Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129700 | PNX93281.1 | 60.476 | 420 | 117 | 5 | 539 | 951 | 88 | 465 | 5.03e-145 | 462 |
| Msa1129700 | PNX93281.1 | 63.974 | 916 | 190 | 10 | 24 | 894 | 21 | 841 | 0.0 | 1091 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129700 | sp|Q9SD34|C3H44_ARATH | 29.422 | 554 | 337 | 11 | 26 | 540 | 113 | 651 | 3.72e-61 | 230 |
| Msa1129700 | sp|Q9SD34|C3H44_ARATH | 24.554 | 448 | 279 | 11 | 541 | 947 | 214 | 643 | 5.55e-21 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129700 | A0A2K3MR27 | 60.476 | 420 | 117 | 5 | 539 | 951 | 88 | 465 | 2.40e-145 | 462 |
| Msa1129700 | A0A2K3MR27 | 63.974 | 916 | 190 | 10 | 24 | 894 | 21 | 841 | 0.0 | 1091 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1129700 | TR | SWI/SNF-BAF60b |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0631200 | Msa1129700 | 0.802869 | 4.572401e-49 | -8.615850e-47 |
| Msa0669440 | Msa1129700 | 0.803492 | 3.397713e-49 | -8.615850e-47 |
| Msa1129700 | Msa1203250 | 0.801582 | 8.413541e-49 | -8.615850e-47 |
| Msa1129700 | Msa1322890 | 0.805446 | 1.329903e-49 | -8.615850e-47 |
| Msa1129700 | Msa1446770 | 0.868024 | 8.876997e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129700 | MtrunA17_Chr7g0274571 | 93.458 | 321 | 19 | 1 | 558 | 878 | 2 | 320 | 0.0 | 617 |
| Msa1129700 | MtrunA17_Chr7g0274571 | 75.701 | 321 | 74 | 3 | 144 | 463 | 2 | 319 | 3.31e-162 | 478 |
| Msa1129700 | MtrunA17_Chr7g0274561 | 81.654 | 387 | 31 | 4 | 128 | 483 | 24 | 401 | 0.0 | 613 |
| Msa1129700 | MtrunA17_Chr7g0274561 | 66.150 | 387 | 91 | 4 | 542 | 897 | 24 | 401 | 1.81e-165 | 491 |
| Msa1129700 | MtrunA17_Chr3g0109611 | 35.798 | 514 | 279 | 10 | 23 | 500 | 15 | 513 | 1.25e-89 | 296 |
| Msa1129700 | MtrunA17_Chr3g0109611 | 32.143 | 420 | 234 | 11 | 539 | 921 | 117 | 522 | 1.82e-48 | 181 |
| Msa1129700 | MtrunA17_Chr7g0274551 | 92.754 | 138 | 7 | 1 | 1 | 135 | 1 | 138 | 2.44e-85 | 270 |
| Msa1129700 | MtrunA17_Chr3g0109631 | 35.244 | 471 | 269 | 8 | 23 | 466 | 15 | 476 | 2.15e-84 | 280 |
| Msa1129700 | MtrunA17_Chr3g0109631 | 32.527 | 372 | 209 | 8 | 539 | 880 | 117 | 476 | 2.57e-42 | 162 |
| Msa1129700 | MtrunA17_Chr3g0109641 | 32.109 | 626 | 292 | 18 | 23 | 536 | 15 | 619 | 2.91e-75 | 264 |
| Msa1129700 | MtrunA17_Chr3g0109641 | 29.747 | 316 | 175 | 9 | 539 | 824 | 117 | 415 | 2.97e-21 | 100 |
| Msa1129700 | MtrunA17_Chr3g0109641 | 35.862 | 145 | 64 | 2 | 826 | 946 | 478 | 617 | 9.52e-17 | 85.5 |
| Msa1129700 | MtrunA17_Chr3g0109591 | 35.469 | 437 | 231 | 9 | 5 | 410 | 3 | 419 | 1.55e-69 | 238 |
| Msa1129700 | MtrunA17_Chr3g0109591 | 28.939 | 311 | 188 | 5 | 539 | 824 | 117 | 419 | 3.19e-24 | 106 |
| Msa1129700 | MtrunA17_Chr5g0405071 | 31.335 | 517 | 302 | 11 | 1 | 475 | 64 | 569 | 2.15e-67 | 237 |
| Msa1129700 | MtrunA17_Chr5g0405071 | 28.191 | 376 | 224 | 11 | 547 | 889 | 207 | 569 | 2.06e-25 | 112 |
| Msa1129700 | MtrunA17_Chr6g0477441 | 39.568 | 278 | 153 | 4 | 629 | 901 | 35 | 302 | 3.24e-50 | 181 |
| Msa1129700 | MtrunA17_Chr6g0477441 | 40.741 | 270 | 150 | 4 | 216 | 482 | 35 | 297 | 5.12e-50 | 180 |
| Msa1129700 | MtrunA17_Chr3g0145201 | 28.509 | 456 | 285 | 9 | 22 | 442 | 227 | 676 | 7.07e-42 | 166 |
| Msa1129700 | MtrunA17_Chr3g0109661 | 50.000 | 120 | 59 | 1 | 762 | 880 | 38 | 157 | 2.85e-31 | 120 |
| Msa1129700 | MtrunA17_Chr3g0109661 | 45.833 | 120 | 64 | 1 | 348 | 466 | 38 | 157 | 1.07e-27 | 110 |
| Msa1129700 | MtrunA17_Chr5g0405031 | 42.759 | 145 | 76 | 3 | 22 | 163 | 68 | 208 | 2.26e-29 | 125 |
| Msa1129700 | MtrunA17_Chr3g0109671 | 45.528 | 123 | 67 | 0 | 23 | 145 | 15 | 137 | 2.29e-29 | 114 |
| Msa1129700 | MtrunA17_Chr3g0145241 | 25.067 | 375 | 247 | 7 | 132 | 474 | 4 | 376 | 4.37e-19 | 90.9 |
| Msa1129700 | MtrunA17_Chr3g0145241 | 29.762 | 252 | 147 | 8 | 657 | 888 | 135 | 376 | 1.19e-18 | 89.7 |
| Msa1129700 | MtrunA17_Chr3g0109581 | 37.931 | 87 | 48 | 2 | 816 | 896 | 40 | 126 | 7.42e-14 | 70.5 |
| Msa1129700 | MtrunA17_Chr3g0109581 | 39.130 | 69 | 42 | 0 | 414 | 482 | 58 | 126 | 3.52e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129700 | AT5G63700.1 | 35.172 | 580 | 276 | 14 | 25 | 523 | 24 | 584 | 2.08e-96 | 316 |
| Msa1129700 | AT5G63700.1 | 31.579 | 475 | 239 | 10 | 538 | 938 | 123 | 585 | 4.20e-55 | 202 |
| Msa1129700 | AT5G63700.2 | 35.842 | 505 | 239 | 12 | 25 | 463 | 24 | 509 | 3.05e-85 | 284 |
| Msa1129700 | AT5G63700.2 | 31.500 | 400 | 203 | 8 | 538 | 878 | 123 | 510 | 6.02e-42 | 162 |
| Msa1129700 | AT3G51120.1 | 30.228 | 483 | 290 | 8 | 26 | 474 | 113 | 582 | 1.03e-60 | 226 |
| Msa1129700 | AT3G51120.1 | 25.893 | 336 | 212 | 7 | 633 | 935 | 319 | 650 | 3.25e-21 | 100 |
| Msa1129700 | AT2G16485.1 | 31.084 | 489 | 303 | 11 | 22 | 482 | 598 | 1080 | 4.23e-56 | 212 |
| Msa1129700 | AT2G16485.1 | 25.193 | 389 | 238 | 9 | 546 | 896 | 707 | 1080 | 1.17e-20 | 99.0 |
| Msa1129700 | AT2G16485.2 | 31.084 | 489 | 303 | 11 | 22 | 482 | 598 | 1080 | 5.79e-56 | 212 |
| Msa1129700 | AT2G16485.2 | 24.276 | 449 | 267 | 13 | 546 | 940 | 707 | 1136 | 6.99e-21 | 99.8 |
| Msa1129700 | AT5G08430.2 | 34.819 | 359 | 199 | 5 | 609 | 951 | 10 | 349 | 7.70e-51 | 186 |
| Msa1129700 | AT5G08430.2 | 34.324 | 370 | 209 | 5 | 192 | 543 | 2 | 355 | 8.48e-51 | 186 |
| Msa1129700 | AT5G08430.1 | 35.569 | 343 | 187 | 5 | 192 | 516 | 2 | 328 | 5.75e-50 | 186 |
| Msa1129700 | AT5G08430.1 | 35.097 | 359 | 198 | 5 | 609 | 951 | 10 | 349 | 9.59e-50 | 186 |
| Msa1129700 | AT5G23480.3 | 34.593 | 344 | 179 | 9 | 610 | 930 | 5 | 325 | 2.54e-42 | 161 |
| Msa1129700 | AT5G23480.3 | 32.733 | 333 | 180 | 7 | 207 | 516 | 14 | 325 | 4.68e-37 | 145 |
| Msa1129700 | AT5G23480.2 | 34.593 | 344 | 179 | 9 | 610 | 930 | 5 | 325 | 2.54e-42 | 161 |
| Msa1129700 | AT5G23480.2 | 32.733 | 333 | 180 | 7 | 207 | 516 | 14 | 325 | 4.68e-37 | 145 |
| Msa1129700 | AT5G23480.5 | 34.593 | 344 | 179 | 9 | 610 | 930 | 5 | 325 | 2.54e-42 | 161 |
| Msa1129700 | AT5G23480.5 | 32.733 | 333 | 180 | 7 | 207 | 516 | 14 | 325 | 4.68e-37 | 145 |
| Msa1129700 | AT5G23480.4 | 34.593 | 344 | 179 | 9 | 610 | 930 | 5 | 325 | 2.54e-42 | 161 |
| Msa1129700 | AT5G23480.4 | 32.733 | 333 | 180 | 7 | 207 | 516 | 14 | 325 | 4.68e-37 | 145 |
| Msa1129700 | AT5G23480.6 | 34.593 | 344 | 179 | 9 | 610 | 930 | 5 | 325 | 2.54e-42 | 161 |
| Msa1129700 | AT5G23480.6 | 32.733 | 333 | 180 | 7 | 207 | 516 | 14 | 325 | 4.68e-37 | 145 |
| Msa1129700 | AT5G23480.1 | 35.258 | 329 | 166 | 9 | 610 | 930 | 5 | 294 | 1.65e-39 | 152 |
| Msa1129700 | AT5G23480.1 | 31.889 | 323 | 165 | 7 | 207 | 516 | 14 | 294 | 1.44e-34 | 137 |
| Msa1129700 | AT2G18090.1 | 28.231 | 294 | 192 | 2 | 21 | 295 | 77 | 370 | 9.87e-39 | 155 |
| Msa1129700 | AT2G18090.2 | 28.231 | 294 | 192 | 2 | 21 | 295 | 77 | 370 | 1.05e-38 | 155 |
Find 188 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATATTATTGGCATTAA+TGG | 0.087050 | 7_3:-81665207 | None:intergenic |
| CAACTTACAACAGTTAATTT+TGG | 0.146059 | 7_3:-81665713 | None:intergenic |
| GTAGATAAGCTTGATATTAT+TGG | 0.200102 | 7_3:-81665216 | None:intergenic |
| GAGGAATTTCTTCTTGTCTT+TGG | 0.217143 | 7_3:-81664931 | None:intergenic |
| TGTTGTCCGTCGAACAATTT+TGG | 0.226288 | 7_3:-81667671 | None:intergenic |
| AGGAATTTCTTCTTGTCTTT+GGG | 0.247161 | 7_3:-81664930 | None:intergenic |
| AGCAAGATTGTGAGGATTTA+CGG | 0.274046 | 7_3:+81665666 | Msa1129700:intron |
| ACCTTACTCGCAAAGCTTTC+AGG | 0.287933 | 7_3:-81667867 | None:intergenic |
| TGCACTTCCCAACAAAATAA+AGG | 0.317725 | 7_3:+81667236 | Msa1129700:CDS |
| TGTATATTCTTCAATATTGT+TGG | 0.325248 | 7_3:-81664730 | None:intergenic |
| ATTCCTTAGCTTATGATCAT+TGG | 0.326667 | 7_3:-81667922 | None:intergenic |
| CTATACCGCTTCCGTTTGTT+CGG | 0.331205 | 7_3:-81667354 | None:intergenic |
| AATTACTCCAATGGAAATAA+AGG | 0.340270 | 7_3:+81667312 | Msa1129700:CDS |
| AGCCAATTGTCCAGCTTAAT+AGG | 0.343282 | 7_3:+81665131 | Msa1129700:CDS |
| TTGGAATTTACATTAGTTAG+AGG | 0.344447 | 7_3:+81663750 | Msa1129700:CDS |
| AGGCCTGTGCTGTGACTGTT+TGG | 0.348457 | 7_3:+81663779 | Msa1129700:CDS |
| TCTCATAAATGAATACATTA+AGG | 0.352777 | 7_3:+81664890 | Msa1129700:CDS |
| GATACTAGGCTCCTAGTTAT+CGG | 0.352800 | 7_3:-81669280 | None:intergenic |
| ATTCCTTAGCTTGTGATCAT+TGG | 0.355590 | 7_3:-81665330 | None:intergenic |
| ATCTTTACCCTTTCGATAGT+TGG | 0.357251 | 7_3:-81664652 | None:intergenic |
| TCAGAAATGGAAATAGATTT+AGG | 0.357343 | 7_3:-81668195 | None:intergenic |
| TCTAGCTTCCTGGCATCTAT+AGG | 0.360380 | 7_3:+81667414 | Msa1129700:CDS |
| ATGATGATCAAGAAGAAAAT+TGG | 0.371027 | 7_3:+81663120 | Msa1129700:CDS |
| GAACATGATGAAATGTCTAA+TGG | 0.372940 | 7_3:+81668147 | Msa1129700:CDS |
| AATGTCTATTCAAGGAATAC+TGG | 0.375501 | 7_3:+81664574 | Msa1129700:CDS |
| TTTACATCCCTTCGCATCAT+TGG | 0.377241 | 7_3:-81667453 | None:intergenic |
| CTTATTCCCCATCGCATCAT+TGG | 0.379502 | 7_3:-81664864 | None:intergenic |
| CGAACACCAAGCTTCGCTTT+AGG | 0.380474 | 7_3:-81667830 | None:intergenic |
| GCCTGAAAGCTTTGCGAGTA+AGG | 0.381269 | 7_3:+81667866 | Msa1129700:CDS |
| TCATCATCATCAACCGGTTC+AGG | 0.384236 | 7_3:-81663104 | None:intergenic |
| ATCCCTTCGCATCATTGGTT+CGG | 0.392576 | 7_3:-81667448 | None:intergenic |
| AATGGAAATAAAGGTTATTC+AGG | 0.394196 | 7_3:+81667321 | Msa1129700:CDS |
| TGAATAACCTTTATTTCCAT+TGG | 0.397923 | 7_3:-81667319 | None:intergenic |
| ATTCCTTGAATAGACATTCA+TGG | 0.402864 | 7_3:-81667161 | None:intergenic |
| GAATTCGTTGGATGGGCATC+AGG | 0.404245 | 7_3:+81667384 | Msa1129700:CDS |
| TATCATGTTGTGAGAGTCAT+AGG | 0.404713 | 7_3:+81667948 | Msa1129700:CDS |
| TATCATCTTGTGAGAGTCAT+AGG | 0.407152 | 7_3:+81665356 | Msa1129700:CDS |
| AGGACCTCTCTCTAGCTTCC+TGG | 0.410169 | 7_3:+81667404 | Msa1129700:CDS |
| AAACGGAAGCGGTATAGTTC+AGG | 0.411949 | 7_3:+81667360 | Msa1129700:CDS |
| ATAGGAAACAACTTGTCATC+AGG | 0.416326 | 7_3:-81664954 | None:intergenic |
| GCATGAAAGCTTTGTGAGTA+AGG | 0.417101 | 7_3:+81665274 | Msa1129700:CDS |
| CTAGCTTCCTGGCATCTATA+GGG | 0.417278 | 7_3:+81667415 | Msa1129700:CDS |
| GTCCTATTAAGCTGGACAAT+TGG | 0.417908 | 7_3:-81665133 | None:intergenic |
| ATCATCAGAGAGCTCAGAAA+TGG | 0.423094 | 7_3:-81668208 | None:intergenic |
| TCTCATGTTTGAATACATTA+CGG | 0.427420 | 7_3:+81667479 | Msa1129700:CDS |
| TGCGGAAAGATCGGTTGATT+CGG | 0.428580 | 7_3:+81667623 | Msa1129700:CDS |
| TCATCCTTTCCAACACAATC+AGG | 0.433058 | 7_3:-81663361 | None:intergenic |
| GGAATACTGGGGAATTGTTA+AGG | 0.434825 | 7_3:+81664587 | Msa1129700:CDS |
| GAACATGATGAAATGTCTAA+TGG | 0.435204 | 7_3:+81665499 | Msa1129700:CDS |
| TCAGAGATGGAAATAGCTTT+AGG | 0.435649 | 7_3:-81665547 | None:intergenic |
| TTTGCAGAACAAAATAAGCT+TGG | 0.441190 | 7_3:+81667125 | Msa1129700:intron |
| AACATATGAATGTCTATTCA+AGG | 0.441215 | 7_3:+81664566 | Msa1129700:CDS |
| CAAAAGAAAACAACCTGAAC+CGG | 0.443683 | 7_3:+81663091 | Msa1129700:CDS |
| ATTGGAAACAACTTATCGTC+AGG | 0.444881 | 7_3:-81667543 | None:intergenic |
| AGCAAGAATGCGAGGATTTG+CGG | 0.448420 | 7_3:+81668313 | Msa1129700:intron |
| TCTTTACCCTTTCGATAGTT+GGG | 0.450321 | 7_3:-81664651 | None:intergenic |
| ACATTAGTTAGAGGTGTTCA+AGG | 0.454667 | 7_3:+81663759 | Msa1129700:CDS |
| TATCGATGATGAAACATGTA+TGG | 0.454872 | 7_3:+81667698 | Msa1129700:CDS |
| TCTTGATCATCATCATCAAC+CGG | 0.455651 | 7_3:-81663110 | None:intergenic |
| AACCCATGAATGTCTATTCA+AGG | 0.456893 | 7_3:+81667158 | Msa1129700:CDS |
| CGCAATGTGAAACTTGAGTA+GGG | 0.459804 | 7_3:-81667604 | None:intergenic |
| TGCATTACCTCCATAAGCTC+GGG | 0.466909 | 7_3:-81666653 | None:intergenic |
| AACAATTGTTCTAGTTTCTG+TGG | 0.467697 | 7_3:-81666608 | None:intergenic |
| TTCCTTGAATAGACATTCAT+GGG | 0.468587 | 7_3:-81667160 | None:intergenic |
| TCTAGCTTCCTTGCATCCAT+AGG | 0.471248 | 7_3:+81664825 | Msa1129700:CDS |
| GCACTTCCCAACAAAATAAA+GGG | 0.474252 | 7_3:+81667237 | Msa1129700:CDS |
| ATGTCTATTCAAGGAATTTG+AGG | 0.475733 | 7_3:+81667167 | Msa1129700:CDS |
| ATAAGCTGAAGAAACATAAT+CGG | 0.476295 | 7_3:+81664760 | Msa1129700:CDS |
| AAAGATTATAGAACTAAAGT+TGG | 0.479683 | 7_3:+81663809 | Msa1129700:CDS |
| AACAATATTGAAGAATATAC+AGG | 0.485787 | 7_3:+81664732 | Msa1129700:CDS |
| TATCGATGATCAGACATGTC+TGG | 0.485794 | 7_3:+81665106 | Msa1129700:CDS |
| AATTGCATTACTAGATGAAA+GGG | 0.488740 | 7_3:+81669146 | Msa1129700:CDS |
| GAAAATGTTGAGGTGAGAAA+AGG | 0.496685 | 7_3:+81667189 | Msa1129700:CDS |
| ATCGGTTGATTCGGCTGGAA+AGG | 0.496714 | 7_3:+81667632 | Msa1129700:CDS |
| AGAAACAAGAACAACTGTTA+AGG | 0.498194 | 7_3:+81669187 | Msa1129700:CDS |
| GCTTATCATCCTGATTGTGT+TGG | 0.504522 | 7_3:+81663352 | Msa1129700:CDS |
| GGACAACCTCTGTTGAGAAA+AGG | 0.506390 | 7_3:+81665152 | Msa1129700:CDS |
| AGAAACTAGAACAATTGTTA+AGG | 0.509733 | 7_3:+81666612 | Msa1129700:CDS |
| ACATAATCGGTATAGTTCAA+TGG | 0.510483 | 7_3:+81664773 | Msa1129700:CDS |
| CAGAGGTTGTCCTATTAAGC+TGG | 0.511418 | 7_3:-81665141 | None:intergenic |
| CAGAACAAAATAAGCTTGGA+TGG | 0.511928 | 7_3:+81667129 | Msa1129700:intron |
| ATGTCTATTCAAGGAATACT+GGG | 0.512936 | 7_3:+81664575 | Msa1129700:CDS |
| GTTTCACATTGCGGAAAGAT+CGG | 0.513307 | 7_3:+81667614 | Msa1129700:CDS |
| ATGATCATTGGAATCTACTC+TGG | 0.514132 | 7_3:-81667910 | None:intergenic |
| AACAGTTGTTCTTGTTTCTG+TGG | 0.515750 | 7_3:-81669183 | None:intergenic |
| GTGATCATTGGAGTCTACTC+TGG | 0.515780 | 7_3:-81665318 | None:intergenic |
| TTAATCAATGCAAAACATCC+AGG | 0.516424 | 7_3:-81667783 | None:intergenic |
| AATGATTCTGATGAAGAAAG+TGG | 0.517048 | 7_3:+81666677 | Msa1129700:CDS |
| CCGTGGTGAAACCGATAACT+AGG | 0.518748 | 7_3:+81669269 | Msa1129700:CDS |
| AAGTGGGGAAACAGATAGCC+AGG | 0.518858 | 7_3:+81666694 | Msa1129700:CDS |
| AACGGAACCAATGATGCGAT+GGG | 0.520561 | 7_3:+81664857 | Msa1129700:CDS |
| AACGGAAGCGGTATAGTTCA+GGG | 0.521055 | 7_3:+81667361 | Msa1129700:CDS |
| AATTGCATTACTAAATGAAA+GGG | 0.524101 | 7_3:+81666571 | Msa1129700:CDS |
| CCGCAATGTGAAACTTGAGT+AGG | 0.524398 | 7_3:-81667605 | None:intergenic |
| GAAAGATCGGTTGATTCGGC+TGG | 0.525189 | 7_3:+81667627 | Msa1129700:CDS |
| TTCAGGGGAATTCGTTGGAT+GGG | 0.525846 | 7_3:+81667377 | Msa1129700:CDS |
| GGAAATAGATTTAGGCATGA+AGG | 0.526915 | 7_3:-81668187 | None:intergenic |
| TATAGTTCAGGGGAATTCGT+TGG | 0.533847 | 7_3:+81667372 | Msa1129700:CDS |
| AAATTGCATTACTAAATGAA+AGG | 0.535440 | 7_3:+81666570 | Msa1129700:CDS |
| AAACGGAACCAATGATGCGA+TGG | 0.536262 | 7_3:+81664856 | Msa1129700:CDS |
| CCTCATCTGAGTCATGGTCC+TGG | 0.538187 | 7_3:-81666712 | None:intergenic |
| ATCAGTTTCTCCCGAGCATG+TGG | 0.538251 | 7_3:+81669218 | Msa1129700:CDS |
| ATATGTTTCTCTGTCGTCCA+AGG | 0.539917 | 7_3:-81664550 | None:intergenic |
| ATTTCTTCTTGTCTTTGGGA+TGG | 0.543545 | 7_3:-81664926 | None:intergenic |
| ACCGTAGAATCTTGGGTTTG+TGG | 0.545355 | 7_3:+81663397 | Msa1129700:CDS |
| ATGCATTACCTCCATAAGCT+CGG | 0.545799 | 7_3:-81666654 | None:intergenic |
| AAATTGCATTACTAGATGAA+AGG | 0.545831 | 7_3:+81669145 | Msa1129700:CDS |
| TTCAATGGAATTCGTCGGAT+GGG | 0.548282 | 7_3:+81664788 | Msa1129700:CDS |
| TATCTACCTAAAACGAAGCT+TGG | 0.548941 | 7_3:+81665232 | Msa1129700:CDS |
| ACCACAAACCCAAGATTCTA+CGG | 0.549930 | 7_3:-81663398 | None:intergenic |
| TACGCAGAACAAAATAACCT+TGG | 0.550110 | 7_3:+81664533 | Msa1129700:intron |
| TTCAGGTGATTCATCTGGAA+AGG | 0.551001 | 7_3:+81665043 | Msa1129700:CDS |
| TTAATGGATGCAAAACATCC+AGG | 0.552547 | 7_3:-81665191 | None:intergenic |
| GGAATTTGAGGAAAATGTTG+AGG | 0.552644 | 7_3:+81667179 | Msa1129700:CDS |
| TTGTACTGCACAAATGGTCA+AGG | 0.552786 | 7_3:-81669122 | None:intergenic |
| TTTATTTATTTCAGGAACTG+TGG | 0.553535 | 7_3:+81663325 | Msa1129700:intron |
| CATATCTCCCTATAGATGCC+AGG | 0.553627 | 7_3:-81667422 | None:intergenic |
| CTAGCTTCCTTGCATCCATA+GGG | 0.554938 | 7_3:+81664826 | Msa1129700:CDS |
| GTATGCATAAGCCGAACAAA+CGG | 0.559115 | 7_3:+81667343 | Msa1129700:CDS |
| ATGATTCTGATGAAGAAAGT+GGG | 0.561773 | 7_3:+81666678 | Msa1129700:CDS |
| TTCGTCAGAGAGCTCAGAGA+TGG | 0.562351 | 7_3:-81665560 | None:intergenic |
| TGCACTGCCCAACTATCGAA+AGG | 0.564416 | 7_3:+81664644 | Msa1129700:CDS |
| AGCTTTGCGAGTAAGGTGGT+TGG | 0.565903 | 7_3:+81667873 | Msa1129700:CDS |
| TGGAAATAGCTTTAGGCATG+AGG | 0.567111 | 7_3:-81665540 | None:intergenic |
| ATCCATAGGGAGATACAAAA+CGG | 0.567810 | 7_3:+81664839 | Msa1129700:CDS |
| ACTCCAATGATCACAAGCTA+AGG | 0.569766 | 7_3:+81665327 | Msa1129700:CDS |
| GTTCAGGGGAATTCGTTGGA+TGG | 0.572914 | 7_3:+81667376 | Msa1129700:CDS |
| GGTGATACGTGTATAAAACC+TGG | 0.573802 | 7_3:+81667765 | Msa1129700:CDS |
| TGTATCTCCCTATGGATGCA+AGG | 0.575830 | 7_3:-81664833 | None:intergenic |
| TTGTACAACACAAACAGTCA+AGG | 0.579205 | 7_3:-81666547 | None:intergenic |
| GGAATTGTTAAGGAAAGAGA+AGG | 0.579944 | 7_3:+81664597 | Msa1129700:CDS |
| CGTCATACAAGCCACGGCGA+AGG | 0.580146 | 7_3:+81667273 | Msa1129700:CDS |
| AAACCGAACCAATGATGCGA+AGG | 0.581525 | 7_3:+81667445 | Msa1129700:CDS |
| ATTCCAATGATCATAAGCTA+AGG | 0.583714 | 7_3:+81667919 | Msa1129700:CDS |
| GGTGATATATGTATAAAACC+TGG | 0.584186 | 7_3:+81665173 | Msa1129700:CDS |
| CTTCATAAAATTCACAGTGA+AGG | 0.585984 | 7_3:+81664681 | Msa1129700:CDS |
| AAAGTTGGACCATGATTCTG+AGG | 0.587329 | 7_3:+81663824 | Msa1129700:CDS |
| GCACTGCCCAACTATCGAAA+GGG | 0.591134 | 7_3:+81664645 | Msa1129700:CDS |
| TATCTACCTAAAGCGAAGCT+TGG | 0.591743 | 7_3:+81667824 | Msa1129700:CDS |
| AACAAATTGTTCGACAGACA+AGG | 0.592467 | 7_3:+81665082 | Msa1129700:CDS |
| ACATGCTCGGGAGAAACTGA+TGG | 0.593446 | 7_3:-81669216 | None:intergenic |
| TAGGAAACAACTTGTCATCA+GGG | 0.594776 | 7_3:-81664953 | None:intergenic |
| GGAAATAGCTTTAGGCATGA+GGG | 0.596323 | 7_3:-81665539 | None:intergenic |
| AGCTTTGTGAGTAAGGTGGT+TGG | 0.598858 | 7_3:+81665281 | Msa1129700:CDS |
| CACTTACCTCATCTGAGTCA+TGG | 0.599815 | 7_3:-81666718 | None:intergenic |
| TCATCCTGATTGTGTTGGAA+AGG | 0.600198 | 7_3:+81663357 | Msa1129700:CDS |
| GAAGGAGGATCTTCAAGAGA+AGG | 0.601055 | 7_3:+81665814 | Msa1129700:intron |
| GCAGGTGGATCTTCAAGAGA+AGG | 0.603761 | 7_3:+81668636 | Msa1129700:intron |
| TTACTTACAGCAAGATTGTG+AGG | 0.605927 | 7_3:+81665658 | Msa1129700:intron |
| GTTCAATGGAATTCGTCGGA+TGG | 0.606015 | 7_3:+81664787 | Msa1129700:CDS |
| TCTCCAAACAGTCACAGCAC+AGG | 0.610602 | 7_3:-81663782 | None:intergenic |
| TTGGAAACAACTTATCGTCA+GGG | 0.616900 | 7_3:-81667542 | None:intergenic |
| TTTGAGCGTCATACAAGCCA+CGG | 0.617653 | 7_3:+81667267 | Msa1129700:CDS |
| GATGCAAGGAAGCTAGATAG+AGG | 0.619529 | 7_3:-81664819 | None:intergenic |
| TGAAAGCTTTGCGAGTAAGG+TGG | 0.622790 | 7_3:+81667869 | Msa1129700:CDS |
| TGATTCTGATGAAGAAAGTG+GGG | 0.623371 | 7_3:+81666679 | Msa1129700:CDS |
| TATAGTTCAATGGAATTCGT+CGG | 0.625087 | 7_3:+81664783 | Msa1129700:CDS |
| AAGTTGGACCATGATTCTGA+GGG | 0.625290 | 7_3:+81663825 | Msa1129700:CDS |
| GCATTACCTCCATAAGCTCG+GGG | 0.625307 | 7_3:-81666652 | None:intergenic |
| ATAAGCCGAACAAACGGAAG+CGG | 0.632102 | 7_3:+81667349 | Msa1129700:CDS |
| TTTCTTCTTCGCCTTCGCCG+TGG | 0.634005 | 7_3:-81667284 | None:intergenic |
| CCTAGTTATCGGTTTCACCA+CGG | 0.636645 | 7_3:-81669269 | None:intergenic |
| AACCGAACCAATGATGCGAA+GGG | 0.642463 | 7_3:+81667446 | Msa1129700:CDS |
| AGTTTCTCCCGAGCATGTGG+AGG | 0.643313 | 7_3:+81669221 | Msa1129700:CDS |
| CCAAAACCAAAATTGTTCGA+CGG | 0.647694 | 7_3:+81667665 | Msa1129700:CDS |
| GAAGGCTACAAGTCTTCATG+AGG | 0.648612 | 7_3:+81668654 | Msa1129700:CDS |
| CCTACTCAAGTTTCACATTG+CGG | 0.649142 | 7_3:+81667605 | Msa1129700:CDS |
| ACGGAAGCGGTATAGTTCAG+GGG | 0.673905 | 7_3:+81667362 | Msa1129700:CDS |
| GCAATGTGAAACTTGAGTAG+GGG | 0.678921 | 7_3:-81667603 | None:intergenic |
| CCAGGACCATGACTCAGATG+AGG | 0.678929 | 7_3:+81666712 | Msa1129700:CDS |
| TTACTGACAGCAAGAATGCG+AGG | 0.680912 | 7_3:+81668305 | Msa1129700:intron |
| TACTGCACAAATGGTCAAGG+AGG | 0.683865 | 7_3:-81669119 | None:intergenic |
| GATGCCAGGAAGCTAGAGAG+AGG | 0.686776 | 7_3:-81667408 | None:intergenic |
| TCTCTGACGAAGATTTCACA+AGG | 0.687797 | 7_3:+81665572 | Msa1129700:CDS |
| GAATTGTTAAGGAAAGAGAA+GGG | 0.688056 | 7_3:+81664598 | Msa1129700:CDS |
| GTTGGACCATGATTCTGAGG+GGG | 0.688300 | 7_3:+81663827 | Msa1129700:CDS |
| ATACAGCATTTGGACAACCA+AGG | 0.697734 | 7_3:-81663707 | None:intergenic |
| TGAAAGCTTTGTGAGTAAGG+TGG | 0.703287 | 7_3:+81665277 | Msa1129700:CDS |
| TGTCTATTCAAGGAATACTG+GGG | 0.712241 | 7_3:+81664576 | Msa1129700:CDS |
| ACGGAACCAATGATGCGATG+GGG | 0.713544 | 7_3:+81664858 | Msa1129700:CDS |
| TACAACACAAACAGTCAAGG+AGG | 0.717828 | 7_3:-81666544 | None:intergenic |
| CATTACCTCCATAAGCTCGG+GGG | 0.731541 | 7_3:-81666651 | None:intergenic |
| AGTTGGACCATGATTCTGAG+GGG | 0.732400 | 7_3:+81663826 | Msa1129700:CDS |
| GAAACAACTTGTCATCAGGG+AGG | 0.734503 | 7_3:-81664950 | None:intergenic |
| CTCTGACGAAGATTTCACAA+GGG | 0.735001 | 7_3:+81665573 | Msa1129700:CDS |
| CTCTGATGATGATTTCACAG+AGG | 0.738592 | 7_3:+81668221 | Msa1129700:CDS |
| GAAGGCTACAAGTCTTCACG+AGG | 0.740812 | 7_3:+81665832 | Msa1129700:CDS |
| GATGATTCTGATGAAGACCG+TGG | 0.772080 | 7_3:+81669252 | Msa1129700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATAAAAAATAAAAAGA+TGG | - | chr7_3:81663211-81663230 | None:intergenic | 10.0% |
| !! | TATATATGTTTATTTATTTC+AGG | + | chr7_3:81663317-81663336 | Msa1129700:intron | 10.0% |
| !!! | TGATTTTTTTTTTTTTTTTG+AGG | - | chr7_3:81663608-81663627 | None:intergenic | 10.0% |
| !!! | ATAATTGTTATTCTAATAAA+AGG | - | chr7_3:81666027-81666046 | None:intergenic | 10.0% |
| !!! | AATATGTCACTTTTTTTTTT+TGG | + | chr7_3:81663237-81663256 | Msa1129700:intron | 15.0% |
| !! | CTAAACTTATATAATCAAAT+TGG | + | chr7_3:81664341-81664360 | Msa1129700:intron | 15.0% |
| !! | TATATAATCAAATTGGTATA+CGG | + | chr7_3:81664348-81664367 | Msa1129700:intron | 15.0% |
| !!! | ACAACTTTCTTTTTAAATAT+AGG | - | chr7_3:81664975-81664994 | None:intergenic | 15.0% |
| !!! | TGAATTTTATTATATGTCTA+AGG | - | chr7_3:81666087-81666106 | None:intergenic | 15.0% |
| !! | AGATTAACAAATTTATAAAG+TGG | - | chr7_3:81666220-81666239 | None:intergenic | 15.0% |
| !! | ACATTATCTAAGAATAAATT+TGG | - | chr7_3:81666842-81666861 | None:intergenic | 15.0% |
| !!! | AAGTAGTAAAAATGTTATTT+TGG | - | chr7_3:81668470-81668489 | None:intergenic | 15.0% |
| !! | ATAAATCCAAAAAGATGAAA+AGG | - | chr7_3:81663427-81663446 | None:intergenic | 20.0% |
| !!! | TTAGTATTTTATTTACTTGC+CGG | + | chr7_3:81663449-81663468 | Msa1129700:intron | 20.0% |
| !!! | ACACAACATTTTTAACATTA+TGG | + | chr7_3:81663496-81663515 | Msa1129700:intron | 20.0% |
| !! | AAAGATTATAGAACTAAAGT+TGG | + | chr7_3:81663809-81663828 | Msa1129700:CDS | 20.0% |
| !!! | AAAAAAATTGTTGCTTTTGT+TGG | + | chr7_3:81663984-81664003 | Msa1129700:intron | 20.0% |
| !!! | GTAGAATGAGTTTTAAAAAA+AGG | - | chr7_3:81664068-81664087 | None:intergenic | 20.0% |
| !!! | GCAATTTTATCCAAATATTA+TGG | + | chr7_3:81664200-81664219 | Msa1129700:intron | 20.0% |
| !! | TGTATATTCTTCAATATTGT+TGG | - | chr7_3:81664733-81664752 | None:intergenic | 20.0% |
| !! | AACAATATTGAAGAATATAC+AGG | + | chr7_3:81664732-81664751 | Msa1129700:CDS | 20.0% |
| !! | TCTCATAAATGAATACATTA+AGG | + | chr7_3:81664890-81664909 | Msa1129700:CDS | 20.0% |
| !! | ACTTAATATTTCGCAATATT+TGG | + | chr7_3:81665420-81665439 | Msa1129700:intron | 20.0% |
| !!! | ATTTCTCTTGTTTAACTTTT+AGG | + | chr7_3:81665472-81665491 | Msa1129700:intron | 20.0% |
| !! | CAGTGAAAATATTATTATCA+TGG | + | chr7_3:81665613-81665632 | Msa1129700:intron | 20.0% |
| !!! | AACTTACAACAGTTAATTTT+GGG | - | chr7_3:81665715-81665734 | None:intergenic | 20.0% |
| !!! | ATGTAATCTGTGATTATTTT+TGG | + | chr7_3:81666183-81666202 | Msa1129700:intron | 20.0% |
| !!! | CATATTTTTTTTCTTAAGTC+TGG | + | chr7_3:81666504-81666523 | Msa1129700:intron | 20.0% |
| !! | AAATTGCATTACTAAATGAA+AGG | + | chr7_3:81666570-81666589 | Msa1129700:CDS | 20.0% |
| !! | AATTGCATTACTAAATGAAA+GGG | + | chr7_3:81666571-81666590 | Msa1129700:CDS | 20.0% |
| !! | TAAGTGTATTTAATTGAAGA+TGG | + | chr7_3:81666735-81666754 | Msa1129700:intron | 20.0% |
| !! | ATAGATTGTAGAACAAAATT+TGG | + | chr7_3:81666759-81666778 | Msa1129700:intron | 20.0% |
| !!! | ACATTTGTTTTTTACTTCAA+AGG | + | chr7_3:81666901-81666920 | Msa1129700:intron | 20.0% |
| !!! | TTTTTAACAAAAGACGATAA+AGG | - | chr7_3:81667088-81667107 | None:intergenic | 20.0% |
| !!! | ATGACTTTCTTTTTAAAGAT+TGG | - | chr7_3:81667564-81667583 | None:intergenic | 20.0% |
| !! | CATATTGAGAAATATAAAGT+AGG | - | chr7_3:81668012-81668031 | None:intergenic | 20.0% |
| !!! | ATTTCTCTTGTTTATCTTTT+AGG | + | chr7_3:81668064-81668083 | Msa1129700:intron | 20.0% |
| !!! | ATTTCTCTTGTTTATCTTTT+AGG | + | chr7_3:81668064-81668083 | Msa1129700:intron | 20.0% |
| !! | TCTTCTTCTTAAATATATAG+CGG | + | chr7_3:81668577-81668596 | Msa1129700:intron | 20.0% |
| ! | ATGATGATCAAGAAGAAAAT+TGG | + | chr7_3:81663120-81663139 | Msa1129700:CDS | 25.0% |
| !!! | TGTCACTTTTTTTTTTTGGA+CGG | + | chr7_3:81663241-81663260 | Msa1129700:intron | 25.0% |
| ! | TTTATTTATTTCAGGAACTG+TGG | + | chr7_3:81663325-81663344 | Msa1129700:intron | 25.0% |
| ! | TTGGAATTTACATTAGTTAG+AGG | + | chr7_3:81663750-81663769 | Msa1129700:CDS | 25.0% |
| ! | AACATCAATTAGAACAAGTT+TGG | - | chr7_3:81663888-81663907 | None:intergenic | 25.0% |
| !!! | TTTTTAAGCGAATGTTTGTA+AGG | + | chr7_3:81664019-81664038 | Msa1129700:intron | 25.0% |
| !!! | GAATGAGTTTTAAAAAAAGG+AGG | - | chr7_3:81664065-81664084 | None:intergenic | 25.0% |
| ! | ATTGCATATTTACATGAACA+TGG | - | chr7_3:81664185-81664204 | None:intergenic | 25.0% |
| !! | CATCTAGAATCCATAATATT+TGG | - | chr7_3:81664213-81664232 | None:intergenic | 25.0% |
| ! | CAAATATTATGGATTCTAGA+TGG | + | chr7_3:81664211-81664230 | Msa1129700:intron | 25.0% |
| !!! | CAAGTTCATCTGTTTTTTTT+TGG | + | chr7_3:81664309-81664328 | Msa1129700:intron | 25.0% |
| ! | CCATAAAATGTGTTTATAAG+TGG | - | chr7_3:81664416-81664435 | None:intergenic | 25.0% |
| !! | CCACTTATAAACACATTTTA+TGG | + | chr7_3:81664413-81664432 | Msa1129700:intron | 25.0% |
| ! | ACGATATTCGACTTATATTT+AGG | + | chr7_3:81664465-81664484 | Msa1129700:intron | 25.0% |
| ! | CGATATTCGACTTATATTTA+GGG | + | chr7_3:81664466-81664485 | Msa1129700:intron | 25.0% |
| ! | AACATATGAATGTCTATTCA+AGG | + | chr7_3:81664566-81664585 | Msa1129700:CDS | 25.0% |
| ! | ATAAGCTGAAGAAACATAAT+CGG | + | chr7_3:81664760-81664779 | Msa1129700:CDS | 25.0% |
| ! | CTTGATATTATTGGCATTAA+TGG | - | chr7_3:81665210-81665229 | None:intergenic | 25.0% |
| ! | GTAGATAAGCTTGATATTAT+TGG | - | chr7_3:81665219-81665238 | None:intergenic | 25.0% |
| !! | CAACTTACAACAGTTAATTT+TGG | - | chr7_3:81665716-81665735 | None:intergenic | 25.0% |
| ! | TTCTGATCTATAACAAGTTT+AGG | + | chr7_3:81665933-81665952 | Msa1129700:intron | 25.0% |
| !!! | TTTAGGTTAGATGTATGTTT+TGG | + | chr7_3:81665950-81665969 | Msa1129700:intron | 25.0% |
| ! | CATTTCTATATGATACAAGA+AGG | - | chr7_3:81666350-81666369 | None:intergenic | 25.0% |
| ! | AGAAACTAGAACAATTGTTA+AGG | + | chr7_3:81666612-81666631 | Msa1129700:CDS | 25.0% |
| !!! | TCTTTACCCTTTATTTTGTT+GGG | - | chr7_3:81667246-81667265 | None:intergenic | 25.0% |
| !!! | ATCTTTACCCTTTATTTTGT+TGG | - | chr7_3:81667247-81667266 | None:intergenic | 25.0% |
| ! | GAAAAACAAAATTACTCCAA+TGG | + | chr7_3:81667303-81667322 | Msa1129700:CDS | 25.0% |
| ! | AATTACTCCAATGGAAATAA+AGG | + | chr7_3:81667312-81667331 | Msa1129700:CDS | 25.0% |
| !! | TGAATAACCTTTATTTCCAT+TGG | - | chr7_3:81667322-81667341 | None:intergenic | 25.0% |
| ! | AATGGAAATAAAGGTTATTC+AGG | + | chr7_3:81667321-81667340 | Msa1129700:CDS | 25.0% |
| ! | TCTCATGTTTGAATACATTA+CGG | + | chr7_3:81667479-81667498 | Msa1129700:CDS | 25.0% |
| ! | GAAAAACCTTTGTTGAAAAA+AGG | + | chr7_3:81667744-81667763 | Msa1129700:CDS | 25.0% |
| ! | TCAGAAATGGAAATAGATTT+AGG | - | chr7_3:81668198-81668217 | None:intergenic | 25.0% |
| ! | AGACAATTAATATGTATTCC+AGG | - | chr7_3:81668281-81668300 | None:intergenic | 25.0% |
| !!! | CAACTTACAACAGTTATTTT+CGG | - | chr7_3:81668363-81668382 | None:intergenic | 25.0% |
| !!! | AAAAATGTTTTAGCTTTCGA+AGG | + | chr7_3:81668398-81668417 | Msa1129700:intron | 25.0% |
| !!! | CATTGTTTTAAGTTGTCATT+CGG | + | chr7_3:81668522-81668541 | Msa1129700:intron | 25.0% |
| !! | AACAGCTTCTTATTTATAAC+TGG | + | chr7_3:81668747-81668766 | Msa1129700:intron | 25.0% |
| ! | ATACCAAATTAAGTACAGAA+TGG | - | chr7_3:81668844-81668863 | None:intergenic | 25.0% |
| ! | TTTGAATTTGCAAATAGACT+AGG | - | chr7_3:81668963-81668982 | None:intergenic | 25.0% |
| ! | ATATGACTATAGTACTTTAG+AGG | + | chr7_3:81669069-81669088 | Msa1129700:intron | 25.0% |
| ! | AAATTGCATTACTAGATGAA+AGG | + | chr7_3:81669145-81669164 | Msa1129700:CDS | 25.0% |
| ! | AATTGCATTACTAGATGAAA+GGG | + | chr7_3:81669146-81669165 | Msa1129700:CDS | 25.0% |
| AGATTCTACGGTATCAAAAA+AGG | - | chr7_3:81663389-81663408 | None:intergenic | 30.0% | |
| ! | TTTTTGATACCGTAGAATCT+TGG | + | chr7_3:81663389-81663408 | Msa1129700:CDS | 30.0% |
| ! | TTTTGATACCGTAGAATCTT+GGG | + | chr7_3:81663390-81663409 | Msa1129700:CDS | 30.0% |
| ! | TTGCATGCATTTGTATTTTC+AGG | + | chr7_3:81663639-81663658 | Msa1129700:intron | 30.0% |
| !!! | ATGCATTTGTATTTTCAGGT+AGG | + | chr7_3:81663643-81663662 | Msa1129700:intron | 30.0% |
| ! | CAAAAAGTGTGTTTCTACTT+TGG | + | chr7_3:81663731-81663750 | Msa1129700:CDS | 30.0% |
| GTTTAATCCCTAATTGTCTT+AGG | + | chr7_3:81663905-81663924 | Msa1129700:intron | 30.0% | |
| AACAAGTCCTAAGACAATTA+GGG | - | chr7_3:81663915-81663934 | None:intergenic | 30.0% | |
| TAACAAGTCCTAAGACAATT+AGG | - | chr7_3:81663916-81663935 | None:intergenic | 30.0% | |
| TAAATACTAGTGTCCTATGT+AGG | - | chr7_3:81664116-81664135 | None:intergenic | 30.0% | |
| TCATATTAGACCTACAAAAC+CGG | + | chr7_3:81664371-81664390 | Msa1129700:intron | 30.0% | |
| GTAGAATGGACAAATTTCAT+AGG | - | chr7_3:81664516-81664535 | None:intergenic | 30.0% | |
| !! | TTATTTTGTTCTGCGTAGAA+TGG | - | chr7_3:81664530-81664549 | None:intergenic | 30.0% |
| AATGTCTATTCAAGGAATAC+TGG | + | chr7_3:81664574-81664593 | Msa1129700:CDS | 30.0% | |
| ATGTCTATTCAAGGAATACT+GGG | + | chr7_3:81664575-81664594 | Msa1129700:CDS | 30.0% | |
| GAATTGTTAAGGAAAGAGAA+GGG | + | chr7_3:81664598-81664617 | Msa1129700:CDS | 30.0% | |
| CTTCATAAAATTCACAGTGA+AGG | + | chr7_3:81664681-81664700 | Msa1129700:CDS | 30.0% | |
| ACATAATCGGTATAGTTCAA+TGG | + | chr7_3:81664773-81664792 | Msa1129700:CDS | 30.0% | |
| TATAGTTCAATGGAATTCGT+CGG | + | chr7_3:81664783-81664802 | Msa1129700:CDS | 30.0% | |
| AGGAATTTCTTCTTGTCTTT+GGG | - | chr7_3:81664933-81664952 | None:intergenic | 30.0% | |
| TTTCACATTGCGAAAAATTC+AGG | + | chr7_3:81665026-81665045 | Msa1129700:CDS | 30.0% | |
| AAAAATTCAGGTGATTCATC+TGG | + | chr7_3:81665038-81665057 | Msa1129700:CDS | 30.0% | |
| GGTGATATATGTATAAAACC+TGG | + | chr7_3:81665173-81665192 | Msa1129700:CDS | 30.0% | |
| GAACATGATGAAATGTCTAA+TGG | + | chr7_3:81665499-81665518 | Msa1129700:CDS | 30.0% | |
| TTACGGAAAAAAGTGAAAAC+TGG | + | chr7_3:81665683-81665702 | Msa1129700:CDS | 30.0% | |
| CAGAAAAAATTGAACATCAG+TGG | - | chr7_3:81665918-81665937 | None:intergenic | 30.0% | |
| AAAGGATTGTCTACAGAAAA+TGG | - | chr7_3:81666009-81666028 | None:intergenic | 30.0% | |
| !!! | GGCTATTTTGTTTTACTCAT+TGG | - | chr7_3:81666066-81666085 | None:intergenic | 30.0% |
| AGGAACATATTCATAAAGCA+AGG | - | chr7_3:81666262-81666281 | None:intergenic | 30.0% | |
| !! | ACAAAGACATAATTTGTTGC+GGG | - | chr7_3:81666420-81666439 | None:intergenic | 30.0% |
| !! | GACAAAGACATAATTTGTTG+CGG | - | chr7_3:81666421-81666440 | None:intergenic | 30.0% |
| ! | GTTTTACTACACACATGTAT+GGG | - | chr7_3:81666449-81666468 | None:intergenic | 30.0% |
| TAGTAAAACGTACATGTATC+TGG | + | chr7_3:81666460-81666479 | Msa1129700:intron | 30.0% | |
| !! | AACAATTGTTCTAGTTTCTG+TGG | - | chr7_3:81666611-81666630 | None:intergenic | 30.0% |
| AATGATTCTGATGAAGAAAG+TGG | + | chr7_3:81666677-81666696 | Msa1129700:CDS | 30.0% | |
| ATGATTCTGATGAAGAAAGT+GGG | + | chr7_3:81666678-81666697 | Msa1129700:CDS | 30.0% | |
| AACAAAATTTGGACATGACT+TGG | + | chr7_3:81666770-81666789 | Msa1129700:intron | 30.0% | |
| TAGGGTTTAGTGTATTTACT+TGG | + | chr7_3:81666801-81666820 | Msa1129700:intron | 30.0% | |
| ! | AATGTTTTCATGTTCAGCAA+GGG | - | chr7_3:81666886-81666905 | None:intergenic | 30.0% |
| ! | AAATGTTTTCATGTTCAGCA+AGG | - | chr7_3:81666887-81666906 | None:intergenic | 30.0% |
| TTTATCTTAAAATCATGCCC+AGG | + | chr7_3:81667013-81667032 | Msa1129700:intron | 30.0% | |
| TTTGCAGAACAAAATAAGCT+TGG | + | chr7_3:81667125-81667144 | Msa1129700:intron | 30.0% | |
| TTCCTTGAATAGACATTCAT+GGG | - | chr7_3:81664571-81664590 | None:intergenic | 30.0% | |
| ATTCCTTGAATAGACATTCA+TGG | - | chr7_3:81664572-81664591 | None:intergenic | 30.0% | |
| ATGTCTATTCAAGGAATTTG+AGG | + | chr7_3:81667167-81667186 | Msa1129700:CDS | 30.0% | |
| TATCGATGATGAAACATGTA+TGG | + | chr7_3:81667698-81667717 | Msa1129700:CDS | 30.0% | |
| !!! | GTATCACCTTTTTTCAACAA+AGG | - | chr7_3:81667753-81667772 | None:intergenic | 30.0% |
| TTAATCAATGCAAAACATCC+AGG | - | chr7_3:81667786-81667805 | None:intergenic | 30.0% | |
| ATTCCAATGATCATAAGCTA+AGG | + | chr7_3:81667919-81667938 | Msa1129700:CDS | 30.0% | |
| ATTCCTTAGCTTATGATCAT+TGG | - | chr7_3:81667925-81667944 | None:intergenic | 30.0% | |
| GAACATGATGAAATGTCTAA+TGG | + | chr7_3:81665499-81665518 | Msa1129700:CDS | 30.0% | |
| GAACATGATGAAATGTCTAA+TGG | + | chr7_3:81665499-81665518 | Msa1129700:CDS | 30.0% | |
| GACAACTTAAAACAATGACA+CGG | - | chr7_3:81668519-81668538 | None:intergenic | 30.0% | |
| AGCAATCGAATATGAATACT+CGG | + | chr7_3:81668794-81668813 | Msa1129700:intron | 30.0% | |
| TAGCCATTCTGTACTTAATT+TGG | + | chr7_3:81668838-81668857 | Msa1129700:intron | 30.0% | |
| ! | GTATTGATGTTTGTTACTCA+TGG | + | chr7_3:81668860-81668879 | Msa1129700:intron | 30.0% |
| ! | CAATTTTTGTACTGCACAAA+TGG | - | chr7_3:81669131-81669150 | None:intergenic | 30.0% |
| AGAAACAAGAACAACTGTTA+AGG | + | chr7_3:81669187-81669206 | Msa1129700:CDS | 30.0% | |
| CAAAAGAAAACAACCTGAAC+CGG | + | chr7_3:81663091-81663110 | Msa1129700:CDS | 35.0% | |
| TCTTGATCATCATCATCAAC+CGG | - | chr7_3:81663113-81663132 | None:intergenic | 35.0% | |
| !! | TGGTGTTTTGAATGCAAAGA+TGG | + | chr7_3:81663140-81663159 | Msa1129700:CDS | 35.0% |
| !! | TGTTTTGAATGCAAAGATGG+TGG | + | chr7_3:81663143-81663162 | Msa1129700:CDS | 35.0% |
| TGTTACCACTTTCTTCTTGA+TGG | + | chr7_3:81663268-81663287 | Msa1129700:intron | 35.0% | |
| TATGACCATCAAGAAGAAAG+TGG | - | chr7_3:81663276-81663295 | None:intergenic | 35.0% | |
| ! | GGTAAGCCTTTTCATCTTTT+TGG | + | chr7_3:81663418-81663437 | Msa1129700:intron | 35.0% |
| !! | CTTTCAAGTTTGCATGAAAC+CGG | - | chr7_3:81663471-81663490 | None:intergenic | 35.0% |
| !! | CACTTTTTGCATACAGCATT+TGG | - | chr7_3:81663720-81663739 | None:intergenic | 35.0% |
| !! | ACATTAGTTAGAGGTGTTCA+AGG | + | chr7_3:81663759-81663778 | Msa1129700:CDS | 35.0% |
| TTAAGCGAATGTTTGTAAGG+TGG | + | chr7_3:81664022-81664041 | Msa1129700:intron | 35.0% | |
| ! | ACAGATGAACTTGACAGTTT+TGG | - | chr7_3:81664302-81664321 | None:intergenic | 35.0% |
| TACGCAGAACAAAATAACCT+TGG | + | chr7_3:81664533-81664552 | Msa1129700:intron | 35.0% | |
| TGTCTATTCAAGGAATACTG+GGG | + | chr7_3:81664576-81664595 | Msa1129700:CDS | 35.0% | |
| GGAATTGTTAAGGAAAGAGA+AGG | + | chr7_3:81664597-81664616 | Msa1129700:CDS | 35.0% | |
| TCTTTACCCTTTCGATAGTT+GGG | - | chr7_3:81664654-81664673 | None:intergenic | 35.0% | |
| ATCTTTACCCTTTCGATAGT+TGG | - | chr7_3:81664655-81664674 | None:intergenic | 35.0% | |
| ATCCATAGGGAGATACAAAA+CGG | + | chr7_3:81664839-81664858 | Msa1129700:CDS | 35.0% | |
| ! | ATTTCTTCTTGTCTTTGGGA+TGG | - | chr7_3:81664929-81664948 | None:intergenic | 35.0% |
| GAGGAATTTCTTCTTGTCTT+TGG | - | chr7_3:81664934-81664953 | None:intergenic | 35.0% | |
| TAGGAAACAACTTGTCATCA+GGG | - | chr7_3:81664956-81664975 | None:intergenic | 35.0% | |
| ATAGGAAACAACTTGTCATC+AGG | - | chr7_3:81664957-81664976 | None:intergenic | 35.0% | |
| AACAAATTGTTCGACAGACA+AGG | + | chr7_3:81665082-81665101 | Msa1129700:CDS | 35.0% | |
| ! | ATATCACCTTTTCTCAACAG+AGG | - | chr7_3:81665161-81665180 | None:intergenic | 35.0% |
| ! | TTAATGGATGCAAAACATCC+AGG | - | chr7_3:81665194-81665213 | None:intergenic | 35.0% |
| TATCTACCTAAAACGAAGCT+TGG | + | chr7_3:81665232-81665251 | Msa1129700:CDS | 35.0% | |
| !! | ATTCCTTAGCTTGTGATCAT+TGG | - | chr7_3:81665333-81665352 | None:intergenic | 35.0% |
| TATCATCTTGTGAGAGTCAT+AGG | + | chr7_3:81665356-81665375 | Msa1129700:CDS | 35.0% | |
| TCAGAGATGGAAATAGCTTT+AGG | - | chr7_3:81665550-81665569 | None:intergenic | 35.0% | |
| TTACTTACAGCAAGATTGTG+AGG | + | chr7_3:81665658-81665677 | Msa1129700:intron | 35.0% | |
| AGCAAGATTGTGAGGATTTA+CGG | + | chr7_3:81665666-81665685 | Msa1129700:intron | 35.0% | |
| TGTAAGTTGCATGATACATG+TGG | + | chr7_3:81665727-81665746 | Msa1129700:intron | 35.0% | |
| !!! | TTAACTTCTTTTTTCCCTGC+TGG | + | chr7_3:81665786-81665805 | Msa1129700:intron | 35.0% |
| TATGAATATGTTCCTGCTAG+TGG | + | chr7_3:81666267-81666286 | Msa1129700:intron | 35.0% | |
| TTTGAATCTGCAAGTAGACT+AGG | - | chr7_3:81666304-81666323 | None:intergenic | 35.0% | |
| ! | CGTTTTACTACACACATGTA+TGG | - | chr7_3:81666450-81666469 | None:intergenic | 35.0% |
| TTGTACAACACAAACAGTCA+AGG | - | chr7_3:81666550-81666569 | None:intergenic | 35.0% | |
| TGATTCTGATGAAGAAAGTG+GGG | + | chr7_3:81666679-81666698 | Msa1129700:CDS | 35.0% | |
| ! | AAATTTGGACATGACTTGGA+TGG | + | chr7_3:81666774-81666793 | Msa1129700:intron | 35.0% |
| ! | AATTTGGACATGACTTGGAT+GGG | + | chr7_3:81666775-81666794 | Msa1129700:intron | 35.0% |
| ! | GCAAGGGCATAAAACAATTA+TGG | - | chr7_3:81666870-81666889 | None:intergenic | 35.0% |
| CAGAACAAAATAAGCTTGGA+TGG | + | chr7_3:81667129-81667148 | Msa1129700:intron | 35.0% | |
| AACCCATGAATGTCTATTCA+AGG | + | chr7_3:81667158-81667177 | Msa1129700:CDS | 35.0% | |
| GGAATTTGAGGAAAATGTTG+AGG | + | chr7_3:81667179-81667198 | Msa1129700:CDS | 35.0% | |
| GAAAATGTTGAGGTGAGAAA+AGG | + | chr7_3:81667189-81667208 | Msa1129700:CDS | 35.0% | |
| TGCACTTCCCAACAAAATAA+AGG | + | chr7_3:81667236-81667255 | Msa1129700:CDS | 35.0% | |
| GCACTTCCCAACAAAATAAA+GGG | + | chr7_3:81667237-81667256 | Msa1129700:CDS | 35.0% | |
| TTGGAAACAACTTATCGTCA+GGG | - | chr7_3:81667545-81667564 | None:intergenic | 35.0% | |
| ATTGGAAACAACTTATCGTC+AGG | - | chr7_3:81667546-81667565 | None:intergenic | 35.0% | |
| CCAAAACCAAAATTGTTCGA+CGG | + | chr7_3:81667665-81667684 | Msa1129700:CDS | 35.0% | |
| ATGATCATTGGAATCTACTC+TGG | - | chr7_3:81667913-81667932 | None:intergenic | 35.0% | |
| TATCATGTTGTGAGAGTCAT+AGG | + | chr7_3:81667948-81667967 | Msa1129700:CDS | 35.0% | |
| GGAAATAGATTTAGGCATGA+AGG | - | chr7_3:81668190-81668209 | None:intergenic | 35.0% | |
| ! | GCAGTGAAACTATATTTTCC+TGG | + | chr7_3:81668260-81668279 | Msa1129700:intron | 35.0% |
| !! | AGTTATTTTCGGAAACAAGC+CGG | - | chr7_3:81668352-81668371 | None:intergenic | 35.0% |
| !!! | AACTACTTTGTTTTCCCTGT+TGG | + | chr7_3:81668608-81668627 | Msa1129700:intron | 35.0% |
| !!! | CTGGCTGTGATTTATTTTTG+TGG | + | chr7_3:81668766-81668785 | Msa1129700:intron | 35.0% |
| GCAATCGAATATGAATACTC+GGG | + | chr7_3:81668795-81668814 | Msa1129700:intron | 35.0% | |
| TACAGAATGGCTAAAGTATG+TGG | - | chr7_3:81668831-81668850 | None:intergenic | 35.0% | |
| TATGAATGTCTTTCTGCTAG+TGG | + | chr7_3:81668926-81668945 | Msa1129700:intron | 35.0% | |
| ! | ATTCTTTATTTCGTCCTCTG+AGG | - | chr7_3:81668999-81669018 | None:intergenic | 35.0% |
| GATTTCTATATGACGCAAGA+AGG | - | chr7_3:81669024-81669043 | None:intergenic | 35.0% | |
| !! | AACAGTTGTTCTTGTTTCTG+TGG | - | chr7_3:81669186-81669205 | None:intergenic | 35.0% |
| ! | ATATTTTACCTCCACATGCT+CGG | - | chr7_3:81669232-81669251 | None:intergenic | 35.0% |
| GCTTATCATCCTGATTGTGT+TGG | + | chr7_3:81663352-81663371 | Msa1129700:CDS | 40.0% | |
| TCATCCTGATTGTGTTGGAA+AGG | + | chr7_3:81663357-81663376 | Msa1129700:CDS | 40.0% | |
| TCATCCTTTCCAACACAATC+AGG | - | chr7_3:81663364-81663383 | None:intergenic | 40.0% | |
| ACCACAAACCCAAGATTCTA+CGG | - | chr7_3:81663401-81663420 | None:intergenic | 40.0% | |
| ATACAGCATTTGGACAACCA+AGG | - | chr7_3:81663710-81663729 | None:intergenic | 40.0% | |
| AAAGTTGGACCATGATTCTG+AGG | + | chr7_3:81663824-81663843 | Msa1129700:CDS | 40.0% | |
| AAGTTGGACCATGATTCTGA+GGG | + | chr7_3:81663825-81663844 | Msa1129700:CDS | 40.0% | |
| GGGTAGGTGTGATAATAACT+TGG | + | chr7_3:81663847-81663866 | Msa1129700:intron | 40.0% | |
| ATCGTATAAAGACCCCTCAT+TGG | - | chr7_3:81664450-81664469 | None:intergenic | 40.0% | |
| ATATGTTTCTCTGTCGTCCA+AGG | - | chr7_3:81664553-81664572 | None:intergenic | 40.0% | |
| GGAATACTGGGGAATTGTTA+AGG | + | chr7_3:81664587-81664606 | Msa1129700:CDS | 40.0% | |
| TTCAATGGAATTCGTCGGAT+GGG | + | chr7_3:81664788-81664807 | Msa1129700:CDS | 40.0% | |
| ! | TTCCGTTTTGTATCTCCCTA+TGG | - | chr7_3:81664844-81664863 | None:intergenic | 40.0% |
| TTCAGGTGATTCATCTGGAA+AGG | + | chr7_3:81665043-81665062 | Msa1129700:CDS | 40.0% | |
| TATCGATGATCAGACATGTC+TGG | + | chr7_3:81665106-81665125 | Msa1129700:CDS | 40.0% | |
| AGCCAATTGTCCAGCTTAAT+AGG | + | chr7_3:81665131-81665150 | Msa1129700:CDS | 40.0% | |
| GTCCTATTAAGCTGGACAAT+TGG | - | chr7_3:81665136-81665155 | None:intergenic | 40.0% | |
| ! | GCATGAAAGCTTTGTGAGTA+AGG | + | chr7_3:81665274-81665293 | Msa1129700:CDS | 40.0% |
| ! | TGAAAGCTTTGTGAGTAAGG+TGG | + | chr7_3:81665277-81665296 | Msa1129700:CDS | 40.0% |
| ACTCCAATGATCACAAGCTA+AGG | + | chr7_3:81665327-81665346 | Msa1129700:CDS | 40.0% | |
| !! | GGAAATAGCTTTAGGCATGA+GGG | - | chr7_3:81665542-81665561 | None:intergenic | 40.0% |
| !! | TGGAAATAGCTTTAGGCATG+AGG | - | chr7_3:81665543-81665562 | None:intergenic | 40.0% |
| TCTCTGACGAAGATTTCACA+AGG | + | chr7_3:81665572-81665591 | Msa1129700:CDS | 40.0% | |
| CTCTGACGAAGATTTCACAA+GGG | + | chr7_3:81665573-81665592 | Msa1129700:CDS | 40.0% | |
| TACAACACAAACAGTCAAGG+AGG | - | chr7_3:81666547-81666566 | None:intergenic | 40.0% | |
| ATGCATTACCTCCATAAGCT+CGG | - | chr7_3:81666657-81666676 | None:intergenic | 40.0% | |
| ! | ACATGACTTGGATGGGATTT+AGG | + | chr7_3:81666782-81666801 | Msa1129700:intron | 40.0% |
| ! | CATGACTTGGATGGGATTTA+GGG | + | chr7_3:81666783-81666802 | Msa1129700:intron | 40.0% |
| TGGATATTGCATATCTGCCT+GGG | - | chr7_3:81667033-81667052 | None:intergenic | 40.0% | |
| TTGGATATTGCATATCTGCC+TGG | - | chr7_3:81667034-81667053 | None:intergenic | 40.0% | |
| GTATGCATAAGCCGAACAAA+CGG | + | chr7_3:81667343-81667362 | Msa1129700:CDS | 40.0% | |
| TATAGTTCAGGGGAATTCGT+TGG | + | chr7_3:81667372-81667391 | Msa1129700:CDS | 40.0% | |
| TTTACATCCCTTCGCATCAT+TGG | - | chr7_3:81667456-81667475 | None:intergenic | 40.0% | |
| GCAATGTGAAACTTGAGTAG+GGG | - | chr7_3:81667606-81667625 | None:intergenic | 40.0% | |
| CGCAATGTGAAACTTGAGTA+GGG | - | chr7_3:81667607-81667626 | None:intergenic | 40.0% | |
| CCTACTCAAGTTTCACATTG+CGG | + | chr7_3:81667605-81667624 | Msa1129700:CDS | 40.0% | |
| GTTTCACATTGCGGAAAGAT+CGG | + | chr7_3:81667614-81667633 | Msa1129700:CDS | 40.0% | |
| !!! | CCGTCGAACAATTTTGGTTT+TGG | - | chr7_3:81667668-81667687 | None:intergenic | 40.0% |
| ! | TGTTGTCCGTCGAACAATTT+TGG | - | chr7_3:81667674-81667693 | None:intergenic | 40.0% |
| GGTGATACGTGTATAAAACC+TGG | + | chr7_3:81667765-81667784 | Msa1129700:CDS | 40.0% | |
| TATCTACCTAAAGCGAAGCT+TGG | + | chr7_3:81667824-81667843 | Msa1129700:CDS | 40.0% | |
| ATCATCAGAGAGCTCAGAAA+TGG | - | chr7_3:81668211-81668230 | None:intergenic | 40.0% | |
| ! | CTCTGATGATGATTTCACAG+AGG | + | chr7_3:81668221-81668240 | Msa1129700:CDS | 40.0% |
| !! | TTTGTTTTCCCTGTTGGCAT+TGG | + | chr7_3:81668614-81668633 | Msa1129700:intron | 40.0% |
| AAGAAGCTGTTGAGCAATAG+TGG | - | chr7_3:81668738-81668757 | None:intergenic | 40.0% | |
| TTGTACTGCACAAATGGTCA+AGG | - | chr7_3:81669125-81669144 | None:intergenic | 40.0% | |
| ! | TATTTTACCTCCACATGCTC+GGG | - | chr7_3:81669231-81669250 | None:intergenic | 40.0% |
| ! | TCATCATCATCAACCGGTTC+AGG | - | chr7_3:81663107-81663126 | None:intergenic | 45.0% |
| ACCGTAGAATCTTGGGTTTG+TGG | + | chr7_3:81663397-81663416 | Msa1129700:CDS | 45.0% | |
| !!! | CGCTCTAAGTTTTGTTGCCT+TGG | + | chr7_3:81663690-81663709 | Msa1129700:CDS | 45.0% |
| AGTTGGACCATGATTCTGAG+GGG | + | chr7_3:81663826-81663845 | Msa1129700:CDS | 45.0% | |
| AGCGAATGTTTGTAAGGTGG+CGG | + | chr7_3:81664025-81664044 | Msa1129700:intron | 45.0% | |
| AGTGTCCTATGTAGGTACCT+CGG | - | chr7_3:81664108-81664127 | None:intergenic | 45.0% | |
| ATAATTCCCACCTTACAGGC+CGG | - | chr7_3:81664393-81664412 | None:intergenic | 45.0% | |
| GTGGATAATTCCCACCTTAC+AGG | - | chr7_3:81664397-81664416 | None:intergenic | 45.0% | |
| TGGTCACATCACATCCAATG+AGG | + | chr7_3:81664433-81664452 | Msa1129700:intron | 45.0% | |
| GGTCACATCACATCCAATGA+GGG | + | chr7_3:81664434-81664453 | Msa1129700:intron | 45.0% | |
| GTCACATCACATCCAATGAG+GGG | + | chr7_3:81664435-81664454 | Msa1129700:intron | 45.0% | |
| GTTCAATGGAATTCGTCGGA+TGG | + | chr7_3:81664787-81664806 | Msa1129700:CDS | 45.0% | |
| GATGCAAGGAAGCTAGATAG+AGG | - | chr7_3:81664822-81664841 | None:intergenic | 45.0% | |
| ! | TCTAGCTTCCTTGCATCCAT+AGG | + | chr7_3:81664825-81664844 | Msa1129700:CDS | 45.0% |
| CTAGCTTCCTTGCATCCATA+GGG | + | chr7_3:81664826-81664845 | Msa1129700:CDS | 45.0% | |
| TGTATCTCCCTATGGATGCA+AGG | - | chr7_3:81664836-81664855 | None:intergenic | 45.0% | |
| AAACGGAACCAATGATGCGA+TGG | + | chr7_3:81664856-81664875 | Msa1129700:CDS | 45.0% | |
| AACGGAACCAATGATGCGAT+GGG | + | chr7_3:81664857-81664876 | Msa1129700:CDS | 45.0% | |
| CTTATTCCCCATCGCATCAT+TGG | - | chr7_3:81664867-81664886 | None:intergenic | 45.0% | |
| GAAACAACTTGTCATCAGGG+AGG | - | chr7_3:81664953-81664972 | None:intergenic | 45.0% | |
| CAGAGGTTGTCCTATTAAGC+TGG | - | chr7_3:81665144-81665163 | None:intergenic | 45.0% | |
| GGACAACCTCTGTTGAGAAA+AGG | + | chr7_3:81665152-81665171 | Msa1129700:CDS | 45.0% | |
| ! | CGAACACCAAGCTTCGTTTT+AGG | - | chr7_3:81665241-81665260 | None:intergenic | 45.0% |
| ! | AGCTTTGTGAGTAAGGTGGT+TGG | + | chr7_3:81665281-81665300 | Msa1129700:CDS | 45.0% |
| GTGATCATTGGAGTCTACTC+TGG | - | chr7_3:81665321-81665340 | None:intergenic | 45.0% | |
| !!! | TCTTTTTTCCCTGCTGGCAT+TGG | + | chr7_3:81665792-81665811 | Msa1129700:intron | 45.0% |
| GAAGGAGGATCTTCAAGAGA+AGG | + | chr7_3:81665814-81665833 | Msa1129700:intron | 45.0% | |
| TGCATTACCTCCATAAGCTC+GGG | - | chr7_3:81666656-81666675 | None:intergenic | 45.0% | |
| CACTTACCTCATCTGAGTCA+TGG | - | chr7_3:81666721-81666740 | None:intergenic | 45.0% | |
| TTTGAGCGTCATACAAGCCA+CGG | + | chr7_3:81667267-81667286 | Msa1129700:CDS | 45.0% | |
| ATAAGCCGAACAAACGGAAG+CGG | + | chr7_3:81667349-81667368 | Msa1129700:CDS | 45.0% | |
| CTATACCGCTTCCGTTTGTT+CGG | - | chr7_3:81667357-81667376 | None:intergenic | 45.0% | |
| AAACGGAAGCGGTATAGTTC+AGG | + | chr7_3:81667360-81667379 | Msa1129700:CDS | 45.0% | |
| AACGGAAGCGGTATAGTTCA+GGG | + | chr7_3:81667361-81667380 | Msa1129700:CDS | 45.0% | |
| TTCAGGGGAATTCGTTGGAT+GGG | + | chr7_3:81667377-81667396 | Msa1129700:CDS | 45.0% | |
| ! | TCTAGCTTCCTGGCATCTAT+AGG | + | chr7_3:81667414-81667433 | Msa1129700:CDS | 45.0% |
| CTAGCTTCCTGGCATCTATA+GGG | + | chr7_3:81667415-81667434 | Msa1129700:CDS | 45.0% | |
| CATATCTCCCTATAGATGCC+AGG | - | chr7_3:81667425-81667444 | None:intergenic | 45.0% | |
| AAACCGAACCAATGATGCGA+AGG | + | chr7_3:81667445-81667464 | Msa1129700:CDS | 45.0% | |
| AACCGAACCAATGATGCGAA+GGG | + | chr7_3:81667446-81667465 | Msa1129700:CDS | 45.0% | |
| ! | ATCCCTTCGCATCATTGGTT+CGG | - | chr7_3:81667451-81667470 | None:intergenic | 45.0% |
| CCGCAATGTGAAACTTGAGT+AGG | - | chr7_3:81667608-81667627 | None:intergenic | 45.0% | |
| TGCGGAAAGATCGGTTGATT+CGG | + | chr7_3:81667623-81667642 | Msa1129700:CDS | 45.0% | |
| ACCTTACTCGCAAAGCTTTC+AGG | - | chr7_3:81667870-81667889 | None:intergenic | 45.0% | |
| TGAAAGCTTTGCGAGTAAGG+TGG | + | chr7_3:81667869-81667888 | Msa1129700:CDS | 45.0% | |
| TTACTGACAGCAAGAATGCG+AGG | + | chr7_3:81668305-81668324 | Msa1129700:intron | 45.0% | |
| AGCAAGAATGCGAGGATTTG+CGG | + | chr7_3:81668313-81668332 | Msa1129700:intron | 45.0% | |
| TTGCGGCAAAAAGTGAACAC+CGG | + | chr7_3:81668330-81668349 | Msa1129700:CDS | 45.0% | |
| GAAGGCTACAAGTCTTCATG+AGG | + | chr7_3:81668654-81668673 | Msa1129700:CDS | 45.0% | |
| TACTGCACAAATGGTCAAGG+AGG | - | chr7_3:81669122-81669141 | None:intergenic | 45.0% | |
| GATGATTCTGATGAAGACCG+TGG | + | chr7_3:81669252-81669271 | Msa1129700:CDS | 45.0% | |
| TCTCCAAACAGTCACAGCAC+AGG | - | chr7_3:81663785-81663804 | None:intergenic | 50.0% | |
| ! | GTTGGACCATGATTCTGAGG+GGG | + | chr7_3:81663827-81663846 | Msa1129700:CDS | 50.0% |
| GTGTCCTATGTAGGTACCTC+GGG | - | chr7_3:81664107-81664126 | None:intergenic | 50.0% | |
| ACCTACAAAACCGGCCTGTA+AGG | + | chr7_3:81664380-81664399 | Msa1129700:intron | 50.0% | |
| !! | ACCTTACAGGCCGGTTTTGT+AGG | - | chr7_3:81664384-81664403 | None:intergenic | 50.0% |
| TACAAAACCGGCCTGTAAGG+TGG | + | chr7_3:81664383-81664402 | Msa1129700:intron | 50.0% | |
| ACAAAACCGGCCTGTAAGGT+GGG | + | chr7_3:81664384-81664403 | Msa1129700:intron | 50.0% | |
| TGCACTGCCCAACTATCGAA+AGG | + | chr7_3:81664644-81664663 | Msa1129700:CDS | 50.0% | |
| GCACTGCCCAACTATCGAAA+GGG | + | chr7_3:81664645-81664664 | Msa1129700:CDS | 50.0% | |
| ACGGAACCAATGATGCGATG+GGG | + | chr7_3:81664858-81664877 | Msa1129700:CDS | 50.0% | |
| TTCGTCAGAGAGCTCAGAGA+TGG | - | chr7_3:81665563-81665582 | None:intergenic | 50.0% | |
| !! | TTTTCCCTGCTGGCATTGGA+AGG | + | chr7_3:81665796-81665815 | Msa1129700:intron | 50.0% |
| GAAGGCTACAAGTCTTCACG+AGG | + | chr7_3:81665832-81665851 | Msa1129700:CDS | 50.0% | |
| CTACACACATGTATGGGTCG+CGG | - | chr7_3:81666443-81666462 | None:intergenic | 50.0% | |
| ATAAGCTCGGGGGAAACTGA+TGG | - | chr7_3:81666644-81666663 | None:intergenic | 50.0% | |
| ATCAGTTTCCCCCGAGCTTA+TGG | + | chr7_3:81666643-81666662 | Msa1129700:CDS | 50.0% | |
| CATTACCTCCATAAGCTCGG+GGG | - | chr7_3:81666654-81666673 | None:intergenic | 50.0% | |
| GCATTACCTCCATAAGCTCG+GGG | - | chr7_3:81666655-81666674 | None:intergenic | 50.0% | |
| AAGTGGGGAAACAGATAGCC+AGG | + | chr7_3:81666694-81666713 | Msa1129700:CDS | 50.0% | |
| ACGGAAGCGGTATAGTTCAG+GGG | + | chr7_3:81667362-81667381 | Msa1129700:CDS | 50.0% | |
| GTTCAGGGGAATTCGTTGGA+TGG | + | chr7_3:81667376-81667395 | Msa1129700:CDS | 50.0% | |
| GAATTCGTTGGATGGGCATC+AGG | + | chr7_3:81667384-81667403 | Msa1129700:CDS | 50.0% | |
| !! | GAAAGATCGGTTGATTCGGC+TGG | + | chr7_3:81667627-81667646 | Msa1129700:CDS | 50.0% |
| !! | ATCGGTTGATTCGGCTGGAA+AGG | + | chr7_3:81667632-81667651 | Msa1129700:CDS | 50.0% |
| CGAACACCAAGCTTCGCTTT+AGG | - | chr7_3:81667833-81667852 | None:intergenic | 50.0% | |
| GCCTGAAAGCTTTGCGAGTA+AGG | + | chr7_3:81667866-81667885 | Msa1129700:CDS | 50.0% | |
| AGCTTTGCGAGTAAGGTGGT+TGG | + | chr7_3:81667873-81667892 | Msa1129700:CDS | 50.0% | |
| !!! | TTTTCCCTGTTGGCATTGGC+AGG | + | chr7_3:81668618-81668637 | Msa1129700:intron | 50.0% |
| GCAGGTGGATCTTCAAGAGA+AGG | + | chr7_3:81668636-81668655 | Msa1129700:intron | 50.0% | |
| ACATGCTCGGGAGAAACTGA+TGG | - | chr7_3:81669219-81669238 | None:intergenic | 50.0% | |
| ATCAGTTTCTCCCGAGCATG+TGG | + | chr7_3:81669218-81669237 | Msa1129700:CDS | 50.0% | |
| AGGCCTGTGCTGTGACTGTT+TGG | + | chr7_3:81663779-81663798 | Msa1129700:CDS | 55.0% | |
| ! | GACCATGATTCTGAGGGGGT+AGG | + | chr7_3:81663831-81663850 | Msa1129700:intron | 55.0% |
| CACCTACCCCCTCAGAATCA+TGG | - | chr7_3:81663836-81663855 | None:intergenic | 55.0% | |
| ! | ACCACCCGAGGTACCTACAT+AGG | + | chr7_3:81664100-81664119 | Msa1129700:intron | 55.0% |
| TCCTATGTAGGTACCTCGGG+TGG | - | chr7_3:81664104-81664123 | None:intergenic | 55.0% | |
| TCCTCCTTCCAATGCCAGCA+GGG | - | chr7_3:81665803-81665822 | None:intergenic | 55.0% | |
| ATCCTCCTTCCAATGCCAGC+AGG | - | chr7_3:81665804-81665823 | None:intergenic | 55.0% | |
| AGTTTCCCCCGAGCTTATGG+AGG | + | chr7_3:81666646-81666665 | Msa1129700:CDS | 55.0% | |
| CCTCATCTGAGTCATGGTCC+TGG | - | chr7_3:81666715-81666734 | None:intergenic | 55.0% | |
| CCAGGACCATGACTCAGATG+AGG | + | chr7_3:81666712-81666731 | Msa1129700:CDS | 55.0% | |
| TTTCTTCTTCGCCTTCGCCG+TGG | - | chr7_3:81667287-81667306 | None:intergenic | 55.0% | |
| ! | AGGACCTCTCTCTAGCTTCC+TGG | + | chr7_3:81667404-81667423 | Msa1129700:CDS | 55.0% |
| GATGCCAGGAAGCTAGAGAG+AGG | - | chr7_3:81667411-81667430 | None:intergenic | 55.0% | |
| ATTCGGCGACTATCGCGACA+CGG | + | chr7_3:81668539-81668558 | Msa1129700:intron | 55.0% | |
| TCCACCTGCCAATGCCAACA+GGG | - | chr7_3:81668625-81668644 | None:intergenic | 55.0% | |
| ATCCACCTGCCAATGCCAAC+AGG | - | chr7_3:81668626-81668645 | None:intergenic | 55.0% | |
| ATTGAGCGTGCAAGCCTCAG+AGG | + | chr7_3:81668982-81669001 | Msa1129700:intron | 55.0% | |
| AGTTTCTCCCGAGCATGTGG+AGG | + | chr7_3:81669221-81669240 | Msa1129700:CDS | 55.0% | |
| GTCACTTAGCTCACCACCCG+AGG | + | chr7_3:81664088-81664107 | Msa1129700:intron | 60.0% | |
| ! | TCCCTGCTGGCATTGGAAGG+AGG | + | chr7_3:81665799-81665818 | Msa1129700:intron | 60.0% |
| CGTCATACAAGCCACGGCGA+AGG | + | chr7_3:81667273-81667292 | Msa1129700:CDS | 60.0% | |
| !! | TCCCTGTTGGCATTGGCAGG+TGG | + | chr7_3:81668621-81668640 | Msa1129700:intron | 60.0% |
| GCGCGTCGCAATCCACTAGC+AGG | - | chr7_3:81666282-81666301 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 81663068 | 81669290 | 81663068 | ID=Msa1129700;Name=Msa1129700 |
| chr7_3 | mRNA | 81663068 | 81669290 | 81663068 | ID=Msa1129700-mRNA-1;Parent=Msa1129700;Name=Msa1129700-mRNA-1;_AED=0.16;_eAED=0.19;_QI=0|0.16|0.07|0.53|1|1|13|0|951 |
| chr7_3 | exon | 81663068 | 81663189 | 81663068 | ID=Msa1129700-mRNA-1:exon:23814;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81663339 | 81663418 | 81663339 | ID=Msa1129700-mRNA-1:exon:23815;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81663661 | 81663848 | 81663661 | ID=Msa1129700-mRNA-1:exon:23816;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81664540 | 81665377 | 81664540 | ID=Msa1129700-mRNA-1:exon:23817;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81665494 | 81665594 | 81665494 | ID=Msa1129700-mRNA-1:exon:23818;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81665668 | 81665727 | 81665668 | ID=Msa1129700-mRNA-1:exon:23819;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81665818 | 81665868 | 81665818 | ID=Msa1129700-mRNA-1:exon:23820;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81666542 | 81666733 | 81666542 | ID=Msa1129700-mRNA-1:exon:23821;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81667132 | 81667969 | 81667132 | ID=Msa1129700-mRNA-1:exon:23822;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81668142 | 81668242 | 81668142 | ID=Msa1129700-mRNA-1:exon:23823;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81668315 | 81668374 | 81668315 | ID=Msa1129700-mRNA-1:exon:23824;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81668640 | 81668690 | 81668640 | ID=Msa1129700-mRNA-1:exon:23825;Parent=Msa1129700-mRNA-1 |
| chr7_3 | exon | 81669117 | 81669290 | 81669117 | ID=Msa1129700-mRNA-1:exon:23826;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81663068 | 81663189 | 81663068 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81663339 | 81663418 | 81663339 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81663661 | 81663848 | 81663661 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81664540 | 81665377 | 81664540 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81665494 | 81665594 | 81665494 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81665668 | 81665727 | 81665668 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81665818 | 81665868 | 81665818 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81666542 | 81666733 | 81666542 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81667132 | 81667969 | 81667132 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81668142 | 81668242 | 81668142 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81668315 | 81668374 | 81668315 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81668640 | 81668690 | 81668640 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| chr7_3 | CDS | 81669117 | 81669290 | 81669117 | ID=Msa1129700-mRNA-1:cds;Parent=Msa1129700-mRNA-1 |
| Gene Sequence |
| Protein sequence |