATATGC+GGG 0.481020 7_2:-79435274 Msa1080150:CDS
AATAGTTTGGGTTCAGGTGT+TGG 0.482447 7_2:-79436962 Msa1080150:CDS
GGAGGCATTCATCATTATCA+TGG 0.484266 7_2:-79435706 Msa1080150:CDS
AAACTACCGCAAGGGAAGGC+TGG 0.484966 7_2:-79434898 Msa1080150:CDS
TTGTCTTCATCGGCCATCCA+TGG 0.488246 7_2:+79436689 None:intergenic
ACAAAAGAAAATCAAAGGAG+TGG 0.488685 7_2:+79433307 None:intergenic
CTACGATGTTGTCGTCTGGT+AGG 0.491431 7_2:-79439781 Msa1080150:exon
CACAACATTTGGTCAAATGT+TGG 0.491776 7_2:+79433126 None:intergenic
GAAACGTTCGTGAAGTGGAT+TGG 0.495770 7_2:+79439834 None:intergenic
TGAATCCCAAATATTTAGAA+AGG 0.497212 7_2:-79437956 Msa1080150:CDS
GAAACAGGAACTGAAGCAAC+TGG 0.498254 7_2:+79434640 None:intergenic
AGATGACTGGATTGCTGGCA+AGG 0.501201 7_2:-79434308 Msa1080150:CDS
AAAGATGCCTCATACTTGAA+TGG 0.503245 7_2:+79438129 None:intergenic
ACAGCAGCTGGGTTCTTCAC+AGG 0.503314 7_2:-79435208 Msa1080150:CDS
CGTATTGTTACTGGCACTGT+TGG 0.506761 7_2:+79435444 None:intergenic
CGGGAGTCAATTGGACACTA+TGG 0.507853 7_2:-79434221 Msa1080150:CDS
GCTGAAACCATTTCTTTGCC+CGG 0.508129 7_2:+79436895 None:intergenic
AAAGAAGTTGCTAAAGATAA+CGG 0.508160 7_2:+79435249 None:intergenic
AACTGAAGCAACTGGTAAAG+AGG 0.508176 7_2:+79434648 None:intergenic
CTAAATATTTGGGATTCACA+TGG 0.508383 7_2:+79437961 None:intergenic
GTTAAGCCAGAAGCTTATCA+AGG 0.511104 7_2:-79433837 Msa1080150:three_prime_UTR
AAGGGACGAGTGGATGTTCA+AGG 0.514503 7_2:-79434128 Msa1080150:CDS
GCCAAATTGAATATGAAGCC+AGG 0.515735 7_2:-79435659 Msa1080150:intron
TCATATTCAATTTGGCACTT+GGG 0.516765 7_2:+79435666 None:intergenic
GGCTTAAACCCTATTTGAGA+TGG 0.516828 7_2:+79435018 None:intergenic
ACCGCCAATGAGCCTACTTC+CGG 0.517406 7_2:+79436934 None:intergenic
ATCATGGGAGTTGCAGAAGC+AGG 0.518761 7_2:-79435690 Msa1080150:CDS
CAAGTTACCAACCTGAACAT+TGG 0.518895 7_2:+79435302 None:intergenic
ATTTGAAGATGTATACTGTC+AGG 0.519071 7_2:-79434152 Msa1080150:CDS
AGTAAAATCTTCCAGAATTG+AGG 0.520874 7_2:-79434605 Msa1080150:CDS
GGAGTATTTGATGATATGGC+TGG 0.521125 7_2:-79437257 Msa1080150:CDS
TTAACACCTATGGGGATACC+GGG 0.521435 7_2:-79433571 Msa1080150:three_prime_UTR
CAAAAGAAAATCAAAGGAGT+GGG 0.522899 7_2:+79433308 None:intergenic
GATCGCATCACCGTCTCACT+TGG 0.525025 7_2:+79434703 None:intergenic
GAAATTAATGTGGTCGGGGA+AGG 0.526098 7_2:+79434979 None:intergenic
CCACATCATTGCGGTGATTG+TGG 0.527976 7_2:-79434442 Msa1080150:CDS
AGAACCGGAAGTAGGCTCAT+TGG 0.529221 7_2:-79436938 Msa1080150:CDS
CACACAATACACACAAGCAT+TGG 0.529437 7_2:+79434182 None:intergenic
AACGACAACAACCTACCTCT+GGG 0.529457 7_2:-79439808 Msa1080150:five_prime_UTR
GCCAAATTACGCATCGAAGG+AGG 0.530494 7_2:+79435417 None:intergenic
ATTGGAACGAATGGCAGGCA+CGG 0.530926 7_2:+79435320 None:intergenic
CCCGAAGAAATTAATGTGGT+CGG 0.531341 7_2:+79434973 None:intergenic
CCACTCTTCACAGATGGAGC+TGG 0.531578 7_2:+79435090 None:intergenic
GCTTACCAAATTGTCTTCAT+CGG 0.532183 7_2:+79436679 None:intergenic
ATTCAAGGTATTCTTATTGG+CGG 0.532457 7_2:+79434801 None:intergenic
ATTTGGATGCACATAGCATA+AGG 0.533715 7_2:-79436829 Msa1080150:CDS
ACTGCTTAGGAAAGCAGCTA+AGG 0.533771 7_2:+79433755 None:intergenic
TTATTGGCGGTATTTGAGCT+CGG 0.534346 7_2:+79434814 None:intergenic
GCGAAAGGTTTGATATCCGC+AGG 0.535645 7_2:-79434748 Msa1080150:CDS
CAAGCATCTAGCATGAATGA+TGG 0.535680 7_2:+79434054 None:intergenic
GGTATGCAACATCAGATGAC+TGG 0.539121 7_2:-79434321 Msa1080150:CDS
ACCACCGCCGCATCAAGAGC+TGG 0.540585 7_2:-79439699 Msa1080150:CDS
ACAGCAGCAATTTGATTCTG+AGG 0.540664 7_2:-79435514 Msa1080150:CDS
AACACCTATGGGGATACCGG+GGG 0.542948 7_2:-79433569 Msa1080150:three_prime_UTR
TTAAGCTCGTTAGTTGCGAA+AGG 0.545105 7_2:-79434763 Msa1080150:CDS
TTCACATGGATGCTATGAGA+TGG 0.547527 7_2:+79437975 None:intergenic
AATAATTCTTCGATTACATG+TGG 0.547916 7_2:+79434475 None:intergenic
TGTCTTCATCGGCCATCCAT+GGG 0.548954 7_2:+79436690 None:intergenic
ATTATATCCATCGTCTCCAT+AGG 0.554348 7_2:+79436997 None:intergenic
CAAGGTCATCTTCATCCAAA+CGG 0.554505 7_2:-79433376 Msa1080150:three_prime_UTR
TGAACATTGGAACGAATGGC+AGG 0.555403 7_2:+79435315 None:intergenic
AATAATCAGCATACTCATAG+AGG 0.555522 7_2:-79437061 Msa1080150:CDS
AGATGTATACTGTCAGGAAA+GGG 0.555729 7_2:-79434146 Msa1080150:CDS
GACATTCCTATTGTTGTATG+CGG 0.557470 7_2:+79435548 None:intergenic
AAGGTGAAGACTGTTCTGAA+GGG 0.558749 7_2:+79435481 None:intergenic
AACCTGAACATTGGAACGAA+TGG 0.559123 7_2:+79435311 None:intergenic
AAAGGTGAAGACTGTTCTGA+AGG 0.560794 7_2:+79435480 None:intergenic
CAGCAGCAATTTGATTCTGA+GGG 0.562116 7_2:-79435513 Msa1080150:CDS
TATGATGATAATAAAACAGA+CGG 0.562220 7_2:-79434241 Msa1080150:CDS
CCAAATTACGCATCGAAGGA+GGG 0.563230 7_2:+79435418 None:intergenic
ATGATTCCACTCTTCACAGA+TGG 0.563534 7_2:+79435084 None:intergenic
TTGGAACGAATGGCAGGCAC+GGG 0.563880 7_2:+79435321 None:intergenic
TGATGCACCACGATTGTTGG+AGG 0.564054 7_2:+79434840 None:intergenic
TGATTGTAGCATCAAGAAGA+TGG 0.565765 7_2:-79434342 Msa1080150:CDS
TGCCTCATACTTGAATGGAC+AGG 0.566930 7_2:+79438134 None:intergenic
GTTGCTACGATGTTGTCGTC+TGG 0.567550 7_2:-79439785 Msa1080150:exon
CACACACCCAATTGGAACAA+AGG 0.567583 7_2:-79435774 Msa1080150:CDS
TATTGTTAAGAATATTGGGC+GGG 0.568077 7_2:-79438537 Msa1080150:CDS
CCACAATCACCGCAATGATG+TGG 0.571121 7_2:+79434442 None:intergenic
CGAAGAAATTAATGTGGTCG+GGG 0.572323 7_2:+79434975 None:intergenic
ATTCGTTCCAATGTTCAGGT+TGG 0.573224 7_2:-79435309 Msa1080150:CDS
GTCACCAGCTCTTGATGCGG+CGG 0.573740 7_2:+79439695 None:intergenic
CGAGATGGAAAGTAGAAATG+TGG 0.573826 7_2:-79434080 Msa1080150:CDS
GCATCCAAATTCACAGACTT+CGG 0.574943 7_2:+79436842 None:intergenic
TTGTCAGATAACTCAATACT+TGG 0.575179 7_2:-79434034 Msa1080150:CDS
TGAGGCAGATGATGCTGCAA+AGG 0.575199 7_2:-79434587 Msa1080150:CDS
AGACTGAGAATCACTTCTAA+GGG 0.576385 7_2:+79438004 None:intergenic
TCACATGGATGCTATGAGAT+GGG 0.576495 7_2:+79437976 None:intergenic
CTTGCGAAAATCACAAGAGA+AGG 0.578295 7_2:-79435283 Msa1080150:CDS
CACAATCACCGCAATGATGT+GGG 0.578357 7_2:+79434443 None:intergenic
AAAGGAGCTTTAGATTTGAG+TGG 0.579334 7_2:+79435159 None:intergenic
ACCGGAAGTAGGCTCATTGG+CGG 0.579906 7_2:-79436935 Msa1080150:CDS
GAAAGTAGTGATGGTGGCGG+TGG 0.581623 7_2:-79439734 Msa1080150:CDS
AAGCATCTAGCATGAATGAT+GGG 0.581668 7_2:+79434055 None:intergenic
AAGATGTATACTGTCAGGAA+AGG 0.582076 7_2:-79434147 Msa1080150:CDS
GAACCCAGCTGCTGTTGCTG+AGG 0.583698 7_2:+79435216 None:intergenic
GAAGGCTGGAAAGAAGCAAA+AGG 0.584037 7_2:-79434884 Msa1080150:CDS
GGAGAACCTAGTGACGCGGC+GGG 0.584551 7_2:+79434946 None:intergenic
TGGTAGTTGTTTCTTAACAG+TGG 0.585131 7_2:+79435736 None:intergenic
GAGATGGAAAGTAGAAATGT+GGG 0.585552 7_2:-79434079 Msa1080150:CDS
TGTTTGTGGTAACATTCTTG+AGG 0.586608 7_2:-79439561 Msa1080150:intron
ATGTGGGATGAGGTGAACCC+TGG 0.587853 7_2:-79436758 Msa1080150:CDS
AGAACAGTTTAATAGACACT+TGG 0.587882 7_2:-79434401 Msa1080150:CDS
GGCGGAGCCTATGGAGACGA+TGG 0.591159 7_2:-79437004 Msa1080150:CDS
ATTTGACAAAAGAAAATCAA+AGG 0.591890 7_2:+79433302 None:intergenic
GTGTTGGAAGAACCGGAAGT+AGG 0.595103 7_2:-79436946 Msa1080150:CDS
AATCTACACATTCTTTGGGA+GGG 0.595704 7_2:-79433282 Msa1080150:three_prime_UTR
CATACATGCATGTTAAGCCT+AGG 0.595796 7_2:+79437162 None:intergenic
TCAATTATCTGAAGAGTCTG+AGG 0.595989 7_2:+79438080 None:intergenic
AAATCTACACATTCTTTGGG+AGG 0.596307 7_2:-79433283 Msa1080150:three_prime_UTR
GACTCTTCAGATAATTGAGA+AGG 0.596715 7_2:-79438075 Msa1080150:CDS
CGACCACATTAATTTCTTCG+GGG 0.597538 7_2:-79434972 Msa1080150:CDS
TTCTTTCCAGCCTTCCCTTG+CGG 0.598633 7_2:+79434892 None:intergenic
AAATAGGGTTTAAGCCTACT+CGG 0.599873 7_2:-79435011 Msa1080150:CDS
CCAGCTCCATCTGTGAAGAG+TGG 0.601958 7_2:-79435090 Msa1080150:CDS
GATGAATGCCTCCCAGATGA+TGG 0.602988 7_2:+79435716 None:intergenic
GAAGCTGAACCATTGACCGC+GGG 0.604224 7_2:+79438038 None:intergenic
GGTACATTATCAGACAAACC+AGG 0.604517 7_2:+79436740 None:intergenic
TAGGAAAGCAGCTAAGGCAA+TGG 0.605790 7_2:+79433761 None:intergenic
AGAAACAACTACCATCATCT+GGG 0.605841 7_2:-79435727 Msa1080150:CDS
ATTCTGCAATACATACAGAC+AGG 0.606020 7_2:-79438165 Msa1080150:CDS
ACAACTTGAGCTCAGACCCA+TGG 0.607186 7_2:-79436706 Msa1080150:CDS
TTGTAGCTCATCGTCAATCG+AGG 0.609529 7_2:+79439864 None:intergenic
CTCTGCCAAAACTACCGCAA+GGG 0.611035 7_2:-79434906 Msa1080150:CDS
GCCAAAACTACCGCAAGGGA+AGG 0.612070 7_2:-79434902 Msa1080150:CDS
GAGGCATTCATCATTATCAT+GGG 0.613363 7_2:-79435705 Msa1080150:CDS
TCTGTTCCTGAAAAGAGCAT+CGG 0.616052 7_2:-79437025 Msa1080150:CDS
ATGATGATAATAAAACAGAC+GGG 0.617056 7_2:-79434240 Msa1080150:CDS
CGGAGGAAGAGGAGTTCATG+TGG 0.617778 7_2:-79436775 Msa1080150:CDS
AAAACATCTCAACATTTGGG+TGG 0.617967 7_2:-79435369 Msa1080150:CDS
AAAGAAAATCAAAGGAGTGG+GGG 0.618293 7_2:+79433310 None:intergenic
GAAGCTTATCAAGGGTACCC+AGG 0.619064 7_2:-79433828 Msa1080150:three_prime_UTR
ACTCTGCCAAAACTACCGCA+AGG 0.619475 7_2:-79434907 Msa1080150:CDS
AACTACAGTGCCAAGTGAGA+CGG 0.621357 7_2:-79434713 Msa1080150:CDS
AGGTGAAGACTGTTCTGAAG+GGG 0.621418 7_2:+79435482 None:intergenic
AAACCTCAGCAACAGCAGCT+GGG 0.621875 7_2:-79435219 Msa1080150:CDS
TTTAAGCCTACTCGGTCAGG+TGG 0.622249 7_2:-79435003 Msa1080150:CDS
AGAGCTGGTGACTCAGTACA+AGG 0.624110 7_2:-79439684 Msa1080150:CDS
GACTCTGAAAGTAGTGATGG+TGG 0.625930 7_2:-79439740 Msa1080150:CDS
GTTGGAGACTGTTGTCGCAA+AGG 0.627501 7_2:+79435462 None:intergenic
GATGCGGCGGTGGTTGAGGG+TGG 0.627658 7_2:+79439708 None:intergenic
TGCTGGAGAGAATCTTTCTG+CGG 0.629304 7_2:-79439603 Msa1080150:CDS
AGTTTAATAGACACTTGGAA+TGG 0.631756 7_2:-79434396 Msa1080150:CDS
TTAAGCCAGAAGCTTATCAA+GGG 0.633280 7_2:-79433836 Msa1080150:three_prime_UTR
GTTCCTGAAAAGAGCATCGG+CGG 0.634573 7_2:-79437022 Msa1080150:CDS
GTGTTGCAGAGACCTTATCC+GGG 0.636826 7_2:-79436913 Msa1080150:CDS
CTTGAGCTCAGACCCATGGA+TGG 0.637419 7_2:-79436702 Msa1080150:CDS
AAAAGAAAATCAAAGGAGTG+GGG 0.638637 7_2:+79433309 None:intergenic
ATAATTCTTCGATTACATGT+GGG 0.641758 7_2:+79434476 None:intergenic
ATTATCTGAAGAGTCTGAGG+AGG 0.642000 7_2:+79438083 None:intergenic
TTAGATAGATCGAGAAGACC+AGG 0.642655 7_2:-79439896 Msa1080150:five_prime_UTR
TCAGCCAAATTACGCATCGA+AGG 0.643348 7_2:+79435414 None:intergenic
AATTAAGGAAAGCAATACAC+GGG 0.646592 7_2:+79433224 None:intergenic
AGGGACGAGTGGATGTTCAA+GGG 0.647699 7_2:-79434127 Msa1080150:CDS
ATCGTAGCAACCCCAGAGGT+AGG 0.650618 7_2:+79439797 None:intergenic
TGATTGAGACAAGGCAAGCG+AGG 0.653277 7_2:+79434564 None:intergenic
GAAGGACCACCTGACCGAGT+AGG 0.653335 7_2:+79434997 None:intergenic
GAGGTAGGTTGTTGTCGTTG+AGG 0.655687 7_2:+79439812 None:intergenic
TTAGTATGCAACGAGAACCT+GGG 0.656890 7_2:+79433811 None:intergenic
ATAGACTCTGAAAGTAGTGA+TGG 0.658285 7_2:-79439743 Msa1080150:CDS
TTGCATATTTAACACCTATG+GGG 0.659037 7_2:-79433579 Msa1080150:three_prime_UTR
TGTGCTAGTTGATTGAGACA+AGG 0.659929 7_2:+79434555 None:intergenic
GAACAATCCAGATAGCGAGA+TGG 0.661154 7_2:-79434095 Msa1080150:CDS
ACTGTCAGGAAAGGGACGAG+TGG 0.661605 7_2:-79434138 Msa1080150:CDS
AAATTAAGGAAAGCAATACA+CGG 0.662373 7_2:+79433223 None:intergenic
TCTACTTCCTCCAACAATCG+TGG 0.664631 7_2:-79434847 Msa1080150:CDS
GGAGGAAGAGGAGTTCATGT+GGG 0.666115 7_2:-79436774 Msa1080150:CDS
CTGTCTAAGAGATAAAGCGA+AGG 0.669079 7_2:+79438560 None:intergenic
AATCACAAGAGAAGGATATG+CGG 0.670294 7_2:-79435275 Msa1080150:CDS
ATGCAAATGAAGACGCAGAG+AGG 0.671037 7_2:-79437223 Msa1080150:CDS
AGTTGCTGACTCTGTTCCTG+CGG 0.676828 7_2:+79434732 None:intergenic
AGCAGCAATTTGATTCTGAG+GGG 0.679911 7_2:-79435512 Msa1080150:CDS
CTTTGCTGTCAGACTACCTG+AGG 0.680366 7_2:-79438501 Msa1080150:intron
ACGTCTTCAGCAGTCCAGCA+GGG 0.683190 7_2:-79437931 Msa1080150:intron
GTATTGTTAAGAATATTGGG+CGG 0.684810 7_2:-79438538 Msa1080150:CDS
GTACATTATCAGACAAACCA+GGG 0.685272 7_2:+79436741 None:intergenic
AGAAGCTGAACCATTGACCG+CGG 0.688294 7_2:+79438037 None:intergenic
TGGAGAACCTAGTGACGCGG+CGG 0.688959 7_2:+79434945 None:intergenic
GATGAACTCCCACATCATTG+CGG 0.690002 7_2:-79434451 Msa1080150:CDS
TGAGTCACCAGCTCTTGATG+CGG 0.698871 7_2:+79439692 None:intergenic
TTAAGCCTAGGATCCAGCCA+TGG 0.699790 7_2:+79437174 None:intergenic
GGAACTCAACTTCAATCCCG+CGG 0.701859 7_2:-79438054 Msa1080150:CDS
AGACCCCGAAGAAATTAATG+TGG 0.705849 7_2:+79434969 None:intergenic
AGATGGAAAGTAGAAATGTG+GGG 0.706843 7_2:-79434078 Msa1080150:CDS
GGTCATCTTCATCCAAACGG+CGG 0.713284 7_2:-79433373 Msa1080150:three_prime_UTR
CAATGCTTGTGTGTATTGTG+TGG 0.715495 7_2:-79434181 Msa1080150:CDS
TCACAAGAGAAGGATATGCG+GGG 0.724395 7_2:-79435273 Msa1080150:CDS
TCTGAAAGTAGTGATGGTGG+CGG 0.725899 7_2:-79439737 Msa1080150:CDS
ATTGACGATGAGCTACAACA+AGG 0.730213 7_2:-79439859 Msa1080150:five_prime_UTR
ATTTGGAGAACCTAGTGACG+CGG 0.733407 7_2:+79434942 None:intergenic
AACAACTACCATCATCTGGG+AGG 0.735086 7_2:-79435724 Msa1080150:CDS
ACGACAACAACCTACCTCTG+GGG 0.737955 7_2:-79439807 Msa1080150:five_prime_UTR
CAACATCGTAGCAACCCCAG+AGG 0.765435 7_2:+79439793 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTATTTGATGAAAT+TGG - chr7_2:79435186-79435205 Msa1080150:CDS 10.0%
!! TTATTAGTAATTTCATTAAT+TGG + chr7_2:79437078-79437097 None:intergenic 10.0%
! CCCCCCCCCCCCCCCCCCCC+CGG + chr7_2:79439481-79439500 None:intergenic 100.0%
! CCGGGGGGGGGGGGGGGGGG+GGG - chr7_2:79439479-79439498 Msa1080150:intron 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG - chr7_2:79439480-79439499 Msa1080150:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr7_2:79439481-79439500 Msa1080150:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr7_2:79439481-79439500 Msa1080150:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr7_2:79439481-79439500 Msa1080150:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr7_2:79439481-79439500 Msa1080150:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr7_2:79439481-79439500 Msa1080150:intron 100.0%
!! ATAGTCAAATTAGTAATTAT+CGG + chr7_2:79433406-79433425 None:intergenic 15.0%
!!! ATTGTAATTGATTTTGAATT+TGG - chr7_2:79433559-79433578 Msa1080150:intron 15.0%
!! TTCAAAAAGAATAAATTTCT+AGG - chr7_2:79433878-79433897 Msa1080150:exon 15.0%
!! GAAAAAAGAAAAACATATTT+AGG - chr7_2:79433924-79433943 Msa1080150:intron 15.0%
!!! CATATTTTAGATATCAAAAA+AGG - chr7_2:79435512-79435531 Msa1080150:CDS 15.0%
!!! TATAACTTGTCAAATTTTAA+AGG + chr7_2:79435662-79435681 None:intergenic 15.0%
!!! GTTATCATATTTTAATAGAA+TGG - chr7_2:79435936-79435955 Msa1080150:intron 15.0%
!!! TTTTTTAAGTCAACAAAATT+AGG + chr7_2:79436964-79436983 None:intergenic 15.0%
!!! TTGATAACTTTATTTTATGA+TGG - chr7_2:79439417-79439436 Msa1080150:intron 15.0%
!!! TGTTTTGTTTGTATCATTTA+TGG - chr7_2:79433518-79433537 Msa1080150:intron 20.0%
!!! ATAAATTTCTAGGTTTTATG+CGG - chr7_2:79433888-79433907 Msa1080150:intron 20.0%
!!! TTTTTTGTGTCATTATGAAA+AGG - chr7_2:79433947-79433966 Msa1080150:intron 20.0%
!!! TTTTTGTGTCATTATGAAAA+GGG - chr7_2:79433948-79433967 Msa1080150:intron 20.0%
!! ACGATGAATTAATATTAGAT+AGG - chr7_2:79433991-79434010 Msa1080150:intron 20.0%
!! ACAGTATTGTTAAGAATATT+GGG - chr7_2:79434491-79434510 Msa1080150:CDS 20.0%
!! TGAAATGTTTAGATTTGATT+TGG - chr7_2:79434680-79434699 Msa1080150:CDS 20.0%
!!! GTTAGATGATTCATTTTTTA+TGG + chr7_2:79434740-79434759 None:intergenic 20.0%
!! TGAAAAATTCCATTTATTGA+CGG + chr7_2:79434762-79434781 None:intergenic 20.0%
!! TAAAATTAGAAAATACTCGA+AGG + chr7_2:79434796-79434815 None:intergenic 20.0%
!! TTAAGTCTGTAAAGATTATT+AGG + chr7_2:79435444-79435463 None:intergenic 20.0%
!! TTTGTAAATTTCTAACTTGA+AGG + chr7_2:79436509-79436528 None:intergenic 20.0%
!! AATTATGTCTTAGGTTTATT+AGG + chr7_2:79437009-79437028 None:intergenic 20.0%
!! AAATTAGGAAATTATGTCTT+AGG + chr7_2:79437018-79437037 None:intergenic 20.0%
!! CATAATTTCCTAATTTAACT+TGG - chr7_2:79437022-79437041 Msa1080150:CDS 20.0%
!! TATGATGATAATAAAACAGA+CGG - chr7_2:79438791-79438810 Msa1080150:intron 20.0%
!!! TTAGTCTATTTGAATTTTGA+AGG - chr7_2:79439088-79439107 Msa1080150:intron 20.0%
!! ACAACAAAAAGAAACAAAAA+GGG + chr7_2:79439318-79439337 None:intergenic 20.0%
!! TACAACAAAAAGAAACAAAA+AGG + chr7_2:79439319-79439338 None:intergenic 20.0%
!! ATTTGACAAAAGAAAATCAA+AGG + chr7_2:79439593-79439612 None:intergenic 20.0%
!! ATTTGACAAAAGAAAATCAA+AGG + chr7_2:79439593-79439612 None:intergenic 20.0%
! ACTAATTTGACTATAATTGC+TGG - chr7_2:79433412-79433431 Msa1080150:intron 25.0%
! ACAAAACAAGAACAATTTCT+CGG + chr7_2:79433506-79433525 None:intergenic 25.0%
!!! AGAAGTTTTATCATGGAAAA+TGG - chr7_2:79433668-79433687 Msa1080150:three_prime_UTR 25.0%
!! TTCATCCATTTTATAGTTGT+TGG - chr7_2:79433723-79433742 Msa1080150:three_prime_UTR 25.0%
! CATTATGAAAAGGGAAAAAA+AGG - chr7_2:79433957-79433976 Msa1080150:intron 25.0%
!!! TCAGTTTATTTTCTCGAATA+GGG - chr7_2:79434240-79434259 Msa1080150:CDS 25.0%
! TTGATGCTAAGTTATAACAT+AGG - chr7_2:79434286-79434305 Msa1080150:CDS 25.0%
! TGATGCTAAGTTATAACATA+GGG - chr7_2:79434287-79434306 Msa1080150:CDS 25.0%
! ACAAATGTAAACAAGGATTA+AGG + chr7_2:79434341-79434360 None:intergenic 25.0%
!! TAATCCTTGTTTACATTTGT+TGG - chr7_2:79434341-79434360 Msa1080150:CDS 25.0%
!! AATCCTTGTTTACATTTGTT+GGG - chr7_2:79434342-79434361 Msa1080150:CDS 25.0%
!!! TTGTCGATTTGTTATAAGAA+AGG - chr7_2:79434393-79434412 Msa1080150:CDS 25.0%
!!! TGTCGATTTGTTATAAGAAA+GGG - chr7_2:79434394-79434413 Msa1080150:CDS 25.0%
! AATTATGTTAATGACTTTCC+AGG - chr7_2:79434429-79434448 Msa1080150:CDS 25.0%
! GACAGTATTGTTAAGAATAT+TGG - chr7_2:79434490-79434509 Msa1080150:CDS 25.0%
!!! TTAGATTTGATTTGGTTACA+TGG - chr7_2:79434688-79434707 Msa1080150:CDS 25.0%
!!! TTATACACGCATTTTTAACT+AGG - chr7_2:79434813-79434832 Msa1080150:CDS 25.0%
! CTAAAATGTAAAGGAGTAAT+TGG + chr7_2:79434845-79434864 None:intergenic 25.0%
!! CAATTACTCCTTTACATTTT+AGG - chr7_2:79434843-79434862 Msa1080150:CDS 25.0%
! TGAATCCCAAATATTTAGAA+AGG - chr7_2:79435076-79435095 Msa1080150:CDS 25.0%
! TATGTAATCTGTTGCATTAA+AGG + chr7_2:79435152-79435171 None:intergenic 25.0%
!!! ATTTTTGGCCTACTATATTA+TGG - chr7_2:79435376-79435395 Msa1080150:CDS 25.0%
!!! TTTTTGGCCTACTATATTAT+GGG - chr7_2:79435377-79435396 Msa1080150:CDS 25.0%
! TTTGTTCATAGTATGACATA+TGG - chr7_2:79435410-79435429 Msa1080150:CDS 25.0%
!! TGATAATTTAAAGGCATAGA+GGG + chr7_2:79435583-79435602 None:intergenic 25.0%
!!! GTTGATTCGTGATAATTTAA+AGG + chr7_2:79435592-79435611 None:intergenic 25.0%
!!! TCAAATTTTAAAGGCATAGA+GGG + chr7_2:79435653-79435672 None:intergenic 25.0%
! AAGAATTAAGTACCAGATTA+GGG + chr7_2:79435720-79435739 None:intergenic 25.0%
! AAAGAATTAAGTACCAGATT+AGG + chr7_2:79435721-79435740 None:intergenic 25.0%
!!! TAAAGGAGTATTTGATGATA+TGG - chr7_2:79435771-79435790 Msa1080150:CDS 25.0%
! ACAGATTGAATAGTATAAAG+AGG + chr7_2:79435914-79435933 None:intergenic 25.0%
! TTCTAGTGTTTCAAATAGTT+TGG - chr7_2:79436057-79436076 Msa1080150:intron 25.0%
! TCTAGTGTTTCAAATAGTTT+GGG - chr7_2:79436058-79436077 Msa1080150:intron 25.0%
! GATTTGAAAAACTATGTTTG+AGG + chr7_2:79436162-79436181 None:intergenic 25.0%
! TAATTGGGAAAAAACTGAAT+TGG + chr7_2:79436426-79436445 None:intergenic 25.0%
!! TTTTTCCCAATTATGAAATG+AGG - chr7_2:79436433-79436452 Msa1080150:intron 25.0%
!! GATTGATTCTTCCAATTAAT+CGG + chr7_2:79436701-79436720 None:intergenic 25.0%
!!! ATGTCATCATATTTCAAGTT+GGG + chr7_2:79436724-79436743 None:intergenic 25.0%
! AAGTAAATGTCTATCACAAT+AGG - chr7_2:79436796-79436815 Msa1080150:CDS 25.0%
! AGTAAATGTCTATCACAATA+GGG - chr7_2:79436797-79436816 Msa1080150:CDS 25.0%
!! AGCAACAAAATTTTTGTATC+AGG - chr7_2:79436838-79436857 Msa1080150:CDS 25.0%
! ATCTTATGCCAAGTTAAATT+AGG + chr7_2:79437033-79437052 None:intergenic 25.0%
! TATTAACCTTTGTTCCAATT+GGG + chr7_2:79437267-79437286 None:intergenic 25.0%
! TTATTAACCTTTGTTCCAAT+TGG + chr7_2:79437268-79437287 None:intergenic 25.0%
! ATTGGAACAAAGGTTAATAA+AGG - chr7_2:79437268-79437287 Msa1080150:intron 25.0%
! TCTTAAAACATCTCAACATT+TGG - chr7_2:79437659-79437678 Msa1080150:intron 25.0%
! CTTAAAACATCTCAACATTT+GGG - chr7_2:79437660-79437679 Msa1080150:intron 25.0%
! AAAGAAGTTGCTAAAGATAA+CGG + chr7_2:79437786-79437805 None:intergenic 25.0%
!! CTTCTCGTAATTGATTTATT+GGG + chr7_2:79437975-79437994 None:intergenic 25.0%
!! ACTTCTCGTAATTGATTTAT+TGG + chr7_2:79437976-79437995 None:intergenic 25.0%
!! AAGATTTGAAATTGGATTCA+AGG + chr7_2:79438249-79438268 None:intergenic 25.0%
!! GAGCTTAAAAGATTTGAAAT+TGG + chr7_2:79438257-79438276 None:intergenic 25.0%
! ACAGAAATTAGAAATCTCAT+TGG - chr7_2:79438497-79438516 Msa1080150:intron 25.0%
! ATAATTCTTCGATTACATGT+GGG + chr7_2:79438559-79438578 None:intergenic 25.0%
! AATAATTCTTCGATTACATG+TGG + chr7_2:79438560-79438579 None:intergenic 25.0%
! ACATGTAATCGAAGAATTAT+TGG - chr7_2:79438559-79438578 Msa1080150:CDS 25.0%
! ACAAAAGAAAGAGAACAAAA+TGG - chr7_2:79438665-79438684 Msa1080150:intron 25.0%
! ATGATGATAATAAAACAGAC+GGG - chr7_2:79438792-79438811 Msa1080150:intron 25.0%
! AAGACTCATAGTTAATTGAA+TGG - chr7_2:79439036-79439055 Msa1080150:intron 25.0%
!!! GTTCAAATTTTTGTACTGAT+TGG - chr7_2:79439114-79439133 Msa1080150:intron 25.0%
!! ATTCATAACTTGTATTGCAT+TGG - chr7_2:79439165-79439184 Msa1080150:intron 25.0%
!!! CAATGGTTTTAAATGTGAAA+AGG + chr7_2:79439257-79439276 None:intergenic 25.0%
!!! ACTTTATTTTATGATGGTGA+TGG - chr7_2:79439423-79439442 Msa1080150:intron 25.0%
!!! CTTTATTTTATGATGGTGAT+GGG - chr7_2:79439424-79439443 Msa1080150:intron 25.0%
!!! TTTATTTTATGATGGTGATG+GGG - chr7_2:79439425-79439444 Msa1080150:intron 25.0%
! ATTTGCATATTTAACACCTA+TGG - chr7_2:79439451-79439470 Msa1080150:intron 25.0%
! TTTGCATATTTAACACCTAT+GGG - chr7_2:79439452-79439471 Msa1080150:intron 25.0%
! AAATTAAGGAAAGCAATACA+CGG + chr7_2:79439812-79439831 None:intergenic 25.0%
! TTTATGCAGCTGATAAATTA+AGG + chr7_2:79439826-79439845 None:intergenic 25.0%
! TGCTTGTGCTATTGATAAAT+TGG - chr7_2:79433626-79433645 Msa1080150:three_prime_UTR 30.0%
! GCTTGTGCTATTGATAAATT+GGG - chr7_2:79433627-79433646 Msa1080150:three_prime_UTR 30.0%
TGAATGCTAGTTAGAAAAGA+AGG - chr7_2:79433691-79433710 Msa1080150:three_prime_UTR 30.0%
CGTTACCAACAACTATAAAA+TGG + chr7_2:79433731-79433750 None:intergenic 30.0%
TACAAATTCTACAAAAGACC+AGG + chr7_2:79434145-79434164 None:intergenic 30.0%
TTGTAGAATTTGTACGCAAT+AGG - chr7_2:79434151-79434170 Msa1080150:CDS 30.0%
TGTAGAATTTGTACGCAATA+GGG - chr7_2:79434152-79434171 Msa1080150:CDS 30.0%
!! GTCAGTTTATTTTCTCGAAT+AGG - chr7_2:79434239-79434258 Msa1080150:CDS 30.0%
! ATCCTTGTTTACATTTGTTG+GGG - chr7_2:79434343-79434362 Msa1080150:CDS 30.0%
GTATTGTTAAGAATATTGGG+CGG - chr7_2:79434494-79434513 Msa1080150:CDS 30.0%
TATTGTTAAGAATATTGGGC+GGG - chr7_2:79434495-79434514 Msa1080150:CDS 30.0%
TCTATCATCTTTCCTTCTAT+TGG - chr7_2:79434565-79434584 Msa1080150:CDS 30.0%
!!! TTCATTTTTTATGGCAATGC+CGG + chr7_2:79434731-79434750 None:intergenic 30.0%
ATCATCTAACCGTCAATAAA+TGG - chr7_2:79434750-79434769 Msa1080150:CDS 30.0%
GCAGAATACCTAAAATGTAA+AGG + chr7_2:79434854-79434873 None:intergenic 30.0%
! CTAAATATTTGGGATTCACA+TGG + chr7_2:79435074-79435093 None:intergenic 30.0%
CGTTGCCTTTCTAAATATTT+GGG + chr7_2:79435084-79435103 None:intergenic 30.0%
ACGTTGCCTTTCTAAATATT+TGG + chr7_2:79435085-79435104 None:intergenic 30.0%
GTGTTCCTTGAATAATGAAA+CGG - chr7_2:79435223-79435242 Msa1080150:CDS 30.0%
! CCTACTATATTATGGGTTTT+GGG - chr7_2:79435384-79435403 Msa1080150:CDS 30.0%
! CTACTATATTATGGGTTTTG+GGG - chr7_2:79435385-79435404 Msa1080150:CDS 30.0%
! GTGATAATTTAAAGGCATAG+AGG + chr7_2:79435584-79435603 None:intergenic 30.0%
!! GTCAAATTTTAAAGGCATAG+AGG + chr7_2:79435654-79435673 None:intergenic 30.0%
!! TTTTGTTTCATGCAGACTAA+AGG - chr7_2:79435754-79435773 Msa1080150:CDS 30.0%
AATAATCAGCATACTCATAG+AGG - chr7_2:79435971-79435990 Msa1080150:intron 30.0%
GTCAAAGAACTGGAAAAATT+CGG - chr7_2:79436237-79436256 Msa1080150:intron 30.0%
CTGAATTGGACAAACAAATT+GGG + chr7_2:79436412-79436431 None:intergenic 30.0%
ACTGAATTGGACAAACAAAT+TGG + chr7_2:79436413-79436432 None:intergenic 30.0%
AAGCACCTCATTTCATAATT+GGG + chr7_2:79436441-79436460 None:intergenic 30.0%
! AAAGCACCTCATTTCATAAT+TGG + chr7_2:79436442-79436461 None:intergenic 30.0%
CAAAACAAGGTAGATCAAAT+TGG + chr7_2:79436465-79436484 None:intergenic 30.0%
!!! GATCTACCTTGTTTTGTTTT+TGG - chr7_2:79436469-79436488 Msa1080150:intron 30.0%
CACATTCCAAAAACAAAACA+AGG + chr7_2:79436478-79436497 None:intergenic 30.0%
ATTTCTAACTTGAAGGACAA+GGG + chr7_2:79436502-79436521 None:intergenic 30.0%
AATTTCTAACTTGAAGGACA+AGG + chr7_2:79436503-79436522 None:intergenic 30.0%
ATTGCCATAAAATTACTTGC+AGG + chr7_2:79436544-79436563 None:intergenic 30.0%
! ATTTTTATCAAAACCAGCCA+GGG + chr7_2:79436586-79436605 None:intergenic 30.0%
!! CACAAATGAATTTTCAAGAC+AGG + chr7_2:79436670-79436689 None:intergenic 30.0%
!! TGTCATCATATTTCAAGTTG+GGG + chr7_2:79436723-79436742 None:intergenic 30.0%
! GATGTCATCATATTTCAAGT+TGG + chr7_2:79436725-79436744 None:intergenic 30.0%
AGTAAAGCAAACTAAAGAAG+AGG - chr7_2:79436747-79436766 Msa1080150:CDS 30.0%
GTAAAGCAAACTAAAGAAGA+GGG - chr7_2:79436748-79436767 Msa1080150:CDS 30.0%
AACATGACAAAATGCTTGAT+CGG - chr7_2:79436772-79436791 Msa1080150:CDS 30.0%
TAGGCATATTTATTATCCCA+CGG + chr7_2:79436945-79436964 None:intergenic 30.0%
CTGCATGCAAAAAACAAAAT+TGG + chr7_2:79437215-79437234 None:intergenic 30.0%
!!! CAATTTTGTTTTTTGCATGC+AGG - chr7_2:79437213-79437232 Msa1080150:CDS 30.0%
TCATATTCAATTTGGCACTT+GGG + chr7_2:79437369-79437388 None:intergenic 30.0%
TTCATATTCAATTTGGCACT+TGG + chr7_2:79437370-79437389 None:intergenic 30.0%
!! ATATTTGTTTCTGCTCCTAA+TGG - chr7_2:79437406-79437425 Msa1080150:intron 30.0%
CAATAGGAATGTCCAAATTA+CGG - chr7_2:79437494-79437513 Msa1080150:intron 30.0%
AATAGGAATGTCCAAATTAC+GGG - chr7_2:79437495-79437514 Msa1080150:intron 30.0%
!!! TGAGATGTTTTAAGAGATGT+TGG + chr7_2:79437654-79437673 None:intergenic 30.0%
TAAATCAATTACGAGAAGTC+TGG - chr7_2:79437977-79437996 Msa1080150:CDS 30.0%
AGAGTAGGTGAATAATCATT+TGG + chr7_2:79438110-79438129 None:intergenic 30.0%
! ATTCAAGGTATTCTTATTGG+CGG + chr7_2:79438234-79438253 None:intergenic 30.0%
! TGGATTCAAGGTATTCTTAT+TGG + chr7_2:79438237-79438256 None:intergenic 30.0%
!! CAATTCTGGAAGATTTTACT+GGG + chr7_2:79438427-79438446 None:intergenic 30.0%
!! TCAATTCTGGAAGATTTTAC+TGG + chr7_2:79438428-79438447 None:intergenic 30.0%
AGTAAAATCTTCCAGAATTG+AGG - chr7_2:79438427-79438446 Msa1080150:intron 30.0%
AGAACAGTTTAATAGACACT+TGG - chr7_2:79438631-79438650 Msa1080150:intron 30.0%
AGTTTAATAGACACTTGGAA+TGG - chr7_2:79438636-79438655 Msa1080150:intron 30.0%
ATTTGAAGATGTATACTGTC+AGG - chr7_2:79438880-79438899 Msa1080150:intron 30.0%
TTGTCAGATAACTCAATACT+TGG - chr7_2:79438998-79439017 Msa1080150:intron 30.0%
! CAAAATTTGTTTGACTGCTT+AGG + chr7_2:79439293-79439312 None:intergenic 30.0%
!! GTTTCTTTTTGTTGTACTTG+AGG - chr7_2:79439323-79439342 Msa1080150:intron 30.0%
TTGCATATTTAACACCTATG+GGG - chr7_2:79439453-79439472 Msa1080150:intron 30.0%
AAAAGAAAATCAAAGGAGTG+GGG + chr7_2:79439586-79439605 None:intergenic 30.0%
CAAAAGAAAATCAAAGGAGT+GGG + chr7_2:79439587-79439606 None:intergenic 30.0%
ACAAAAGAAAATCAAAGGAG+TGG + chr7_2:79439588-79439607 None:intergenic 30.0%
TGTCAAATCTACACATTCTT+TGG - chr7_2:79439605-79439624 Msa1080150:CDS 30.0%
GTCAAATCTACACATTCTTT+GGG - chr7_2:79439606-79439625 Msa1080150:CDS 30.0%
AAAAGAAAATCAAAGGAGTG+GGG + chr7_2:79439586-79439605 None:intergenic 30.0%
CAAAAGAAAATCAAAGGAGT+GGG + chr7_2:79439587-79439606 None:intergenic 30.0%
ACAAAAGAAAATCAAAGGAG+TGG + chr7_2:79439588-79439607 None:intergenic 30.0%
TGTCAAATCTACACATTCTT+TGG - chr7_2:79439605-79439624 Msa1080150:CDS 30.0%
GTCAAATCTACACATTCTTT+GGG - chr7_2:79439606-79439625 Msa1080150:CDS 30.0%
AATTAAGGAAAGCAATACAC+GGG + chr7_2:79439811-79439830 None:intergenic 30.0%
! ATAGACTCTGAAAGTAGTGA+TGG - chr7_2:79433289-79433308 Msa1080150:three_prime_UTR 35.0%
TGTTTGTGGTAACATTCTTG+AGG - chr7_2:79433471-79433490 Msa1080150:intron 35.0%
!! AATTGGGTTAGTGTTGTTCT+CGG - chr7_2:79433643-79433662 Msa1080150:three_prime_UTR 35.0%
!! TATAGTTGTTGGTAACGTCT+AGG - chr7_2:79433734-79433753 Msa1080150:three_prime_UTR 35.0%
!!! TTTCTTTTTTCTCGTGTGCA+TGG + chr7_2:79433915-79433934 None:intergenic 35.0%
TGCATTGCAATGATTCTGTT+AGG - chr7_2:79434030-79434049 Msa1080150:CDS 35.0%
AATTGCATATGGACTCCATT+AGG + chr7_2:79434083-79434102 None:intergenic 35.0%
GTCCATATGCAATTTACAAG+TGG - chr7_2:79434089-79434108 Msa1080150:CDS 35.0%
CAATAGGGACTAAGAATCTT+TGG - chr7_2:79434167-79434186 Msa1080150:CDS 35.0%
CAAATCGACAAACAAGCAAT+GGG + chr7_2:79434384-79434403 None:intergenic 35.0%
ACAAATCGACAAACAAGCAA+TGG + chr7_2:79434385-79434404 None:intergenic 35.0%
ATAGATAGATATCTGACCTC+AGG + chr7_2:79434550-79434569 None:intergenic 35.0%
AAGGAAGTAATGCCAATAGA+AGG + chr7_2:79434580-79434599 None:intergenic 35.0%
! GGATGATAATGCAATAGTTC+CGG - chr7_2:79434709-79434728 Msa1080150:CDS 35.0%
ATTCTGCAATACATACAGAC+AGG - chr7_2:79434867-79434886 Msa1080150:CDS 35.0%
AAAGATGCCTCATACTTGAA+TGG + chr7_2:79434906-79434925 None:intergenic 35.0%
!! TCAAGTATGAGGCATCTTTT+TGG - chr7_2:79434907-79434926 Msa1080150:CDS 35.0%
TCAATTATCTGAAGAGTCTG+AGG + chr7_2:79434955-79434974 None:intergenic 35.0%
GACTCTTCAGATAATTGAGA+AGG - chr7_2:79434957-79434976 Msa1080150:CDS 35.0%
AGACTGAGAATCACTTCTAA+GGG + chr7_2:79435031-79435050 None:intergenic 35.0%
TAACCAAGCTCAAAAGTTGA+TGG + chr7_2:79435269-79435288 None:intergenic 35.0%
! GCGTGAACTGTTCTAATTTT+TGG - chr7_2:79435361-79435380 Msa1080150:CDS 35.0%
! GCCTACTATATTATGGGTTT+TGG - chr7_2:79435383-79435402 Msa1080150:CDS 35.0%
CCCAAAACCCATAATATAGT+AGG + chr7_2:79435387-79435406 None:intergenic 35.0%
AGATATCAAAAAAGGCCTTC+CGG - chr7_2:79435520-79435539 Msa1080150:CDS 35.0%
ATTATATCCATCGTCTCCAT+AGG + chr7_2:79436038-79436057 None:intergenic 35.0%
! GTTTCAAATAGTTTGGGTTC+AGG - chr7_2:79436064-79436083 Msa1080150:intron 35.0%
ATTTGGATGCACATAGCATA+AGG - chr7_2:79436203-79436222 Msa1080150:intron 35.0%
AAAGAACTGGAAAAATTCGG+AGG - chr7_2:79436240-79436259 Msa1080150:intron 35.0%
GTACATTATCAGACAAACCA+GGG + chr7_2:79436294-79436313 None:intergenic 35.0%
! CTCAAGTTGTTAGAGACATT+AGG + chr7_2:79436316-79436335 None:intergenic 35.0%
GCTTACCAAATTGTCTTCAT+CGG + chr7_2:79436356-79436375 None:intergenic 35.0%
!! TGGTAAGCTTGCTACAATAA+AGG - chr7_2:79436368-79436387 Msa1080150:intron 35.0%
!! GGTAAGCTTGCTACAATAAA+GGG - chr7_2:79436369-79436388 Msa1080150:intron 35.0%
! GCATCCTGCAAGTAATTTTA+TGG - chr7_2:79436537-79436556 Msa1080150:intron 35.0%
! CATTTTTATCAAAACCAGCC+AGG + chr7_2:79436587-79436606 None:intergenic 35.0%
!!! AGAAATTGACTTGTCGCTTT+TGG - chr7_2:79436614-79436633 Msa1080150:intron 35.0%
AAATGTCTATCACAATAGGG+TGG - chr7_2:79436800-79436819 Msa1080150:CDS 35.0%
AATGTCTATCACAATAGGGT+GGG - chr7_2:79436801-79436820 Msa1080150:CDS 35.0%
!! TGGTAGTTGTTTCTTAACAG+TGG + chr7_2:79437299-79437318 None:intergenic 35.0%
AAGAAACAACTACCATCATC+TGG - chr7_2:79437304-79437323 Msa1080150:intron 35.0%
AGAAACAACTACCATCATCT+GGG - chr7_2:79437305-79437324 Msa1080150:intron 35.0%
! GAGGCATTCATCATTATCAT+GGG - chr7_2:79437327-79437346 Msa1080150:intron 35.0%
ACCTGGCTTCATATTCAATT+TGG + chr7_2:79437377-79437396 None:intergenic 35.0%
! ACAAATATTTCTGAGTGACC+TGG + chr7_2:79437394-79437413 None:intergenic 35.0%
GACATTCCTATTGTTGTATG+CGG + chr7_2:79437487-79437506 None:intergenic 35.0%
AAAACATCTCAACATTTGGG+TGG - chr7_2:79437663-79437682 Msa1080150:intron 35.0%
AATCACAAGAGAAGGATATG+CGG - chr7_2:79437757-79437776 Msa1080150:intron 35.0%
!! AAAGGAGCTTTAGATTTGAG+TGG + chr7_2:79437876-79437895 None:intergenic 35.0%
!!! TGACTTTTCTGAAGTCACTT+TGG + chr7_2:79437907-79437926 None:intergenic 35.0%
AGTAACTGTCCATCTCAAAT+AGG - chr7_2:79438005-79438024 Msa1080150:CDS 35.0%
GTAACTGTCCATCTCAAATA+GGG - chr7_2:79438006-79438025 Msa1080150:CDS 35.0%
AAATAGGGTTTAAGCCTACT+CGG - chr7_2:79438021-79438040 Msa1080150:CDS 35.0%
TGATTGTAGCATCAAGAAGA+TGG - chr7_2:79438690-79438709 Msa1080150:intron 35.0%
AAGATGTATACTGTCAGGAA+AGG - chr7_2:79438885-79438904 Msa1080150:intron 35.0%
AGATGTATACTGTCAGGAAA+GGG - chr7_2:79438886-79438905 Msa1080150:intron 35.0%
GAGATGGAAAGTAGAAATGT+GGG - chr7_2:79438953-79438972 Msa1080150:intron 35.0%
AGATGGAAAGTAGAAATGTG+GGG - chr7_2:79438954-79438973 Msa1080150:intron 35.0%
AAGCATCTAGCATGAATGAT+GGG + chr7_2:79438980-79438999 None:intergenic 35.0%
TTAAGCCAGAAGCTTATCAA+GGG - chr7_2:79439196-79439215 Msa1080150:intron 35.0%
CGTTGCATACTAAAACTAGA+TGG - chr7_2:79439231-79439250 Msa1080150:intron 35.0%
AAAGAAAATCAAAGGAGTGG+GGG + chr7_2:79439585-79439604 None:intergenic 35.0%
AAATCTACACATTCTTTGGG+AGG - chr7_2:79439609-79439628 Msa1080150:CDS 35.0%
! AATCTACACATTCTTTGGGA+GGG - chr7_2:79439610-79439629 Msa1080150:CDS 35.0%
AAAGAAAATCAAAGGAGTGG+GGG + chr7_2:79439585-79439604 None:intergenic 35.0%
AAATCTACACATTCTTTGGG+AGG - chr7_2:79439609-79439628 Msa1080150:CDS 35.0%
! AATCTACACATTCTTTGGGA+GGG - chr7_2:79439610-79439629 Msa1080150:CDS 35.0%
CACAACATTTGGTCAAATGT+TGG + chr7_2:79439909-79439928 None:intergenic 35.0%
TTAGATAGATCGAGAAGACC+AGG - chr7_2:79433136-79433155 Msa1080150:three_prime_UTR 40.0%
ATTGACGATGAGCTACAACA+AGG - chr7_2:79433173-79433192 Msa1080150:intron 40.0%
!! ATTGGGTTAGTGTTGTTCTC+GGG - chr7_2:79433644-79433663 Msa1080150:three_prime_UTR 40.0%
!! CTCGGGTAGAAGTTTTATCA+TGG - chr7_2:79433661-79433680 Msa1080150:three_prime_UTR 40.0%
!!! TAGGTTTTCTGAAACCCACT+TGG - chr7_2:79433753-79433772 Msa1080150:three_prime_UTR 40.0%
!!! AGGTTTTCTGAAACCCACTT+GGG - chr7_2:79433754-79433773 Msa1080150:three_prime_UTR 40.0%
CAATGATTCTGTTAGGTACC+AGG - chr7_2:79434037-79434056 Msa1080150:CDS 40.0%
ATTCTGTTAGGTACCAGGTT+TGG - chr7_2:79434042-79434061 Msa1080150:CDS 40.0%
TTCTGTTAGGTACCAGGTTT+GGG - chr7_2:79434043-79434062 Msa1080150:CDS 40.0%
TATGGACTCCATTAGGATAC+CGG + chr7_2:79434076-79434095 None:intergenic 40.0%
CGCCACTTGTAAATTGCATA+TGG + chr7_2:79434094-79434113 None:intergenic 40.0%
! ATAGGGCTGATGTCAACTTT+TGG - chr7_2:79434257-79434276 Msa1080150:CDS 40.0%
TGCCCCAACAAATGTAAACA+AGG + chr7_2:79434348-79434367 None:intergenic 40.0%
CTGTCTAAGAGATAAAGCGA+AGG + chr7_2:79434475-79434494 None:intergenic 40.0%
!!! TGAGGCATCTTTTTGGAACT+TGG - chr7_2:79434914-79434933 Msa1080150:CDS 40.0%
!!! CATCTTTTTGGAACTTGGAG+AGG - chr7_2:79434919-79434938 Msa1080150:CDS 40.0%
ATTATCTGAAGAGTCTGAGG+AGG + chr7_2:79434952-79434971 None:intergenic 40.0%
GAGACTGAGAATCACTTCTA+AGG + chr7_2:79435032-79435051 None:intergenic 40.0%
TCACATGGATGCTATGAGAT+GGG + chr7_2:79435059-79435078 None:intergenic 40.0%
TTCACATGGATGCTATGAGA+TGG + chr7_2:79435060-79435079 None:intergenic 40.0%
CAGCACCGTTTCATTATTCA+AGG + chr7_2:79435231-79435250 None:intergenic 40.0%
CTTGAATAATGAAACGGTGC+TGG - chr7_2:79435229-79435248 Msa1080150:CDS 40.0%
! TCGTGATAAGTACTGTGAAC+CGG + chr7_2:79435542-79435561 None:intergenic 40.0%
! TCCTTTTCTACACCCTAATC+TGG - chr7_2:79435705-79435724 Msa1080150:CDS 40.0%
ACCAGATTAGGGTGTAGAAA+AGG + chr7_2:79435709-79435728 None:intergenic 40.0%
! GGAGTATTTGATGATATGGC+TGG - chr7_2:79435775-79435794 Msa1080150:CDS 40.0%
CATACATGCATGTTAAGCCT+AGG + chr7_2:79435873-79435892 None:intergenic 40.0%
! TCTGTTCCTGAAAAGAGCAT+CGG - chr7_2:79436007-79436026 Msa1080150:intron 40.0%
! AATAGTTTGGGTTCAGGTGT+TGG - chr7_2:79436070-79436089 Msa1080150:intron 40.0%
GCATCCAAATTCACAGACTT+CGG + chr7_2:79436193-79436212 None:intergenic 40.0%
GGTACATTATCAGACAAACC+AGG + chr7_2:79436295-79436314 None:intergenic 40.0%
GTGTGTGAGTTCCGATTAAT+TGG - chr7_2:79436687-79436706 Msa1080150:CDS 40.0%
ATAGGGTGGGAAAGGATAAT+TGG - chr7_2:79436814-79436833 Msa1080150:CDS 40.0%
CGTTTCTATGCATCATTCCT+TGG + chr7_2:79436886-79436905 None:intergenic 40.0%
GAGTCATGCATAGATGTGAT+TGG + chr7_2:79436919-79436938 None:intergenic 40.0%
TGGTGTAATTGTAGAGTCCT+GGG + chr7_2:79437058-79437077 None:intergenic 40.0%
TTGGTGTAATTGTAGAGTCC+TGG + chr7_2:79437059-79437078 None:intergenic 40.0%
TTCCAATTGGGTGTGTGATT+TGG + chr7_2:79437255-79437274 None:intergenic 40.0%
!! GGAGGCATTCATCATTATCA+TGG - chr7_2:79437326-79437345 Msa1080150:intron 40.0%
GCCAAATTGAATATGAAGCC+AGG - chr7_2:79437373-79437392 Msa1080150:intron 40.0%
ACCCAAGCATTCAAACTCTT+CGG - chr7_2:79437432-79437451 Msa1080150:intron 40.0%
TCTATGCCGCATACAACAAT+AGG - chr7_2:79437478-79437497 Msa1080150:intron 40.0%
ACAGCAGCAATTTGATTCTG+AGG - chr7_2:79437518-79437537 Msa1080150:intron 40.0%
CAGCAGCAATTTGATTCTGA+GGG - chr7_2:79437519-79437538 Msa1080150:intron 40.0%
AGCAGCAATTTGATTCTGAG+GGG - chr7_2:79437520-79437539 Msa1080150:intron 40.0%
! AAGGTGAAGACTGTTCTGAA+GGG + chr7_2:79437554-79437573 None:intergenic 40.0%
AAAGGTGAAGACTGTTCTGA+AGG + chr7_2:79437555-79437574 None:intergenic 40.0%
AACCTGAACATTGGAACGAA+TGG + chr7_2:79437724-79437743 None:intergenic 40.0%
ATTCGTTCCAATGTTCAGGT+TGG - chr7_2:79437723-79437742 Msa1080150:intron 40.0%
CAAGTTACCAACCTGAACAT+TGG + chr7_2:79437733-79437752 None:intergenic 40.0%
CTTGCGAAAATCACAAGAGA+AGG - chr7_2:79437749-79437768 Msa1080150:intron 40.0%
ATCACAAGAGAAGGATATGC+GGG - chr7_2:79437758-79437777 Msa1080150:intron 40.0%
!! GTCACTTTGGCTTTGACTAA+AGG + chr7_2:79437894-79437913 None:intergenic 40.0%
ATGATTCCACTCTTCACAGA+TGG + chr7_2:79437951-79437970 None:intergenic 40.0%
GGCTTAAACCCTATTTGAGA+TGG + chr7_2:79438017-79438036 None:intergenic 40.0%
CGAAGAAATTAATGTGGTCG+GGG + chr7_2:79438060-79438079 None:intergenic 40.0%
CCGAAGAAATTAATGTGGTC+GGG + chr7_2:79438061-79438080 None:intergenic 40.0%
CCCGACCACATTAATTTCTT+CGG - chr7_2:79438058-79438077 Msa1080150:CDS 40.0%
CCCGAAGAAATTAATGTGGT+CGG + chr7_2:79438062-79438081 None:intergenic 40.0%
CCGACCACATTAATTTCTTC+GGG - chr7_2:79438059-79438078 Msa1080150:CDS 40.0%
CGACCACATTAATTTCTTCG+GGG - chr7_2:79438060-79438079 Msa1080150:CDS 40.0%
AGACCCCGAAGAAATTAATG+TGG + chr7_2:79438066-79438085 None:intergenic 40.0%
TTATTGGCGGTATTTGAGCT+CGG + chr7_2:79438221-79438240 None:intergenic 40.0%
TTAAGCTCGTTAGTTGCGAA+AGG - chr7_2:79438269-79438288 Msa1080150:intron 40.0%
TGACAGCAATGCTTTCAGTT+TGG + chr7_2:79438361-79438380 None:intergenic 40.0%
AACTGAAGCAACTGGTAAAG+AGG + chr7_2:79438387-79438406 None:intergenic 40.0%
TGTGCTAGTTGATTGAGACA+AGG + chr7_2:79438480-79438499 None:intergenic 40.0%
TGCATTTCTCGAATGACATC+AGG + chr7_2:79438536-79438555 None:intergenic 40.0%
ATTGCGGTGATTGTGGTATT+AGG - chr7_2:79438597-79438616 Msa1080150:intron 40.0%
TAAAACAGACGGGAGTCAAT+TGG - chr7_2:79438802-79438821 Msa1080150:intron 40.0%
CACACAATACACACAAGCAT+TGG + chr7_2:79438853-79438872 None:intergenic 40.0%
CAATGCTTGTGTGTATTGTG+TGG - chr7_2:79438851-79438870 Msa1080150:intron 40.0%
CGAGATGGAAAGTAGAAATG+TGG - chr7_2:79438952-79438971 Msa1080150:intron 40.0%
CAAGCATCTAGCATGAATGA+TGG + chr7_2:79438981-79439000 None:intergenic 40.0%
!! ATAAGCTTCTGGCTTAACCT+TGG + chr7_2:79439193-79439212 None:intergenic 40.0%
GTTAAGCCAGAAGCTTATCA+AGG - chr7_2:79439195-79439214 Msa1080150:intron 40.0%
TTAGTATGCAACGAGAACCT+GGG + chr7_2:79439224-79439243 None:intergenic 40.0%
TTTAGTATGCAACGAGAACC+TGG + chr7_2:79439225-79439244 None:intergenic 40.0%
!!! ATTTTATGATGGTGATGGGG+CGG - chr7_2:79439428-79439447 Msa1080150:intron 40.0%
TTTAACACCTATGGGGATAC+CGG - chr7_2:79439460-79439479 Msa1080150:intron 40.0%
GCATAATATTATCCGCCGTT+TGG + chr7_2:79439534-79439553 None:intergenic 40.0%
CAAGGTCATCTTCATCCAAA+CGG - chr7_2:79439656-79439675 Msa1080150:CDS 40.0%
GCATAATATTATCCGCCGTT+TGG + chr7_2:79439534-79439553 None:intergenic 40.0%
TTGTAGCTCATCGTCAATCG+AGG + chr7_2:79433171-79433190 None:intergenic 45.0%
GAAACGTTCGTGAAGTGGAT+TGG + chr7_2:79433201-79433220 None:intergenic 45.0%
TTGAGGAAACGTTCGTGAAG+TGG + chr7_2:79433206-79433225 None:intergenic 45.0%
AACGACAACAACCTACCTCT+GGG - chr7_2:79433224-79433243 Msa1080150:three_prime_UTR 45.0%
! GACTCTGAAAGTAGTGATGG+TGG - chr7_2:79433292-79433311 Msa1080150:three_prime_UTR 45.0%
!! TCTGAAAGTAGTGATGGTGG+CGG - chr7_2:79433295-79433314 Msa1080150:three_prime_UTR 45.0%
TGCTGGAGAGAATCTTTCTG+CGG - chr7_2:79433429-79433448 Msa1080150:intron 45.0%
!! TTTCTGAAACCCACTTGGGT+TGG - chr7_2:79433758-79433777 Msa1080150:three_prime_UTR 45.0%
GAATCAAACCAGAGACCTTG+AGG + chr7_2:79433822-79433841 None:intergenic 45.0%
ATTCTCCCCAGTACCAACTT+GGG - chr7_2:79433838-79433857 Msa1080150:three_prime_UTR 45.0%
! CTAAACTAGCCTACCCAAGT+TGG + chr7_2:79433854-79433873 None:intergenic 45.0%
ATGGACTCCATTAGGATACC+GGG + chr7_2:79434075-79434094 None:intergenic 45.0%
CAAGTGGCGTTATTGAAACG+TGG - chr7_2:79434105-79434124 Msa1080150:CDS 45.0%
TTTGGAAACGTGTGTGTGTG+TGG - chr7_2:79434185-79434204 Msa1080150:CDS 45.0%
TTGGAAACGTGTGTGTGTGT+GGG - chr7_2:79434186-79434205 Msa1080150:CDS 45.0%
! GATAAAGCGAAGGCAGCTTT+TGG + chr7_2:79434465-79434484 None:intergenic 45.0%
CTCCTGTCCATTCAAGTATG+AGG - chr7_2:79434896-79434915 Msa1080150:CDS 45.0%
TGCCTCATACTTGAATGGAC+AGG + chr7_2:79434901-79434920 None:intergenic 45.0%
AATCATTTCACCTACCCTGC+TGG + chr7_2:79435118-79435137 None:intergenic 45.0%
! CTGCCATCAACTTTTGAGCT+TGG - chr7_2:79435263-79435282 Msa1080150:CDS 45.0%
! GATAAGTACTGTGAACCGGA+AGG + chr7_2:79435538-79435557 None:intergenic 45.0%
ATGCAAATGAAGACGCAGAG+AGG - chr7_2:79435809-79435828 Msa1080150:intron 45.0%
ACCTTATCCGGGCAAAGAAA+TGG - chr7_2:79436130-79436149 Msa1080150:intron 45.0%
ACCATTTCTTTGCCCGGATA+AGG + chr7_2:79436134-79436153 None:intergenic 45.0%
GCTGAAACCATTTCTTTGCC+CGG + chr7_2:79436140-79436159 None:intergenic 45.0%
! AGCACCGAAGTCTGTGAATT+TGG - chr7_2:79436186-79436205 Msa1080150:intron 45.0%
GCAGTGCAATGTCAAAGAAC+TGG - chr7_2:79436227-79436246 Msa1080150:intron 45.0%
CTGGAAAAATTCGGAGGAAG+AGG - chr7_2:79436246-79436265 Msa1080150:intron 45.0%
GATGGCCGATGAAGACAATT+TGG - chr7_2:79436348-79436367 Msa1080150:intron 45.0%
TAATCAAGACCCATTCACCC+TGG - chr7_2:79436566-79436585 Msa1080150:intron 45.0%
CTATCACAATAGGGTGGGAA+AGG - chr7_2:79436806-79436825 Msa1080150:CDS 45.0%
GTAAGACAGAACTGTGACCA+AGG - chr7_2:79436866-79436885 Msa1080150:CDS 45.0%
TCTATGCATGACTCTTTCCG+TGG - chr7_2:79436925-79436944 Msa1080150:CDS 45.0%
CTATGCATGACTCTTTCCGT+GGG - chr7_2:79436926-79436945 Msa1080150:CDS 45.0%
AACTTGGCATAAGATACCCC+AGG - chr7_2:79437038-79437057 Msa1080150:CDS 45.0%
GGTGTAATTGTAGAGTCCTG+GGG + chr7_2:79437057-79437076 None:intergenic 45.0%
! CAATTGGGTGTGTGATTTGG+AGG + chr7_2:79437252-79437271 None:intergenic 45.0%
CTCCAAATCACACACCCAAT+TGG - chr7_2:79437250-79437269 Msa1080150:CDS 45.0%
CACACACCCAATTGGAACAA+AGG - chr7_2:79437258-79437277 Msa1080150:CDS 45.0%
AACAACTACCATCATCTGGG+AGG - chr7_2:79437308-79437327 Msa1080150:intron 45.0%
GAATGCTTGGGTAAGCCATT+AGG + chr7_2:79437424-79437443 None:intergenic 45.0%
GCCGAAGAGTTTGAATGCTT+GGG + chr7_2:79437436-79437455 None:intergenic 45.0%
AGCCGAAGAGTTTGAATGCT+TGG + chr7_2:79437437-79437456 None:intergenic 45.0%
ATTGCTGCTGTCCCGTAATT+TGG + chr7_2:79437509-79437528 None:intergenic 45.0%
!! AGGTGAAGACTGTTCTGAAG+GGG + chr7_2:79437553-79437572 None:intergenic 45.0%
CGTATTGTTACTGGCACTGT+TGG + chr7_2:79437591-79437610 None:intergenic 45.0%
CCAAATTACGCATCGAAGGA+GGG + chr7_2:79437617-79437636 None:intergenic 45.0%
TCAGCCAAATTACGCATCGA+AGG + chr7_2:79437621-79437640 None:intergenic 45.0%
TGAACATTGGAACGAATGGC+AGG + chr7_2:79437720-79437739 None:intergenic 45.0%
TGCCATTCGTTCCAATGTTC+AGG - chr7_2:79437719-79437738 Msa1080150:intron 45.0%
TCACAAGAGAAGGATATGCG+GGG - chr7_2:79437759-79437778 Msa1080150:intron 45.0%
GAAATTAATGTGGTCGGGGA+AGG + chr7_2:79438056-79438075 None:intergenic 45.0%
ATTTGGAGAACCTAGTGACG+CGG + chr7_2:79438093-79438112 None:intergenic 45.0%
GAAGGCTGGAAAGAAGCAAA+AGG - chr7_2:79438148-79438167 Msa1080150:CDS 45.0%
CGATTGTTGGAGGAAGTAGA+TGG + chr7_2:79438185-79438204 None:intergenic 45.0%
TCTACTTCCTCCAACAATCG+TGG - chr7_2:79438185-79438204 Msa1080150:intron 45.0%
AACTACAGTGCCAAGTGAGA+CGG - chr7_2:79438319-79438338 Msa1080150:intron 45.0%
GAAACAGGAACTGAAGCAAC+TGG + chr7_2:79438395-79438414 None:intergenic 45.0%
AGCATCATCTGCCTCAATTC+TGG + chr7_2:79438441-79438460 None:intergenic 45.0%
GATGAACTCCCACATCATTG+CGG - chr7_2:79438581-79438600 Msa1080150:CDS 45.0%
CACAATCACCGCAATGATGT+GGG + chr7_2:79438592-79438611 None:intergenic 45.0%
GGTATGCAACATCAGATGAC+TGG - chr7_2:79438711-79438730 Msa1080150:intron 45.0%
ACATCAGATGACTGGATTGC+TGG - chr7_2:79438719-79438738 Msa1080150:intron 45.0%
TCTCGCTATCTGGATTGTTC+AGG + chr7_2:79438937-79438956 None:intergenic 45.0%
GAACAATCCAGATAGCGAGA+TGG - chr7_2:79438937-79438956 Msa1080150:intron 45.0%
CTACTTTCCATCTCGCTATC+TGG + chr7_2:79438947-79438966 None:intergenic 45.0%
ATTGGACCTGCTCTTTATGC+AGG - chr7_2:79439132-79439151 Msa1080150:intron 45.0%
CATGTTCCTGCATAAAGAGC+AGG + chr7_2:79439141-79439160 None:intergenic 45.0%
CTTGTATTGCATTGGAGCCA+AGG - chr7_2:79439173-79439192 Msa1080150:intron 45.0%
TAGGAAAGCAGCTAAGGCAA+TGG + chr7_2:79439274-79439293 None:intergenic 45.0%
ACTGCTTAGGAAAGCAGCTA+AGG + chr7_2:79439280-79439299 None:intergenic 45.0%
TTAACACCTATGGGGATACC+GGG - chr7_2:79439461-79439480 Msa1080150:intron 45.0%
GCAAGGTCATCTCATCCAAA+CGG - chr7_2:79439516-79439535 Msa1080150:intron 45.0%
! ACATTCTTTGGGAGGGATAC+CGG - chr7_2:79439617-79439636 Msa1080150:CDS 45.0%
GTAGCATAGCGCACAACATT+TGG + chr7_2:79439920-79439939 None:intergenic 45.0%
!! TATTATTATAATCAAATAAA+AGG + chr7_2:79434599-79434618 None:intergenic 5.0%
! CAATCGAGGTTTTTCGCACC+TGG + chr7_2:79433157-79433176 None:intergenic 50.0%
GAGGTAGGTTGTTGTCGTTG+AGG + chr7_2:79433223-79433242 None:intergenic 50.0%
CAACGACAACAACCTACCTC+TGG - chr7_2:79433223-79433242 Msa1080150:three_prime_UTR 50.0%
ACGACAACAACCTACCTCTG+GGG - chr7_2:79433225-79433244 Msa1080150:three_prime_UTR 50.0%
GTTGCTACGATGTTGTCGTC+TGG - chr7_2:79433247-79433266 Msa1080150:three_prime_UTR 50.0%
CTACGATGTTGTCGTCTGGT+AGG - chr7_2:79433251-79433270 Msa1080150:three_prime_UTR 50.0%
TGAGTCACCAGCTCTTGATG+CGG + chr7_2:79433343-79433362 None:intergenic 50.0%
AGAGCTGGTGACTCAGTACA+AGG - chr7_2:79433348-79433367 Msa1080150:three_prime_UTR 50.0%
!! TCGATTGCTGGTGCTGTTTG+TGG - chr7_2:79433457-79433476 Msa1080150:intron 50.0%
ATCATCAGGCCAACCCAAGT+GGG + chr7_2:79433770-79433789 None:intergenic 50.0%
!! TTGGGTTGGCCTGATGATGT+TGG - chr7_2:79433772-79433791 Msa1080150:three_prime_UTR 50.0%
! TTGGCCTGATGATGTTGGCT+TGG - chr7_2:79433777-79433796 Msa1080150:three_prime_UTR 50.0%
!! TGGCCTGATGATGTTGGCTT+GGG - chr7_2:79433778-79433797 Msa1080150:three_prime_UTR 50.0%
!! ATGATGTTGGCTTGGGACCT+TGG - chr7_2:79433785-79433804 Msa1080150:three_prime_UTR 50.0%
! TTGAGGAGGAGCACAATCCA+AGG + chr7_2:79433805-79433824 None:intergenic 50.0%
TTGGATTGTGCTCCTCCTCA+AGG - chr7_2:79433804-79433823 Msa1080150:three_prime_UTR 50.0%
TCAAACCAGAGACCTTGAGG+AGG + chr7_2:79433819-79433838 None:intergenic 50.0%
GATTCTCCCCAGTACCAACT+TGG - chr7_2:79433837-79433856 Msa1080150:three_prime_UTR 50.0%
!! AGCCTACCCAAGTTGGTACT+GGG + chr7_2:79433847-79433866 None:intergenic 50.0%
!! TAGCCTACCCAAGTTGGTAC+TGG + chr7_2:79433848-79433867 None:intergenic 50.0%
TAGGTACCAGGTTTGGGTAC+TGG - chr7_2:79434049-79434068 Msa1080150:CDS 50.0%
GTGGTGCTCTATCATTCTCC+TGG - chr7_2:79434124-79434143 Msa1080150:CDS 50.0%
GGTGTTCGTGTGTATGACGT+GGG - chr7_2:79434207-79434226 Msa1080150:CDS 50.0%
GTGTTCGTGTGTATGACGTG+GGG - chr7_2:79434208-79434227 Msa1080150:CDS 50.0%
! GCTTTTGGTCACTTGGAACC+TGG + chr7_2:79434450-79434469 None:intergenic 50.0%
! GAAGGCAGCTTTTGGTCACT+TGG + chr7_2:79434457-79434476 None:intergenic 50.0%
! CTTTGCTGTCAGACTACCTG+AGG - chr7_2:79434531-79434550 Msa1080150:CDS 50.0%
GGAACTCAACTTCAATCCCG+CGG - chr7_2:79434978-79434997 Msa1080150:CDS 50.0%
AACTTCAATCCCGCGGTCAA+TGG - chr7_2:79434985-79435004 Msa1080150:CDS 50.0%
AGAAGCTGAACCATTGACCG+CGG + chr7_2:79434998-79435017 None:intergenic 50.0%
TTAAGCCTAGGATCCAGCCA+TGG + chr7_2:79435861-79435880 None:intergenic 50.0%
!! GTTCCTGAAAAGAGCATCGG+CGG - chr7_2:79436010-79436029 Msa1080150:intron 50.0%
!! GGTTCAGGTGTTGGAAGAAC+CGG - chr7_2:79436079-79436098 Msa1080150:intron 50.0%
GTGTTGGAAGAACCGGAAGT+AGG - chr7_2:79436086-79436105 Msa1080150:intron 50.0%
AGAACCGGAAGTAGGCTCAT+TGG - chr7_2:79436094-79436113 Msa1080150:intron 50.0%
! GGTGTTGCAGAGACCTTATC+CGG - chr7_2:79436118-79436137 Msa1080150:intron 50.0%
GTGTTGCAGAGACCTTATCC+GGG - chr7_2:79436119-79436138 Msa1080150:intron 50.0%
GGAGGAAGAGGAGTTCATGT+GGG - chr7_2:79436258-79436277 Msa1080150:intron 50.0%
AGAGGAGTTCATGTGGGATG+AGG - chr7_2:79436264-79436283 Msa1080150:intron 50.0%
ACAACTTGAGCTCAGACCCA+TGG - chr7_2:79436326-79436345 Msa1080150:intron 50.0%
TGTCTTCATCGGCCATCCAT+GGG + chr7_2:79436345-79436364 None:intergenic 50.0%
TTGTCTTCATCGGCCATCCA+TGG + chr7_2:79436346-79436365 None:intergenic 50.0%
CAAAACCAGCCAGGGTGAAT+GGG + chr7_2:79436578-79436597 None:intergenic 50.0%
TCAAAACCAGCCAGGGTGAA+TGG + chr7_2:79436579-79436598 None:intergenic 50.0%
GATGAATGCCTCCCAGATGA+TGG + chr7_2:79437319-79437338 None:intergenic 50.0%
ATCATGGGAGTTGCAGAAGC+AGG - chr7_2:79437342-79437361 Msa1080150:intron 50.0%
ATTCAAACTCTTCGGCTGCG+AGG - chr7_2:79437440-79437459 Msa1080150:intron 50.0%
GTTGGAGACTGTTGTCGCAA+AGG + chr7_2:79437573-79437592 None:intergenic 50.0%
GGAGGGTTGCGTATTGTTAC+TGG + chr7_2:79437600-79437619 None:intergenic 50.0%
CCCTCCTTCGATGCGTAATT+TGG - chr7_2:79437614-79437633 Msa1080150:intron 50.0%
GCCAAATTACGCATCGAAGG+AGG + chr7_2:79437618-79437637 None:intergenic 50.0%
ATTGGAACGAATGGCAGGCA+CGG + chr7_2:79437715-79437734 None:intergenic 50.0%
! AGCTGCTGTTGCTGAGGTTT+TGG + chr7_2:79437813-79437832 None:intergenic 50.0%
AAAACCTCAGCAACAGCAGC+TGG - chr7_2:79437812-79437831 Msa1080150:intron 50.0%
AAACCTCAGCAACAGCAGCT+GGG - chr7_2:79437813-79437832 Msa1080150:intron 50.0%
TTTAAGCCTACTCGGTCAGG+TGG - chr7_2:79438029-79438048 Msa1080150:CDS 50.0%
!!! TGCGGTAGTTTTGGCAGAGT+AGG + chr7_2:79438125-79438144 None:intergenic 50.0%
ACTCTGCCAAAACTACCGCA+AGG - chr7_2:79438125-79438144 Msa1080150:CDS 50.0%
CTCTGCCAAAACTACCGCAA+GGG - chr7_2:79438126-79438145 Msa1080150:CDS 50.0%
TTCTTTCCAGCCTTCCCTTG+CGG + chr7_2:79438143-79438162 None:intergenic 50.0%
TGATGCACCACGATTGTTGG+AGG + chr7_2:79438195-79438214 None:intergenic 50.0%
AGCTGATGCACCACGATTGT+TGG + chr7_2:79438198-79438217 None:intergenic 50.0%
GCGAAAGGTTTGATATCCGC+AGG - chr7_2:79438284-79438303 Msa1080150:intron 50.0%
!! AGTTGCTGACTCTGTTCCTG+CGG + chr7_2:79438303-79438322 None:intergenic 50.0%
ACTGGGACAGCTGAAGAAAC+AGG + chr7_2:79438410-79438429 None:intergenic 50.0%
TGAGGCAGATGATGCTGCAA+AGG - chr7_2:79438445-79438464 Msa1080150:intron 50.0%
TGATTGAGACAAGGCAAGCG+AGG + chr7_2:79438471-79438490 None:intergenic 50.0%
CCACAATCACCGCAATGATG+TGG + chr7_2:79438593-79438612 None:intergenic 50.0%
CCACATCATTGCGGTGATTG+TGG - chr7_2:79438590-79438609 Msa1080150:intron 50.0%
AGATGACTGGATTGCTGGCA+AGG - chr7_2:79438724-79438743 Msa1080150:intron 50.0%
CGGGAGTCAATTGGACACTA+TGG - chr7_2:79438811-79438830 Msa1080150:intron 50.0%
AAGGGACGAGTGGATGTTCA+AGG - chr7_2:79438904-79438923 Msa1080150:intron 50.0%
AGGGACGAGTGGATGTTCAA+GGG - chr7_2:79438905-79438924 Msa1080150:intron 50.0%
GGGTACCCTTGATAAGCTTC+TGG + chr7_2:79439204-79439223 None:intergenic 50.0%
!! GAAGCTTATCAAGGGTACCC+AGG - chr7_2:79439204-79439223 Msa1080150:intron 50.0%
TAACACCTATGGGGATACCG+GGG - chr7_2:79439462-79439481 Msa1080150:intron 50.0%
AGGTCATCTCATCCAAACGG+CGG - chr7_2:79439519-79439538 Msa1080150:intron 50.0%
! CATTCTTTGGGAGGGATACC+GGG - chr7_2:79439618-79439637 Msa1080150:CDS 50.0%
! ATTCTTTGGGAGGGATACCG+GGG - chr7_2:79439619-79439638 Msa1080150:CDS 50.0%
GGTCATCTTCATCCAAACGG+CGG - chr7_2:79439659-79439678 Msa1080150:CDS 50.0%
ATCGTAGCAACCCCAGAGGT+AGG + chr7_2:79433238-79433257 None:intergenic 55.0%
CAACATCGTAGCAACCCCAG+AGG + chr7_2:79433242-79433261 None:intergenic 55.0%
!! GAAAGTAGTGATGGTGGCGG+TGG - chr7_2:79433298-79433317 Msa1080150:three_prime_UTR 55.0%
TCTGCGGCGAAATCGATTGC+TGG - chr7_2:79433445-79433464 Msa1080150:intron 55.0%
CATCATCAGGCCAACCCAAG+TGG + chr7_2:79433771-79433790 None:intergenic 55.0%
GGTCCCAAGCCAACATCATC+AGG + chr7_2:79433784-79433803 None:intergenic 55.0%
TCCCCAGTACCAACTTGGGT+AGG - chr7_2:79433842-79433861 Msa1080150:three_prime_UTR 55.0%
!! GCCTACCCAAGTTGGTACTG+GGG + chr7_2:79433846-79433865 None:intergenic 55.0%
! GTACTGGCCCGGTATCCTAA+TGG - chr7_2:79434065-79434084 Msa1080150:CDS 55.0%
GGGTGTTCGTGTGTATGACG+TGG - chr7_2:79434206-79434225 Msa1080150:CDS 55.0%
GAAGCTGAACCATTGACCGC+GGG + chr7_2:79434997-79435016 None:intergenic 55.0%
AACGTCTTCAGCAGTCCAGC+AGG - chr7_2:79435100-79435119 Msa1080150:CDS 55.0%
ACGTCTTCAGCAGTCCAGCA+GGG - chr7_2:79435101-79435120 Msa1080150:CDS 55.0%
AGAGAGGCCAGATCGAGCTT+TGG - chr7_2:79435825-79435844 Msa1080150:intron 55.0%
TGCAGCACCAAAGCTCGATC+TGG + chr7_2:79435835-79435854 None:intergenic 55.0%
ACCGGAAGTAGGCTCATTGG+CGG - chr7_2:79436097-79436116 Msa1080150:intron 55.0%
ACCGCCAATGAGCCTACTTC+CGG + chr7_2:79436101-79436120 None:intergenic 55.0%
CGGAGGAAGAGGAGTTCATG+TGG - chr7_2:79436257-79436276 Msa1080150:intron 55.0%
ATGTGGGATGAGGTGAACCC+TGG - chr7_2:79436274-79436293 Msa1080150:intron 55.0%
CTTGAGCTCAGACCCATGGA+TGG - chr7_2:79436330-79436349 Msa1080150:intron 55.0%
TTGGAACGAATGGCAGGCAC+GGG + chr7_2:79437714-79437733 None:intergenic 55.0%
ACAGCAGCTGGGTTCTTCAC+AGG - chr7_2:79437824-79437843 Msa1080150:intron 55.0%
CCACTCTTCACAGATGGAGC+TGG + chr7_2:79437945-79437964 None:intergenic 55.0%
CCAGCTCCATCTGTGAAGAG+TGG - chr7_2:79437942-79437961 Msa1080150:CDS 55.0%
GGGTTTAAGCCTACTCGGTC+AGG - chr7_2:79438026-79438045 Msa1080150:CDS 55.0%
GCCAAAACTACCGCAAGGGA+AGG - chr7_2:79438130-79438149 Msa1080150:CDS 55.0%
! GCCTTCCCTTGCGGTAGTTT+TGG + chr7_2:79438134-79438153 None:intergenic 55.0%
AAACTACCGCAAGGGAAGGC+TGG - chr7_2:79438134-79438153 Msa1080150:CDS 55.0%
GATCGCATCACCGTCTCACT+TGG + chr7_2:79438332-79438351 None:intergenic 55.0%
ACTGTCAGGAAAGGGACGAG+TGG - chr7_2:79438894-79438913 Msa1080150:intron 55.0%
AACACCTATGGGGATACCGG+GGG - chr7_2:79439463-79439482 Msa1080150:intron 55.0%
! TTCTTTGGGAGGGATACCGG+GGG - chr7_2:79439620-79439639 Msa1080150:CDS 55.0%
CTTGATGCGGCGGTGGTTGA+GGG + chr7_2:79433330-79433349 None:intergenic 60.0%
TCTTGATGCGGCGGTGGTTG+AGG + chr7_2:79433331-79433350 None:intergenic 60.0%
GTCACCAGCTCTTGATGCGG+CGG + chr7_2:79433340-79433359 None:intergenic 60.0%
GTGCTCCTCCTCAAGGTCTC+TGG - chr7_2:79433811-79433830 Msa1080150:three_prime_UTR 60.0%
!! ACCAGGTTTGGGTACTGGCC+CGG - chr7_2:79434054-79434073 Msa1080150:CDS 60.0%
CTTCAGCAGTCCAGCAGGGT+AGG - chr7_2:79435105-79435124 Msa1080150:CDS 60.0%
!! GCTTTGGTGCTGCACGTCCA+TGG - chr7_2:79435841-79435860 Msa1080150:intron 60.0%
CACGTCCATGGCTGGATCCT+AGG - chr7_2:79435853-79435872 Msa1080150:intron 60.0%
! GCTCCGCCGATGCTCTTTTC+AGG + chr7_2:79436016-79436035 None:intergenic 60.0%
!! AAGAGCATCGGCGGAGCCTA+TGG - chr7_2:79436019-79436038 Msa1080150:intron 60.0%
CAAGACCCATTCACCCTGGC+TGG - chr7_2:79436570-79436589 Msa1080150:intron 60.0%
GAACCCAGCTGCTGTTGCTG+AGG + chr7_2:79437819-79437838 None:intergenic 60.0%
GAAGGACCACCTGACCGAGT+AGG + chr7_2:79438038-79438057 None:intergenic 60.0%
TGGAGAACCTAGTGACGCGG+CGG + chr7_2:79438090-79438109 None:intergenic 60.0%
ACACCTATGGGGATACCGGG+GGG - chr7_2:79439464-79439483 Msa1080150:intron 60.0%
! TCTTTGGGAGGGATACCGGG+GGG - chr7_2:79439621-79439640 Msa1080150:CDS 60.0%
ACCACCGCCGCATCAAGAGC+TGG - chr7_2:79433333-79433352 Msa1080150:three_prime_UTR 65.0%
ACCAGCTCTTGATGCGGCGG+TGG + chr7_2:79433337-79433356 None:intergenic 65.0%
ACCGGGCCAGTACCCAAACC+TGG + chr7_2:79434058-79434077 None:intergenic 65.0%
!! TGGTGCTGCACGTCCATGGC+TGG - chr7_2:79435845-79435864 Msa1080150:intron 65.0%
GGCGGAGCCTATGGAGACGA+TGG - chr7_2:79436028-79436047 Msa1080150:intron 65.0%
GGAGAACCTAGTGACGCGGC+GGG + chr7_2:79438089-79438108 None:intergenic 65.0%
CACCTATGGGGATACCGGGG+GGG - chr7_2:79439465-79439484 Msa1080150:intron 65.0%
ACCTATGGGGATACCGGGGG+GGG - chr7_2:79439466-79439485 Msa1080150:intron 65.0%
GGGGGGGGGTAAACACAGCA+AGG - chr7_2:79439499-79439518 Msa1080150:intron 65.0%
! CTTTGGGAGGGATACCGGGG+GGG - chr7_2:79439622-79439641 Msa1080150:CDS 65.0%
TTTGGGAGGGATACCGGGGG+GGG - chr7_2:79439623-79439642 Msa1080150:CDS 65.0%
TTGCTGTGTAACCCCCCCCC+CGG + chr7_2:79439639-79439658 None:intergenic 65.0%
GATGCGGCGGTGGTTGAGGG+TGG + chr7_2:79433327-79433346 None:intergenic 70.0%
CCTATGGGGATACCGGGGGG+GGG - chr7_2:79439467-79439486 Msa1080150:intron 70.0%
CTATGGGGATACCGGGGGGG+GGG - chr7_2:79439468-79439487 Msa1080150:intron 70.0%
TATGGGGATACCGGGGGGGG+GGG - chr7_2:79439469-79439488 Msa1080150:intron 70.0%
TTGGGAGGGATACCGGGGGG+GGG - chr7_2:79439624-79439643 Msa1080150:CDS 70.0%
GGGGGGGGGGTTACACAGCA+AGG - chr7_2:79439638-79439657 Msa1080150:CDS 70.0%
GGGTCTCCCGCCGCGTCACT+AGG - chr7_2:79438080-79438099 Msa1080150:CDS 75.0%
CCCCCCCCCGGTATCCCCAT+AGG + chr7_2:79439470-79439489 None:intergenic 75.0%
ATGGGGATACCGGGGGGGGG+GGG - chr7_2:79439470-79439489 Msa1080150:intron 75.0%
TGGGAGGGATACCGGGGGGG+GGG - chr7_2:79439625-79439644 Msa1080150:CDS 75.0%
! TGGGGATACCGGGGGGGGGG+GGG - chr7_2:79439471-79439490 Msa1080150:intron 80.0%
! GGGGATACCGGGGGGGGGGG+GGG - chr7_2:79439472-79439491 Msa1080150:intron 85.0%
! GGGATACCGGGGGGGGGGGG+GGG - chr7_2:79439473-79439492 Msa1080150:intron 85.0%
! GGATACCGGGGGGGGGGGGG+GGG - chr7_2:79439474-79439493 Msa1080150:intron 85.0%
! GATACCGGGGGGGGGGGGGG+GGG - chr7_2:79439475-79439494 Msa1080150:intron 85.0%
! ATACCGGGGGGGGGGGGGGG+GGG - chr7_2:79439476-79439495 Msa1080150:intron 85.0%
! TACCGGGGGGGGGGGGGGGG+GGG - chr7_2:79439477-79439496 Msa1080150:intron 90.0%
! ACCGGGGGGGGGGGGGGGGG+GGG - chr7_2:79439478-79439497 Msa1080150:intron 95.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 79433113 79439941 79433113 ID=Msa1080150;Name=Msa1080150
chr7_2 mRNA 79433113 79439941 79433113 ID=Msa1080150-mRNA-1;Parent=Msa1080150;Name=Msa1080150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=143|0.77|0.7|1|0.66|0.6|10|580|949
chr7_2 exon 79433113 79433182 79433113 ID=Msa1080150-mRNA-1:exon:19999;Parent=Msa1080150-mRNA-1
chr7_2 exon 79433211 79433398 79433211 ID=Msa1080150-mRNA-1:exon:19998;Parent=Msa1080150-mRNA-1
chr7_2 exon 79433567 79433900 79433567 ID=Msa1080150-mRNA-1:exon:19997;Parent=Msa1080150-mRNA-1
chr7_2 exon 79434021 79435579 79434021 ID=Msa1080150-mRNA-1:exon:19996;Parent=Msa1080150-mRNA-1
chr7_2 exon 79435660 79435819 79435660 ID=Msa1080150-mRNA-1:exon:19995;Parent=Msa1080150-mRNA-1
chr7_2 exon 79436685 79437083 79436685 ID=Msa1080150-mRNA-1:exon:19994;Parent=Msa1080150-mRNA-1
chr7_2 exon 79437163 79437285 79437163 ID=Msa1080150-mRNA-1:exon:19993;Parent=Msa1080150-mRNA-1
chr7_2 exon 79437932 79438189 79437932 ID=Msa1080150-mRNA-1:exon:19992;Parent=Msa1080150-mRNA-1
chr7_2 exon 79438502 79438603 79438502 ID=Msa1080150-mRNA-1:exon:19991;Parent=Msa1080150-mRNA-1
chr7_2 exon 79439562 79439941 79439562 ID=Msa1080150-mRNA-1:exon:19990;Parent=Msa1080150-mRNA-1
chr7_2 five_prime_UTR 79439799 79439941 79439799 ID=Msa1080150-mRNA-1:five_prime_utr;Parent=Msa1080150-mRNA-1
chr7_2 CDS 79439562 79439798 79439562 ID=Msa1080150-mRNA-1:cds;Parent=Msa1080150-mRNA-1
chr7_2 CDS 79438502 79438603 79438502 ID=Msa1080150-mRNA-1:cds;Parent=Msa1080150-mRNA-1
chr7_2 CDS 79437932 79438189 79437932 ID=Msa1080150-mRNA-1:cds;Parent=Msa1080150-mRNA-1
chr7_2 CDS 79437163 79437285 79437163 ID=Msa1080150-mRNA-1:cds;Parent=Msa1080150-mRNA-1
chr7_2 CDS 79436685 79437083 79436685 ID=Msa1080150-mRNA-1:cds;Parent=Msa1080150-mRNA-1
chr7_2 CDS 79435660 79435819 79435660 ID=Msa1080150-mRNA-1:cds;Parent=Msa1080150-mRNA-1
chr7_2 CDS 79434021 79435579 79434021 ID=Msa1080150-mRNA-1:cds;Parent=Msa1080150-mRNA-1
chr7_2 CDS 79433889 79433900 79433889 ID=Msa1080150-mRNA-1:cds;Parent=Msa1080150-mRNA-1
chr7_2 three_prime_UTR 79433567 79433888 79433567 ID=Msa1080150-mRNA-1:three_prime_utr;Parent=Msa1080150-mRNA-1
chr7_2 three_prime_UTR 79433211 79433398 79433211 ID=Msa1080150-mRNA-1:three_prime_utr;Parent=Msa1080150-mRNA-1
chr7_2 three_prime_UTR 79433113 79433182 79433113 ID=Msa1080150-mRNA-1:three_prime_utr;Parent=Msa1080150-mRNA-1
Gene Sequence

>Msa1080150

ATGTTGTCGTCTGGTAGGTTTCGAATGAATGATATAGACTCTGAAAGTAGTGATGGTGGCGGTGGTTACCACCCTCAACCACCGCCGCATCAAGAGCTGGTGACTCAGTACAAGGCTGCTCTTGCTGAGCTTACTTTTAACTCGAAACCGATAATTACTAATTTGACTATAATTGCTGGAGAGAATCTTTCTGCGGCGAAATCGATTGCTGGTGCTGTTTGTGGTAACATTCTTGAGGTTCCAAGTGACCAAAAGCTGCCTTCGCTTTATCTCTTAGACAGTATTGTTAAGAATATTGGGCGGGATTACATAAAATACTTTGCTGTCAGACTACCTGAGGTATTCTGCAATACATACAGACAGGTTGATACTCCTGTCCATTCAAGTATGAGGCATCTTTTTGGAACTTGGAGAGGAGTCTTTCCTCCTCAGACTCTTCAGATAATTGAGAAGGAACTCAACTTCAATCCCGCGGTCAATGGTTCAGCTTCTGCATCTGCTACCCTTAGAAGTGATTCTCAGTCTCAACGCCCATCTCATAGCATCCATGTGAATCCCAAATATTTAGAAAGGCAACGTCTTCAGCAGTCCAGCAGGACTAAAGGAGTATTTGATGATATGGCTGGAGTTATTTCAAATGCAAATGAAGACGCAGAGAGGCCAGATCGAGCTTTGGTGCTGCACGTCCATGGCTGGATCCTAGGCTTAACATGCATGTATAATAATCAGCATACTCATAGAGGTGCACTTAATGACTCTGTTCCTGAAAAGAGCATCGGCGGAGCCTATGGAGACGATGGATATAATTCTAGTGTTTCAAATAGTTTGGGTTCAGGTGTTGGAAGAACCGGAAGTAGGCTCATTGGCGGTGTTGCAGAGACCTTATCCGGGCAAAGAAATGGTTTCAGCCTCAAACATAGTTTTTCAAATCATGAAGCACCGAAGTCTGTGAATTTGGATGCACATAGCATAAGGAGCAGTGCAATGTCAAAGAACTGGAAAAATTCGGAGGAAGAGGAGTTCATGTGGGATGAGGTGAACCCTGGTTTGTCTGATAATGTACCTAATGTCTCTAACAACTTGAGCTCAGACCCATGGATGGCCGATGAAGACAATTTGGAAAGTGAAGATCACCTCCAAATCACACACCCAATTGGAACAAAGGTTAATAAAGGAATATCCACTGTTAAGAAACAACTACCATCATCTGGGAGGCATTCATCATTATCATGGGAGTTGCAGAAGCAGGTCCCAAGTGCCAAATTGAATATGAAGCCAGTCTTCTATGCCGCATACAACAATAGGAATGTCCAAATTACGGGACAGCAGCAATTTGATTCTGAGGGGACAGAGTCCCCTTCAGAACAGTCTTCACCTTTGCGACAACAGTCTCCAACAGTGCCAGTAACAATACGCAACCCTCCTTCGATGCGTAATTTGGCTGAGCAAGATTGTCCAACATCTCTTAAAACATCTCAACATTTGGGTGGTCTGCAAAGACAATATATTAGAGATCCCGTGCCTGCCATTCGTTCCAATGTTCAGGTTGGTAACTTGCGAAAATCACAAGAGAAGGATATGCGGGGTCCGTTATCTTTAGCAACTTCTTTTCAGCCAAAACCTCAGCAACAGCAGCTGGGTTCTTCACAGGCTGAAGTTACTCTTAAAGCTAAGCAGCCACTCAAATCTAAAGCTCCTTTAGTCAAAGCCAAAGTGACTTCAGAAAAGTCAACTACAAAGTGTCTTCCAGCTCCATCTGTGAAGAGTGGAATCATTCCCAATAAATCAATTACGAGAAGTCTGGATGCAAGTAACTGTCCATCTCAAATAGGGTTTAAGCCTACTCGGTCAGGTGGTCCTTCCCCGACCACATTAATTTCTTCGGGGTCTCCCGCCGCGTCACTAGGTTCTCCAAATGATTATTCACCTACTCTGCCAAAACTACCGCAAGGGAAGGCTGGAAAGAAGCAAAAGGATTCTACTCAACCATCTACTTCCTCCAACAATCGTGGTGCATCAGCTCCGAGCTCAAATACCGCCAATAAGAATACCTTGAATCCAATTTCAAATCTTTTAAGCTCGTTAGTTGCGAAAGGTTTGATATCCGCAGGAACAGAGTCAGCAACTACAGTGCCAAGTGAGACGGTGATGCGATCGAAAGACCAAACTGAAAGCATTGCTGTCAGTTCCTCTTTACCAGTTGCTTCAGTTCCTGTTTCTTCAGCTGTCCCAGTAAAATCTTCCAGAATTGAGGCAGATGATGCTGCAAAGGCCTCGCTTGCCTTGTCTCAATCAACTAGCACAGAAATTAGAAATCTCATTGGCTTTGATTTCAAACCTGATGTCATTCGAGAAATGCACCCACATGTAATCGAAGAATTATTGGATGAACTCCCACATCATTGCGGTGATTGTGGTATTAGGCTTAAACAACAAGAACAGTTTAATAGACACTTGGAATGGCATGCTACAAAAGAAAGAGAACAAAATGGTCTGATTGTAGCATCAAGAAGATGGTATGCAACATCAGATGACTGGATTGCTGGCAAGGCAGAATGTCTGTCTGAGTCTGAGTTTACTGATTCTGTAGATGAATATGATGATAATAAAACAGACGGGAGTCAATTGGACACTATGGTTGTAGCAGATGAAAACCAATGCTTGTGTGTATTGTGTGGCGAGCTATTTGAAGATGTATACTGTCAGGAAAGGGACGAGTGGATGTTCAAGGGTGTATACCTGAACAATCCAGATAGCGAGATGGAAAGTAGAAATGTGGGGCCCATCATTCATGCTAGATGCTTGTCAGATAACTCAATACTTGGTGTGACTAATACAGAACATGATTGA
Protein sequence

>Msa1080150

MLSSGRFRMNDIDSESSDGGGGYHPQPPPHQELVTQYKAALAELTFNSKPIITNLTIIAGENLSAAKSIAGAVCGNILEVPSDQKLPSLYLLDSIVKNIGRDYIKYFAVRLPEVFCNTYRQVDTPVHSSMRHLFGTWRGVFPPQTLQIIEKELNFNPAVNGSASASATLRSDSQSQRPSHSIHVNPKYLERQRLQQSSRTKGVFDDMAGVISNANEDAERPDRALVLHVHGWILGLTCMYNNQHTHRGALNDSVPEKSIGGAYGDDGYNSSVSNSLGSGVGRTGSRLIGGVAETLSGQRNGFSLKHSFSNHEAPKSVNLDAHSIRSSAMSKNWKNSEEEEFMWDEVNPGLSDNVPNVSNNLSSDPWMADEDNLESEDHLQITHPIGTKVNKGISTVKKQLPSSGRHSSLSWELQKQVPSAKLNMKPVFYAAYNNRNVQITGQQQFDSEGTESPSEQSSPLRQQSPTVPVTIRNPPSMRNLAEQDCPTSLKTSQHLGGLQRQYIRDPVPAIRSNVQVGNLRKSQEKDMRGPLSLATSFQPKPQQQQLGSSQAEVTLKAKQPLKSKAPLVKAKVTSEKSTTKCLPAPSVKSGIIPNKSITRSLDASNCPSQIGFKPTRSGGPSPTTLISSGSPAASLGSPNDYSPTLPKLPQGKAGKKQKDSTQPSTSSNNRGASAPSSNTANKNTLNPISNLLSSLVAKGLISAGTESATTVPSETVMRSKDQTESIAVSSSLPVASVPVSSAVPVKSSRIEADDAAKASLALSQSTSTEIRNLIGFDFKPDVIREMHPHVIEELLDELPHHCGDCGIRLKQQEQFNRHLEWHATKEREQNGLIVASRRWYATSDDWIAGKAECLSESEFTDSVDEYDDNKTDGSQLDTMVVADENQCLCVLCGELFEDVYCQERDEWMFKGVYLNNPDSEMESRNVGPIIHARCLSDNSILGVTNTEHD*